0.009058
0.000000
0.002461
0.000000
0.017094
0.000000
0.000000
0.000000
0.017593
0.00000
0.00000
0.00000
Ryter, J.M.
Schultz, S.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
105.20
90.00
110.400
58.500
58.900
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
O
N
59
N
P
N
60
N
O
N
61
N
O
N
62
N
O
N
63
N
C
N
64
R
C
N
65
N
O
N
66
S
C
N
67
N
O
N
68
R
C
N
69
N
O
N
70
R
C
N
71
N
N
N
72
N
C
N
73
N
O
N
74
N
N
N
75
N
C
N
76
N
N
N
77
N
C
N
78
N
C
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
N
N
94
R
C
N
95
N
C
N
96
N
O
N
97
N
C
N
98
N
S
N
99
N
O
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
O
N
108
N
P
N
109
N
O
N
110
N
O
N
111
N
O
N
112
N
C
N
113
R
C
N
114
N
O
N
115
S
C
N
116
N
O
N
117
R
C
N
118
N
O
N
119
R
C
Y
120
N
N
Y
121
N
C
Y
122
N
N
Y
123
N
C
N
124
N
C
N
125
N
O
N
126
N
N
N
127
N
C
N
128
N
N
N
129
N
N
Y
130
N
C
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
N
N
146
S
C
N
147
N
C
N
148
N
O
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
O
N
153
N
N
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
S
C
N
167
N
C
N
168
N
O
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
N
C
N
186
N
C
N
187
N
O
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
N
N
195
S
C
N
196
N
C
N
197
N
O
N
198
N
C
Y
199
N
C
Y
200
N
N
Y
201
N
C
Y
202
N
C
Y
203
N
N
N
204
N
O
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
N
N
219
S
C
N
220
N
C
N
221
N
O
N
222
S
C
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
N
N
263
S
C
N
264
N
C
N
265
N
O
N
266
N
C
N
267
N
C
N
268
N
C
N
269
N
C
N
270
N
N
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
S
N
294
N
C
N
295
N
O
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
N
N
331
S
C
N
332
N
C
N
333
N
O
N
334
N
C
N
335
N
C
N
336
N
C
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
N
C
N
352
N
O
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
R
C
N
366
N
O
N
367
N
C
N
368
N
O
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
N
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
N
392
N
O
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
N
N
406
S
C
N
407
N
C
N
408
N
O
N
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
N
416
N
O
N
417
N
O
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
N
N
430
S
C
N
431
N
C
N
432
N
O
N
433
N
C
N
434
N
C
N
435
N
C
N
436
N
O
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
Y
128
N
sing
Y
129
N
sing
Y
130
N
doub
N
131
N
sing
Y
132
N
sing
N
133
N
sing
Y
134
N
doub
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
Y
201
N
sing
Y
202
N
doub
Y
203
N
doub
N
204
N
sing
Y
205
N
sing
N
206
N
sing
Y
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
Y
309
N
doub
Y
310
N
sing
Y
311
N
sing
N
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
Y
378
N
doub
Y
379
N
sing
Y
380
N
sing
N
381
N
sing
Y
382
N
doub
Y
383
N
sing
Y
384
N
sing
N
385
N
sing
Y
386
N
sing
Y
387
N
doub
N
388
N
sing
Y
389
N
doub
N
390
N
sing
Y
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
Y
406
N
doub
Y
407
N
sing
Y
408
N
sing
N
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
doub
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
UK
EMBO J.
EMJODG
0897
0261-4189
17
7505
7513
10.1093/emboj/17.24.7505
9857205
Molecular basis of double-stranded RNA-protein interactions: structure of a dsRNA-binding domain complexed with dsRNA.
1998
10.2210/pdb1di2/pdb
pdb_00001di2
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
113.0
1
IMAGE PLATE
1996-01-25
RIGAKU RAXIS IIC
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
3206.981
