12.42
19.238
17.519
18.959
A
O5'
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1
ATOM
A
O5'
DC
1
1
1.00
1
O
13.07
19.358
16.740
20.144
A
C5'
DC
1
ATOM
A
C5'
DC
1
1
1.00
1
C
11.40
18.297
15.665
20.176
A
C4'
DC
1
ATOM
A
C4'
DC
1
1
1.00
1
C
12.06
17.032
16.161
20.603
A
O4'
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1
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A
O4'
DC
1
1
1.00
1
O
11.65
17.964
14.943
18.873
A
C3'
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1
ATOM
A
C3'
DC
1
1
1.00
1
C
13.46
17.556
13.606
19.068
A
O3'
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1
ATOM
A
O3'
DC
1
1
1.00
1
O
11.00
16.754
15.734
18.314
A
C2'
DC
1
ATOM
A
C2'
DC
1
1
1.00
1
C
11.21
16.023
15.967
19.626
A
C1'
DC
1
ATOM
A
C1'
DC
1
1
1.00
1
C
10.65
15.180
17.145
19.472
A
N1
DC
1
ATOM
A
N1
DC
1
1
1.00
1
N
9.86
13.853
17.008
19.245
A
C2
DC
1
ATOM
A
C2
DC
1
1
1.00
1
C
11.18
13.220
15.989
19.127
A
O2
DC
1
ATOM
A
O2
DC
1
1
1.00
1
O
9.93
13.084
18.167
19.172
A
N3
DC
1
ATOM
A
N3
DC
1
1
1.00
1
N
8.90
13.668
19.406
19.300
A
C4
DC
1
ATOM
A
C4
DC
1
1
1.00
1
C
8.58
12.853
20.428
19.218
A
N4
DC
1
ATOM
A
N4
DC
1
1
1.00
1
N
10.09
15.062
19.515
19.590
A
C5
DC
1
ATOM
A
C5
DC
1
1
1.00
1
C
10.10
15.763
18.391
19.645
A
C6
DC
1
ATOM
A
C6
DC
1
1
1.00
1
C
16.90
18.572
12.398
18.914
A
P
DG
2
ATOM
A
P
DG
1
2
1.00
1
P
19.40
19.327
12.603
17.715
A
OP1
DG
2
ATOM
A
OP1
DG
1
2
1.00
1
O
18.00
17.650
11.223
19.182
A
OP2
DG
2
ATOM
A
OP2
DG
1
2
1.00
1
O
16.77
19.606
12.588
20.189
A
O5'
DG
2
ATOM
A
O5'
DG
1
2
1.00
1
O
14.56
19.014
12.254
21.506
A
C5'
DG
2
ATOM
A
C5'
DG
1
2
1.00
1
C
14.10
20.075
12.709
22.505
A
C4'
DG
2
ATOM
A
C4'
DG
1
2
1.00
1
C
11.27
20.330
14.067
22.400
A
O4'
DG
2
ATOM
A
O4'
DG
1
2
1.00
1
O
13.67
19.533
12.479
23.944
A
C3'
DG
2
ATOM
A
C3'
DG
1
2
1.00
1
C
15.18
19.921
11.149
24.384
A
O3'
DG
2
ATOM
A
O3'
DG
1
2
1.00
1
O
12.74
20.058
13.644
24.693
A
C2'
DG
2
ATOM
A
C2'
DG
1
2
1.00
1
C
11.60
20.422
14.687
23.685
A
C1'
DG
2
ATOM
A
C1'
DG
1
2
1.00
1
C
11.01
19.507
15.834
23.649
A
N9
DG
2
ATOM
A
N9
DG
1
2
1.00
1
N
11.90
19.915
17.136
23.812
A
C8
DG
2
ATOM
A
C8
DG
1
2
1.00
1
C
11.44
18.881
17.974
23.758
A
N7
DG
2
ATOM
A
N7
DG
1
2
1.00
1
N
11.41
17.771
17.176
23.558
A
C5
DG
2
ATOM
A
C5
DG
1
2
1.00
1
C
10.60
16.391
17.484
23.372
A
C6
DG
2
ATOM
A
C6
DG
1
2
1.00
1
C
11.53
15.813
18.584
23.399
A
O6
DG
2
ATOM
A
O6
DG
1
2
1.00
1
O
10.42
15.548
16.397
23.172
A
N1
DG
2
ATOM
A
N1
DG
1
2
1.00
1
N
11.17
16.034
15.126
23.199
A
C2
DG
2
ATOM
A
C2
DG
1
2
1.00
1
C
11.57
15.101
14.189
23.027
A
N2
DG
2
ATOM
A
N2
DG
1
2
1.00
1
N
11.05
17.310
14.837
23.372
A
N3
DG
2
ATOM
A
N3
DG
1
2
1.00
1
N
10.94
18.146
15.849
23.508
A
C4
DG
2
ATOM
A
C4
DG
1
2
1.00
1
C
16.44
18.801
10.037
24.897
A
P
DC
3
ATOM
A
P
DC
1
3
1.00
1
P
16.96
19.625
8.928
25.528
A
OP1
DC
3
ATOM
A
OP1
DC
1
3
1.00
1
O
16.91
