0.006549
0.003781
0.000000
0.000000
0.007562
0.000000
0.000000
0.000000
0.011547
0.00000
0.00000
0.00000
THE COFACTOR PYRIDOXAL-5'-PHOSPHATE (PLP 272) IS COVALENTLY ATTACHED TO LYS 272.
Toney, M.D.
Hohenester, E.
Jansonius, J.N.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
152.700
152.700
86.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
K 1
39.098
POTASSIUM ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H13 N O4 S
195.237
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
non-polymer
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C8 H10 N O6 P
247.142
PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Science
SCIEAS
0038
0036-8075
261
756
759
8342040
Dialkylglycine decarboxylase structure: bifunctional active site and alkali metal sites.
1993
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
222
873
Crystallization and Preliminary X-Ray Diffraction Studies of Dialkylglycine Decarboxylase, a Decarboxylating Transaminase
1991
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
265
5531
Pseudomonas Cepacia 2,2-Dialkylglycine Decarboxylase: Sequence and Expression in Escherichia Coli of Structural and Repressor Genes
1990
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
46577.402
2,2-DIALKYLGLYCINE DECARBOXYLASE (PYRUVATE)
4.1.1.64
1
man
polymer
22.990
SODIUM ION
1
syn
non-polymer
39.098
POTASSIUM ION
1
syn
non-polymer
247.142
PYRIDOXAL-5'-PHOSPHATE
1
syn
non-polymer
195.237
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
1
syn
non-polymer
18.015
water
145
nat
water
no
no
MSLNDDATFWRNARHHLVRYGGTFEPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFS
EMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPA
AVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLL
ILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDV
VQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPG
MGGVFRIAPPLTVSEDEIDLGLSLLGQAIERAL
MSLNDDATFWRNARHHLVRYGGTFEPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFS
EMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPA
AVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLL
ILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDV
VQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPG
MGGVFRIAPPLTVSEDEIDLGLSLLGQAIERAL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Burkholderia
Escherichia
sample
292
Burkholderia cepacia
562
Escherichia coli
3.13
60.67
pdbx_database_status
struct_conf
struct_conf_type
repository
Initial release
Version format compliance
Non-polymer description
Version format compliance
Derived calculations
Other
1
0
1994-10-15
1
1
2008-03-03
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1993-06-18
REL
NA
SODIUM ION
K
POTASSIUM ION
PLP
PYRIDOXAL-5'-PHOSPHATE
MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
HOH
water
SEQUENCE NUMBER IS THAT FROM SWISS-PROT ENTRY
CYS 308
SEQUENCE ADVISORY NOTICE
DIFFERENCE BETWEEN SWISS-PROT AND PDB SEQUENCE.
SWISS-PROT ENTRY NAME: DGDA_BURCE
SWISS-PROT RESIDUE PDB SEQRES
NAME NUMBER NAME CHAIN SEQ/INSERT CODE
GLN 14 HIS 15
GLU 51 GLN 52
GLY 80 GLU 81
ILE 81 MET 82
VAL 82 LEU 83
ARG 307 PRO 308
PRO 309 LEU 309
GLY 312 ALA 312
THE PUBLISHED AMINO ACID SEQUENCE (REFERENCE 1) HAS BEEN
CORRECTED (J.W. KELLER, PRIVATE COMMUNICATION). THE
SEQUENCE PRESENTED IN THIS ENTRY IS THE CORRECTED SEQUENCE.
THE FIRST TWO RESIDUES ARE NOT INCLUDED IN THE MODEL SINCE
THEY ARE DISORDERED.
NA
435
2
NA
NA
435
A
K
436
3
K
K
436
A
PLP
272
4
PLP
PLP
437
A
MES
434
5
MES
MES
434
A
HOH
501
6
HOH
HOH
501