RNA (5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3')
4
syn
polymer
7689.862
DOUBLE STRANDED RNA BINDING PROTEIN A
SECOND DSRNA BINDING DOMAIN
N112M
2
man
polymer
18.015
water
359
nat
water
XLRBPA
no
no
GGCGCGCGCC
GGCGCGCGCC
C,D,E,G
polyribonucleotide
no
no
MPVGSLQELAVQKGWRLPEYTVAQESGPPHKREFTITCRVETFVETGSGTSKQVAKRVAAEKLLTKFKT
MPVGSLQELAVQKGWRLPEYTVAQESGPPHKREFTITCRVETFVETGSGTSKQVAKRVAAEKLLTKFKT
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
African clawed frog
Xenopus
Escherichia
sample
8355
Xenopus laevis
562
Escherichia coli
PLASMID
PET3
1
3.6
59.0
VAPOR DIFFUSION, HANGING DROP
5.4
PEG 4000, ETHYLENE GLYCOL, KCL, NACL, MES, DTT, BETA-MERCAPTOETHANOL, pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
298.0
KCL
1
NACL
1
MES
1
DTT
1
BETA-MERCAPTOETHANOL
1
ETHYLENE GLYCOL
1
PEG 4000
1
ETHYLENE GLYCOL
2
PEG 4000
2
-1.638
1
19
C
1
D
20
0.552
C_G1:C20_D
1
-11.906
-0.364
0.093
-0.211
-6.660
1
19
C
2
D
19
1.337
C_G2:C19_D
2
-14.535
-0.271
0.007
-0.227
-7.457
1
19
C
3
D
18
-1.389
C_C3:G18_D
3
-11.644
0.528
0.148
-0.323
-6.894
1
19
C
4
D
17
1.392
C_G4:C17_D
4
-7.339
0.026
0.055
-0.194
-7.111
1
19
C
5
D
16
0.184
C_C5:G16_D
5
-5.457
0.061
0.367
-0.135
-4.758
1
19
C
6
D
15
2.174
C_G6:C15_D
6
-5.570
-0.102
-0.189
-0.109
2.799
1
19
C
7
D
14
1.809
C_C7:G14_D
7
-8.336
0.232
-0.077
-0.056
2.399
1
19
C
8
D
13
-0.482
C_G8:C13_D
8
-10.041
-0.025
-0.028
-0.178
3.926
1
19
C
9
D
12
3.252
C_C9:G12_D
9
-12.805
0.281
-0.097
-0.112
5.580
1
19
C
10
D
11
0.936
C_C10:G11_D
10
-4.533
0.451
0.001
-0.149
-3.256
1
19
E
21
E
30
-1.236
E_G21:C30_E
11
-7.632
-0.532
0.166
-0.134
-7.812
1
19
E
22
E
29
2.297
E_G22:C29_E
12
-14.965
-0.306
-0.057
-0.268
-4.285
1
19
E
23
E
28
-1.665
E_C23:G28_E
13
-11.552
0.259
0.101
-0.267
-5.455
1
19
E
24
E
27
2.324
E_G24:C27_E
14
-10.307
-0.116
-0.082
-0.022
0.539
1
19
E
25
E
26
0.720
E_C25:G26_E
15
-11.454
0.030
-0.010
-0.135
-0.539
1
19
E
26
E
25
0.720
E_G26:C25_E
16
-11.454
-0.030
-0.010
-0.135
5.455
1
19
E
27
E
24
2.324
E_C27:G24_E
17
-10.307
0.116
-0.082
-0.022
4.285
1
19
E
28
E
23
-1.665
E_G28:C23_E
18
-11.552
-0.259
0.101
-0.267
7.812
1
19
E
29
E
22
2.297
E_C29:G22_E
19
-14.965
0.306
-0.057
-0.268
3.255
1
19
E
30
E
21
-1.236
E_C30:G21_E
20
-7.632
0.532
0.166
-0.134
3.223
35.754
C
C
1
2
6.253
D
D
20
19
3.374
3.832
-0.078
-1.291
CC_G1G2:C19C20_DD
1
-0.100
0.163
35.555
-2.662
0.112
3.059
36.130
C
C
2
3
7.425
D
D
19
18
3.250
4.592
0.087
-1.364
CC_G2C3:G18C19_DD
2
1.182
-1.912
35.828
-2.827
0.021
2.206
27.926
C
C
3
4
21.440
D
D
18
17
3.025
10.092
0.911
-2.002
CC_C3G4:C17G18_DD
3
3.583
-7.612
25.829
-6.148
-1.179
3.075
33.007
C
C
4
5
9.115
D
D
17
16
3.366
5.157
0.285
-1.551
CC_G4C5:G16C17_DD
4
-1.499
2.649
32.579
-3.597
-0.753
2.132
26.436
C
C
5
6
22.043
D
D
16
15
3.072
9.742
0.872
-2.322
CC_C5G6:C15G16_DD
5
6.511
-14.734
23.739
-7.253
-0.452
3.105
31.226
C
C
6
7
3.249
D
D
15
14
3.190
1.746
-0.328
-1.748
CC_G6C7:G14C15_DD
6
-2.266
4.216
31.098
-3.566
0.195
2.575
28.788
C
C
7
8
16.018
D
D
14
13
3.169
7.861
-0.879
-1.977
CC_C7G8:C13G14_DD
7
-1.928
3.929
27.650
-5.553
1.382
3.012
33.840
C
C
8
9
8.404
D
D
13
12
3.221
4.874
0.217
-1.313
CC_G8C9:G12C13_DD
8
1.367
-2.358
33.470
-3.009
-0.161
2.793
31.488
C
C
9
10
10.193
D
D
12
11
3.192
5.505
0.328
-2.073
CC_C9C10:G11G12_DD
9
0.101
-0.188
31.015
-4.767
-0.587
2.752
35.790
E
E
21
22
14.161
E
E
30
29
3.254
8.622
-0.155
-1.751
EE_G21G22:C29C30_EE
10
0.673
-1.105
34.762
-4.006
0.342
2.939
35.256
E
E
22
23
9.019
E
E
29
28
3.150
5.441
-0.287
-1.223
EE_G22C23:G28C29_EE
11
-1.237
2.050
34.826
-2.776
0.301
2.567
29.579
E
E
23
24
17.761