17.862
9.818
23.903
A
OP2
DC
3
ATOM
A
OP2
DC
1
3
1.00
1
O
12.90
18.282
10.937
26.164
A
O5'
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3
ATOM
A
O5'
DC
1
3
1.00
1
O
11.41
17.593
10.233
27.254
A
C5'
DC
3
ATOM
A
C5'
DC
1
3
1.00
1
C
12.10
16.202
10.784
27.431
A
C4'
DC
3
ATOM
A
C4'
DC
1
3
1.00
1
C
9.61
16.221
12.086
27.903
A
O4'
DC
3
ATOM
A
O4'
DC
1
3
1.00
1
O
10.24
15.287
10.765
26.169
A
C3'
DC
3
ATOM
A
C3'
DC
1
3
1.00
1
C
12.94
14.016
10.317
26.477
A
O3'
DC
3
ATOM
A
O3'
DC
1
3
1.00
1
O
10.36
15.303
12.226
25.710
A
C2'
DC
3
ATOM
A
C2'
DC
1
3
1.00
1
C
10.20
15.322
12.902
27.027
A
C1'
DC
3
ATOM
A
C1'
DC
1
3
1.00
1
C
9.51
15.909
14.226
27.027
A
N1
DC
3
ATOM
A
N1
DC
1
3
1.00
1
N
9.21
15.013
15.313
26.822
A
C2
DC
3
ATOM
A
C2
DC
1
3
1.00
1
C
10.12
13.843
15.045
26.750
A
O2
DC
3
ATOM
A
O2
DC
1
3
1.00
1
O
8.78
15.549
16.572
26.781
A
N3
DC
3
ATOM
A
N3
DC
1
3
1.00
1
N
9.01
16.923
16.740
26.872
A
C4
DC
3
ATOM
A
C4
DC
1
3
1.00
1
C
9.50
17.412
17.977
26.859
A
N4
DC
3
ATOM
A
N4
DC
1
3
1.00
1
N
9.47
17.799
15.650
27.036
A
C5
DC
3
ATOM
A
C5
DC
1
3
1.00
1
C
9.60
17.226
14.407
27.104
A
C6
DC
3
ATOM
A
C6
DC
1
3
1.00
1
C
12.84
13.612
8.812
26.391
A
P
DG
4
ATOM
A
P
DG
1
4
1.00
1
P
13.64
14.312
8.102
25.233
A
OP1
DG
4
ATOM
A
OP1
DG
1
4
1.00
1
O
16.28
12.133
8.635
26.364
A
OP2
DG
4
ATOM
A
OP2
DG
1
4
1.00
1
O
11.83
14.232
8.111
27.708
A
O5'
DG
4
ATOM
A
O5'
DG
1
4
1.00
1
O
9.52
13.760
8.812
28.988
A
C5'
DG
4
ATOM
A
C5'
DG
1
4
1.00
1
C
8.64
14.520
7.909
29.978
A
C4'
DG
4
ATOM
A
C4'
DG
1
4
1.00
1
C
7.13
15.850
8.143
29.796
A
O4'
DG
4
ATOM
A
O4'
DG
1
4
1.00
1
O
8.54
14.233
8.205
31.440
A
C3'
DG
4
ATOM
A
C3'
DG
1
4
1.00
1
C
8.78
13.166
7.392
31.953
A
O3'
DG
4
ATOM
A
O3'
DG
1
4
1.00
1
O
7.99
15.560
8.006
32.089
A
C2'
DG
4
ATOM
A
C2'
DG
1
4
1.00
1
C
7.99
16.577
8.283
31.090
A
C1'
DG
4
ATOM
A
C1'
DG
1
4
1.00
1
C
8.39
17.245
9.594
31.063
A
N9
DG
4
ATOM
A
N9
DG
1
4
1.00
1
N
7.80
18.650
9.744
30.981
A
C8
DG
4
ATOM
A
C8
DG
1
4
1.00
1
C
8.17
19.073
10.921
30.999
A
N7
DG
4
ATOM
A
N7
DG
1
4
1.00
1
N
7.84
17.879
11.663
30.877
A
C5
DG
4
ATOM
A
C5
DG
1
4
1.00
1
C
7.09
17.645
13.064
30.813
A
C6
DG
4
ATOM
A
C6
DG
1
4
1.00
1
C
9.72
18.497
13.902
30.627
A
O6
DG
4
ATOM
A
O6
DG
1
4
1.00
1
O
6.83
16.296
13.373
30.777
A
N1
DG
4
ATOM
A
N1
DG
1
4
1.00
1
N
7.71
15.303
12.516
30.759
A
C2
DG
4
ATOM
A
C2
DG
1
4
1.00
1
C
5.55
14.039
12.884
30.790
A
N2
DG
4
ATOM
A
N2
DG
1
4
1.00
1
N
7.25
15.443
11.192
30.986
A
N3
DG
4
ATOM
A
N3
DG
1
4
1.00
1
N
7.97
16.775
10.868
31.008
A
C4
DG
4
ATOM
A
C4
DG
1
4
1.00
1
C
7.40
14.589
11.744
34.804
A
N1
UFP
5
HETATM
A
N1
UFP
1
5
1.00
1
N
8.59
15.305
12.893
34.440
A
C2
UFP
5
HETATM
A
C2
UFP
1
5
1.00
1
C
7.89
16.608
12.793
34.341
A
N3
UFP
5
HETATM
A
N3
UFP
1
5
1.00
1
N
9.12
17.327
11.622
34.486
A
C4
UFP
5
HETATM
A
C4
UFP
1
5
1.00
1
C
8.99
16.558
10.463
34.804
A
C5
UFP
5
