1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Liang, H.
Petros, A.P.
Meadows, R.P.
Yoon, H.S.
Egan, D.A.
Walter, K.
Holzman, T.F.
Robins, T.
Fesik, S.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
N
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
Y
320
N
sing
Y
321
N
sing
N
322
N
sing
Y
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
35
2095
2103
10.1021/bi951932w
8652551
Solution structure of the DNA-binding domain of a human papillomavirus E2 protein: evidence for flexible DNA-binding regions.
1996
10.2210/pdb1dhm/pdb
pdb_00001dhm
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
FROM HUMAN PAPILLOMAVIRUS-31
9523.972
E2 PROTEIN
DNA-BINDING DOMAIN
2
man
polymer
no
no
MATTPIIHLKGDANILKCLRYRLSKYKQLYEQVSSTWHWTCTDGKHKNAIVTLTYISTSQRDDFLNTVKIPNTVSVSTGY
MTI
MATTPIIHLKGDANILKCLRYRLSKYKQLYEQVSSTWHWTCTDGKHKNAIVTLTYISTSQRDDFLNTVKIPNTVSVSTGY
MTI
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Alphapapillomavirus
Human papillomavirus - 16
31
Escherichia
sample
T7 RNA POLYMERASE DRIVEN
E2
10585
Human papillomavirus type
562
Escherichia coli
PET3B
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
struct_keywords
repository
Initial release
Version format compliance
Source and taxonomy
Version format compliance
Data collection
Database references
Other
Structure summary
1
0
1996-12-07
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-04-10
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_keywords.text
Y
BNL
1995-08-15
REL
MINIMIZED AVERAGE
1
BRUNGER
refinement
X-PLOR
MET
1
n
1
MET
1
A
ALA
2
n
2
ALA
2
A
THR
3
n
3
THR
3
A
THR
4
n
4
THR
4
A
PRO
5
n
5
PRO
5
A
ILE
6
n
6
ILE
6
A
ILE
7
n
7
ILE
7
A
HIS
8
n
8
HIS
8
A
LEU
9
n
9
LEU
9
A
LYS
10
n
10
LYS
10
A
GLY
11
n
11
GLY
11
A
ASP
12
n
12
ASP
12
A
ALA
13
n
13
ALA
13
A
ASN
14
n
14
ASN
14
A
ILE
15
n
15
ILE
15
A
LEU
16
n
16
LEU
16
A
LYS
17
n
17
LYS
17
A
CYS
18
n
18
CYS
18
A
LEU
19
n
19
LEU
19
A
ARG
20
n
20
ARG
20
A
TYR
21
n
21
TYR
21
A
ARG
22
n
22
ARG
22
A
LEU
23
n
23
LEU
23
A
SER
24
n
24
SER
24
A
LYS
25
n
25
LYS
25
A
TYR
26
n
26
TYR
26
A
LYS
27
n
27
LYS
27
A
GLN
28
n
28
GLN
28
A
LEU
29
n
29
LEU
29
A
TYR
30
n
30
TYR
30
A
GLU
31
n
31
GLU
31
A
GLN
32
n
32
GLN
32
A
VAL
33
n
33
VAL
33
A
SER
34
n
34
SER
34
A
SER
35
n
35
SER
35
A
THR
36
n
36
THR
36
A
TRP
37
n
37
TRP
37
A
HIS
38
n
38
HIS
38
A
TRP
39
n
39
TRP
39
A
THR
40
n
40
THR
40
A
CYS
41
n
41
CYS
41
A
THR
42
n
42