E
E
28
27
3.176
8.919
0.819
-1.792
EE_C23G24:C27G28_EE
12
2.823
-5.621
28.092
-5.213
-1.066
2.945
31.030
E
E
24
25
8.308
E
E
27
26
3.195
4.430
-0.030
-1.573
EE_G24C25:G26C27_EE
13
-0.187
0.352
30.719
-3.743
0.022
2.103
31.049
E
E
25
26
26.593
E
E
26
25
3.246
13.763
0.000
-1.888
EE_C25G26:C25G26_EE
14
0.000
0.000
27.900
-5.811
0.000
2.945
31.030
E
E
26
27
8.308
E
E
25
24
3.195
4.430
0.030
-1.573
EE_G26C27:G24C25_EE
15
0.187
-0.352
30.719
-3.743
-0.022
2.567
29.579
E
E
27
28
17.761
E
E
24
23
3.176
8.919
-0.819
-1.792
EE_C27G28:C23G24_EE
16
-2.823
5.621
28.092
-5.213
1.066
2.939
35.256
E
E
28
29
9.019
E
E
23
22
3.150
5.441
0.287
-1.223
EE_G28C29:G22C23_EE
17
1.237
-2.050
34.826
-2.776
-0.301
2.752
35.790
E
E
29
30
14.161
E
E
22
21
3.254
8.622
0.155
-1.751
EE_C29C30:G21G22_EE
18
-0.673
1.105
34.762
-4.006
-0.342
database_2
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Data collection
1
0
1999-12-02
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-11-03
1
4
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
1999-11-28
REL
REL
HOH
water
T7 TRANSCRIPTION OF SYNTHETIC DNA OLIGONUCLEOTIDES
sample
HOH
3
3
HOH
HOH
11
C
HOH
14
3
HOH
HOH
12
C
HOH
17
3
HOH
HOH
13
C
HOH
18
3
HOH
HOH
14
C
HOH
19
3
HOH
HOH
15
C
HOH
43
3
HOH
HOH
16
C
HOH
53
3
HOH
HOH
17
C
HOH
71
3
HOH
HOH
18
C
HOH
72
3
HOH
HOH
19
C
HOH
74
3
HOH
HOH
20
C
HOH
79
3
HOH
HOH
21
C
HOH
82
3
HOH
HOH
22
C
HOH
121
3
HOH
HOH
23
C
HOH
132
3
HOH
HOH
24
C
HOH
133
3
HOH
HOH
25
C
HOH
134
3
HOH
HOH
26
C
HOH
144
3
HOH
HOH
27
C
HOH
162
3
HOH
HOH
28
C
HOH
163
3
HOH
HOH
29
C
HOH
164
3
HOH
HOH
30
C
HOH
166
3
HOH
HOH
31
C
HOH
167
3
HOH
HOH
32
C
HOH
183
3
HOH
HOH
33
C
HOH
184
3
HOH
HOH
34
C
HOH
188
3
HOH
HOH
35
C
HOH
201
3
HOH
HOH
36
C
HOH
204
3
HOH
HOH
37
C
HOH
205
3
HOH
HOH
38
C
HOH
210
3
HOH
HOH
39
C
HOH
211
3
HOH
HOH
40
C
HOH
223
3
HOH
HOH
41
C
HOH
254
3
HOH
HOH
42
C
HOH
255
3
HOH
HOH
43
C
HOH
257
3
HOH
HOH
44
C
HOH
261
3
HOH
HOH
45
C
HOH
268
3
HOH
HOH
46
C
HOH
270
3
HOH
HOH
47
C
HOH
272
3
HOH
HOH
48
C
HOH
273
3
HOH
HOH
49
C
HOH
274
3
HOH
HOH
50
C
HOH
275
3
HOH
HOH
51
C
HOH
277
3
HOH
HOH
52
C
HOH
328
3
HOH
HOH
53
C
HOH
329
3
HOH
HOH
54
C
HOH
333
3
HOH
HOH
55
C
HOH
335
3
HOH
HOH
56
C
HOH
336
3
HOH
HOH
57
C
HOH
337
3
HOH
HOH
58
C
HOH
338
3
HOH
HOH
59
C
HOH
339
3
HOH
HOH
60
C
HOH
340
3
HOH
HOH
61
C
HOH
341
3
HOH
HOH
62
C
HOH
342
3
HOH
HOH
63
C
HOH
343
3
HOH
HOH
64
C
HOH
345
3
HOH
HOH
65
C
HOH
346
3
HOH
HOH
66
C
HOH
347
3
HOH
HOH
67
C
HOH
348
3
HOH
HOH
68
C
HOH
349
3
HOH
HOH
69
C
HOH
350
3
HOH
HOH
70
C
HOH
362
3
HOH
HOH
71
C
HOH
363
3
HOH
HOH
72
C
HOH
364
3
HOH
HOH
73
C
HOH
13
3
HOH
HOH
21
D
HOH
15
3
HOH
HOH
22
D
HOH
16
3
HOH
HOH
23
D
HOH
30
3
HOH
HOH
24
D
HOH
41
3
HOH
HOH
25
D
HOH
42
3
HOH
HOH
26
D
HOH
45
3
HOH
HOH
27
D
HOH
47
3
HOH
HOH
28
D
HOH
61
3
HOH
HOH
29
D
HOH
73
3
HOH
HOH
30
D
HOH
76
3
HOH
HOH
31
D
HOH
80
3
HOH
HOH
32
D
HOH
81
3
HOH
HOH
33
D
HOH
83
3
HOH
HOH
34
D
HOH
84
3
HOH
HOH
35
D
HOH
100
3
HOH
HOH
36
D
HOH
120
3
HOH
HOH
37
D
HOH
126
3
HOH
HOH
38
D
HOH
129
3
HOH
HOH
39
D
HOH
130
3
HOH
HOH
40
D
HOH
131
3
HOH
HOH
41
D
HOH
140
3
HOH
HOH
42
D
HOH
146
3
HOH
HOH
43
D
HOH
159
3
HOH
HOH
44
D
HOH
168
3
HOH
HOH
45
D
HOH
171
3
HOH
HOH
46
D
HOH
178
3
HOH
HOH
47
D
HOH
179
3
HOH
HOH
48
D
HOH
180
3
HOH
HOH
49
D
HOH
181
3
HOH
HOH
50
D
HOH
182
3
HOH
HOH
51
D
HOH
196
3
HOH
HOH
52
D
HOH
202
3
HOH
HOH
53
D
HOH
203
3
HOH
HOH
54
D
HOH
222
3
HOH
HOH
55
D
HOH
233
3
HOH
HOH
56
D
HOH
258
3
HOH
HOH
57
D
HOH
259
3
HOH
HOH
58
D
HOH
260
3
HOH
HOH
59
D
HOH
264
3
HOH
HOH
60
D
HOH
265
3
HOH
HOH
61
D
HOH
266
3
HOH
HOH
62
D
HOH
267
3
HOH
HOH
63