A
HOH
502
6
HOH
HOH
502
A
HOH
503
6
HOH
HOH
503
A
HOH
504
6
HOH
HOH
504
A
HOH
505
6
HOH
HOH
505
A
HOH
506
6
HOH
HOH
506
A
HOH
507
6
HOH
HOH
507
A
HOH
508
6
HOH
HOH
508
A
HOH
509
6
HOH
HOH
509
A
HOH
510
6
HOH
HOH
510
A
HOH
511
6
HOH
HOH
511
A
HOH
512
6
HOH
HOH
512
A
HOH
513
6
HOH
HOH
513
A
HOH
514
6
HOH
HOH
514
A
HOH
515
6
HOH
HOH
515
A
HOH
516
6
HOH
HOH
516
A
HOH
517
6
HOH
HOH
517
A
HOH
518
6
HOH
HOH
518
A
HOH
519
6
HOH
HOH
519
A
HOH
520
6
HOH
HOH
520
A
HOH
521
6
HOH
HOH
521
A
HOH
522
6
HOH
HOH
522
A
HOH
523
6
HOH
HOH
523
A
HOH
524
6
HOH
HOH
524
A
HOH
525
6
HOH
HOH
525
A
HOH
526
6
HOH
HOH
526
A
HOH
527
6
HOH
HOH
527
A
HOH
528
6
HOH
HOH
528
A
HOH
529
6
HOH
HOH
529
A
HOH
530
6
HOH
HOH
530
A
HOH
531
6
HOH
HOH
531
A
HOH
532
6
HOH
HOH
532
A
HOH
533
6
HOH
HOH
533
A
HOH
534
6
HOH
HOH
534
A
HOH
535
6
HOH
HOH
535
A
HOH
536
6
HOH
HOH
536
A
HOH
537
6
HOH
HOH
537
A
HOH
538
6
HOH
HOH
538
A
HOH
539
6
HOH
HOH
539
A
HOH
540
6
HOH
HOH
540
A
HOH
541
6
HOH
HOH
541
A
HOH
542
6
HOH
HOH
542
A
HOH
543
6
HOH
HOH
543
A
HOH
544
6
HOH
HOH
544
A
HOH
545
6
HOH
HOH
545
A
HOH
546
6
HOH
HOH
546
A
HOH
547
6
HOH
HOH
547
A
HOH
548
6
HOH
HOH
548
A
HOH
549
6
HOH
HOH
549
A
HOH
550
6
HOH
HOH
550
A
HOH
551
6
HOH
HOH
551
A
HOH
552
6
HOH
HOH
552
A
HOH
553
6
HOH
HOH
553
A
HOH
554
6
HOH
HOH
554
A
HOH
555
6
HOH
HOH
555
A
HOH
556
6
HOH
HOH
556
A
HOH
557
6
HOH
HOH
557
A
HOH
558
6
HOH
HOH
558
A
HOH
559
6
HOH
HOH
559
A
HOH
560
6
HOH
HOH
560
A
HOH
561
6
HOH
HOH
561
A
HOH
562
6
HOH
HOH
562
A
HOH
563
6
HOH
HOH
563
A
HOH
564
6
HOH
HOH
564
A
HOH
565
6
HOH
HOH
565
A
HOH
566
6
HOH
HOH
566
A
HOH
567
6
HOH
HOH
567
A
HOH
568
6
HOH
HOH
568
A
HOH
569
6
HOH
HOH
569
A
HOH
570
6
HOH
HOH
570
A
HOH
571
6
HOH
HOH
571
A
HOH
572
6
HOH
HOH
572
A
HOH
573
6
HOH
HOH
573
A
HOH
574
6
HOH
HOH
574
A
HOH
575
6
HOH
HOH
575
A
HOH
576
6
HOH
HOH
576
A
HOH
577
6
HOH
HOH
577
A
HOH
578
6
HOH
HOH
578
A
HOH
579
6
HOH
HOH
579
A
HOH
580
6
HOH
HOH
580
A
HOH
581
6
HOH
HOH
581
A
HOH
582
6
HOH
HOH
582
A
HOH
583
6
HOH
HOH
583
A
HOH
584
6
HOH
HOH
584
A
HOH
585
6
HOH
HOH
585
A
HOH
586
6
HOH
HOH
586
A
HOH
587
6
HOH
HOH
587
A
HOH
588
6
HOH
HOH
588
A
HOH
589
6
HOH
HOH
589
A
HOH
590
6
HOH
HOH
590
A
HOH
591
6
HOH
HOH
591
A
HOH
592
6
HOH
HOH
592
A
HOH
593
6
HOH
HOH
593
A
HOH
594
6
HOH
HOH
594
A
HOH
595
6
HOH
HOH
595
A
HOH
596
6
HOH
HOH
596
A
HOH
597
6
HOH
HOH
597
A
HOH
598
6
HOH
HOH
598
A
HOH
599
6
HOH
HOH
599
A
HOH
600
6
HOH
HOH
600
A
HOH
601
6
HOH
HOH
601
A
HOH
602
6
HOH
HOH
602
A
HOH
603
6
HOH
HOH
603
A
HOH
604
6
HOH
HOH
604
A
HOH
605
6
HOH
HOH
605
A
HOH
606
6
HOH
HOH
606
A
HOH
607
6
HOH
HOH
607
A
HOH
608
6
HOH
HOH
608
A
HOH
609
6
HOH
HOH
609
A
HOH
610
6
HOH
HOH
610
A
HOH
611
6
HOH
HOH
611
A
HOH
612
6
HOH
HOH
612
A
HOH
613
6
HOH
HOH
613
A
HOH
614
6
HOH
HOH
614
A
HOH
615
6
HOH
HOH
615
A
HOH
616
6
HOH
HOH
616
A
HOH
617
6
HOH
HOH
617
A
HOH
618
6
HOH
HOH
618
A
HOH
619
6
HOH
HOH
619
A
HOH
620
6
HOH
HOH
620
A
HOH
621
6
HOH
HOH
621
A
HOH
622
6
HOH
HOH
622
A
HOH
623
6
HOH
HOH
623
A
HOH
624
6
HOH
HOH
624
A
HOH
625
6
HOH
HOH
625
A
HOH
626
6
HOH
HOH
626
A
HOH
627
6
HOH
HOH
627
A
HOH
628
6
HOH
HOH
628
A
HOH
629
6
HOH
HOH
629
A
HOH
630
6
HOH
HOH
630
A
HOH
631
6
HOH
HOH
631
A
HOH
632
6
HOH
HOH
632
A
HOH
633
6
HOH
HOH
633
A
HOH
634
6
HOH
HOH
634
A
HOH
635
6
HOH
HOH
635
A
HOH
636
6
HOH
HOH
636
A
HOH
637
6
HOH
HOH
637
A
HOH
638
6
HOH
HOH
638
A
HOH
639
6
HOH
HOH
639
A
HOH
640
6
HOH
HOH
640
A
HOH
641
6
HOH
HOH
641
A
HOH
642
6
HOH
HOH
642
A
HOH
643
6
HOH
HOH
643
A
HOH
644
6
HOH
HOH
644
A
HOH
645
6
HOH
HOH
645
A
n
1
1
A
n
2
2
A
LEU
3
n
3
LEU