HETATM
A
C5
UFP
1
5
1.00
1
C
8.83
15.249
10.560
34.931
A
C6
UFP
5
HETATM
A
C6
UFP
1
5
1.00
1
C
7.27
14.690
13.958
34.409
A
O2
UFP
5
HETATM
A
O2
UFP
1
5
1.00
1
O
8.89
18.573
11.653
34.304
A
O4
UFP
5
HETATM
A
O4
UFP
1
5
1.00
1
O
13.58
17.249
9.339
34.940
A
F5
UFP
5
HETATM
A
F5
UFP
1
5
1.00
1
F
8.62
13.166
11.865
35.017
A
C1'
UFP
5
HETATM
A
C1'
UFP
1
5
1.00
1
C
9.31
12.421
11.909
33.719
A
C2'
UFP
5
HETATM
A
C2'
UFP
1
5
1.00
1
C
9.17
11.084
11.413
34.109
A
C3'
UFP
5
HETATM
A
C3'
UFP
1
5
1.00
1
C
8.10
11.352
10.407
35.244
A
C4'
UFP
5
HETATM
A
C4'
UFP
1
5
1.00
1
C
9.09
10.223
12.454
34.572
A
O3'
UFP
5
HETATM
A
O3'
UFP
1
5
1.00
1
O
8.30
12.681
10.647
35.653
A
O4'
UFP
5
HETATM
A
O4'
UFP
1
5
1.00
1
O
10.56
11.124
8.971
34.826
A
C5'
UFP
5
HETATM
A
C5'
UFP
1
5
1.00
1
C
10.41
12.204
8.682
33.918
A
O5'
UFP
5
HETATM
A
O5'
UFP
1
5
1.00
1
O
13.47
11.756
7.865
32.611
A
P
UFP
5
HETATM
A
P
UFP
1
5
1.00
1
P
12.89
11.067
6.532
32.833
A
O1P
UFP
5
HETATM
A
O1P
UFP
1
5
1.00
1
O
14.65
11.013
8.697
31.598
A
O2P
UFP
5
HETATM
A
O2P
UFP
1
5
1.00
1
O
10.50
8.647
12.395
34.581
A
P
DG
6
ATOM
A
P
DG
1
6
1.00
1
P
8.90
8.236
12.068
33.237
A
OP1
DG
6
ATOM
A
OP1
DG
1
6
1.00
1
O
9.41
8.255
13.765
35.140
A
OP2
DG
6
ATOM
A
OP2
DG
1
6
1.00
1
O
8.97
8.222
11.261
35.553
A
O5'
DG
6
ATOM
A
O5'
DG
1
6
1.00
1
O
9.86
8.045
11.485
36.956
A
C5'
DG
6
ATOM
A
C5'
DG
1
6
1.00
1
C
9.85
7.536
10.161
37.496
A
C4'
DG
6
ATOM
A
C4'
DG
1
6
1.00
1
C
10.09
8.498
9.167
37.419
A
O4'
DG
6
ATOM
A
O4'
DG
1
6
1.00
1
O
9.81
7.095
10.214
38.962
A
C3'
DG
6
ATOM
A
C3'
DG
1
6
1.00
1
C
10.38
5.934
9.329
39.180
A
O3'
DG
6
ATOM
A
O3'
DG
1
6
1.00
1
O
10.02
8.335
9.800
39.702
A
C2'
DG
6
ATOM
A
C2'
DG
1
6
1.00
1
C
9.06
8.998
8.875
38.758
A
C1'
DG
6
ATOM
A
C1'
DG
1
6
1.00
1
C
9.97
10.425
8.872
38.681
A
N9
DG
6
ATOM
A
N9
DG
1
6
1.00
1
N
10.38
11.215
7.716
38.690
A
C8
DG
6
ATOM
A
C8
DG
1
6
1.00
1
C
8.47
12.445
7.968
38.590
A
N7
DG
6
ATOM
A
N7
DG
1
6
1.00
1
N
9.60
12.570
9.361
38.622
A
C5
DG
6
ATOM
A
C5
DG
1
6
1.00
1
C
8.33
13.707
10.199
38.495
A
C6
DG
6
ATOM
A
C6
DG
1
6
1.00
1
C
8.98
14.884
9.906
38.413
A
O6
DG
6
ATOM
A
O6
DG
1
6
1.00
1
O
6.97
13.445
11.566
38.522
A
N1
DG
6
ATOM
A
N1
DG
1
6
1.00
1
N
7.98
12.096
11.965
38.508
A
C2
DG
6
ATOM
A
C2
DG
1
6
1.00
1
C
8.36
11.916
13.335
38.431
A
N2
DG
6
ATOM
A
N2
DG
1
6
1.00
1
N
8.94
11.024
11.239
38.608
A
N3
DG
6
ATOM
A
N3
DG
1
6
1.00
1
N
8.94
11.322
9.921
38.608
A
C4
DG
6
ATOM
A
C4
DG
1
6
1.00
1
C
13.28
19.060
18.609
38.009
B
O5'
DC
7
ATOM
B
O5'
DC
1
1
1.00
1
O
10.70
18.428
19.372
36.901
B
C5'
DC
7
ATOM
B
C5'
DC
1
1
1.00
1
C
10.37
16.954
19.017
36.874
B
C4'
DC
7
ATOM
B
C4'
DC
1
1
1.00
1
C
10.51
16.853
17.640
36.520
B
O4'
DC
7
ATOM
B
O4'
DC
1
1
1.00
1
O
9.51
16.124
19.173
38.145
B
C3'
DC
7
ATOM
B
C3'
DC
1
1
1.00
1
C
10.68
14.848
19.737
37.841
B
O3'
DC
7
ATOM
B
O3'
DC
1
1
1.00
1
O
10.64
15.940