D
HOH
269
3
HOH
HOH
64
D
HOH
280
3
HOH
HOH
65
D
HOH
327
3
HOH
HOH
66
D
HOH
353
3
HOH
HOH
67
D
HOH
354
3
HOH
HOH
68
D
HOH
355
3
HOH
HOH
69
D
HOH
356
3
HOH
HOH
70
D
HOH
357
3
HOH
HOH
71
D
HOH
358
3
HOH
HOH
72
D
HOH
359
3
HOH
HOH
73
D
HOH
360
3
HOH
HOH
74
D
HOH
361
3
HOH
HOH
75
D
HOH
365
3
HOH
HOH
76
D
HOH
366
3
HOH
HOH
77
D
HOH
367
3
HOH
HOH
78
D
HOH
368
3
HOH
HOH
79
D
HOH
369
3
HOH
HOH
80
D
HOH
370
3
HOH
HOH
81
D
HOH
371
3
HOH
HOH
82
D
HOH
372
3
HOH
HOH
83
D
HOH
6
3
HOH
HOH
31
E
HOH
11
3
HOH
HOH
32
E
HOH
12
3
HOH
HOH
33
E
HOH
20
3
HOH
HOH
34
E
HOH
21
3
HOH
HOH
35
E
HOH
22
3
HOH
HOH
36
E
HOH
23
3
HOH
HOH
37
E
HOH
24
3
HOH
HOH
38
E
HOH
25
3
HOH
HOH
39
E
HOH
26
3
HOH
HOH
40
E
HOH
27
3
HOH
HOH
41
E
HOH
28
3
HOH
HOH
42
E
HOH
32
3
HOH
HOH
43
E
HOH
35
3
HOH
HOH
44
E
HOH
37
3
HOH
HOH
45
E
HOH
38
3
HOH
HOH
46
E
HOH
39
3
HOH
HOH
47
E
HOH
44
3
HOH
HOH
48
E
HOH
50
3
HOH
HOH
49
E
HOH
51
3
HOH
HOH
50
E
HOH
57
3
HOH
HOH
51
E
HOH
64
3
HOH
HOH
52
E
HOH
107
3
HOH
HOH
53
E
HOH
108
3
HOH
HOH
54
E
HOH
127
3
HOH
HOH
55
E
HOH
128
3
HOH
HOH
56
E
HOH
136
3
HOH
HOH
57
E
HOH
137
3
HOH
HOH
58
E
HOH
138
3
HOH
HOH
59
E
HOH
139
3
HOH
HOH
60
E
HOH
141
3
HOH
HOH
61
E
HOH
165
3
HOH
HOH
62
E
HOH
174
3
HOH
HOH
63
E
HOH
176
3
HOH
HOH
64
E
HOH
187
3
HOH
HOH
65
E
HOH
199
3
HOH
HOH
66
E
HOH
206
3
HOH
HOH
67
E
HOH
207
3
HOH
HOH
68
E
HOH
208
3
HOH
HOH
69
E
HOH
224
3
HOH
HOH
70
E
HOH
228
3
HOH
HOH
71
E
HOH
279
3
HOH
HOH
72
E
HOH
282
3
HOH
HOH
73
E
HOH
299
3
HOH
HOH
74
E
HOH
323
3
HOH
HOH
75
E
HOH
324
3
HOH
HOH
76
E
HOH
326
3
HOH
HOH
77
E
HOH
330
3
HOH
HOH
78
E
HOH
331
3
HOH
HOH
79
E
HOH
332
3
HOH
HOH
80
E
HOH
334
3
HOH
HOH
81
E
HOH
373
3
HOH
HOH
82
E
HOH
7
3
HOH
HOH
181
A
HOH
8
3
HOH
HOH
182
A
HOH
9
3
HOH
HOH
183
A
HOH
10
3
HOH
HOH
184
A
HOH
33
3
HOH
HOH
185
A
HOH
34
3
HOH
HOH
186
A
HOH
36
3
HOH
HOH
187
A
HOH
46
3
HOH
HOH
188
A
HOH
48
3
HOH
HOH
189
A
HOH
49
3
HOH
HOH
190
A
HOH
58
3
HOH
HOH
191
A
HOH
59
3
HOH
HOH
192
A
HOH
60
3
HOH
HOH
193
A
HOH
62
3
HOH
HOH
194
A
HOH
63
3
HOH
HOH
195
A
HOH
65
3
HOH
HOH
196
A
HOH
66
3
HOH
HOH
197
A
HOH
67
3
HOH
HOH
198
A
HOH
68
3
HOH
HOH
199
A
HOH
69
3
HOH
HOH
200
A
HOH
70
3
HOH
HOH
201
A
HOH
90
3
HOH
HOH
202
A
HOH
106
3
HOH
HOH
203
A
HOH
109
3
HOH
HOH
204
A
HOH
110
3
HOH
HOH
205
A
HOH
111
3
HOH
HOH
206
A
HOH
112
3
HOH
HOH
207
A
HOH
113
3
HOH
HOH
208
A
HOH
115
3
HOH
HOH
209
A
HOH
116
3
HOH
HOH
210
A
HOH
117
3
HOH
HOH
211
A
HOH
118
3
HOH
HOH
212
A
HOH
119
3
HOH
HOH
213
A
HOH
122
3
HOH
HOH
214
A
HOH
123
3
HOH
HOH
215
A
HOH
124
3
HOH
HOH
216
A
HOH
125
3
HOH
HOH
217
A
HOH
150
3
HOH
HOH
218
A
HOH
151
3
HOH
HOH
219
A
HOH
153
3
HOH
HOH
220
A
HOH
154
3
HOH
HOH
221
A
HOH
155
3
HOH
HOH
222
A
HOH
156
3
HOH
HOH
223
A
HOH
157
3
HOH
HOH
224
A
HOH
158
3
HOH
HOH
225
A
HOH
160
3
HOH
HOH
226
A
HOH
161
3
HOH
HOH
227
A
HOH
175
3
HOH
HOH
228
A
HOH
177
3
HOH
HOH
229
A
HOH
189
3
HOH
HOH
230
A
HOH
190
3
HOH
HOH
231
A
HOH
191
3
HOH
HOH
232
A
HOH
192
3
HOH
HOH
233
A
HOH
193
3
HOH
HOH
234
A
HOH
194
3
HOH
HOH
235
A
HOH
195
3
HOH
HOH
236
A
HOH
197
3
HOH
HOH
237
A
HOH
198
3
HOH
HOH
238
A
HOH
218
3
HOH
HOH
239
A
HOH
219
3
HOH
HOH
240
A
HOH
220
3
HOH
HOH
241
A
HOH
221
3
HOH
HOH
242
A
HOH
234
3
HOH
HOH
243
A
HOH
235
3
HOH
HOH
244
A
HOH
238
3
HOH
HOH
245
A
HOH
240
3
HOH
HOH
246
A
HOH
242
3
HOH
HOH
247
A
HOH
243
3
HOH
HOH
248
A
HOH
244
3
HOH
HOH
249
A
HOH
245
3
HOH
HOH
250
A
HOH
246
3
HOH
HOH
251
A
HOH
247
3
HOH
HOH
252
A
HOH
248
3
HOH
HOH
253
A
HOH
250
3
HOH
HOH
254
A
HOH
251
3
HOH
HOH
255
A
HOH
252
3
HOH
HOH
256
A
HOH
253
3
HOH
HOH
257
A
HOH
256
3
HOH
HOH
258
A
HOH
283
3
HOH
HOH
259
A
HOH
284
3
HOH
HOH
260
A
