0.010582 0.000000 0.000000 0.000000 0.008576 0.000000 0.000000 0.000000 0.026882 0.00000 0.00000 0.00000 Zhu, X. Zhao, X. Burkholder, W.F. Gragerov, A. Ogata, C.M. Gottesman, M.E. Hendrickson, W.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 94.500 116.600 37.200 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N C N 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing US Science SCIEAS 0038 0036-8075 272 1606 1614 8658133 Structural analysis of substrate binding by the molecular chaperone DnaK. 1996 10.2210/pdb1dkx/pdb pdb_00001dkx 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 23806.752 SUBSTRATE BINDING DOMAIN OF DNAK 1 nat polymer 786.941 SUBSTRATE PEPTIDE (7 RESIDUES) 1 man polymer 18.015 water 216 nat water no no VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRK QVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRK QVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHA A polypeptide(L) no no NRLLLTG NRLLLTG B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia sample 562 Escherichia coli 2.08 43. chem_comp_atom chem_comp_bond database_2 pdbx_database_status struct_ref_seq_dif repository Initial release Version format compliance Derived calculations Version format compliance Data collection Database references Other 1 0 1996-12-07 1 1 2008-03-24 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_ref_seq_dif.details Y BNL 1996-06-03 REL HOH water HOH 2000 3 HOH HOH 2000 A HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2032 3 HOH HOH 2032 A HOH 2033 3 HOH HOH 2033 A HOH 2034 3 HOH HOH 2034 A HOH 2035 3 HOH HOH 2035 A HOH 2036 3 HOH HOH 2036 A HOH 2037 3 HOH HOH 2037 A HOH 2038 3 HOH HOH 2038 A HOH 2039 3 HOH HOH 2039 A HOH 2041 3 HOH HOH 2041 A HOH 2042 3 HOH HOH 2042 A HOH 2044 3 HOH HOH 2044 A HOH 2045 3 HOH HOH 2045 A HOH 2046 3 HOH HOH 2046 A HOH 2047 3 HOH HOH 2047 A HOH 2049 3 HOH HOH 2049 A HOH 2051 3 HOH HOH 2051 A HOH 2052 3 HOH HOH 2052 A HOH 2053 3 HOH HOH 2053 A HOH 2054 3 HOH HOH 2054 A HOH 2055 3 HOH HOH 2055 A HOH 2056 3 HOH HOH 2056 A HOH 2057 3 HOH HOH 2057 A HOH 2058 3 HOH HOH 2058 A HOH 2059 3 HOH HOH 2059 A HOH 2060 3 HOH HOH 2060 A HOH 2063 3 HOH HOH 2063 A HOH 2064 3 HOH HOH 2064 A HOH 2065 3 HOH HOH 2065 A HOH 2067 3 HOH HOH 2067 A HOH 2068 3 HOH HOH 2068 A HOH 2070 3 HOH HOH 2070 A HOH 2072 3 HOH HOH 2072 A HOH 2075 3 HOH HOH 2075 A HOH 2080 3 HOH HOH 2080 A HOH 2081 3 HOH HOH 2081 A HOH 2082 3 HOH HOH 2082 A HOH 2085 3 HOH