17.727
38.663
B
C2'
DC
7
ATOM
B
C2'
DC
1
1
1.00
1
C
9.76
15.862
17.014
37.323
B
C1'
DC
7
ATOM
B
C1'
DC
1
1
1.00
1
C
9.36
16.268
15.584
37.482
B
N1
DC
7
ATOM
B
N1
DC
1
1
1.00
1
N
10.28
15.214
14.712
37.673
B
C2
DC
7
ATOM
B
C2
DC
1
1
1.00
1
C
10.83
14.102
15.027
37.655
B
O2
DC
7
ATOM
B
O2
DC
1
1
1.00
1
O
9.21
15.579
13.401
37.836
B
N3
DC
7
ATOM
B
N3
DC
1
1
1.00
1
N
10.11
16.848
13.027
37.836
B
C4
DC
7
ATOM
B
C4
DC
1
1
1.00
1
C
9.38
17.110
11.756
38.000
B
N4
DC
7
ATOM
B
N4
DC
1
1
1.00
1
N
9.37
17.922
13.908
37.736
B
C5
DC
7
ATOM
B
C5
DC
1
1
1.00
1
C
9.05
17.574
15.251
37.496
B
C6
DC
7
ATOM
B
C6
DC
1
1
1.00
1
C
10.27
14.435
21.285
37.818
B
P
DG
8
ATOM
B
P
DG
1
2
1.00
1
P
10.23
15.249
21.892
39.008
B
OP1
DG
8
ATOM
B
OP1
DG
1
2
1.00
1
O
11.93
13.003
21.360
37.845
B
OP2
DG
8
ATOM
B
OP2
DG
1
2
1.00
1
O
9.21
15.115
21.939
36.556
B
O5'
DG
8
ATOM
B
O5'
DG
1
2
1.00
1
O
8.00
14.740
21.665
35.190
B
C5'
DG
8
ATOM
B
C5'
DG
1
2
1.00
1
C
8.73
15.789
22.141
34.213
B
C4'
DG
8
ATOM
B
C4'
DG
1
2
1.00
1
C
7.66
17.063
21.615
34.377
B
O4'
DG
8
ATOM
B
O4'
DG
1
2
1.00
1
O
8.37
15.473
21.799
32.742
B
C3'
DG
8
ATOM
B
C3'
DG
1
2
1.00
1
C
12.22
14.707
22.901
32.234
B
O3'
DG
8
ATOM
B
O3'
DG
1
2
1.00
1
O
9.44
16.740
21.596
32.052
B
C2'
DG
8
ATOM
B
C2'
DG
1
2
1.00
1
C
8.11
17.681
21.204
33.165
B
C1'
DG
8
ATOM
B
C1'
DG
1
2
1.00
1
C
8.09
17.945
19.765
33.274
B
N9
DG
8
ATOM
B
N9
DG
1
2
1.00
1
N
7.73
19.174
19.244
33.192
B
C8
DG
8
ATOM
B
C8
DG
1
2
1.00
1
C
7.77
19.252
17.955
33.355
B
N7
DG
8
ATOM
B
N7
DG
1
2
1.00
1
N
7.74
17.919
17.550
33.464
B
C5
DG
8
ATOM
B
C5
DG
1
2
1.00
1
C
7.58
17.282
16.338
33.719
B
C6
DG
8
ATOM
B
C6
DG
1
2
1.00
1
C
6.55
17.801
15.154
33.855
B
O6
DG
8
ATOM
B
O6
DG
1
2
1.00
1
O
6.96
15.945
16.369
33.882
B
N1
DG
8
ATOM
B
N1
DG
1
2
1.00
1
N
7.92
15.199
17.484
33.832
B
C2
DG
8
ATOM
B
C2
DG
1
2
1.00
1
C
6.53
13.919
17.469
34.091
B
N2
DG
8
ATOM
B
N2
DG
1
2
1.00
1
N
6.73
15.806
18.674
33.669
B
N3
DG
8
ATOM
B
N3
DG
1
2
1.00
1
N
7.75
17.079
18.702
33.492
B
C4
DG
8
ATOM
B
C4
DG
1
2
1.00
1
C
19.77
13.577
22.986
31.317
B
P
DC
9
ATOM
B
P
DC
1
3
1.00
1
P
18.23
12.999
24.328
30.913
B
OP1
DC
9
ATOM
B
OP1
DC
1
3
1.00
1
O
17.86
12.343
22.799
32.588
B
OP2
DC
9
ATOM
B
OP2
DC
1
3
1.00
1
O
12.14
13.039
21.749
30.577
B
O5'
DC
9
ATOM
B
O5'
DC
1
3
1.00
1
O
8.99
12.008
21.777
29.592
B
C5'
DC
9
ATOM
B
C5'
DC
1
3
1.00
1
C
8.62
11.504
20.341
29.551
B
C4'
DC
9
ATOM
B
C4'
DC
1
3
1.00
1
C
6.75
12.584
19.512
29.165
B
O4'
DC
9
ATOM
B
O4'
DC
1
3
1.00
1
O
8.61
11.025
19.696
30.849
B
C3'
DC
9
ATOM
B
C3'
DC
1
3
1.00
1
C
10.54
9.866
18.896
30.568
B
O3'
DC
9
ATOM
B
O3'
DC
1
3
1.00
1
O
7.73
12.221
18.886
31.358
B
C2'
DC
9
ATOM
B
C2'
DC
1
3
1.00
1
C
7.68
12.787
18.357
30.041
B
C1'
DC
9
ATOM
B
C1'
DC
1
3
1.00
1
C
7.49
14.190
17.992
30.127
B
N1
DC
9
ATOM
B
N1
DC
1
3
1.00
1
N
7.29
14.497
16.637
30.336
B
C2
DC