HOH
289
3
HOH
HOH
261
A
HOH
297
3
HOH
HOH
262
A
HOH
305
3
HOH
HOH
263
A
HOH
306
3
HOH
HOH
264
A
HOH
307
3
HOH
HOH
265
A
HOH
308
3
HOH
HOH
266
A
HOH
309
3
HOH
HOH
267
A
HOH
310
3
HOH
HOH
268
A
HOH
311
3
HOH
HOH
269
A
HOH
312
3
HOH
HOH
270
A
HOH
313
3
HOH
HOH
271
A
HOH
314
3
HOH
HOH
272
A
HOH
315
3
HOH
HOH
273
A
HOH
316
3
HOH
HOH
274
A
HOH
317
3
HOH
HOH
275
A
HOH
318
3
HOH
HOH
276
A
HOH
320
3
HOH
HOH
277
A
HOH
1
3
HOH
HOH
181
B
HOH
2
3
HOH
HOH
182
B
HOH
4
3
HOH
HOH
183
B
HOH
5
3
HOH
HOH
184
B
HOH
29
3
HOH
HOH
185
B
HOH
52
3
HOH
HOH
186
B
HOH
54
3
HOH
HOH
187
B
HOH
55
3
HOH
HOH
188
B
HOH
56
3
HOH
HOH
189
B
HOH
77
3
HOH
HOH
190
B
HOH
85
3
HOH
HOH
191
B
HOH
86
3
HOH
HOH
192
B
HOH
87
3
HOH
HOH
193
B
HOH
88
3
HOH
HOH
194
B
HOH
89
3
HOH
HOH
195
B
HOH
91
3
HOH
HOH
196
B
HOH
92
3
HOH
HOH
197
B
HOH
93
3
HOH
HOH
198
B
HOH
94
3
HOH
HOH
199
B
HOH
95
3
HOH
HOH
200
B
HOH
96
3
HOH
HOH
201
B
HOH
97
3
HOH
HOH
202
B
HOH
98
3
HOH
HOH
203
B
HOH
99
3
HOH
HOH
204
B
HOH
101
3
HOH
HOH
205
B
HOH
102
3
HOH
HOH
206
B
HOH
103
3
HOH
HOH
207
B
HOH
104
3
HOH
HOH
208
B
HOH
105
3
HOH
HOH
209
B
HOH
114
3
HOH
HOH
210
B
HOH
142
3
HOH
HOH
211
B
HOH
143
3
HOH
HOH
212
B
HOH
145
3
HOH
HOH
213
B
HOH
147
3
HOH
HOH
214
B
HOH
148
3
HOH
HOH
215
B
HOH
149
3
HOH
HOH
216
B
HOH
152
3
HOH
HOH
217
B
HOH
169
3
HOH
HOH
218
B
HOH
170
3
HOH
HOH
219
B
HOH
172
3
HOH
HOH
220
B
HOH
173
3
HOH
HOH
221
B
HOH
186
3
HOH
HOH
222
B
HOH
209
3
HOH
HOH
223
B
HOH
212
3
HOH
HOH
224
B
HOH
213
3
HOH
HOH
225
B
HOH
214
3
HOH
HOH
226
B
HOH
215
3
HOH
HOH
227
B
HOH
216
3
HOH
HOH
228
B
HOH
217
3
HOH
HOH
229
B
HOH
225
3
HOH
HOH
230
B
HOH
226
3
HOH
HOH
231
B
HOH
227
3
HOH
HOH
232
B
HOH
229
3
HOH
HOH
233
B
HOH
230
3
HOH
HOH
234
B
HOH
231
3
HOH
HOH
235
B
HOH
232
3
HOH
HOH
236
B
HOH
236
3
HOH
HOH
237
B
HOH
237
3
HOH
HOH
238
B
HOH
239
3
HOH
HOH
239
B
HOH
241
3
HOH
HOH
240
B
HOH
249
3
HOH
HOH
241
B
HOH
262
3
HOH
HOH
242
B
HOH
263
3
HOH
HOH
243
B
HOH
281
3
HOH
HOH
244
B
HOH
285
3
HOH
HOH
245
B
HOH
286
3
HOH
HOH
246
B
HOH
287
3
HOH
HOH
247
B
HOH
288
3
HOH
HOH
248
B
HOH
290
3
HOH
HOH
249
B
HOH
291
3
HOH
HOH
250
B
HOH
292
3
HOH
HOH
251
B
HOH
293
3
HOH
HOH
252
B
HOH
294
3
HOH
HOH
253
B
HOH
295
3
HOH
HOH
254
B
HOH
296
3
HOH
HOH
255
B
HOH
298
3
HOH
HOH
256
B
HOH
300
3
HOH
HOH
257
B
HOH
301
3
HOH
HOH
258
B
HOH
302
3
HOH
HOH
259
B
HOH
303
3
HOH
HOH
260
B
HOH
304
3
HOH
HOH
261
B
HOH
325
3
HOH
HOH
262
B
HOH
344
3
HOH
HOH
263
B
HOH
351
3
HOH
HOH
264
B
G
1
n
1
G
1
C
G
2
n
2
G
2
C
C
3
n
3
C
3
C
G
4
n
4
G
4
C
C
5
n
5
C
5
C
G
6
n
6
G
6
C
C
7
n
7
C
7
C
G
8
n
8
G
8
C
C
9
n
9
C
9
C
C
10
n
10
C
10
C
G
11
n
1
G
11
D
G
12
n
2
G
12
D
C
13
n
3
C
13
D
G
14
n
4
G
14
D
C
15
n
5
C
15
D
G
16
n
6
G
16
D
C
17
n
7
C
17
D
G
18
n
8
G
18
D
C
19
n
9
C
19
D
C
20
n
10
C
20
D
G
21
n
1
G
21
E
G
22
n
2
G
22
E
C
23
n
3
C
23
E
G
24
n
4
G
24
E
C
25
n
5
C
25
E
G
26
n
6
G
26
E
C
27
n
7
C
27
E
G
28
n
8
G
28
E
C
29
n
9
C
29
E
C
30
n
10
C
30
E
G
41
n
1
G
41
G
G
42
n
2
G
42
G
C
43
n
3
C
43
G
G
44
n
4
G
44
G
C
45
n
5
C
45
G
G
46
n
6
G
46
G
C
47
n
7
C
47
G
G
48
n
8
G
48
G
C
49
n
9
C
49
G
C
50
n
10
C
50
G
MET
112
n
1
MET
112
A
PRO
113
n
2
PRO
113
A
VAL
114
n
3
VAL
114
A
GLY
115
n
4
GLY
115
A
SER
116
n
5
SER
116
A
LEU
117
n
6
LEU
117
A
GLN
118
n
7
GLN
118
A
GLU
119
n
8
GLU
119
A
LEU
120
n
9
LEU
120
A
ALA
121
n
10
ALA
121
A
VAL
122
n
11
VAL
122
A
GLN
123
n
12
GLN
123
A
LYS
124
n
13
LYS
124
A
GLY
125
n
14
GLY
125
A
TRP
126
n
15
TRP
126
A
ARG
127
n
16
ARG
127
A
LEU
128
n
17
LEU
128
A
PRO
129
n
18
PRO
129
A
GLU
130
n
19
GLU
130
A
TYR
131
n
20
TYR
131
A
THR
132
n
21
THR
132
A
VAL
133
n
22
VAL
133
A
ALA
134
n