HOH 2085 A HOH 2086 3 HOH HOH 2086 A HOH 2087 3 HOH HOH 2087 A HOH 2088 3 HOH HOH 2088 A HOH 2089 3 HOH HOH 2089 A HOH 2092 3 HOH HOH 2092 A HOH 2093 3 HOH HOH 2093 A HOH 2095 3 HOH HOH 2095 A HOH 2098 3 HOH HOH 2098 A HOH 2099 3 HOH HOH 2099 A HOH 2102 3 HOH HOH 2102 A HOH 2104 3 HOH HOH 2104 A HOH 2105 3 HOH HOH 2105 A HOH 2107 3 HOH HOH 2107 A HOH 2108 3 HOH HOH 2108 A HOH 2111 3 HOH HOH 2111 A HOH 2113 3 HOH HOH 2113 A HOH 2114 3 HOH HOH 2114 A HOH 2116 3 HOH HOH 2116 A HOH 2120 3 HOH HOH 2120 A HOH 2121 3 HOH HOH 2121 A HOH 2122 3 HOH HOH 2122 A HOH 2123 3 HOH HOH 2123 A HOH 2125 3 HOH HOH 2125 A HOH 2128 3 HOH HOH 2128 A HOH 2129 3 HOH HOH 2129 A HOH 2130 3 HOH HOH 2130 A HOH 2131 3 HOH HOH 2131 A HOH 2133 3 HOH HOH 2133 A HOH 2134 3 HOH HOH 2134 A HOH 2135 3 HOH HOH 2135 A HOH 2137 3 HOH HOH 2137 A HOH 2138 3 HOH HOH 2138 A HOH 2139 3 HOH HOH 2139 A HOH 2140 3 HOH HOH 2140 A HOH 2142 3 HOH HOH 2142 A HOH 2143 3 HOH HOH 2143 A HOH 2145 3 HOH HOH 2145 A HOH 2146 3 HOH HOH 2146 A HOH 2147 3 HOH HOH 2147 A HOH 2149 3 HOH HOH 2149 A HOH 2153 3 HOH HOH 2153 A HOH 2157 3 HOH HOH 2157 A HOH 2158 3 HOH HOH 2158 A HOH 2159 3 HOH HOH 2159 A HOH 2161 3 HOH HOH 2161 A HOH 2162 3 HOH HOH 2162 A HOH 2163 3 HOH HOH 2163 A HOH 2165 3 HOH HOH 2165 A HOH 2167 3 HOH HOH 2167 A HOH 2170 3 HOH HOH 2170 A HOH 2171 3 HOH HOH 2171 A HOH 2172 3 HOH HOH 2172 A HOH 2173 3 HOH HOH 2173 A HOH 2176 3 HOH HOH 2176 A HOH 2177 3 HOH HOH 2177 A HOH 2178 3 HOH HOH 2178 A HOH 2179 3 HOH HOH 2179 A HOH 2181 3 HOH HOH 2181 A HOH 2182 3 HOH HOH 2182 A HOH 2183 3 HOH HOH 2183 A HOH 2185 3 HOH HOH 2185 A HOH 2186 3 HOH HOH 2186 A HOH 2192 3 HOH HOH 2192 A HOH 2193 3 HOH HOH 2193 A HOH 2194 3 HOH HOH 2194 A HOH 2195 3 HOH HOH 2195 A HOH 2196 3 HOH HOH 2196 A HOH 2197 3 HOH HOH 2197 A HOH 2198 3 HOH HOH 2198 A HOH 2200 3 HOH HOH 2200 A HOH 2202 3 HOH HOH 2202 A HOH 2203 3 HOH HOH 2203 A HOH 2205 3 HOH HOH 2205 A HOH 2207 3 HOH HOH 2207 A HOH 2208 3 HOH HOH 2208 A HOH 2212 3 HOH HOH 2212 A HOH 2214 3 HOH HOH 2214 A HOH 2215 3 HOH HOH 2215 A HOH 2218 3 HOH HOH 2218 A HOH 2222 3 HOH HOH 2222 A HOH 2224 3 HOH HOH 2224 A HOH 2225 3 HOH HOH 2225 A HOH 2226 3 HOH HOH 2226 A HOH 2230 3 HOH HOH 2230 A HOH 2231 3 HOH HOH 2231 A HOH 3201 3 HOH HOH 3201 A HOH 3202 3 HOH HOH 3202 A HOH 3204 3 HOH HOH 3204 A HOH 3207 3 HOH HOH 3207 A HOH 3209 3 HOH HOH 3209 A HOH 3210 3 HOH HOH 3210 A HOH 3216 3 HOH HOH 3216 A HOH 3217 3 HOH HOH 3217 A HOH 3219 3 HOH