.008694
.000000
.000000
.000000
.008694
.000000
.000000
.000000
.008501
.00000
.00000
.00000
Goetz, D.H.
Willie, S.T.
Armen, R.S.
Bratt, T.
Borregaard, N.
Strong, R.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
115.021
115.021
117.638
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
39
1935
1941
10.1021/bi992215v
10684642
Ligand preference inferred from the structure of neutrophil gelatinase associated lipocalin
2000
NAG B 178 HAS WRONG CHIRALITY AT ATOM C1
1.000000
.000000
.000000
.000000
1.000000
.000000
.000000
.000000
1.000000
.00000
.00000
.00000
100.0
1
CCD
1998-08-09
SINGLE WAVELENGTH
M
x-ray
1
0.98
1.0
5.0.2
ALS
0.98
SYNCHROTRON
ALS BEAMLINE 5.0.2
20515.449
HUMAN NEUTROPHIL GELATINASE
2
man
polymer
424.401
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
96.063
SULFATE ION
3
syn
non-polymer
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
non-polymer
18.015
water
133
nat
water
NGAL
no
no
QDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWI
RTFVPGCQPGEFTLGNIKSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLG
LPENHIVFPVPIDQCID
QDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWI
RTFVPGCQPGEFTLGNIKSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLG
LPENHIVFPVPIDQCID
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
Homo sapiens
10469
unidentified baculovirus
1
4.74
74.04
VAPOR DIFFUSION, HANGING DROP
7.0
PEG 8k, Ammonium Sulfate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
298.0
atom_site
chem_comp
database_PDB_caveat
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_special_symmetry
pdbx_validate_chiral
struct_asym
struct_conn
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Atomic model
Advisory
Atomic model
Data collection
Derived calculations
Non-polymer description
Structure summary
1
0
2000-03-06
1
1
2008-04-27
1
2
2011-07-13
1
3
2011-11-16
2
0
2020-07-29
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.type_symbol
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_special_symmetry.label_asym_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
A
NAG
179
n
C
NAG
1
A
NAG
180
n
C
NAG
2
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
Crystal Structure of Human Neutrophil Gelatinase Associated Lipocalin Homodimer
RCSB
Y
RCSB
1999-11-22
REL
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1
2
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}