3
A
ASN
4
n
4
ASN
4
A
ASP
5
n
5
ASP
5
A
ASP
6
n
6
ASP
6
A
ALA
7
n
7
ALA
7
A
THR
8
n
8
THR
8
A
PHE
9
n
9
PHE
9
A
TRP
10
n
10
TRP
10
A
ARG
11
n
11
ARG
11
A
ASN
12
n
12
ASN
12
A
ALA
13
n
13
ALA
13
A
ARG
14
n
14
ARG
14
A
HIS
15
n
15
HIS
15
A
HIS
16
n
16
HIS
16
A
LEU
17
n
17
LEU
17
A
VAL
18
n
18
VAL
18
A
ARG
19
n
19
ARG
19
A
TYR
20
n
20
TYR
20
A
GLY
21
n
21
GLY
21
A
GLY
22
n
22
GLY
22
A
THR
23
n
23
THR
23
A
PHE
24
n
24
PHE
24
A
GLU
25
n
25
GLU
25
A
PRO
26
n
26
PRO
26
A
MET
27
n
27
MET
27
A
ILE
28
n
28
ILE
28
A
ILE
29
n
29
ILE
29
A
GLU
30
n
30
GLU
30
A
ARG
31
n
31
ARG
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
GLY
34
n
34
GLY
34
A
SER
35
n
35
SER
35
A
PHE
36
n
36
PHE
36
A
VAL
37
n
37
VAL
37
A
TYR
38
n
38
TYR
38
A
ASP
39
n
39
ASP
39
A
ALA
40
n
40
ALA
40
A
ASP
41
n
41
ASP
41
A
GLY
42
n
42
GLY
42
A
ARG
43
n
43
ARG
43
A
ALA
44
n
44
ALA
44
A
ILE
45
n
45
ILE
45
A
LEU
46
n
46
LEU
46
A
ASP
47
n
47
ASP
47
A
PHE
48
n
48
PHE
48
A
THR
49
n
49
THR
49
A
SER
50
n
50
SER
50
A
GLY
51
n
51
GLY
51
A
GLN
52
n
52
GLN
52
A
MET
53
n
53
MET
53
A
SER
54
n
54
SER
54
A
ALA
55
n
55
ALA
55
A
VAL
56
n
56
VAL
56
A
LEU
57
n
57
LEU
57
A
GLY
58
n
58
GLY
58
A
HIS
59
n
59
HIS
59
A
CYS
60
n
60
CYS
60
A
HIS
61
n
61
HIS
61
A
PRO
62
n
62
PRO
62
A
GLU
63
n
63
GLU
63
A
ILE
64
n
64
ILE
64
A
VAL
65
n
65
VAL
65
A
SER
66
n
66
SER
66
A
VAL
67
n
67
VAL
67
A
ILE
68
n
68
ILE
68
A
GLY
69
n
69
GLY
69
A
GLU
70
n
70
GLU
70
A
TYR
71
n
71
TYR
71
A
ALA
72
n
72
ALA
72
A
GLY
73
n
73
GLY
73
A
LYS
74
n
74
LYS
74
A
LEU
75
n
75
LEU
75
A
ASP
76
n
76
ASP
76
A
HIS
77
n
77
HIS
77
A
LEU
78
n
78
LEU
78
A
PHE
79
n
79
PHE
79
A
SER
80
n
80
SER
80
A
GLU
81
n
81
GLU
81
A
MET
82
n
82
MET
82
A
LEU
83
n
83
LEU
83
A
SER
84
n
84
SER
84
A
ARG
85
n
85
ARG
85
A
PRO
86
n
86
PRO
86
A
VAL
87
n
87
VAL
87
A
VAL
88
n
88
VAL
88
A
ASP
89
n
89
ASP
89
A
LEU
90
n
90
LEU
90
A
ALA
91
n
91
ALA
91
A
THR
92
n
92
THR
92
A
ARG
93
n
93
ARG
93
A
LEU
94
n
94
LEU
94
A
ALA
95
n
95
ALA
95
A
ASN
96
n
96
ASN
96
A
ILE
97
n
97
ILE
97
A
THR
98
n
98
THR
98
A
PRO
99
n
99
PRO
99
A
PRO
100
n
100
PRO
100
A
GLY
101
n
101
GLY
101
A
LEU
102
n
102
LEU
102
A
ASP
103
n
103
ASP
103
A
ARG
104
n
104
ARG
104
A
ALA
105
n
105
ALA
105
A
LEU
106
n
106
LEU
106
A
LEU
107
n
107
LEU
107
A
LEU
108
n
108
LEU
108
A
SER
109
n
109
SER
109
A
THR
110
n
110
THR
110
A
GLY
111
n
111
GLY
111
A
ALA
112
n
112
ALA
112
A
GLU
113
n
113
GLU
113
A
SER
114
n
114
SER
114
A
ASN
115
n
115
ASN
115
A
GLU
116
n
116
GLU
116
A
ALA
117
n
117
ALA
117
A
ALA
118
n
118
ALA
118
A
ILE
119
n
119
ILE
119
A
ARG
120
n
120
ARG
120
A
MET
121
n
121
MET
121
A
ALA
122
n
122
ALA
122
A
LYS
123
n
123
LYS
123
A
LEU
124
n
124
LEU
124
A
VAL
125
n
125
VAL
125
A
THR
126
n
126
THR
126
A
GLY
127
n
127
GLY
127
A
LYS
128
n
128
LYS
128
A
TYR
129
n
129
TYR
129
A
GLU
130
n
130
GLU
130
A
ILE
131
n
131
ILE
131
A
VAL
132
n
132
VAL
132
A
GLY
133
n
133
GLY
133
A
PHE
134
n
134
PHE
134
A
ALA
135
n
135
ALA
135
A
GLN
136
n
136
GLN
136
A
SER
137
n
137
SER
137
A
TRP
138
n
138
TRP
138
A
HIS
139
n
139
HIS
139
A
GLY
140
n
140
GLY
140
A
MET
141
n
141
MET
141
A
THR
142
n
142
THR
142
A
GLY
143
n
143
GLY
143
A
ALA
144
n
144
ALA
144
A
ALA
145
n
145
ALA
145
A
ALA
146
n
146
ALA
146
A
SER
147
n
147
SER
147
A
ALA
148
n
148
ALA
148
A
THR
149
n
149
THR
149
A
TYR
150
n
150
TYR
150
A
SER
151
n
151
SER
151
A
ALA
152
n
152
ALA
152
A
GLY
153
n
153
GLY
153
A
ARG
154
n
154
ARG
154
A
LYS
155
n
155
LYS
155
A
GLY
156
n
156
GLY
156
A
VAL
157
n
157
VAL
157
A
GLY
158
n
158
GLY
158
A
PRO
159
n
159
PRO
159
A
ALA
160
n
160
ALA
160
A
ALA
161
n
161