9
ATOM
B
C2
DC
1
3
1.00
1
C
8.00
13.629
15.815
30.436
B
O2
DC
9
ATOM
B
O2
DC
1
3
1.00
1
O
6.49
15.789
16.238
30.305
B
N3
DC
9
ATOM
B
N3
DC
1
3
1.00
1
N
7.89
16.813
17.108
30.191
B
C4
DC
9
ATOM
B
C4
DC
1
3
1.00
1
C
9.38
18.037
16.603
30.336
B
N4
DC
9
ATOM
B
N4
DC
1
3
1.00
1
N
8.62
16.525
18.500
30.109
B
C5
DC
9
ATOM
B
C5
DC
1
3
1.00
1
C
7.87
15.266
18.899
30.023
B
C6
DC
9
ATOM
B
C6
DC
1
3
1.00
1
C
13.00
8.420
19.425
30.822
B
P
DG
10
ATOM
B
P
DG
1
4
1.00
1
P
13.95
8.303
20.388
31.953
B
OP1
DG
10
ATOM
B
OP1
DG
1
4
1.00
1
O
13.67
7.578
18.232
30.650
B
OP2
DG
10
ATOM
B
OP2
DG
1
4
1.00
1
O
11.85
8.277
20.425
29.533
B
O5'
DG
10
ATOM
B
O5'
DG
1
4
1.00
1
O
11.33
8.043
19.774
28.266
B
C5'
DG
10
ATOM
B
C5'
DG
1
4
1.00
1
C
11.17
8.144
20.883
27.226
B
C4'
DG
10
ATOM
B
C4'
DG
1
4
1.00
1
C
10.14
9.289
21.624
27.249
B
O4'
DG
10
ATOM
B
O4'
DG
1
4
1.00
1
O
10.63
8.164
20.232
25.801
B
C3'
DG
10
ATOM
B
C3'
DG
1
4
1.00
1
C
13.36
6.809
20.020
25.419
B
O3'
DG
10
ATOM
B
O3'
DG
1
4
1.00
1
O
10.62
8.963
21.188
24.997
B
C2'
DG
10
ATOM
B
C2'
DG
1
4
1.00
1
C
10.11
9.723
22.023
25.951
B
C1'
DG
10
ATOM
B
C1'
DG
1
4
1.00
1
C
9.88
11.185
21.799
25.951
B
N9
DG
10
ATOM
B
N9
DG
1
4
1.00
1
N
8.90
12.102
22.796
26.019
B
C8
DG
10
ATOM
B
C8
DG
1
4
1.00
1
C
10.16
13.319
22.350
26.155
B
N7
DG
10
ATOM
B
N7
DG
1
4
1.00
1
N
9.52
13.166
20.961
26.141
B
C5
DG
10
ATOM
B
C5
DG
1
4
1.00
1
C
9.05
14.178
19.964
26.241
B
C6
DG
10
ATOM
B
C6
DG
1
4
1.00
1
C
9.47
15.381
20.079
26.337
B
O6
DG
10
ATOM
B
O6
DG
1
4
1.00
1
O
9.27
13.603
18.690
26.309
B
N1
DG
10
ATOM
B
N1
DG
1
4
1.00
1
N
7.26
12.305
18.466
26.223
B
C2
DG
10
ATOM
B
C2
DG
1
4
1.00
1
C
6.20
11.944
17.157
26.228
B
N2
DG
10
ATOM
B
N2
DG
1
4
1.00
1
N
8.35
11.336
19.378
26.137
B
N3
DG
10
ATOM
B
N3
DG
1
4
1.00
1
N
8.64
11.845
20.618
26.082
B
C4
DG
10
ATOM
B
C4
DG
1
4
1.00
1
C
10.16
11.162
18.335
22.314
B
N1
UFP
11
HETATM
B
N1
UFP
1
5
1.00
1
N
8.69
12.477
18.083
22.573
B
C2
UFP
11
HETATM
B
C2
UFP
1
5
1.00
1
C
10.77
13.286
19.117
22.709
B
N3
UFP
11
HETATM
B
N3
UFP
1
5
1.00
1
N
9.21
12.893
20.425
22.659
B
C4
UFP
11
HETATM
B
C4
UFP
1
5
1.00
1
C
10.20
11.511
20.677
22.450
B
C5
UFP
11
HETATM
B
C5
UFP
1
5
1.00
1
C
9.85
10.699
19.618
22.269
B
C6
UFP
11
HETATM
B
C6
UFP
1
5
1.00
1
C
9.49
12.846
16.868
22.641
B
O2
UFP
11
HETATM
B
O2
UFP
1
5
1.00
1
O
11.20
13.760
21.294
22.754
B
O4
UFP
11
HETATM
B
O4
UFP
1
5
1.00
1
O
15.42
11.093
21.842
22.319
B
F5
UFP
11
HETATM
B
F5
UFP
1
5
1.00
1
F
9.13
10.232
17.204
22.196
B
C1'
UFP
11
HETATM
B
C1'
UFP
1
5
1.00
1
C
9.18
9.657
16.625
23.472
B
C2'
UFP
11
HETATM
B
C2'
UFP
1
5
1.00
1
C
10.30
8.406
15.964
22.972
B
C3'
UFP
11
HETATM
B
C3'
UFP
1
5
1.00
1
C
9.72
7.949
16.899
21.851
B
C4'
UFP
11
HETATM
B
C4'
UFP
1
5
1.00
1
C
8.48
8.666
14.647
22.391
B
O3'
UFP
11
HETATM
B
O3'
UFP
1
5
1.00
1
O
10.78
9.048
17.749
21.524
B
O4'
UFP
11
HETATM
B