2
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
2
O1
HO4
sing
n
n
SO4
SULFATE ION
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
HOH
water
SO4
181
3
SO4
SO4
181
A
SO4
183
3
SO4
SO4
183
A
NAG
178
4
NAG
NAG
178
B
SO4
182
3
SO4
SO4
182
B
HOH
1
5
HOH
HOH
184
A
HOH
12
5
HOH
HOH
185
A
HOH
13
5
HOH
HOH
186
A
HOH
19
5
HOH
HOH
187
A
HOH
20
5
HOH
HOH
188
A
HOH
21
5
HOH
HOH
189
A
HOH
23
5
HOH
HOH
190
A
HOH
31
5
HOH
HOH
191
A
HOH
32
5
HOH
HOH
192
A
HOH
34
5
HOH
HOH
193
A
HOH
39
5
HOH
HOH
194
A
HOH
49
5
HOH
HOH
195
A
HOH
51
5
HOH
HOH
196
A
HOH
52
5
HOH
HOH
197
A
HOH
53
5
HOH
HOH
198
A
HOH
55
5
HOH
HOH
199
A
HOH
56
5
HOH
HOH
200
A
HOH
57
5
HOH
HOH
201
A
HOH
58
5
HOH
HOH
202
A
HOH
59
5
HOH
HOH
203
A
HOH
60
5
HOH
HOH
204
A
HOH
62
5
HOH
HOH
205
A
HOH
63
5
HOH
HOH
206
A
HOH
64
5
HOH
HOH
207
A
HOH
65
5
HOH
HOH
208
A
HOH
66
5
HOH
HOH
209
A
HOH
67
5
HOH
HOH
210
A
HOH
68
5
HOH
HOH
211
A
HOH
69
5
HOH
HOH
212
A
HOH
70
5
HOH
HOH
213
A
HOH
99
5
HOH
HOH
214
A
HOH
105
5
HOH
HOH
215
A
HOH
106
5
HOH
HOH
216
A
HOH
109
5
HOH
HOH
217
A
HOH
110
5
HOH
HOH
218
A
HOH
112
5
HOH
HOH
219
A
HOH
114
5
HOH
HOH
220
A
HOH
115
5
HOH
HOH
221
A
HOH
117
5
HOH
HOH
222
A
HOH
119
5
HOH
HOH
223
A
HOH
124
5
HOH
HOH
224
A
HOH
126
5
HOH
HOH
225
A
HOH
127
5
HOH
HOH
226
A
HOH
130
5
HOH
HOH
227
A
HOH
131
5
HOH
HOH
228
A
HOH
135
5
HOH
HOH
229
A
HOH
136
5
HOH
HOH
230
A
HOH
137
5
HOH
HOH
231
A
HOH
140
5
HOH
HOH
232
A
HOH
141
5
HOH
HOH
233
A
HOH
142
5
HOH
HOH
234
A
HOH
145
5
HOH
HOH
235
A
HOH
2
5
HOH
HOH
183
B
HOH
3
5
HOH
HOH
184
B
HOH
4
5
HOH
HOH
185
B
HOH
5
5
HOH
HOH
186
B
HOH
7
5
HOH
HOH
187
B
HOH
10
5
HOH
HOH
188
B
HOH
11
5
HOH
HOH
189
B
HOH
14
5
HOH
HOH
190
B
HOH
15
5
HOH
HOH
191
B
HOH
16
5
HOH
HOH
192
B
HOH
17
5
HOH
HOH
193
B
HOH
18
5
HOH
HOH
194
B
HOH
22
5
HOH
HOH
195
B
HOH
24
5
HOH
HOH
196
B
HOH
25
5
HOH
HOH
197
B
HOH
26
5
HOH
HOH
198
B
HOH
27
5
HOH
HOH
199
B
HOH
28
5
HOH
HOH
200
B
HOH
29
5
HOH
HOH
201
B
HOH
30
5
HOH
HOH
202
B
HOH
33
5
HOH
HOH
203
B
HOH
35
5
HOH
HOH
204
B
HOH
36
5
HOH
HOH
205
B
HOH
37
5
HOH
HOH
206
B
HOH
38
5
HOH
HOH
207
B
HOH
40
5
HOH
HOH
208
B
HOH
41
5
HOH
HOH
209
B
HOH
42
5
HOH
HOH
210
B
HOH
43
5
HOH
HOH
211
B
HOH
44
5
HOH
HOH
212
B
HOH
45
5
HOH
HOH
213
B
HOH
46
5
HOH
HOH
214
B
HOH
47
5
HOH
HOH
215
B
HOH
50
5
HOH
HOH
216
B
HOH
71
5
HOH
HOH
217
B
HOH
72
5
HOH
HOH
218
B
HOH
73
5
HOH
HOH
219
B
HOH
74
5
HOH
HOH
220
B
HOH
75
5
HOH
HOH
221
B
HOH
78
5
HOH
HOH