23
ALA
134
A
GLN
135
n
24
GLN
135
A
GLU
136
n
25
GLU
136
A
SER
137
n
26
SER
137
A
GLY
138
n
27
GLY
138
A
PRO
139
n
28
PRO
139
A
PRO
140
n
29
PRO
140
A
HIS
141
n
30
HIS
141
A
LYS
142
n
31
LYS
142
A
ARG
143
n
32
ARG
143
A
GLU
144
n
33
GLU
144
A
PHE
145
n
34
PHE
145
A
THR
146
n
35
THR
146
A
ILE
147
n
36
ILE
147
A
THR
148
n
37
THR
148
A
CYS
149
n
38
CYS
149
A
ARG
150
n
39
ARG
150
A
VAL
151
n
40
VAL
151
A
GLU
152
n
41
GLU
152
A
THR
153
n
42
THR
153
A
PHE
154
n
43
PHE
154
A
VAL
155
n
44
VAL
155
A
GLU
156
n
45
GLU
156
A
THR
157
n
46
THR
157
A
GLY
158
n
47
GLY
158
A
SER
159
n
48
SER
159
A
GLY
160
n
49
GLY
160
A
THR
161
n
50
THR
161
A
SER
162
n
51
SER
162
A
LYS
163
n
52
LYS
163
A
GLN
164
n
53
GLN
164
A
VAL
165
n
54
VAL
165
A
ALA
166
n
55
ALA
166
A
LYS
167
n
56
LYS
167
A
ARG
168
n
57
ARG
168
A
VAL
169
n
58
VAL
169
A
ALA
170
n
59
ALA
170
A
ALA
171
n
60
ALA
171
A
GLU
172
n
61
GLU
172
A
LYS
173
n
62
LYS
173
A
LEU
174
n
63
LEU
174
A
LEU
175
n
64
LEU
175
A
THR
176
n
65
THR
176
A
LYS
177
n
66
LYS
177
A
PHE
178
n
67
PHE
178
A
LYS
179
n
68
LYS
179
A
THR
180
n
69
THR
180
A
MET
112
n
1
MET
112
B
PRO
113
n
2
PRO
113
B
VAL
114
n
3
VAL
114
B
GLY
115
n
4
GLY
115
B
SER
116
n
5
SER
116
B
LEU
117
n
6
LEU
117
B
GLN
118
n
7
GLN
118
B
GLU
119
n
8
GLU
119
B
LEU
120
n
9
LEU
120
B
ALA
121
n
10
ALA
121
B
VAL
122
n
11
VAL
122
B
GLN
123
n
12
GLN
123
B
LYS
124
n
13
LYS
124
B
GLY
125
n
14
GLY
125
B
TRP
126
n
15
TRP
126
B
ARG
127
n
16
ARG
127
B
LEU
128
n
17
LEU
128
B
PRO
129
n
18
PRO
129
B
GLU
130
n
19
GLU
130
B
TYR
131
n
20
TYR
131
B
THR
132
n
21
THR
132
B
VAL
133
n
22
VAL
133
B
ALA
134
n
23
ALA
134
B
GLN
135
n
24
GLN
135
B
n
25
136
B
n
26
137
B
n
27
138
B
n
28
139
B
n
29
140
B
n
30
141
B
n
31
142
B
n
32
143
B
n
33
144
B
PHE
145
n
34
PHE
145
B
THR
146
n
35
THR
146
B
ILE
147
n
36
ILE
147
B
THR
148
n
37
THR
148
B
CYS
149
n
38
CYS
149
B
ARG
150
n
39
ARG
150
B
VAL
151
n
40
VAL
151
B
GLU
152
n
41
GLU
152
B
THR
153
n
42
THR
153
B
PHE
154
n
43
PHE
154
B
VAL
155
n
44
VAL
155
B
GLU
156
n
45
GLU
156
B
THR
157
n
46
THR
157
B
GLY
158
n
47
GLY
158
B
SER
159
n
48
SER
159
B
GLY
160
n
49
GLY
160
B
THR
161
n
50
THR
161
B
SER
162
n
51
SER
162
B
LYS
163
n
52
LYS
163
B
GLN
164
n
53
GLN
164
B
VAL
165
n
54
VAL
165
B
ALA
166
n
55
ALA
166
B
LYS
167
n
56
LYS
167
B
ARG
168
n
57
ARG
168
B
VAL
169
n
58
VAL
169
B
ALA
170
n
59
ALA
170
B
ALA
171
n
60
ALA
171
B
GLU
172
n
61
GLU
172
B
LYS
173
n
62
LYS
173
B
LEU
174
n
63
LEU
174
B
LEU
175
n
64
LEU
175
B
THR
176
n
65
THR
176
B
LYS
177
n
66
LYS
177
B
PHE
178
n
67
PHE
178
B
LYS
179
n
68
LYS
179
B
THR
180
n
69
THR
180
B
author_defined_assembly
4
tetrameric
author_defined_assembly
2
dimeric
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_656
-x+1,y,-z+1
crystal symmetry operation
94.9570573781
0.0000000000
56.8394715244
A
N
SER
137
E
N
SER
26
A
O
GLU
144
E
O
GLU
33
A
O
VAL
151
E
O
VAL
40
A
N
PHE
154
E
N
PHE
43
B
O
GLU
130
F
O
GLU
19
B
N
ARG
150
F
N
ARG
39
B
O
VAL
151
F
O
VAL
40
B
N
PHE
154
F
N
PHE
43
1
B
GLU
136
F
GLU
25
1
Y
1
B
SER
137
F
SER
26
1
Y
1
B
GLY
138
F
GLY
27
1
Y
1
B
PRO
139
F
PRO
28
1
Y
1
B
PRO
140
F
PRO
29
1
Y
1
B
HIS
141
F
HIS
30
1
Y
1
B
LYS
142
F
LYS
31
1
Y
1
B
ARG
143
F
ARG
32
1
Y
1
B
GLU
144
F
GLU
33
1
Y
1
A
LYS
142
-152.33
63.88
1
A
GLU
152
53.13
-112.56
1
B
GLU
152
56.14
-128.75
PROTEIN_REP.PA
PROTEIN.TOP
DNA-RNA_REP.PA
DNA-RNA.TOP
WATER_REP.PARA
WATER.TOP
33.9
-7.03
0.00
-1.99
10.70
0.00
-3.67
0.2580000
0.005
0.2280000
0.2310000
0.2310000
1.90
15.00
2406
28633
24336
9.9
85.3
RANDOM
346673.89
0.00
1
RESTRAINED
THROUGHOUT
0
-3.0
SIR
ENGH & HUBER AND PARKINSON ET AL.