ALA
161
A
VAL
162
n
162
VAL
162
A
GLY
163
n
163
GLY
163
A
SER
164
n
164
SER
164
A
PHE
165
n
165
PHE
165
A
ALA
166
n
166
ALA
166
A
ILE
167
n
167
ILE
167
A
PRO
168
n
168
PRO
168
A
ALA
169
n
169
ALA
169
A
PRO
170
n
170
PRO
170
A
PHE
171
n
171
PHE
171
A
THR
172
n
172
THR
172
A
TYR
173
n
173
TYR
173
A
ARG
174
n
174
ARG
174
A
PRO
175
n
175
PRO
175
A
ARG
176
n
176
ARG
176
A
PHE
177
n
177
PHE
177
A
GLU
178
n
178
GLU
178
A
ARG
179
n
179
ARG
179
A
ASN
180
n
180
ASN
180
A
GLY
181
n
181
GLY
181
A
ALA
182
n
182
ALA
182
A
TYR
183
n
183
TYR
183
A
ASP
184
n
184
ASP
184
A
TYR
185
n
185
TYR
185
A
LEU
186
n
186
LEU
186
A
ALA
187
n
187
ALA
187
A
GLU
188
n
188
GLU
188
A
LEU
189
n
189
LEU
189
A
ASP
190
n
190
ASP
190
A
TYR
191
n
191
TYR
191
A
ALA
192
n
192
ALA
192
A
PHE
193
n
193
PHE
193
A
ASP
194
n
194
ASP
194
A
LEU
195
n
195
LEU
195
A
ILE
196
n
196
ILE
196
A
ASP
197
n
197
ASP
197
A
ARG
198
n
198
ARG
198
A
GLN
199
n
199
GLN
199
A
SER
200
n
200
SER
200
A
SER
201
n
201
SER
201
A
GLY
202
n
202
GLY
202
A
ASN
203
n
203
ASN
203
A
LEU
204
n
204
LEU
204
A
ALA
205
n
205
ALA
205
A
ALA
206
n
206
ALA
206
A
PHE
207
n
207
PHE
207
A
ILE
208
n
208
ILE
208
A
ALA
209
n
209
ALA
209
A
GLU
210
n
210
GLU
210
A
PRO
211
n
211
PRO
211
A
ILE
212
n
212
ILE
212
A
LEU
213
n
213
LEU
213
A
SER
214
n
214
SER
214
A
SER
215
n
215
SER
215
A
GLY
216
n
216
GLY
216
A
GLY
217
n
217
GLY
217
A
ILE
218
n
218
ILE
218
A
ILE
219
n
219
ILE
219
A
GLU
220
n
220
GLU
220
A
LEU
221
n
221
LEU
221
A
PRO
222
n
222
PRO
222
A
ASP
223
n
223
ASP
223
A
GLY
224
n
224
GLY
224
A
TYR
225
n
225
TYR
225
A
MET
226
n
226
MET
226
A
ALA
227
n
227
ALA
227
A
ALA
228
n
228
ALA
228
A
LEU
229
n
229
LEU
229
A
LYS
230
n
230
LYS
230
A
ARG
231
n
231
ARG
231
A
LYS
232
n
232
LYS
232
A
CYS
233
n
233
CYS
233
A
GLU
234
n
234
GLU
234
A
ALA
235
n
235
ALA
235
A
ARG
236
n
236
ARG
236
A
GLY
237
n
237
GLY
237
A
MET
238
n
238
MET
238
A
LEU
239
n
239
LEU
239
A
LEU
240
n
240
LEU
240
A
ILE
241
n
241
ILE
241
A
LEU
242
n
242
LEU
242
A
ASP
243
n
243
ASP
243
A
GLU
244
n
244
GLU
244
A
ALA
245
n
245
ALA
245
A
GLN
246
n
246
GLN
246
A
THR
247
n
247
THR
247
A
GLY
248
n
248
GLY
248
A
VAL
249
n
249
VAL
249
A
GLY
250
n
250
GLY
250
A
ARG
251
n
251
ARG
251
A
THR
252
n
252
THR
252
A
GLY
253
n
253
GLY
253
A
THR
254
n
254
THR
254
A
MET
255
n
255
MET
255
A
PHE
256
n
256
PHE
256
A
ALA
257
n
257
ALA
257
A
CYS
258
n
258
CYS
258
A
GLN
259
n
259
GLN
259
A
ARG
260
n
260
ARG
260
A
ASP
261
n
261
ASP
261
A
GLY
262
n
262
GLY
262
A
VAL
263
n
263
VAL
263
A
THR
264
n
264
THR
264
A
PRO
265
n
265
PRO
265
A
ASP
266
n
266
ASP
266
A
ILE
267
n
267
ILE
267
A
LEU
268
n
268
LEU
268
A
THR
269
n
269
THR
269
A
LEU
270
n
270
LEU
270
A
SER
271
n
271
SER
271
A
LYS
272
n
272
LYS
272
A
THR
273
n
273
THR
273
A
LEU
274
n
274
LEU
274
A
GLY
275
n
275
GLY
275
A
ALA
276
n
276
ALA
276
A
GLY
277
n
277
GLY
277
A
LEU
278
n
278
LEU
278
A
PRO
279
n
279
PRO
279
A
LEU
280
n
280
LEU
280
A
ALA
281
n
281
ALA
281
A
ALA
282
n
282
ALA
282
A
ILE
283
n
283
ILE
283
A
VAL
284
n
284
VAL
284
A
THR
285
n
285
THR
285
A
SER
286
n
286
SER
286
A
ALA
287
n
287
ALA
287
A
ALA
288
n
288
ALA
288
A
ILE
289
n
289
ILE
289
A
GLU
290
n
290
GLU
290
A
GLU
291
n
291
GLU
291
A
ARG
292
n
292
ARG
292
A
ALA
293
n
293
ALA
293
A
HIS
294
n
294
HIS
294
A
GLU
295
n
295
GLU
295
A
LEU
296
n
296
LEU
296
A
GLY
297
n
297
GLY
297
A
TYR
298
n
298
TYR
298
A
LEU
299
n
299
LEU
299
A
PHE
300
n
300
PHE
300
A
TYR
301
n
301
TYR
301
A
THR
302
n
302
THR
302
A
THR
303
n
303
THR
303
A
HIS
304
n
304
HIS
304
A
VAL
305
n
305
VAL
305
A
SER
306
n
306
SER