222
B
HOH
79
5
HOH
HOH
223
B
HOH
80
5
HOH
HOH
224
B
HOH
82
5
HOH
HOH
225
B
HOH
84
5
HOH
HOH
226
B
HOH
85
5
HOH
HOH
227
B
HOH
86
5
HOH
HOH
228
B
HOH
87
5
HOH
HOH
229
B
HOH
88
5
HOH
HOH
230
B
HOH
90
5
HOH
HOH
231
B
HOH
91
5
HOH
HOH
232
B
HOH
96
5
HOH
HOH
233
B
HOH
98
5
HOH
HOH
234
B
HOH
100
5
HOH
HOH
235
B
HOH
101
5
HOH
HOH
236
B
HOH
102
5
HOH
HOH
237
B
HOH
103
5
HOH
HOH
238
B
HOH
104
5
HOH
HOH
239
B
HOH
107
5
HOH
HOH
240
B
HOH
108
5
HOH
HOH
241
B
HOH
111
5
HOH
HOH
242
B
HOH
116
5
HOH
HOH
243
B
HOH
118
5
HOH
HOH
244
B
HOH
121
5
HOH
HOH
245
B
HOH
122
5
HOH
HOH
246
B
HOH
123
5
HOH
HOH
247
B
HOH
125
5
HOH
HOH
248
B
HOH
128
5
HOH
HOH
249
B
HOH
129
5
HOH
HOH
250
B
HOH
92
5
HOH
HOH
251
B
HOH
93
5
HOH
HOH
252
B
HOH
94
5
HOH
HOH
253
B
HOH
95
5
HOH
HOH
254
B
HOH
132
5
HOH
HOH
255
B
HOH
133
5
HOH
HOH
256
B
HOH
134
5
HOH
HOH
257
B
HOH
138
5
HOH
HOH
258
B
HOH
139
5
HOH
HOH
259
B
HOH
143
5
HOH
HOH
260
B
HOH
144
5
HOH
HOH
261
B
HOH
146
5
HOH
HOH
262
B
HOH
147
5
HOH
HOH
263
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
SER
5
n
5
SER
5
A
ASP
6
n
6
ASP
6
A
LEU
7
n
7
LEU
7
A
ILE
8
n
8
ILE
8
A
PRO
9
n
9
PRO
9
A
ALA
10
n
10
ALA
10
A
PRO
11
n
11
PRO
11
A
PRO
12
n
12
PRO
12
A
LEU
13
n
13
LEU
13
A
SER
14
n
14
SER
14
A
LYS
15
n
15
LYS
15
A
VAL
16
n
16
VAL
16
A
PRO
17
n
17
PRO
17
A
LEU
18
n
18
LEU
18
A
GLN
19
n
19
GLN
19
A
GLN
20
n
20
GLN
20
A
ASN
21
n
21
ASN
21
A
PHE
22
n
22
PHE
22
A
GLN
23
n
23
GLN
23
A
ASP
24
n
24
ASP
24
A
ASN
25
n
25
ASN
25
A
GLN
26
n
26
GLN
26
A
PHE
27
n
27
PHE
27
A
GLN
28
n
28
GLN
28
A
GLY
29
n
29
GLY
29
A
LYS
30
n
30
LYS
30
A
TRP
31
n
31
TRP
31
A
TYR
32
n
32
TYR
32
A
VAL
33
n
33
VAL
33
A
VAL
34
n
34
VAL
34
A
GLY
35
n
35
GLY
35
A
LEU
36
n
36
LEU
36
A
ALA
37
n
37
ALA
37
A
GLY
38
n
38
GLY
38
A
ASN
39
n
39
ASN
39
A
ALA
40
n
40
ALA
40
A
ILE
41
n
41
ILE
41
A
LEU
42
n
42
LEU
42
A
ARG
43
n
43
ARG
43
A
GLU
44
n
44
GLU
44
A
ASP
45
n
45
ASP
45
A
LYS
46
n
46
LYS
46
A
ASP
47
n
47
ASP
47
A
PRO
48
n
48
PRO
48
A
GLN
49
n
49
GLN
49
A
LYS
50
n
50
LYS
50
A
MET
51
n
51
MET
51
A
TYR
52
n
52
TYR
52
A
ALA
53
n
53
ALA
53
A
THR
54
n
54
THR
54
A
ILE
55
n
55
ILE
55
A
TYR
56
n
56
TYR
56
A
GLU
57
n
57
GLU
57
A
LEU
58
n
58
LEU
58
A
LYS
59
n
59
LYS
59
A
GLU
60
n
60
GLU
60
A
ASP
61
n
61
ASP
61
A
LYS
62
n
62
LYS
62
A
SER
63
n
63
SER
63
A
TYR
64
n
64
TYR
64
A
ASN
65
n
65
ASN
65
A
VAL
66
n
66
VAL
66
A
THR
67
n
67
THR
67
A
SER
68
n
68
SER
68
A
VAL
69
n
69
VAL
69