HOH 3219 A HOH 3220 3 HOH HOH 3220 A HOH 3223 3 HOH HOH 3223 A HOH 3224 3 HOH HOH 3224 A HOH 3225 3 HOH HOH 3225 A HOH 3226 3 HOH HOH 3226 A HOH 3227 3 HOH HOH 3227 A HOH 3229 3 HOH HOH 3229 A HOH 3230 3 HOH HOH 3230 A HOH 3231 3 HOH HOH 3231 A HOH 3232 3 HOH HOH 3232 A HOH 3233 3 HOH HOH 3233 A HOH 3234 3 HOH HOH 3234 A HOH 3238 3 HOH HOH 3238 A HOH 3240 3 HOH HOH 3240 A HOH 3241 3 HOH HOH 3241 A HOH 3244 3 HOH HOH 3244 A HOH 3402 3 HOH HOH 3402 A HOH 3403 3 HOH HOH 3403 A HOH 3404 3 HOH HOH 3404 A HOH 3405 3 HOH HOH 3405 A HOH 3407 3 HOH HOH 3407 A HOH 3408 3 HOH HOH 3408 A HOH 3411 3 HOH HOH 3411 A HOH 3413 3 HOH HOH 3413 A HOH 3414 3 HOH HOH 3414 A HOH 3415 3 HOH HOH 3415 A HOH 3416 3 HOH HOH 3416 A HOH 3418 3 HOH HOH 3418 A HOH 3419 3 HOH HOH 3419 A HOH 3420 3 HOH HOH 3420 A HOH 3421 3 HOH HOH 3421 A HOH 3422 3 HOH HOH 3422 A HOH 3423 3 HOH HOH 3423 A HOH 3424 3 HOH HOH 3424 A HOH 3425 3 HOH HOH 3425 A HOH 3500 3 HOH HOH 3500 A HOH 3501 3 HOH HOH 3501 A HOH 3502 3 HOH HOH 3502 A HOH 3503 3 HOH HOH 3503 A HOH 3504 3 HOH HOH 3504 A HOH 3506 3 HOH HOH 3506 A HOH 3507 3 HOH HOH 3507 A HOH 3600 3 HOH HOH 3600 A HOH 3601 3 HOH HOH 3601 A HOH 3602 3 HOH HOH 3602 A HOH 3603 3 HOH HOH 3603 A HOH 3604 3 HOH HOH 3604 A HOH 3605 3 HOH HOH 3605 A HOH 3606 3 HOH HOH 3606 A HOH 3608 3 HOH HOH 3608 A HOH 3609 3 HOH HOH 3609 A HOH 3610 3 HOH HOH 3610 A HOH 3650 3 HOH HOH 3650 A HOH 3653 3 HOH HOH 3653 A HOH 2019 3 HOH HOH 2019 B HOH 2031 3 HOH HOH 2031 B HOH 2160 3 HOH HOH 2160 B HOH 2169 3 HOH HOH 2169 B HOH 2201 3 HOH HOH 2201 B HOH 2227 3 HOH HOH 2227 B VAL 389 n 1 VAL 389 A LEU 390 n 2 LEU 390 A LEU 391 n 3 LEU 391 A LEU 392 n 4 LEU 392 A ASP 393 n 5 ASP 393 A VAL 394 n 6 VAL 394 A THR 395 n 7 THR 395 A PRO 396 n 8 PRO 396 A LEU 397 n 9 LEU 397 A SER 398 n 10 SER 398 A LEU 399 n 11 LEU 399 A GLY 400 n 12 GLY 400 A ILE 401 n 13 ILE 401 A GLU 402 n 14 GLU 402 A THR 403 n 15 THR 403 A MET 404 n 16 MET 404 A GLY 405 n 17 GLY 405 A GLY 406 n 18 GLY 406 A VAL 407 n 19 VAL 407 A MET 408 n 20 MET 408 A THR 409 n 21 THR 409 A THR 410 n 22 THR 410 A LEU 411 n 23 LEU 411 A ILE 412 n 24 ILE 412 A ALA 413 n 25 ALA 413 A LYS 414 n 26 LYS 414 A ASN 415 n 27 ASN 415 A THR 416 n 28 THR 416 A THR 417 n 29 THR 417 A ILE 418 n 30 ILE 418 A PRO 419 n 31 PRO 419 A THR 420 n 32 THR 420 A LYS 421 n 33 LYS 421 A HIS 422 n 34 HIS 422 A SER 423 n 35 SER 423 A GLN 424 n 36 GLN 424 A VAL 425 n 37 VAL 425 A PHE 426 n 38 PHE 426 A SER 