306
A
ASP
307
n
307
ASP
307
A
PRO
308
n
308
PRO
308
A
LEU
309
n
309
LEU
309
A
PRO
310
n
310
PRO
310
A
ALA
311
n
311
ALA
311
A
ALA
312
n
312
ALA
312
A
VAL
313
n
313
VAL
313
A
GLY
314
n
314
GLY
314
A
LEU
315
n
315
LEU
315
A
ARG
316
n
316
ARG
316
A
VAL
317
n
317
VAL
317
A
LEU
318
n
318
LEU
318
A
ASP
319
n
319
ASP
319
A
VAL
320
n
320
VAL
320
A
VAL
321
n
321
VAL
321
A
GLN
322
n
322
GLN
322
A
ARG
323
n
323
ARG
323
A
ASP
324
n
324
ASP
324
A
GLY
325
n
325
GLY
325
A
LEU
326
n
326
LEU
326
A
VAL
327
n
327
VAL
327
A
ALA
328
n
328
ALA
328
A
ARG
329
n
329
ARG
329
A
ALA
330
n
330
ALA
330
A
ASN
331
n
331
ASN
331
A
VAL
332
n
332
VAL
332
A
MET
333
n
333
MET
333
A
GLY
334
n
334
GLY
334
A
ASP
335
n
335
ASP
335
A
ARG
336
n
336
ARG
336
A
LEU
337
n
337
LEU
337
A
ARG
338
n
338
ARG
338
A
ARG
339
n
339
ARG
339
A
GLY
340
n
340
GLY
340
A
LEU
341
n
341
LEU
341
A
LEU
342
n
342
LEU
342
A
ASP
343
n
343
ASP
343
A
LEU
344
n
344
LEU
344
A
MET
345
n
345
MET
345
A
GLU
346
n
346
GLU
346
A
ARG
347
n
347
ARG
347
A
PHE
348
n
348
PHE
348
A
ASP
349
n
349
ASP
349
A
CYS
350
n
350
CYS
350
A
ILE
351
n
351
ILE
351
A
GLY
352
n
352
GLY
352
A
ASP
353
n
353
ASP
353
A
VAL
354
n
354
VAL
354
A
ARG
355
n
355
ARG
355
A
GLY
356
n
356
GLY
356
A
ARG
357
n
357
ARG
357
A
GLY
358
n
358
GLY
358
A
LEU
359
n
359
LEU
359
A
LEU
360
n
360
LEU
360
A
LEU
361
n
361
LEU
361
A
GLY
362
n
362
GLY
362
A
VAL
363
n
363
VAL
363
A
GLU
364
n
364
GLU
364
A
ILE
365
n
365
ILE
365
A
VAL
366
n
366
VAL
366
A
LYS
367
n
367
LYS
367
A
ASP
368
n
368
ASP
368
A
ARG
369
n
369
ARG
369
A
ARG
370
n
370
ARG
370
A
THR
371
n
371
THR
371
A
LYS
372
n
372
LYS
372
A
GLU
373
n
373
GLU
373
A
PRO
374
n
374
PRO
374
A
ALA
375
n
375
ALA
375
A
ASP
376
n
376
ASP
376
A
GLY
377
n
377
GLY
377
A
LEU
378
n
378
LEU
378
A
GLY
379
n
379
GLY
379
A
ALA
380
n
380
ALA
380
A
LYS
381
n
381
LYS
381
A
ILE
382
n
382
ILE
382
A
THR
383
n
383
THR
383
A
ARG
384
n
384
ARG
384
A
GLU
385
n
385
GLU
385
A
CYS
386
n
386
CYS
386
A
MET
387
n
387
MET
387
A
ASN
388
n
388
ASN
388
A
LEU
389
n
389
LEU
389
A
GLY
390
n
390
GLY
390
A
LEU
391
n
391
LEU
391
A
SER
392
n
392
SER
392
A
MET
393
n
393
MET
393
A
ASN
394
n
394
ASN
394
A
ILE
395
n
395
ILE
395
A
VAL
396
n
396
VAL
396
A
GLN
397
n
397
GLN
397
A
LEU
398
n
398
LEU
398
A
PRO
399
n
399
PRO
399
A
GLY
400
n
400
GLY
400
A
MET
401
n
401
MET
401
A
GLY
402
n
402
GLY
402
A
GLY
403
n
403
GLY
403
A
VAL
404
n
404
VAL
404
A
PHE
405
n
405
PHE
405
A
ARG
406
n
406
ARG
406
A
ILE
407
n
407
ILE
407
A
ALA
408
n
408
ALA
408
A
PRO
409
n
409
PRO
409
A
PRO
410
n
410
PRO
410
A
LEU
411
n
411
LEU
411
A
THR
412
n
412
THR
412
A
VAL
413
n
413
VAL
413
A
SER
414
n
414
SER
414
A
GLU
415
n
415
GLU
415
A
ASP
416
n
416
ASP
416
A
GLU
417
n
417
GLU
417
A
ILE
418
n
418
ILE
418
A
ASP
419
n
419
ASP
419
A
LEU
420
n
420
LEU
420
A
GLY
421
n
421
GLY
421
A
LEU
422
n
422
LEU
422
A
SER
423
n
423
SER
423
A
LEU
424
n
424
LEU
424
A
LEU
425
n
425
LEU
425
A
GLY
426
n
426
GLY
426
A
GLN
427
n
427
GLN
427
A
ALA
428
n
428
ALA
428
A
ILE
429
n
429
ILE
429
A
GLU
430
n
430
GLU
430
A
ARG
431
n
431
ARG
431
A
ALA
432
n
432
ALA
432
A
LEU
433
n
433
LEU
433
A
author_defined_assembly
4
tetrameric
A
ALA
95
A
O
ALA
95
1_555
A
NA
435
B
NA
NA
1_555
A
HOH
573
F
O
HOH
1_555
97.1
A
ALA
95
A
O
ALA
95
1_555
A
NA
435
B
NA
NA
1_555
A
PRO
99
A
O
PRO
99
1_555
164.9
A
HOH
573
F
O
HOH
1_555
A
NA
435
B
NA
NA
1_555
A
PRO
99
A
O
PRO
99
1_555
95.7
A
ALA
95
A
O
ALA
95
1_555
A
NA
435
B
NA
NA
1_555
A
THR
98
A
O
THR
98
1_555
89.5
A
HOH
573
F
O
HOH
1_555
A
NA
435
B
NA
NA
1_555
A
THR
98
A
O
THR
98
1_555
125.0
A