A
LEU
70
n
70
LEU
70
A
PHE
71
n
71
PHE
71
A
ARG
72
n
72
ARG
72
A
LYS
73
n
73
LYS
73
A
LYS
74
n
74
LYS
74
A
LYS
75
n
75
LYS
75
A
CYS
76
n
76
CYS
76
A
ASP
77
n
77
ASP
77
A
TYR
78
n
78
TYR
78
A
TRP
79
n
79
TRP
79
A
ILE
80
n
80
ILE
80
A
ARG
81
n
81
ARG
81
A
THR
82
n
82
THR
82
A
PHE
83
n
83
PHE
83
A
VAL
84
n
84
VAL
84
A
PRO
85
n
85
PRO
85
A
GLY
86
n
86
GLY
86
A
CYS
87
n
87
CYS
87
A
GLN
88
n
88
GLN
88
A
PRO
89
n
89
PRO
89
A
GLY
90
n
90
GLY
90
A
GLU
91
n
91
GLU
91
A
PHE
92
n
92
PHE
92
A
THR
93
n
93
THR
93
A
LEU
94
n
94
LEU
94
A
GLY
95
n
95
GLY
95
A
ASN
96
n
96
ASN
96
A
ILE
97
n
97
ILE
97
A
LYS
98
n
98
LYS
98
A
SER
99
n
99
SER
99
A
TYR
100
n
100
TYR
100
A
PRO
101
n
101
PRO
101
A
GLY
102
n
102
GLY
102
A
LEU
103
n
103
LEU
103
A
THR
104
n
104
THR
104
A
SER
105
n
105
SER
105
A
TYR
106
n
106
TYR
106
A
LEU
107
n
107
LEU
107
A
VAL
108
n
108
VAL
108
A
ARG
109
n
109
ARG
109
A
VAL
110
n
110
VAL
110
A
VAL
111
n
111
VAL
111
A
SER
112
n
112
SER
112
A
THR
113
n
113
THR
113
A
ASN
114
n
114
ASN
114
A
TYR
115
n
115
TYR
115
A
ASN
116
n
116
ASN
116
A
GLN
117
n
117
GLN
117
A
HIS
118
n
118
HIS
118
A
ALA
119
n
119
ALA
119
A
MET
120
n
120
MET
120
A
VAL
121
n
121
VAL
121
A
PHE
122
n
122
PHE
122
A
PHE
123
n
123
PHE
123
A
LYS
124
n
124
LYS
124
A
LYS
125
n
125
LYS
125
A
VAL
126
n
126
VAL
126
A
SER
127
n
127
SER
127
A
GLN
128
n
128
GLN
128
A
ASN
129
n
129
ASN
129
A
ARG
130
n
130
ARG
130
A
GLU
131
n
131
GLU
131
A
TYR
132
n
132
TYR
132
A
PHE
133
n
133
PHE
133
A
LYS
134
n
134
LYS
134
A
ILE
135
n
135
ILE
135
A
THR
136
n
136
THR
136
A
LEU
137
n
137
LEU
137
A
TYR
138
n
138
TYR
138
A
GLY
139
n
139
GLY
139
A
ARG
140
n
140
ARG
140
A
THR
141
n
141
THR
141
A
LYS
142
n
142
LYS
142
A
GLU
143
n
143
GLU
143
A
LEU
144
n
144
LEU
144
A
THR
145
n
145
THR
145
A
SER
146
n
146
SER
146
A
GLU
147
n
147
GLU
147
A
LEU
148
n
148
LEU
148
A
LYS
149
n
149
LYS
149
A
GLU
150
n
150
GLU
150
A
ASN
151
n
151
ASN
151
A
PHE
152
n
152
PHE
152
A
ILE
153
n
153
ILE
153
A
ARG
154
n
154
ARG
154
A
PHE
155
n
155
PHE
155
A
SER
156
n
156
SER
156
A
LYS
157
n
157
LYS
157
A
SER
158
n
158
SER
158
A
LEU
159
n
159
LEU
159
A
GLY
160
n
160
GLY
160
A
LEU
161
n
161
LEU
161
A
PRO
162
n
162
PRO
162
A
GLU
163
n
163
GLU
163
A
ASN
164
n
164
ASN
164
A
HIS
165
n
165
HIS
165
A
ILE
166
n
166
ILE
166
A
VAL
167
n
167
VAL
167
A
PHE
168
n
168
PHE
168
A
PRO
169
n
169
PRO
169
A
VAL
170
n
170
VAL
170
A
PRO
171
n
171
PRO
171
A
ILE
172
n
172