427 n 39 SER 427 A THR 428 n 40 THR 428 A ALA 429 n 41 ALA 429 A GLU 430 n 42 GLU 430 A ASP 431 n 43 ASP 431 A ASN 432 n 44 ASN 432 A GLN 433 n 45 GLN 433 A SER 434 n 46 SER 434 A ALA 435 n 47 ALA 435 A VAL 436 n 48 VAL 436 A THR 437 n 49 THR 437 A ILE 438 n 50 ILE 438 A HIS 439 n 51 HIS 439 A VAL 440 n 52 VAL 440 A LEU 441 n 53 LEU 441 A GLN 442 n 54 GLN 442 A GLY 443 n 55 GLY 443 A GLU 444 n 56 GLU 444 A ARG 445 n 57 ARG 445 A LYS 446 n 58 LYS 446 A ARG 447 n 59 ARG 447 A ALA 448 n 60 ALA 448 A ALA 449 n 61 ALA 449 A ASP 450 n 62 ASP 450 A ASN 451 n 63 ASN 451 A LYS 452 n 64 LYS 452 A SER 453 n 65 SER 453 A LEU 454 n 66 LEU 454 A GLY 455 n 67 GLY 455 A GLN 456 n 68 GLN 456 A PHE 457 n 69 PHE 457 A ASN 458 n 70 ASN 458 A LEU 459 n 71 LEU 459 A ASP 460 n 72 ASP 460 A GLY 461 n 73 GLY 461 A ILE 462 n 74 ILE 462 A ASN 463 n 75 ASN 463 A PRO 464 n 76 PRO 464 A ALA 465 n 77 ALA 465 A PRO 466 n 78 PRO 466 A ARG 467 n 79 ARG 467 A GLY 468 n 80 GLY 468 A MET 469 n 81 MET 469 A PRO 470 n 82 PRO 470 A GLN 471 n 83 GLN 471 A ILE 472 n 84 ILE 472 A GLU 473 n 85 GLU 473 A VAL 474 n 86 VAL 474 A THR 475 n 87 THR 475 A PHE 476 n 88 PHE 476 A ASP 477 n 89 ASP 477 A ILE 478 n 90 ILE 478 A ASP 479 n 91 ASP 479 A ALA 480 n 92 ALA 480 A ASP 481 n 93 ASP 481 A GLY 482 n 94 GLY 482 A ILE 483 n 95 ILE 483 A LEU 484 n 96 LEU 484 A HIS 485 n 97 HIS 485 A VAL 486 n 98 VAL 486 A SER 487 n 99 SER 487 A ALA 488 n 100 ALA 488 A LYS 489 n 101 LYS 489 A ASP 490 n 102 ASP 490 A LYS 491 n 103 LYS 491 A ASN 492 n 104 ASN 492 A SER 493 n 105 SER 493 A GLY 494 n 106 GLY 494 A LYS 495 n 107 LYS 495 A GLU 496 n 108 GLU 496 A GLN 497 n 109 GLN 497 A LYS 498 n 110 LYS 498 A ILE 499 n 111 ILE 499 A THR 500 n 112 THR 500 A ILE 501 n 113 ILE 501 A LYS 502 n 114 LYS 502 A ALA 503 n 115 ALA 503 A SER 504 n 116 SER 504 A SER 505 n 117 SER 505 A GLY 506 n 118 GLY 506 A LEU 507 n 119 LEU 507 A ASN 508 n 120 ASN 508 A GLU 509 n 121 GLU 509 A ASP 510 n 122 ASP 510 A GLU 511 n 123 GLU 511 A ILE 512 n 124 ILE 512 A GLN 513 n 125 GLN 513 A LYS 514 n 126 LYS 514 A MET 515 n 127 MET 515 A VAL 516 n 128 VAL 516 A ARG 517 n 129 ARG 517 A ASP 518 n 130 ASP 518 A ALA 519 n 131 ALA 519 A GLU 520 n 132 GLU 520 A ALA 521 n 133 ALA 521 A ASN 522 n 134 ASN 522 A ALA 523 n 135 ALA 523 A GLU 524 n 136 GLU 524 A ALA 525 n 137 ALA 525 A ASP 526 n 138 ASP 526 A ARG 527 n 139 ARG 527 A LYS 528 n 140 LYS 528 A PHE 529 n 141 PHE 529 A ASP 530 n 142 ASP 530 A GLU 531 n 143 