PRO
99
A
O
PRO
99
1_555
A
NA
435
B
NA
NA
1_555
A
THR
98
A
O
THR
98
1_555
76.6
A
ALA
95
A
O
ALA
95
1_555
A
NA
435
B
NA
NA
1_555
A
THR
98
A
OG1
THR
98
1_555
74.9
A
HOH
573
F
O
HOH
1_555
A
NA
435
B
NA
NA
1_555
A
THR
98
A
OG1
THR
98
1_555
160.8
A
PRO
99
A
O
PRO
99
1_555
A
NA
435
B
NA
NA
1_555
A
THR
98
A
OG1
THR
98
1_555
95.1
A
THR
98
A
O
THR
98
1_555
A
NA
435
B
NA
NA
1_555
A
THR
98
A
OG1
THR
98
1_555
73.1
A
ALA
95
A
O
ALA
95
1_555
A
NA
435
B
NA
NA
1_555
A
LEU
102
A
O
LEU
102
1_555
94.1
A
HOH
573
F
O
HOH
1_555
A
NA
435
B
NA
NA
1_555
A
LEU
102
A
O
LEU
102
1_555
83.7
A
PRO
99
A
O
PRO
99
1_555
A
NA
435
B
NA
NA
1_555
A
LEU
102
A
O
LEU
102
1_555
95.2
A
THR
98
A
O
THR
98
1_555
A
NA
435
B
NA
NA
1_555
A
LEU
102
A
O
LEU
102
1_555
150.5
A
THR
98
A
OG1
THR
98
1_555
A
NA
435
B
NA
NA
1_555
A
LEU
102
A
O
LEU
102
1_555
79.6
A
HOH
530
F
O
HOH
1_555
A
K
436
C
K
K
1_555
A
LEU
78
A
O
LEU
78
1_555
72.1
A
HOH
530
F
O
HOH
1_555
A
K
436
C
K
K
1_555
A
SER
80
A
OG
SER
80
1_555
106.4
A
LEU
78
A
O
LEU
78
1_555
A
K
436
C
K
K
1_555
A
SER
80
A
OG
SER
80
1_555
101.7
A
HOH
530
F
O
HOH
1_555
A
K
436
C
K
K
1_555
A
THR
303
A
O
THR
303
1_555
178.1
A
LEU
78
A
O
LEU
78
1_555
A
K
436
C
K
K
1_555
A
THR
303
A
O
THR
303
1_555
106.6
A
SER
80
A
OG
SER
80
1_555
A
K
436
C
K
K
1_555
A
THR
303
A
O
THR
303
1_555
75.1
A
HOH
530
F
O
HOH
1_555
A
K
436
C
K
K
1_555
A
ASP
307
A
OD1
ASP
307
1_555
83.3
A
LEU
78
A
O
LEU
78
1_555
A
K
436
C
K
K
1_555
A
ASP
307
A
OD1
ASP
307
1_555
82.0
A
SER
80
A
OG
SER
80
1_555
A
K
436
C
K
K
1_555
A
ASP
307
A
OD1
ASP
307
1_555
170.3
A
THR
303
A
O
THR
303
1_555
A
K
436
C
K
K
1_555
A
ASP
307
A
OD1
ASP
307
1_555
95.3
A
HOH
530
F
O
HOH
1_555
A
K
436
C
K
K
1_555
A
VAL
305
A
O
VAL
305
1_555
78.1
A
LEU
78
A
O
LEU
78
1_555
A
K
436
C
K
K
1_555
A
VAL
305
A
O
VAL
305
1_555
150.2
A
SER
80
A
OG
SER
80
1_555
A
K
436
C
K
K
1_555
A
VAL
305
A
O
VAL
305
1_555
87.1
A
THR
303
A
O
THR
303
1_555
A
K
436
C
K
K
1_555
A
VAL
305
A
O
VAL
305
1_555
103.2
A
ASP
307
A
OD1
ASP
307
1_555
A
K
436
C
K
K
1_555
A
VAL
305
A
O
VAL
305
1_555
94.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_555
y,x,-z+1/3
crystal symmetry operation
0.0000000000
0.0000000000
28.8666666667
0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
10_665
-y+1,-x+1,-z+1/3
crystal symmetry operation
76.3500000000
132.2420791579
28.8666666667
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
4_665
-x+1,-y+1,z
crystal symmetry operation
76.3500000000
132.2420791579
0.0000000000
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
A
NH2
O
ARG
HOH
176
594
2.19
1
-6.64
0.90
118.30
111.66
A
A
A
CB
CG
OD2
ASP
ASP
ASP
5
5
5
N
1
7.83
0.90
118.30
126.13
A
A
A
CB
CG
OD1
ASP
ASP
ASP
6
6
6
N
1
-7.39
0.90
118.30
110.91
A
A
A
CB
CG
OD2
ASP
ASP
ASP
6
6
6
N
1
8.95
1.40
123.60
132.55
A
A
A
CD
NE
CZ
ARG
ARG
ARG
11
11
11
N
1
3.47
0.50
120.30
123.77
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
14
14
14
N
1
-15.62
2.10
122.30
106.68
A
A
A
C
N
CA
PRO
GLY
GLY
100
101
101
Y
1
6.17
0.90
118.30
124.47
A
A
A
CB
CG
OD1
ASP
ASP
ASP
190
190
190
N
1
-7.60
0.90
118.30
110.70
A
A
A
CB
CG
OD2
ASP
ASP
ASP
190
190
190
N
1
5.97
0.90
118.30
124.27
A
A
A
CB
CG
OD1
ASP
ASP
ASP
197
197
197
N
1
-5.48
0.90
118.30
112.82
A
A
A
CB
CG
OD2
ASP
ASP
ASP
197
197
197
N
1
-5.58
0.90
118.30
112.72
A
A
A
CB
CG
OD1
ASP
ASP
ASP
223
223
223
N
1
-5.63
0.90
118.30
112.67
A
A
A
CB
CG
OD1
ASP
ASP
ASP
261
261
261
N
1
5.77
0.90
118.30
124.07
A
A
A
CB
CG
OD1
ASP
ASP
ASP
266
266
266
N
1
-6.00
0.90
118.30
112.30
A
A
A
CB
CG
OD2
ASP
ASP
ASP
266
266
266
N
1
-10.62