ILE
172
A
ASP
173
n
173
ASP
173
A
GLN
174
n
174
GLN
174
A
CYS
175
n
175
CYS
175
A
ILE
176
n
176
ILE
176
A
ASP
177
n
177
ASP
177
A
n
1
1
B
n
2
2
B
n
3
3
B
THR
4
n
4
THR
4
B
SER
5
n
5
SER
5
B
ASP
6
n
6
ASP
6
B
LEU
7
n
7
LEU
7
B
ILE
8
n
8
ILE
8
B
PRO
9
n
9
PRO
9
B
ALA
10
n
10
ALA
10
B
PRO
11
n
11
PRO
11
B
PRO
12
n
12
PRO
12
B
LEU
13
n
13
LEU
13
B
SER
14
n
14
SER
14
B
LYS
15
n
15
LYS
15
B
VAL
16
n
16
VAL
16
B
PRO
17
n
17
PRO
17
B
LEU
18
n
18
LEU
18
B
GLN
19
n
19
GLN
19
B
GLN
20
n
20
GLN
20
B
ASN
21
n
21
ASN
21
B
PHE
22
n
22
PHE
22
B
GLN
23
n
23
GLN
23
B
ASP
24
n
24
ASP
24
B
ASN
25
n
25
ASN
25
B
GLN
26
n
26
GLN
26
B
PHE
27
n
27
PHE
27
B
GLN
28
n
28
GLN
28
B
GLY
29
n
29
GLY
29
B
LYS
30
n
30
LYS
30
B
TRP
31
n
31
TRP
31
B
TYR
32
n
32
TYR
32
B
VAL
33
n
33
VAL
33
B
VAL
34
n
34
VAL
34
B
GLY
35
n
35
GLY
35
B
LEU
36
n
36
LEU
36
B
ALA
37
n
37
ALA
37
B
GLY
38
n
38
GLY
38
B
ASN
39
n
39
ASN
39
B
ALA
40
n
40
ALA
40
B
ILE
41
n
41
ILE
41
B
LEU
42
n
42
LEU
42
B
ARG
43
n
43
ARG
43
B
GLU
44
n
44
GLU
44
B
ASP
45
n
45
ASP
45
B
LYS
46
n
46
LYS
46
B
ASP
47
n
47
ASP
47
B
PRO
48
n
48
PRO
48
B
GLN
49
n
49
GLN
49
B
LYS
50
n
50
LYS
50
B
MET
51
n
51
MET
51
B
TYR
52
n
52
TYR
52
B
ALA
53
n
53
ALA
53
B
THR
54
n
54
THR
54
B
ILE
55
n
55
ILE
55
B
TYR
56
n
56
TYR
56
B
GLU
57
n
57
GLU
57
B
LEU
58
n
58
LEU
58
B
LYS
59
n
59
LYS
59
B
GLU
60
n
60
GLU
60
B
ASP
61
n
61
ASP
61
B
LYS
62
n
62
LYS
62
B
SER
63
n
63
SER
63
B
TYR
64
n
64
TYR
64
B
ASN
65
n
65
ASN
65
B
VAL
66
n
66
VAL
66
B
THR
67
n
67
THR
67
B
SER
68
n
68
SER
68
B
VAL
69
n
69
VAL
69
B
LEU
70
n
70
LEU
70
B
PHE
71
n
71
PHE
71
B
ARG
72
n
72
ARG
72
B
LYS
73
n
73
LYS
73
B
LYS
74
n
74
LYS
74
B
LYS
75
n
75
LYS
75
B
CYS
76
n
76
CYS
76
B
ASP
77
n
77
ASP
77
B
TYR
78
n
78
TYR
78
B
TRP
79
n
79
TRP
79
B
ILE
80
n
80
ILE
80
B
ARG
81
n
81
ARG
81
B
THR
82
n
82
THR
82
B
PHE
83
n
83
PHE
83
B
VAL
84
n
84
VAL
84
B
PRO
85
n
85
PRO
85
B
GLY
86
n
86
GLY
86
B
CYS
87
n
87
CYS
87
B
GLN
88
n
88
GLN
88
B
PRO
89
n
89
PRO
89
B
GLY
90
n
90
GLY
90
B
GLU
91
n
91
GLU
91
B
PHE
92
n
92
PHE
92
B
THR
93
n
93
THR
93
B
LEU
94
n
94
LEU
94
B
GLY
95
n
95
GLY
95
B
ASN
96
n
96
ASN
96
B
ILE
97
n
97
ILE
97
B
LYS
98
n
98
LYS
98
B
SER
99
n
99
SER
99
B
TYR
100
n
100
TYR
100
B
PRO
101
n
101
PRO
101
B
GLY
102
n
102
GLY
102
B
LEU
103
n
103
LEU
103
B
THR
104
n
104
THR
104
B
SER
105
n
105
SER
105
B
TYR
106
n
106
TYR
106
B
LEU
107
n
107
LEU
107
B
VAL
108
n
108
VAL
108
B
ARG
109