THR
42
A
ASP
43
n
43
ASP
43
A
GLY
44
n
44
GLY
44
A
LYS
45
n
45
LYS
45
A
HIS
46
n
46
HIS
46
A
LYS
47
n
47
LYS
47
A
ASN
48
n
48
ASN
48
A
ALA
49
n
49
ALA
49
A
ILE
50
n
50
ILE
50
A
VAL
51
n
51
VAL
51
A
THR
52
n
52
THR
52
A
LEU
53
n
53
LEU
53
A
THR
54
n
54
THR
54
A
TYR
55
n
55
TYR
55
A
ILE
56
n
56
ILE
56
A
SER
57
n
57
SER
57
A
THR
58
n
58
THR
58
A
SER
59
n
59
SER
59
A
GLN
60
n
60
GLN
60
A
ARG
61
n
61
ARG
61
A
ASP
62
n
62
ASP
62
A
ASP
63
n
63
ASP
63
A
PHE
64
n
64
PHE
64
A
LEU
65
n
65
LEU
65
A
ASN
66
n
66
ASN
66
A
THR
67
n
67
THR
67
A
VAL
68
n
68
VAL
68
A
LYS
69
n
69
LYS
69
A
ILE
70
n
70
ILE
70
A
PRO
71
n
71
PRO
71
A
ASN
72
n
72
ASN
72
A
THR
73
n
73
THR
73
A
VAL
74
n
74
VAL
74
A
SER
75
n
75
SER
75
A
VAL
76
n
76
VAL
76
A
SER
77
n
77
SER
77
A
THR
78
n
78
THR
78
A
GLY
79
n
79
GLY
79
A
TYR
80
n
80
TYR
80
A
MET
81
n
81
MET
81
A
THR
82
n
82
THR
82
A
ILE
83
n
83
ILE
83
A
MET
1
n
1
MET
1
B
ALA
2
n
2
ALA
2
B
THR
3
n
3
THR
3
B
THR
4
n
4
THR
4
B
PRO
5
n
5
PRO
5
B
ILE
6
n
6
ILE
6
B
ILE
7
n
7
ILE
7
B
HIS
8
n
8
HIS
8
B
LEU
9
n
9
LEU
9
B
LYS
10
n
10
LYS
10
B
GLY
11
n
11
GLY
11
B
ASP
12
n
12
ASP
12
B
ALA
13
n
13
ALA
13
B
ASN
14
n
14
ASN
14
B
ILE
15
n
15
ILE
15
B
LEU
16
n
16
LEU
16
B
LYS
17
n
17
LYS
17
B
CYS
18
n
18
CYS
18
B
LEU
19
n
19
LEU
19
B
ARG
20
n
20
ARG
20
B
TYR
21
n
21
TYR
21
B
ARG
22
n
22
ARG
22
B
LEU
23
n
23
LEU
23
B
SER
24
n
24
SER
24
B
LYS
25
n
25
LYS
25
B
TYR
26
n
26
TYR
26
B
LYS
27
n
27
LYS
27
B
GLN
28
n
28
GLN
28
B
LEU
29
n
29
LEU
29
B
TYR
30
n
30
TYR
30
B
GLU
31
n
31
GLU
31
B
GLN
32
n
32
GLN
32
B
VAL
33
n
33
VAL
33
B
SER
34
n
34
SER
34
B
SER
35
n
35
SER
35
B
THR
36
n
36
THR
36
B
TRP
37
n
37
TRP
37
B
HIS
38
n
38
HIS
38
B
TRP
39
n
39
TRP
39
B
THR
40
n
40
THR
40
B
CYS
41
n
41
CYS
41
B
THR
42
n
42
THR
42
B
ASP
43
n
43
ASP
43
B
GLY
44
n
44
GLY
44
B
LYS
45
n
45
LYS
45
B
HIS
46
n
46
HIS
46
B
LYS
47
n
47
LYS
47
B
ASN
48
n
48
ASN
48
B
ALA
49
n
49
ALA
49
B
ILE
50
n
50
ILE
50
B
VAL
51
n
51
VAL
51
B
THR
52
n
52
THR
52
B
LEU
53
n
53
LEU
53
B
THR
54
n
54
THR
54
B
TYR
55
n
55
TYR
55
B
ILE
56
n
56
ILE
56
B
SER
57
n
57
SER
57
B
THR
58
n
58
THR
58
B
SER
59
n
59
SER
59
B
GLN
60
n
60
GLN
60
B
ARG
61
n
61
ARG
61
B
ASP
62
n
62
ASP
62
B
ASP
63
n
63
ASP
63
B
PHE
64
n
64
PHE
64
B
LEU
65
n
65
LEU
65
B
ASN
66
n
66
ASN
66
B
THR
67
n
67
THR
67
B
VAL
68
n
68
VAL
68
B
LYS
69
n
69
LYS
69
B
ILE
70
n
70
ILE
70
B
PRO
71
n
71
PRO
71
B
ASN
72
n
72
ASN
72
B
THR
73
n
73