1.50
110.50
99.88
A
A
A
N
CA
CB
SER
SER
SER
271
271
271
N
1
6.95
0.90
118.30
125.25
A
A
A
CB
CG
OD1
ASP
ASP
ASP
307
307
307
N
1
-7.79
0.90
118.30
110.51
A
A
A
CB
CG
OD2
ASP
ASP
ASP
307
307
307
N
1
5.74
0.90
118.30
124.04
A
A
A
CB
CG
OD1
ASP
ASP
ASP
319
319
319
N
1
11.76
1.80
110.60
122.36
A
A
A
N
CA
CB
ARG
ARG
ARG
323
323
323
N
1
5.70
0.90
118.30
124.00
A
A
A
CB
CG
OD1
ASP
ASP
ASP
343
343
343
N
1
-5.93
0.90
118.30
112.37
A
A
A
CB
CG
OD2
ASP
ASP
ASP
343
343
343
N
1
5.81
0.90
118.30
124.11
A
A
A
CB
CG
OD1
ASP
ASP
ASP
349
349
349
N
1
-6.47
0.90
118.30
111.83
A
A
A
CB
CG
OD2
ASP
ASP
ASP
349
349
349
N
1
-5.57
0.90
118.30
112.73
A
A
A
CB
CG
OD2
ASP
ASP
ASP
353
353
353
N
1
-5.69
0.90
118.30
112.61
A
A
A
CB
CG
OD1
ASP
ASP
ASP
368
368
368
N
1
5.42
0.90
118.30
123.72
A
A
A
CB
CG
OD2
ASP
ASP
ASP
368
368
368
N
1
-11.58
1.90
111.40
99.82
A
A
A
CB
CA
C
VAL
VAL
VAL
413
413
413
N
1
-5.74
0.90
118.30
112.56
A
A
A
CB
CG
OD1
ASP
ASP
ASP
416
416
416
N
1
5.66
0.90
118.30
123.96
A
A
A
CB
CG
OD2
ASP
ASP
ASP
416
416
416
N
1
5.52
0.90
118.30
123.82
A
A
A
CB
CG
OD1
ASP
ASP
ASP
419
419
419
N
1
-5.54
0.90
118.30
112.76
A
A
A
CB
CG
OD2
ASP
ASP
ASP
419
419
419
N
1
A
A
C
N
GLY
GLN
51
52
0.220
0.023
1.336
1.556
Y
1
A
A
C
N
GLN
MET
52
53
0.177
0.023
1.336
1.513
Y
1
A
A
CD
OE2
GLU
GLU
70
70
0.069
0.011
1.252
1.321
N
1
A
A
CD
OE2
GLU
GLU
178
178
0.070
0.011
1.252
1.322
N
1
A
A
CD
OE1
GLU
GLU
220
220
0.081
0.011
1.252
1.333
N
1
A
A
CD
OE1
GLU
GLU
234
234
0.068
0.011
1.252
1.320
N
1
A
ASP
6
-45.56
101.80
1
A
PRO
26
-88.61
46.16
1
A
ALA
55
-62.16
64.12
1
A
ASP
76
-109.92
-72.77
1
A
LEU
108
-128.00
-156.69
1
A
ASN
180
38.72
78.62
1
A
GLU
244
-93.63
40.60
1
A
SER
271
-157.05
-100.57
1
A
PHE
300
-154.78
70.50
1
A
ASP
324
-66.36
0.63
1
A
LEU
359
-94.03
34.54
1
A
ASP
376
-51.74
92.04
1
A
ALA
408
-150.16
80.35
0.1760000
2.6
8.0
1
2.6
8.0
145
3426
29
0
3252
0.013
2.5
refinement
TNT
2,2-DIALKYLGLYCINE DECARBOXYLASE (PYRUVATE) (E.C.4.1.1.64)
DIALKYLGLYCINE DECARBOXYLASE STRUCTURE: BIFUNCTIONAL ACTIVE SITE AND ALKALI METAL BINDING SITES
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
DIALKYLGLYCINE DECARBOXYLASE IS A TETRAMER OF IDENTICAL
SUBUNITS. THE FOLLOWING TRANSFORMATIONS WILL GENERATE THE
OTHER THREE SUBUNITS OF THE TETRAMER WHEN APPLIED TO THE
COORDINATES PRESENTED IN THIS ENTRY:
MTRIX1 1 -0.500000 0.866010 0.000000 0.00000
MTRIX2 1 0.866041 0.500000 0.000000 0.00000
MTRIX3 1 0.000000 0.000000 -1.000000 28.86753
MTRIX1 2 0.500000 -0.866010 0.000000 76.34753
MTRIX2 2 -0.866041 -0.500000 0.000000 132.24016
MTRIX3 2 0.000000 0.000000 -1.000000 28.86753
MTRIX1 3 -1.000000 0.000000 0.000000 76.34753
MTRIX2 3 0.000000 -1.000000 0.000000 132.24016
MTRIX3 3 0.000000 0.000000 1.000000 0.00000
A
ALA
7
A
ALA
7
HELX_P
A
HIS
16
A
HIS
16
1
H1
10
A
PRO
62
A
PRO
62
HELX_P
A
ALA
72
A
ALA
72
1
H2
11
A
ARG
85
A
ARG
85
HELX_P
A
ILE
97
A
ILE
97
1
H3
13
A
GLY
111
A
GLY
111
HELX_P
A
THR
126
A
THR
126
1
H4
16
A
GLY
143
A
GLY
143
HELX_P
A
SER
147
A
SER
147
1
H5
5
A
TYR
185
A
TYR
185
HELX_P
A
GLN
199
A
GLN
199
1
H6
15
A
TYR
225
A
TYR
225
HELX_P
A
ALA
235
A
ALA
235
1
H7
11
A
ALA
257
A
ALA
257
HELX_P
A
ASP
261
A
ASP
261
1
H8
5
A
ALA
287
A
ALA
287
HELX_P
A
LEU
296
A
LEU
296
1
H9
10
A
PRO
308
A
PRO
308
HELX_P
A
ARG
323
A
ARG
323
1
H10
16
A
LEU
326
A
LEU
326
HELX_P
A
ARG
347
A
ARG
347
1
H11
22
A
LEU
378
A
LEU
378
HELX_P
A
LEU
389
A
LEU
389
1
H12
12
A
GLU
415
A
GLU
415
HELX_P
A
ARG
431
A
ARG
431
1
H13
17
covale
1.328
A
LYS
272
A
NZ
LYS
272
1_555
A
PLP
437
D
C4A
PLP
1_555
metalc
2.332
A