n
109
ARG
109
B
VAL
110
n
110
VAL
110
B
VAL
111
n
111
VAL
111
B
SER
112
n
112
SER
112
B
THR
113
n
113
THR
113
B
ASN
114
n
114
ASN
114
B
TYR
115
n
115
TYR
115
B
ASN
116
n
116
ASN
116
B
GLN
117
n
117
GLN
117
B
HIS
118
n
118
HIS
118
B
ALA
119
n
119
ALA
119
B
MET
120
n
120
MET
120
B
VAL
121
n
121
VAL
121
B
PHE
122
n
122
PHE
122
B
PHE
123
n
123
PHE
123
B
LYS
124
n
124
LYS
124
B
LYS
125
n
125
LYS
125
B
VAL
126
n
126
VAL
126
B
SER
127
n
127
SER
127
B
GLN
128
n
128
GLN
128
B
ASN
129
n
129
ASN
129
B
ARG
130
n
130
ARG
130
B
GLU
131
n
131
GLU
131
B
TYR
132
n
132
TYR
132
B
PHE
133
n
133
PHE
133
B
LYS
134
n
134
LYS
134
B
ILE
135
n
135
ILE
135
B
THR
136
n
136
THR
136
B
LEU
137
n
137
LEU
137
B
TYR
138
n
138
TYR
138
B
GLY
139
n
139
GLY
139
B
ARG
140
n
140
ARG
140
B
THR
141
n
141
THR
141
B
LYS
142
n
142
LYS
142
B
GLU
143
n
143
GLU
143
B
LEU
144
n
144
LEU
144
B
THR
145
n
145
THR
145
B
SER
146
n
146
SER
146
B
GLU
147
n
147
GLU
147
B
LEU
148
n
148
LEU
148
B
LYS
149
n
149
LYS
149
B
GLU
150
n
150
GLU
150
B
ASN
151
n
151
ASN
151
B
PHE
152
n
152
PHE
152
B
ILE
153
n
153
ILE
153
B
ARG
154
n
154
ARG
154
B
PHE
155
n
155
PHE
155
B
SER
156
n
156
SER
156
B
LYS
157
n
157
LYS
157
B
SER
158
n
158
SER
158
B
LEU
159
n
159
LEU
159
B
GLY
160
n
160
GLY
160
B
LEU
161
n
161
LEU
161
B
PRO
162
n
162
PRO
162
B
GLU
163
n
163
GLU
163
B
ASN
164
n
164
ASN
164
B
HIS
165
n
165
HIS
165
B
ILE
166
n
166
ILE
166
B
VAL
167
n
167
VAL
167
B
PHE
168
n
168
PHE
168
B
PRO
169
n
169
PRO
169
B
VAL
170
n
170
VAL
170
B
PRO
171
n
171
PRO
171
B
ILE
172
n
172
ILE
172
B
ASP
173
n
173
ASP
173
B
GLN
174
n
174
GLN
174
B
CYS
175
n
175
CYS
175
B
ILE
176
n
176
ILE
176
B
ASP
177
n
177
ASP
177
B
author_and_software_defined_assembly
PISA
1
monomeric
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
2
dimeric
2040
-35
18430
A
ASN
65
GLYCOSYLATION SITE
A
ASN
65
ASN
B
ASN
65
GLYCOSYLATION SITE
B
ASN
65
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_665
-y+1,-x+1,-z+1/2
crystal symmetry operation
115.0210000000
115.0210000000
58.8190000000
A
O
LEU
7
A
O
LEU
7
B
N
CYS
76
B
N
CYS
76
A
N
VAL
167
A
N
VAL
167
A
O
LEU
36
A
O
LEU
36
A
O
TRP
31
A
O
TRP
31
A
N
THR
54
A
N
THR
54
A
O
GLU
57
A
O
GLU
57
A
N
ASN
65
A
N
ASN
65
A
O
LEU
70
A
O
LEU
70
A
N
ASP
77
A
N
ASP
77
A
N
VAL
84
A
N
VAL
84
A
O
THR
93
A
O
THR
93
A
N
LEU
94
A
N
LEU
94
A
O
TYR
106
A
O
TYR
106
A
O
SER
112
A
O
SER
112
A
N
MET
120
A
N
MET
120
A
O
SER
127