FLAT MODEL
54.79
0.356
0.30
0.26
5.00
0.30
0.29
1.90
15.00
373
2257
0
848
1036
0.006
1.1
15.9
1.16
2.17
1.50
2.81
2.00
2.85
2.00
3.94
2.50
0.3500000
0.023
0.3270000
2.02
241
2177
6
10.0
51.0
15.8
1.89
99
1DI2
28729
26083
-3.0
0.0630000
1
10.0
2.4
90.8
0.2870000
1.89
1.96
2.50
1.66
50.0
phasing
MLPHARE
refinement
CNS
data reduction
DENZO
data scaling
SCALEPACK
CRYSTAL STRUCTURE OF A DSRNA-BINDING DOMAIN COMPLEXED WITH DSRNA: MOLECULAR BASIS OF DOUBLE-STRANDED RNA-PROTEIN INTERACTIONS
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
MET
112
E
MET
1
HELX_P
A
GLY
125
E
GLY
14
1
1
14
A
PRO
139
E
PRO
28
HELX_P
A
ARG
143
E
ARG
32
5
2
5
A
SER
162
E
SER
51
HELX_P
A
THR
180
E
THR
69
1
3
19
B
MET
112
F
MET
1
HELX_P
B
GLY
125
F
GLY
14
1
4
14
B
SER
162
F
SER
51
HELX_P
B
THR
180
F
THR
69
1
5
19
hydrog
WATSON-CRICK
C
G
1
A
N1
G
1
1_555
D
C
20
B
N3
C
10
1_555
hydrog
WATSON-CRICK
C
G
1
A
N2
G
1
1_555
D
C
20
B
O2
C
10
1_555
hydrog
WATSON-CRICK
C
G
1
A
O6
G
1
1_555
D
C
20
B
N4
C
10
1_555
hydrog
WATSON-CRICK
C
G
2
A
N1
G
2
1_555
D
C
19
B
N3
C
9
1_555
hydrog
WATSON-CRICK
C
G
2
A
N2
G
2
1_555
D
C
19
B
O2
C
9
1_555
hydrog
WATSON-CRICK
C
G
2
A
O6
G
2
1_555
D
C
19
B
N4
C
9
1_555
hydrog
WATSON-CRICK
C
C
3
A
N3
C
3
1_555
D
G
18
B
N1
G
8
1_555
hydrog
WATSON-CRICK
C
C
3
A
N4
C
3
1_555
D
G
18
B
O6
G
8
1_555
hydrog
WATSON-CRICK
C
C
3
A
O2
C
3
1_555
D
G
18
B
N2
G
8
1_555
hydrog
WATSON-CRICK
C
G
4
A
N1
G
4
1_555
D
C
17
B
N3
C
7
1_555
hydrog
WATSON-CRICK
C
G
4
A
N2
G
4
1_555
D
C
17
B
O2
C
7
1_555
hydrog
WATSON-CRICK
C
G
4
A
O6
G
4
1_555
D
C
17
B
N4
C
7
1_555
hydrog
WATSON-CRICK
C
C
5
A
N3
C
5
1_555
D
G
16
B
N1
G
6
1_555
hydrog
WATSON-CRICK
C
C
5
A
N4
C
5
1_555
D
G
16
B
O6
G
6
1_555
hydrog
WATSON-CRICK
C
C
5
A
O2
C
5
1_555
D
G
16
B
N2
G
6
1_555
hydrog
WATSON-CRICK
C
G
6
A
N1
G
6
1_555
D
C
15
B
N3
C
5
1_555
hydrog
WATSON-CRICK
C
G
6
A
N2
G
6
1_555
D
C
15
B
O2
C
5
1_555
hydrog
WATSON-CRICK
C
G
6
A
O6
G
6
1_555
D
C
15
B
N4
C
5
1_555
hydrog
WATSON-CRICK
C
C
7
A
N3
C
7
1_555
D
G
14
B
N1
G
4
1_555
hydrog
WATSON-CRICK
C
C
7
A
N4
C
7
1_555
D
G
14
B
O6
G
4
1_555
hydrog
WATSON-CRICK
C
C
7
A
O2
C
7
1_555
D
G
14
B
N2
G
4
1_555
hydrog
WATSON-CRICK
C
G
8
A
N1
G
8
1_555
D
C
13
B
N3
C
3
1_555
hydrog
WATSON-CRICK
C
G
8
A
N2
G
8
1_555
D
C
13
B
O2
C
3
1_555
hydrog
WATSON-CRICK
C
G
8
A
O6
G
8
1_555
D
C
13
B
N4
C
3
1_555
hydrog
WATSON-CRICK
C
C
9
A
N3
C
9
1_555
D
G
12
B
N1
G
2
1_555
hydrog
WATSON-CRICK
C
C
9
A
N4
C
9
1_555
D
G
12
B
O6
G
2
1_555
hydrog
WATSON-CRICK
C
C
9
A
O2
C
9
1_555
D
G
12
B
N2
G
2
1_555
hydrog
WATSON-CRICK
C
C
10
A
N3
C
10
1_555
D
G
11
B
N1
G
1
1_555
hydrog
WATSON-CRICK
C
C
10
A
N4
C
10
1_555
D
G
11
B
O6
G
1
1_555
hydrog
WATSON-CRICK
C
C
10
A
O2
C
10
1_555
D
G
11
B
N2
G
1
1_555
hydrog