O4'
UFP
1
5
1.00
1
O
11.46
6.757
17.824
22.173
B
C5'
UFP
11
HETATM
B
C5'
UFP
1
5
1.00
1
C
13.36
7.243
18.665
23.327
B
O5'
UFP
11
HETATM
B
O5'
UFP
1
5
1.00
1
O
14.72
6.371
18.650
24.734
B
P
UFP
11
HETATM
B
P
UFP
1
5
1.00
1
P
13.53
4.941
18.765
24.443
B
O1P
UFP
11
HETATM
B
O1P
UFP
1
5
1.00
1
O
13.61
6.748
17.428
25.506
B
O2P
UFP
11
HETATM
B
O2P
UFP
1
5
1.00
1
O
12.54
7.592
13.544
22.478
B
P
DG
12
ATOM
B
P
DG
1
6
1.00
1
P
12.71
6.968
13.348
23.830
B
OP1
DG
12
ATOM
B
OP1
DG
1
6
1.00
1
O
13.77
8.197
12.320
21.969
B
OP2
DG
12
ATOM
B
OP2
DG
1
6
1.00
1
O
10.88
6.388
14.080
21.592
B
O5'
DG
12
ATOM
B
O5'
DG
1
6
1.00
1
O
10.86
6.361
13.812
20.171
B
C5'
DG
12
ATOM
B
C5'
DG
1
6
1.00
1
C
9.95
5.149
14.416
19.576
B
C4'
DG
12
ATOM
B
C4'
DG
1
6
1.00
1
C
10.81
5.293
15.852
19.767
B
O4'
DG
12
ATOM
B
O4'
DG
1
6
1.00
1
O
12.07
4.911
14.204
18.115
B
C3'
DG
12
ATOM
B
C3'
DG
1
6
1.00
1
C
11.80
3.470
14.388
17.647
B
O3'
DG
12
ATOM
B
O3'
DG
1
6
1.00
1
O
11.37
5.739
15.292
17.484
B
C2'
DG
12
ATOM
B
C2'
DG
1
6
1.00
1
C
10.49
5.300
16.429
18.441
B
C1'
DG
12
ATOM
B
C1'
DG
1
6
1.00
1
C
9.77
6.211
17.531
18.378
B
N9
DG
12
ATOM
B
N9
DG
1
6
1.00
1
N
10.73
5.975
18.905
18.382
B
C8
DG
12
ATOM
B
C8
DG
1
6
1.00
1
C
11.22
7.072
19.612
18.428
B
N7
DG
12
ATOM
B
N7
DG
1
6
1.00
1
N
9.90
8.064
18.668
18.464
B
C5
DG
12
ATOM
B
C5
DG
1
6
1.00
1
C
10.24
9.499
18.877
18.650
B
C6
DG
12
ATOM
B
C6
DG
1
6
1.00
1
C
11.96
10.055
19.980
18.673
B
O6
DG
12
ATOM
B
O6
DG
1
6
1.00
1
O
10.34
10.251
17.759
18.682
B
N1
DG
12
ATOM
B
N1
DG
1
6
1.00
1
N
9.56
9.682
16.506
18.659
B
C2
DG
12
ATOM
B
C2
DG
1
6
1.00
1
C
10.12
10.548
15.510
18.791
B
N2
DG
12
ATOM
B
N2
DG
1
6
1.00
1
N
9.53
8.354
16.298
18.609
B
N3
DG
12
ATOM
B
N3
DG
1
6
1.00
1
N
10.36
7.607
17.394
18.537
B
C4
DG
12
ATOM
B
C4
DG
1
6
1.00
1
C
31.82
13.232
1.103
11.804
A
MG
MG
13
HETATM
C
MG
MG
2
1.00
1
MG
32.77
14.386
1.913
13.139
A
O
HOH
15
HETATM
D
O
HOH
3
1.00
1
O
31.61
13.563
2.704
10.587
A
O
HOH
16
HETATM
D
O
HOH
3
1.00
1
O
32.57
20.242
13.740
32.992
A
O
HOH
19
HETATM
D
O
HOH
3
1.00
1
O
17.83
15.817
11.161
22.364
A
O
HOH
21
HETATM
D
O
HOH
3
1.00
1
O
30.04
11.940
13.432
22.841
A
O
HOH
23
HETATM
D
O
HOH
3
1.00
1
O
15.78
14.853
23.116
19.440
A
O
HOH
24
HETATM
D
O
HOH
3
1.00
1
O
19.86
11.017
11.086
27.771
A
O
HOH
27
HETATM
D
O
HOH
3
1.00
1
O
32.23
13.103
4.944
28.475
A
O
HOH
28
HETATM
D
O
HOH
3
1.00
1
O
15.22
11.406
11.254
30.391
A
O
HOH
31
HETATM
D
O
HOH
3
1.00
1
O
32.23
14.294
26.001
12.267
A
O
HOH
40
HETATM
D
O
HOH
3
1.00
1
O
10.95
16.657
16.338
14.977
A
O
HOH
41
HETATM
D
O
HOH
3
1.00
1
O
29.56
16.160
15.647
11.205
A
O
HOH
44
HETATM
D
O
HOH
3
1.00
1
O
54.57
13.348
4.691
14.710
A
O
HOH
46
HETATM
D
O
HOH
3
1.00
1
O
20.95
14.938
8.074
11.441
A
O
HOH
54
HETATM
D
O
HOH
3
1.00
1
O
36.75
20.381
12.840
27.399
A
O
HOH
59
HETATM
D
O
HOH
3
1.00
1
O
39.26
13.624
9.996