A
O
SER
127
A
N
ARG
130
A
N
ARG
130
A
O
GLY
139
A
O
GLY
139
A
N
TYR
32
A
N
TYR
32
A
O
ALA
37
A
O
ALA
37
A
N
ILE
135
A
N
ILE
135
A
O
LEU
7
A
O
LEU
7
B
N
CYS
76
B
N
CYS
76
B
N
VAL
84
B
N
VAL
84
B
O
THR
93
B
O
THR
93
B
N
LEU
94
B
N
LEU
94
B
O
TYR
106
B
O
TYR
106
B
O
SER
112
B
O
SER
112
B
N
MET
120
B
N
MET
120
B
O
SER
127
B
O
SER
127
B
N
ARG
130
B
N
ARG
130
B
O
GLY
139
B
O
GLY
139
B
N
TYR
32
B
N
TYR
32
B
O
LEU
36
B
O
LEU
36
B
N
VAL
167
B
N
VAL
167
B
N
VAL
167
B
N
VAL
167
B
O
LEU
36
B
O
LEU
36
B
O
TRP
31
B
O
TRP
31
B
N
THR
54
B
N
THR
54
B
O
GLU
57
B
O
GLU
57
B
N
ASN
65
B
N
ASN
65
B
O
LEU
70
B
O
LEU
70
B
N
ASP
77
B
N
ASP
77
1
B
HOH
230
I
HOH
1
A
CG
GLU
44
A
CG
GLU
44
1
Y
1
A
CD
GLU
44
A
CD
GLU
44
1
Y
1
A
OE1
GLU
44
A
OE1
GLU
44
1
Y
1
A
OE2
GLU
44
A
OE2
GLU
44
1
Y
1
A
CG
LYS
46
A
CG
LYS
46
1
Y
1
A
CD
LYS
46
A
CD
LYS
46
1
Y
1
A
CE
LYS
46
A
CE
LYS
46
1
Y
1
A
NZ
LYS
46
A
NZ
LYS
46
1
Y
1
A
CG
ARG
72
A
CG
ARG
72
1
Y
1
A
CD
ARG
72
A
CD
ARG
72
1
Y
1
A
NE
ARG
72
A
NE
ARG
72
1
Y
1
A
CZ
ARG
72
A
CZ
ARG
72
1
Y
1
A
NH1
ARG
72
A
NH1
ARG
72
1
Y
1
A
NH2
ARG
72
A
NH2
ARG
72
1
Y
1
A
CG
LYS
73
A
CG
LYS
73
1
Y
1
A
CD
LYS
73
A
CD
LYS
73
1
Y
1
A
CE
LYS
73
A
CE
LYS
73
1
Y
1
A
NZ
LYS
73
A
NZ
LYS
73
1
Y
1
A
CG
LYS
98
A
CG
LYS
98
1
Y
1
A
CD
LYS
98
A
CD
LYS
98
1
Y
1
A
CE
LYS
98
A
CE
LYS
98
1
Y
1
A
NZ
LYS
98
A
NZ
LYS
98
1
Y
1
A
GLN
1
A
GLN
1
1
Y
1
A
ASP
2
A
ASP
2
1
Y
1
A
SER
3
A
SER
3
1
Y
1
A
THR
4
A
THR
4
1
Y
1
B
GLN
1
B
GLN
1
1
Y
1
B
ASP
2
B
ASP
2
1
Y
1
B
SER
3
B
SER
3
1
Y
1
B
C1
NAG
178
WRONG HAND
1
19.67
2.70
111.00
130.67
B
B
B
N
CA
C
ILE
ILE
ILE
97
97
97
N
1
A
LEU
13
-24.60
-44.80
1
A
ARG
43
-68.23
73.12
1
A
ASP
47
-167.28
70.73
1
A
ARG
72
-91.44
-76.19
1
A
LYS
74
70.35
47.92
1
A
LYS
75
179.46
169.73
1
A
ILE
97
-42.87
161.40
1
A
LYS
98
94.24
-17.62
1
A
TYR
106
-173.29
128.13
1
A
TYR
115
64.13
-14.71
1
A
GLN
117
-104.78
-71.68
1
A
GLN
128
58.07
16.53
1
A
ASN
129
85.01
-4.13
1
A
CYS
175
59.74
-23.34
1
B
ASP
47
-163.18
72.77
1
B
ASN
96
60.24
-6.90
1
B
ILE
97
6.04
-22.36
1
B
TYR
106
-161.56
114.43
1
B
TYR
115
60.60
-22.88
1
B
GLN
117
-120.94
-54.35
1
B
GLN
128
71.09
-5.04
1
B
ASN
129
103.81
7.28
1
B
CYS
175
61.63
-22.02
PROTEIN_REP.PA
PROTEIN.TOP
WATER_REP.PARA
WATER.TOP
ION.PARAM
ION.TOP
CARBOHYDRATE.P
CARBOHYDRATE.TOP
46.8
.48
.00
.00
.48
.00
-.96
0.293
.006
0.281
0.281
0.281
2.60
20.00
2144
24809
21882
9.8
88.2
RANDOM
846783.96
.00
1
RESTRAINED
THROUGHOUT
0.
0.