WATSON-CRICK
E
G
21
C
N1
G
1
1_555
E
C
30
C
N3
C
10
2_555
hydrog
WATSON-CRICK
E
G
21
C
N2
G
1
1_555
E
C
30
C
O2
C
10
2_555
hydrog
WATSON-CRICK
E
G
21
C
O6
G
1
1_555
E
C
30
C
N4
C
10
2_555
hydrog
WATSON-CRICK
E
G
22
C
N1
G
2
1_555
E
C
29
C
N3
C
9
2_555
hydrog
WATSON-CRICK
E
G
22
C
N2
G
2
1_555
E
C
29
C
O2
C
9
2_555
hydrog
WATSON-CRICK
E
G
22
C
O6
G
2
1_555
E
C
29
C
N4
C
9
2_555
hydrog
WATSON-CRICK
E
C
23
C
N3
C
3
1_555
E
G
28
C
N1
G
8
2_555
hydrog
WATSON-CRICK
E
C
23
C
N4
C
3
1_555
E
G
28
C
O6
G
8
2_555
hydrog
WATSON-CRICK
E
C
23
C
O2
C
3
1_555
E
G
28
C
N2
G
8
2_555
hydrog
WATSON-CRICK
E
G
24
C
N1
G
4
1_555
E
C
27
C
N3
C
7
2_555
hydrog
WATSON-CRICK
E
G
24
C
N2
G
4
1_555
E
C
27
C
O2
C
7
2_555
hydrog
WATSON-CRICK
E
G
24
C
O6
G
4
1_555
E
C
27
C
N4
C
7
2_555
hydrog
WATSON-CRICK
E
C
25
C
N3
C
5
1_555
E
G
26
C
N1
G
6
2_555
hydrog
WATSON-CRICK
E
C
25
C
N4
C
5
1_555
E
G
26
C
O6
G
6
2_555
hydrog
WATSON-CRICK
E
C
25
C
O2
C
5
1_555
E
G
26
C
N2
G
6
2_555
hydrog
WATSON-CRICK
E
G
26
C
N1
G
6
1_555
E
C
25
C
N3
C
5
2_555
hydrog
WATSON-CRICK
E
G
26
C
N2
G
6
1_555
E
C
25
C
O2
C
5
2_555
hydrog
WATSON-CRICK
E
G
26
C
O6
G
6
1_555
E
C
25
C
N4
C
5
2_555
hydrog
WATSON-CRICK
E
C
27
C
N3
C
7
1_555
E
G
24
C
N1
G
4
2_555
hydrog
WATSON-CRICK
E
C
27
C
N4
C
7
1_555
E
G
24
C
O6
G
4
2_555
hydrog
WATSON-CRICK
E
C
27
C
O2
C
7
1_555
E
G
24
C
N2
G
4
2_555
hydrog
WATSON-CRICK
E
G
28
C
N1
G
8
1_555
E
C
23
C
N3
C
3
2_555
hydrog
WATSON-CRICK
E
G
28
C
N2
G
8
1_555
E
C
23
C
O2
C
3
2_555
hydrog
WATSON-CRICK
E
G
28
C
O6
G
8
1_555
E
C
23
C
N4
C
3
2_555
hydrog
WATSON-CRICK
E
C
29
C
N3
C
9
1_555
E
G
22
C
N1
G
2
2_555
hydrog
WATSON-CRICK
E
C
29
C
N4
C
9
1_555
E
G
22
C
O6
G
2
2_555
hydrog
WATSON-CRICK
E
C
29
C
O2
C
9
1_555
E
G
22
C
N2
G
2
2_555
hydrog
WATSON-CRICK
E
C
30
C
N3
C
10
1_555
E
G
21
C
N1
G
1
2_555
hydrog
WATSON-CRICK
E
C
30
C
N4
C
10
1_555
E
G
21
C
O6
G
1
2_555
hydrog
WATSON-CRICK
E
C
30
C
O2
C
10
1_555
E
G
21
C
N2
G
1
2_555
RNA BINDING PROTEIN/RNA
PROTEIN-RNA COMPLEX, DOUBLE STRANDED RNA, PROTEIN-RNA INTERACTIONS, RNA-BINING PROTEIN, RNA BINDING PROTEIN-RNA COMPLEX
TRBP_XENLA
UNP
2
Q91836
1DI2
PDB
1
1DI2
112
180
1DI2
112
180
Q91836
A
1
1
69
112
180
1DI2
112
180
Q91836
B
1
1
69
1
10
1DI2
1
10
1DI2
C
2
1
10
11
20
1DI2
11
20
1DI2
D
2
1
10
21
30
1DI2
21
30
1DI2
E
2
1
10
41
50
1DI2
41
50
1DI2
G
2
1
10
1
ASN
engineered mutation
MET
112
1DI2
A
Q91836
UNP
112
1
2
ASN
engineered mutation
MET
112
1DI2
B
Q91836
UNP
112
1
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
130
E
GLU
19
A
SER
137
E
SER
26
A
GLU
144
E
GLU
33
A
VAL
151
E
VAL
40
A
PHE
154
E
PHE
43
A
GLY
160
E
GLY
49
B
GLU
130
F
GLU
19
B
TYR
131
F
TYR
20
B
THR
146
F
THR
35
B
VAL
151
F
VAL
40
B
PHE
154
F
PHE
43
B
SER
159
F
SER
48
5
monoclinic
C 1 2 1