GLU 531 A LEU 532 n 144 LEU 532 A VAL 533 n 145 VAL 533 A GLN 534 n 146 GLN 534 A THR 535 n 147 THR 535 A ARG 536 n 148 ARG 536 A ASN 537 n 149 ASN 537 A GLN 538 n 150 GLN 538 A GLY 539 n 151 GLY 539 A ASP 540 n 152 ASP 540 A HIS 541 n 153 HIS 541 A LEU 542 n 154 LEU 542 A LEU 543 n 155 LEU 543 A HIS 544 n 156 HIS 544 A SER 545 n 157 SER 545 A THR 546 n 158 THR 546 A ARG 547 n 159 ARG 547 A LYS 548 n 160 LYS 548 A GLN 549 n 161 GLN 549 A VAL 550 n 162 VAL 550 A GLU 551 n 163 GLU 551 A GLU 552 n 164 GLU 552 A ALA 553 n 165 ALA 553 A GLY 554 n 166 GLY 554 A ASP 555 n 167 ASP 555 A LYS 556 n 168 LYS 556 A LEU 557 n 169 LEU 557 A PRO 558 n 170 PRO 558 A ALA 559 n 171 ALA 559 A ASP 560 n 172 ASP 560 A ASP 561 n 173 ASP 561 A LYS 562 n 174 LYS 562 A THR 563 n 175 THR 563 A ALA 564 n 176 ALA 564 A ILE 565 n 177 ILE 565 A GLU 566 n 178 GLU 566 A SER 567 n 179 SER 567 A ALA 568 n 180 ALA 568 A LEU 569 n 181 LEU 569 A THR 570 n 182 THR 570 A ALA 571 n 183 ALA 571 A LEU 572 n 184 LEU 572 A GLU 573 n 185 GLU 573 A THR 574 n 186 THR 574 A ALA 575 n 187 ALA 575 A LEU 576 n 188 LEU 576 A LYS 577 n 189 LYS 577 A GLY 578 n 190 GLY 578 A GLU 579 n 191 GLU 579 A ASP 580 n 192 ASP 580 A LYS 581 n 193 LYS 581 A ALA 582 n 194 ALA 582 A ALA 583 n 195 ALA 583 A ILE 584 n 196 ILE 584 A GLU 585 n 197 GLU 585 A ALA 586 n 198 ALA 586 A LYS 587 n 199 LYS 587 A MET 588 n 200 MET 588 A GLN 589 n 201 GLN 589 A GLU 590 n 202 GLU 590 A LEU 591 n 203 LEU 591 A ALA 592 n 204 ALA 592 A GLN 593 n 205 GLN 593 A VAL 594 n 206 VAL 594 A SER 595 n 207 SER 595 A GLN 596 n 208 GLN 596 A LYS 597 n 209 LYS 597 A LEU 598 n 210 LEU 598 A MET 599 n 211 MET 599 A GLU 600 n 212 GLU 600 A ILE 601 n 213 ILE 601 A ALA 602 n 214 ALA 602 A GLN 603 n 215 GLN 603 A GLN 604 n 216 GLN 604 A GLN 605 n 217 GLN 605 A HIS 606 n 218 HIS 606 A ALA 607 n 219 ALA 607 A ASN 1 n 1 ASN 1 B ARG 2 n 2 ARG 2 B LEU 3 n 3 LEU 3 B LEU 4 n 4 LEU 4 B LEU 5 n 5 LEU 5 B THR 6 n 6 THR 6 B GLY 7 n 7 GLY 7 B author_and_software_defined_assembly PISA,PQS 4 tetrameric software_defined_assembly PISA 8 octameric 5960 -23 21430 16600 -73 38190 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 3_657 -x+1,y,-z+2 crystal symmetry operation 94.5000000000 0.0000000000 74.4000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_675 -x+1,-y+2,z crystal symmetry operation 94.5000000000 233.2000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_577 x,-y+2,-z+2 crystal symmetry operation 