Engh & Huber
FLAT MODEL
56.14
.3621
.40
.39
5.00
.33
.30
2.60
20.00
133
3011
57
0
2821
.008
1.7
28.1
1.03
2.81
1.50
4.23
2.00
4.51
2.00
6.16
2.50
0.359
.019
0.341
2.76
371
3233
6
10.3
89.0
53.8
2.48
20.
1DFV
28608
25147
0
0
0.052
1
43.8
4.2
87.9
0.255
2.48
2.52
1
3.3
60.
data reduction
DENZO
data scaling
SCALEPACK
phasing
EPMR
refinement
CNS
0.5
HUMAN NEUTROPHIL GELATINASE ASSOCIATED LIPOCALIN
CRYSTAL STRUCTURE OF HUMAN NEUTROPHIL GELATINASE ASSOCIATED LIPOCALIN MONOMER
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
3
N
N
5
N
N
5
N
N
A
PRO
12
A
PRO
12
HELX_P
A
VAL
16
A
VAL
16
5
1
5
A
THR
145
A
THR
145
HELX_P
A
LEU
159
A
LEU
159
1
2
15
A
PRO
162
A
PRO
162
HELX_P
A
ASN
164
A
ASN
164
5
3
3
B
PRO
12
B
PRO
12
HELX_P
B
VAL
16
B
VAL
16
5
4
5
B
THR
145
B
THR
145
HELX_P
B
LEU
159
B
LEU
159
1
5
15
B
PRO
162
B
PRO
162
HELX_P
B
ASN
164
B
ASN
164
5
6
3
disulf
2.030
A
CYS
76
A
SG
CYS
76
1_555
A
CYS
175
A
SG
CYS
175
1_555
disulf
2.028
B
CYS
76
B
SG
CYS
76
1_555
B
CYS
175
B
SG
CYS
175
1_555
covale
1.447
one
N-Glycosylation
A
ASN
65
A
ND2
ASN
65
1_555
C
NAG
1
C
C1
NAG
1_555
covale
1.523
one
N-Glycosylation
B
ASN
65
B
ND2
ASN
65
1_555
B
NAG
178
F
C1
NAG
1_555
covale
1.367
both
C
NAG
1
C
O4
NAG
1_555
C
NAG
2
C
C1
NAG
1_555
SUGAR BINDING PROTEIN
NEUTROPHIL, NGAL, LIPOCALIN, SUGAR BINDING PROTEIN
NGAL_HUMAN
UNP
1
P80188
21
197
1DFV
1
177
P80188
A
1
1
177
21
197
1DFV
1
177
P80188
B
1
1
177
2
11
12
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ASP
6
A
ASP
6
A
LEU
7
A
LEU
7
B
CYS
76
B
CYS
76
B
PRO
85
B
PRO
85
A
ILE
166
A
ILE
166
A
VAL
167
A
VAL
167
A
GLY
29
A
GLY
29
A
GLY
38
A
GLY
38
A
ALA
53
A
ALA
53
A
LEU
58
A
LEU
58
A
TYR
64
A
TYR
64
A
PHE
71
A
PHE
71
A
CYS
76
A
CYS
76
A
PRO
85
A
PRO
85
A
GLU
91
A
GLU
91
A
LEU
94
A
LEU
94
A
LEU
103
A
LEU
103
A
THR
113
A
THR
113
A
HIS
118
A
HIS
118
A
SER
127
A
SER
127
A
ARG
130
A
ARG
130
A
GLY
139
A
GLY
139
A
GLY
29
A
GLY
29
A
GLY
38
A
GLY
38
A
ARG
130
A
ARG
130
A
GLY
139
A
GLY
139
A
ASP
6
A
ASP
6
A
LEU
7
A
LEU
7
B
CYS
76
B
CYS
76
B
PRO
85
B
PRO
85
B
GLU
91
B
GLU
91
B
LEU
94
B
LEU
94
B
LEU
103
B
LEU
103
B
THR
113
B
THR
113
B
HIS
118
B
HIS
118
B
SER
127
B
SER
127
B
ARG
130
B
ARG
130
B
GLY
139
B
GLY
139
B
GLY
29
B
GLY
29
B
GLY
38
B
GLY
38
B
ILE
166
B
ILE
166
B
VAL
167
B
VAL
167
B
GLY
29
B
GLY
29
B
GLY
38
B
GLY
38
B
ALA
53
B
ALA
53
B
LEU
58
B
LEU
58
B
TYR
64
B
TYR
64
B
PHE
71
B
PHE
71
B
CYS
76
B
CYS
76
B
PRO
85
B
PRO
85
92
P 41 21 2