NA
435
B
NA
NA
1_555
A
ALA
95
A
O
ALA
95
1_555
metalc
2.204
A
NA
435
B
NA
NA
1_555
A
HOH
573
F
O
HOH
1_555
metalc
2.101
A
NA
435
B
NA
NA
1_555
A
PRO
99
A
O
PRO
99
1_555
metalc
2.419
A
NA
435
B
NA
NA
1_555
A
THR
98
A
O
THR
98
1_555
metalc
2.735
A
K
436
C
K
K
1_555
A
HOH
530
F
O
HOH
1_555
metalc
2.699
A
K
436
C
K
K
1_555
A
LEU
78
A
O
LEU
78
1_555
metalc
2.843
A
K
436
C
K
K
1_555
A
SER
80
A
OG
SER
80
1_555
metalc
2.745
A
K
436
C
K
K
1_555
A
THR
303
A
O
THR
303
1_555
metalc
2.473
A
K
436
C
K
K
1_555
A
ASP
307
A
OD1
ASP
307
1_555
metalc
2.873
A
K
436
C
K
K
1_555
A
VAL
305
A
O
VAL
305
1_555
metalc
2.646
A
THR
98
A
OG1
THR
98
1_555
A
NA
435
B
NA
NA
1_555
metalc
2.615
A
LEU
102
A
O
LEU
102
1_555
A
NA
435
B
NA
NA
1_555
LYASE(DECARBOXYLASE)
LYASE(DECARBOXYLASE)
DGDA_BURCE
UNP
1
1
P16932
SLNDDATFWRNARQHLVRYGGTFEPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSG
MLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAA
VGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLI
LDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVV
QRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGM
GGVFRIAPPLTVSEDEIDLGLSLLGQAIERAL
1
432
1DKA
2
433
P16932
A
1
2
433
1
GLN
CONFLICT
HIS
15
1DKA
A
P16932
UNP
14
15
1
GLY
CONFLICT
GLU
81
1DKA
A
P16932
UNP
80
81
3
7
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
30
A
GLU
30
A
LYS
33
A
LYS
33
A
PHE
36
A
PHE
36
A
ASP
39
A
ASP
39
A
ARG
43
A
ARG
43
A
ASP
47
A
ASP
47
A
ARG
104
A
ARG
104
A
SER
109
A
SER
109
A
LEU
280
A
LEU
280
A
THR
285
A
THR
285
A
ASP
266
A
ASP
266
A
LEU
270
A
LEU
270
A
LEU
239
A
LEU
239
A
GLU
244
A
GLU
244
A
LEU
204
A
LEU
204
A
ALA
209
A
ALA
209
A
GLU
130
A
GLU
130
A
PHE
134
A
PHE
134
A
GLY
163
A
GLY
163
A
ILE
167
A
ILE
167
A
CYS
350
A
CYS
350
A
ARG
357
A
ARG
357
A
LEU
360
A
LEU
360
A
VAL
366
A
VAL
366
A
GLY
403
A
GLY
403
A
ILE
407
A
ILE
407
A
ASN
394
A
ASN
394
A
VAL
396
A
VAL
396
METAL BINDING SITE 1. LIGANDS TO THE SODIUM ION NA+ 435 ARE INDICATED
Author
4
METAL BINDING SITE 2. LIGANDS TO THE POTASSIUM ION 436 ARE INDICATED
Author
5
BINDING SITE FOR RESIDUE NA A 435
Software
5
BINDING SITE FOR RESIDUE K A 436
Software
6
BINDING SITE FOR RESIDUE PLP A 437
Software
19
BINDING SITE FOR RESIDUE MES A 434
Software
8
A
ALA
95
A
ALA
95
4
1_555
A
THR
98
A
THR
98
4
1_555
A
PRO
99
A
PRO
99
4
1_555
A
LEU
102
A
LEU
102
4
1_555
A
LEU
78
A
LEU
78
5
1_555
A
SER
80
A
SER
80
5
1_555
A
THR
303
A
THR
303
5
1_555
A
VAL
305
A
VAL
305
5
1_555
A
ASP
307
A
ASP
307
5
1_555
A
ALA
95
A
ALA
95
5
1_555
A
THR
98
A
THR
98
5
1_555
A
PRO
99
A
PRO
99
5
1_555
A
LEU
102
A
LEU
102
5
1_555
A
HOH
573
F
HOH
5
1_555
A
LEU
78
A
LEU
78
6
1_555
A
SER
80
A
SER
80
6
1_555
A
THR
303
A
THR
303
6
1_555
A
VAL
305
A
VAL
305
6
1_555
A
ASP
307
A
ASP
307
6
1_555
A
HOH
530
F
HOH
6
1_555
A
THR
110
A
THR
110
19
1_555
A
GLY
111
A
GLY
111
19
1_555
A
ALA
112
A
ALA
112
19
1_555
A
ASN
115
A
ASN
115
19
1_555
A
TRP
138
A
TRP
138
19
1_555
A
HIS
139
A
HIS
139
19
1_555
A
GLU
210
A
GLU
210
19
1_555
A
ASP
243
A
ASP
243
19
1_555
A
ALA
245
A
ALA
245
19
1_555
A
GLN
246
A
GLN
246
19
1_555
A
LYS
272
A
LYS
272
19
1_555
A
THR
302
A
THR
302
19
7_555
A
THR
303
A
THR
303
19
7_555
A
MES
434
E
MES
19
1_555
A
HOH
502
F
HOH
19
1_555
A
HOH
512
F
HOH
19
1_555
A
HOH
518
F
HOH
19
7_555
A
HOH
540
F
HOH
19
1_555
A
HOH
550
F
HOH
19
1_555
A
GLN
52
A
GLN
52
8
1_555
A
TRP
138
A
TRP
138
8
1_555
A
SER
215
A
SER
215
8
1_555
A
GLN
246
A
GLN
246
8
1_555
A
LYS
272
A
LYS
272
8
1_555
A
TYR
301
A
TYR
301
8
7_555
A
ARG
406
A
ARG
406
8
1_555
A
PLP
437
D
PLP
8
1_555
181
P 64 2 2