0.0000000000 233.2000000000 74.4000000000 A O VAL 407 A O VAL 19 A N THR 403 A N THR 15 A O GLY 400 A O GLY 12 A N LEU 441 A N LEU 53 A O VAL 436 A O VAL 48 A N LEU 459 A N LEU 71 B O ARG 2 B O ARG 2 A N SER 427 A N SER 39 A O THR 420 A O THR 32 A N ILE 478 A N ILE 90 A O GLU 473 A O GLU 85 A N LYS 489 A N LYS 101 A O LEU 484 A O LEU 96 A N ILE 501 A N ILE 113 1 A CG LEU 391 A CG LEU 3 1 Y 1 A CD1 LEU 391 A CD1 LEU 3 1 Y 1 A CD2 LEU 391 A CD2 LEU 3 1 Y 1 A CG GLN 604 A CG GLN 216 1 Y 1 A CD GLN 604 A CD GLN 216 1 Y 1 A OE1 GLN 604 A OE1 GLN 216 1 Y 1 A NE2 GLN 604 A NE2 GLN 216 1 Y 1 A CG GLN 605 A CG GLN 217 1 Y 1 A CD GLN 605 A CD GLN 217 1 Y 1 A OE1 GLN 605 A OE1 GLN 217 1 Y 1 A NE2 GLN 605 A NE2 GLN 217 1 Y 1 A CG HIS 606 A CG HIS 218 1 Y 1 A ND1 HIS 606 A ND1 HIS 218 1 Y 1 A CD2 HIS 606 A CD2 HIS 218 1 Y 1 A CE1 HIS 606 A CE1 HIS 218 1 Y 1 A NE2 HIS 606 A NE2 HIS 218 1 Y 1 A LEU 392 27.30 A 1 A A LEU ASP 392 393 A A 148.07 1 A ASP 393 A 0.410 SIDE CHAIN 1 -53.90 1.90 110.20 56.30 A A A CB CA C LEU LEU LEU 392 392 392 A A A N 1 -17.09 2.00 110.40 93.31 A A A N CA CB LEU LEU LEU 392 392 392 A A A N 1 -47.14 3.00 110.50 63.36 A A A CD1 CG CD2 LEU LEU LEU 392 392 392 A A A N 1 -49.70 1.70 111.00 61.30 A A A CB CG CD1 LEU LEU LEU 392 392 392 A A A N 1 10.25 1.70 111.00 121.25 A A A CB CG CD2 LEU LEU LEU 392 392 392 A A A N 1 -30.99 2.70 111.00 80.01 A A A N CA C LEU LEU LEU 392 392 392 A A A N 1 -50.91 2.20 117.20 66.29 A A A CA C N LEU LEU ASP 392 392 393 A A A Y 1 -64.72 1.60 122.70 57.98 A A A O C N LEU LEU ASP 392 392 393 A A A Y 1 -18.17 2.00 110.40 92.23 A A A CB CA C ASP ASP ASP 393 393 393 A A A N 1 -25.66 1.80 110.60 84.94 A A A N CA CB ASP ASP ASP 393 393 393 A A A N 1 -43.58 2.20 113.40 69.82 A A A CA CB CG ASP ASP ASP 393 393 393 A A A N 1 -48.04 1.90 123.30 75.26 A A A OD1 CG OD2 ASP ASP ASP 393 393 393 A A A N 1 -18.35 0.90 118.30 99.95 A A A CB CG OD1 ASP ASP ASP 393 393 393 A A A N 1 -25.80 0.90 118.30 92.50 A A A CB CG OD2 ASP ASP ASP 393 393 393 A A A N 1 3.66 0.50 120.30 123.96 B B B NE CZ NH2 ARG ARG ARG 2 2 2 N 1 A A N CA LEU LEU 392 392 0.299 0.020 1.459 1.758 A A N 1 A A CA CB LEU LEU 392 392 0.291 0.023 1.533 1.824 A A N 1 A A CB CG LEU LEU 392 392 0.444 0.029 1.521 1.965 A A N 1 A A CG CD1 LEU LEU 392 392 0.392 0.037 1.514 1.906 A A N 1 A A C O LEU LEU 392 392 0.471 0.019 1.229 1.700 A A N 1 A A C N LEU ASP 392 393 0.222 0.023 1.336 1.558 A A Y 1 A A N CA ASP ASP 393 393 