22.600
A
O
HOH
63
HETATM
D
O
HOH
3
1.00
1
O
30.48
14.963
16.027
8.576
A
O
HOH
66
HETATM
D
O
HOH
3
1.00
1
O
32.35
20.799
15.360
35.099
B
O
HOH
14
HETATM
E
O
HOH
3
1.00
1
O
32.61
21.648
16.027
32.434
B
O
HOH
17
HETATM
E
O
HOH
3
1.00
1
O
32.34
23.554
15.363
34.404
B
O
HOH
18
HETATM
E
O
HOH
3
1.00
1
O
37.51
9.722
9.554
0.241
B
O
HOH
20
HETATM
E
O
HOH
3
1.00
1
O
41.61
7.442
24.471
0.295
B
O
HOH
22
HETATM
E
O
HOH
3
1.00
1
O
16.09
9.739
12.569
19.499
B
O
HOH
25
HETATM
E
O
HOH
3
1.00
1
O
41.28
5.932
10.149
21.983
B
O
HOH
26
HETATM
E
O
HOH
3
1.00
1
O
26.67
20.131
18.771
29.569
B
O
HOH
29
HETATM
E
O
HOH
3
1.00
1
O
10.38
2.203
16.964
16.131
B
O
HOH
30
HETATM
E
O
HOH
3
1.00
1
O
25.73
6.052
19.899
15.109
B
O
HOH
32
HETATM
E
O
HOH
3
1.00
1
O
22.59
4.217
18.064
14.723
B
O
HOH
33
HETATM
E
O
HOH
3
1.00
1
O
24.20
10.607
25.571
21.211
B
O
HOH
34
HETATM
E
O
HOH
3
1.00
1
O
21.80
11.787
19.487
34.831
B
O
HOH
35
HETATM
E
O
HOH
3
1.00
1
O
19.56
18.804
20.001
40.488
B
O
HOH
36
HETATM
E
O
HOH
3
1.00
1
O
24.28
4.819
20.761
11.559
B
O
HOH
37
HETATM
E
O
HOH
3
1.00
1
O
39.39
7.555
21.702
20.948
B
O
HOH
38
HETATM
E
O
HOH
3
1.00
1
O
16.76
9.380
22.802
32.502
B
O
HOH
39
HETATM
E
O
HOH
3
1.00
1
O
19.83
1.186
2.947
14.428
B
O
HOH
42
HETATM
E
O
HOH
3
1.00
1
O
30.70
0.431
12.806
14.955
B
O
HOH
43
HETATM
E
O
HOH
3
1.00
1
O
21.09
6.730
22.587
17.565
B
O
HOH
45
HETATM
E
O
HOH
3
1.00
1
O
46.26
9.374
23.188
18.850
B
O
HOH
47
HETATM
E
O
HOH
3
1.00
1
O
35.01
8.571
24.257
2.706
B
O
HOH
48
HETATM
E
O
HOH
3
1.00
1
O
12.46
0.260
30.321
18.523
B
O
HOH
49
HETATM
E
O
HOH
3
1.00
1
O
22.94
11.609
10.482
18.900
B
O
HOH
50
HETATM
E
O
HOH
3
1.00
1
O
18.09
1.106
1.704
19.617
B
O
HOH
51
HETATM
E
O
HOH
3
1.00
1
O
17.49
2.547
20.142
19.563
B
O
HOH
52
HETATM
E
O
HOH
3
1.00
1
O
21.71
7.381
8.354
21.660
B
O
HOH
53
HETATM
E
O
HOH
3
1.00
1
O
43.25
5.722
8.943
10.587
B
O
HOH
55
HETATM
E
O
HOH
3
1.00
1
O
25.57
4.666
10.027
8.181
B
O
HOH
56
HETATM
E
O
HOH
3
1.00
1
O
19.47
12.473
16.793
39.462
B
O
HOH
57
HETATM
E
O
HOH
3
1.00
1
O
38.24
5.293
22.057
5.857
B
O
HOH
58
HETATM
E
O
HOH
3
1.00
1
O
39.31
6.241
14.189
29.292
B
O
HOH
60
HETATM
E
O
HOH
3
1.00
1
O
47.21
4.550
15.871
28.470
B
O
HOH
61
HETATM
E
O
HOH
3
1.00
1
O
42.89
11.886
25.615
18.646
B
O
HOH
62
HETATM
E
O
HOH
3
1.00
1
O
54.87
6.215
12.379
25.892
B
O
HOH
64
HETATM
E
O
HOH
3
1.00
1
O
34.93
5.519
14.927
26.046
B
O
HOH
65
HETATM
E
O
HOH
3
1.00
1
O
54.01
2.814
23.091
8.680
B
O
HOH
67
HETATM
E
O
HOH
3
1.00
1
O
37.52
2.292
14.167
14.987
B
O
HOH
68
HETATM
E
O
HOH
3
1.00
1
O
26.45
3.453
31.038
9.430
B
O
HOH
69
HETATM
E
O
HOH
3
1.00
1
O
32.69
0.498
13.092
11.414
B
O
HOH
70
HETATM
E
O
HOH
3
1.00
1
O
46.66
8.321
24.328
18.056
B
O
HOH
71
HETATM
E
O
HOH
3
1.00
1
O
0.057604
0.000000
0.000000
0.000000
0.032103
0.000000
0.000000
0.000000
0.022026
0.00000
0.00000
0.00000
Coll, M.