THR
73
B
VAL
74
n
74
VAL
74
B
SER
75
n
75
SER
75
B
VAL
76
n
76
VAL
76
B
SER
77
n
77
SER
77
B
THR
78
n
78
THR
78
B
GLY
79
n
79
GLY
79
B
TYR
80
n
80
TYR
80
B
MET
81
n
81
MET
81
B
THR
82
n
82
THR
82
B
ILE
83
n
83
ILE
83
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
75
A
O
SER
75
A
N
LYS
10
A
N
LYS
10
A
O
ILE
7
A
O
ILE
7
A
N
LEU
53
A
N
LEU
53
B
O
SER
75
B
O
SER
75
B
N
LYS
10
B
N
LYS
10
B
O
ILE
7
B
O
ILE
7
B
N
LEU
53
B
N
LEU
53
1
A
ARG
20
0.311
SIDE CHAIN
1
A
ARG
22
0.315
SIDE CHAIN
1
A
ARG
61
0.281
SIDE CHAIN
1
B
ARG
20
0.312
SIDE CHAIN
1
B
ARG
22
0.315
SIDE CHAIN
1
B
ARG
61
0.281
SIDE CHAIN
1
A
ALA
2
-162.06
-60.45
1
A
THR
3
49.69
94.02
1
A
TYR
26
-114.96
65.15
1
A
GLU
31
-112.25
-70.13
1
A
TRP
37
-127.12
-167.35
1
A
THR
40
63.23
-160.89
1
A
ASP
43
-163.29
-44.70
1
A
HIS
46
-162.56
44.33
1
A
LYS
47
54.36
72.50
1
A
ASN
48
-177.93
63.63
1
A
TYR
55
-119.16
-165.29
1
B
ALA
2
-161.80
-60.60
1
B
THR
3
49.94
93.77
1
B
TYR
26
-115.49
64.81
1
B
GLU
31
-113.48
-70.81
1
B
TRP
37
-127.79
-168.04
1
B
THR
40
62.32
-161.41
1
B
ASP
43
-163.40
-44.81
1
B
HIS
46
-162.12
43.66
1
B
LYS
47
55.00
73.06
1
B
ASN
48
-178.55
64.19
1
B
TYR
55
-119.89
-165.76
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
DNA-BINDING DOMAIN OF E2 FROM HUMAN PAPILLOMAVIRUS-31, NMR, MINIMIZED AVERAGE STRUCTURE
1
N
N
1
N
N
A
ALA
13
A
ALA
13
HELX_P
A
LYS
25
A
LYS
25
1
A1
13
A
THR
58
A
THR
58
HELX_P
A
THR
67
A
THR
67
1
A2
10
B
ALA
13
B
ALA
13
HELX_P
B
LYS
25
B
LYS
25
1
B1
13
B
THR
58
B
THR
58
HELX_P
B
THR
67
B
THR
67
1
B2
10
DNA BINDING PROTEIN
DNA-BINDING PROTEIN, TRANSCRIPTIONAL ACTIVATOR, EARLY PROTEIN, TRANS-ACTING FACTOR, DNA BINDING PROTEIN
VE2_HPV31
UNP
1
1
P17383
METLSQRLNVCQDKILEHYENDSKRLCDHIDYWKHIRLECVLMYKAREMGIHSINHQVVPALSVSKAKALQAIELQMMLE
TLNNTEYKNEDWTMQQTSLELYLTAPTGCLKKHGYTVEVQFDGDVHNTMHYTNWKFIYLCIDGQCTVVEGQVNCKGIYYV
HEGHITYFVNFTEEAKKYGTGKKWEVHAGGQVIVFPESVFSSDEISFAGIVTKLPTANNTTTSNSKTCALGTSEGVRRAT
TSTKRPRTEPEHRNTHHPNKLLRGDSVDSVNCGVISAAACTNQTRAVSCPATTPIIHLKGDANILKCLRYRLSKYKQLYE
QVSSTWHWTCTDGKHKNAIVTLTYISTSQRDDFLNTVKIPNTVSVSTGYMTI
291
372
1DHM
2
83
P17383
A
1
2
83
291
372
1DHM
2
83
P17383
B
1
2
83
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
75
A
SER
75
A
TYR
80
A
TYR
80
A
PRO
5
A
PRO
5
A
GLY
11
A
GLY
11
A
ALA
49
A
ALA
49
A
THR
54
A
THR
54
B
SER
75
B
SER
75
B
TYR
80
B
TYR
80
B
PRO
5
B
PRO
5
B
GLY
11
B
GLY
11
B
ALA
49
B
ALA
49
B
THR
54
B
THR
54
1
P 1