0.697 0.020 1.459 2.156 A A N 1 A A CA CB ASP ASP 393 393 -0.380 0.022 1.535 1.155 A A N 1 A A CG OD1 ASP ASP 393 393 0.751 0.023 1.249 2.000 A A N 1 A A CG OD2 ASP ASP 393 393 0.750 0.023 1.249 1.999 A A N 1 A A C O ASP ASP 393 393 0.232 0.019 1.229 1.461 A A N 1 A A CG SD MET MET 408 408 0.189 0.026 1.807 1.996 N 1 A A CG SD MET MET 515 515 0.162 0.026 1.807 1.969 N 1 A A CG SD MET MET 588 588 0.169 0.026 1.807 1.976 N 1 B B N CA GLY GLY 7 7 0.140 0.015 1.456 1.596 N 1 A LEU 392 A 172.64 104.98 1 A ASP 393 A -45.56 102.87 23.26 0.2880000 0.2060000 0.2060000 2.0 5.0 12605 5.0 89.7 1 2.0 2.0 5.0 216 1919 0 0 1703 0.008 1.3 24.0 1.29 2.0 20.0 1DKX 13579 2. 1 37. 94.9 model building X-PLOR refinement X-PLOR phasing X-PLOR THE SUBSTRATE BINDING DOMAIN OF DNAK IN COMPLEX WITH A SUBSTRATE PEPTIDE, DETERMINED FROM TYPE 1 SELENOMETHIONYL CRYSTALS 1 N N 2 N N 3 N N 3 N N A ALA 448 A ALA 60 HELX_P A ASP 450 A ASP 62 5 1 3 A GLU 509 A GLU 121 HELX_P A ALA 521 A ALA 133 1 2 13 A ALA 523 A ALA 135 HELX_P A LYS 556 A LYS 168 1 3 34 A ALA 559 A ALA 171 HELX_P A LYS 577 A LYS 189 1 4 19 A LYS 581 A LYS 193 HELX_P A VAL 594 A VAL 206 1 5 14 A GLN 596 A GLN 208 HELX_P A HIS 606 A HIS 218 1 6 11 COMPLEX (MOLECULAR CHAPERONE/PEPTIDE) DNAK, HEAT SHOCK PROTEIN 70 KDA (HSP70), COMPLEX (MOLECULAR CHAPERONE-PEPTIDE), COMPLEX (MOLECULAR CHAPERONE-PEPTIDE) complex A ILE 418 A ILE 30 1 A PRO 419 A PRO 31 -0.46 DNAK_ECOLI UNP 1 1 P0A6Y8 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE VQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIA GLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV EEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLK VALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGI ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDAD GILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADD KTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDDDVVDAEFEEVKDKK 1DKX PDB 2 1DKX 388 606 1DKX 389 607 P0A6Y8 A 1 1 219 1 7 1DKX 1 7 1DKX B 2 1 7 1 GLU conflict ASP 530 1DKX A P0A6Y8 UNP 529 142 4 5 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A VAL 407 A VAL 19 A ILE 412 A ILE 24 A LEU 399 A LEU 11 A THR 403 A THR 15 A ALA 435 A ALA 47 A GLN 442 A GLN 54 A LYS 452 A LYS 64 A ASP 460 A ASP 72 B ARG 2 B ARG 2 B LEU 4 B LEU 4 A THR 420 A THR 32 A THR 428 A THR 40 A ILE 472 A ILE 84 A ILE 478 A ILE 90 A LEU 484 A LEU 96 A ASP 490 A ASP 102 A GLU 496 A GLU 108 A ILE 501 A ILE 113 23 I 2 2 2