Saal, D.
Frederick, C.A.
Aymami, J.
Rich, A.
Wang, A.H.-J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
17.360
31.150
45.400
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H12 F N2 O8 P
326.172
5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
DNA linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
N
13
N
N
N
14
N
C
N
15
N
O
N
16
N
N
N
17
N
C
N
18
N
N
N
19
N
C
N
20
N
C
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
O
N
36
N
P
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
C
N
41
R
C
N
42
N
O
N
43
S
C
N
44
N
O
N
45
N
C
N
46
R
C
Y
47
N
N
Y
48
N
C
Y
49
N
N
Y
50
N
C
N
51
N
C
N
52
N
O
N
53
N
N
N
54
N
C
N
55
N
N
N
56
N
N
Y
57
N
C
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
O
N
73
N
H
N
74
N
H
N
75
N
MG
N
76
N
N
N
77
N
C
N
78
N
N
N
79
N
C
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
O
N
84
N
F
N
85
R
C
N
86
N
C
N
87
S
C
N
88
R
C
N
89
N
O
N
90
N
O
N
91
N
C
N
92
N
O
N
93
N
P
N
94
N
O
N
95
N
O
N
96
N
O
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
doub
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
Y
59
N
sing
Y
60
N
sing
Y
61
N
doub
N
62
N
sing
Y
63
N
sing
N
64
N
sing
Y
65
N
doub
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
doub
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
17
911
923
10.1093/nar/17.3.911
2922276
Effects of 5-fluorouracil/guanine wobble base pairs in Z-DNA: molecular and crystal structure of d(CGCGFG).
1989
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
85
1735
1739
5-Fluorodeoxyuridine as an Alternative to the Synthesis of Mixed Hybridization Probes for the Detection of Specific Gene Sequences
1988
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
256
8885
8888
5-Fluoro-2'-Deoxyuridine Incorporation in L1210 DNA
1981
10.2210/pdb1dnf/pdb
pdb_00001dnf
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293.00
1
DIFFRACTOMETER
NICOLET P3
SINGLE WAVELENGTH
M
x-ray
1
1.0
1829.180
DNA (5'-D(*CP*GP*CP*GP*(UFP)P*G)-3')
2
syn
polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
18.015
water
58
nat
water
no
yes
(DC)(DG)(DC)(DG)(UFP)(DG)
CGCGNG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
1.68
26.69
VAPOR DIFFUSION
9.00
pH 9.00, VAPOR DIFFUSION
WATER
1
MPD
1
BIS-TRIS-PROPANE
1
MGCL2
1
SPERMINE
1
WATER
2
MPD
2
5.622
1
19
A
1
B
12
2.206
A_DC1:DG12_B
1
4.267
-0.320
0.062
-0.128
2.663
1
19
A
3
B
10
0.445
A_DC3:DG10_B
2
-0.518
-0.326
0.141
-0.132
-1.465
1
19
A
4
B
9
3.518
A_DG4:DC9_B
3
1.348
0.166
0.178
-0.172
-4.906
1
19
A
6
B
7
0.256
A_DG6:DC7_B
4
-5.202
0.165
0.299
-0.112
5.762
-10.178
A
A
3
4
28.031
B
B
10
9
3.740
-4.773
-0.059
5.283
AA_DC3DG4:DC9DG10_BB
1
-0.738
-4.333
-8.961
-16.453
-2.393
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_conn_type
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
1990-10-15
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn_type.id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
BNL
1988-12-12
REL
MG
MAGNESIUM ION
HOH
water
MG
13
2
MG
MG
13
A
HOH
15
3
HOH
HOH
15
A
HOH
16
3
HOH
HOH
16
A
HOH
19
3
HOH
HOH
19
A
HOH
21
3
HOH
HOH
21
A
HOH
23
3
HOH
HOH
23
A
HOH
24
3
HOH
HOH
24
A
HOH
27
3
HOH
HOH
27
A
HOH
28
3
HOH
HOH
28
A
HOH
31
3
HOH
HOH
31
A
HOH
40
3
HOH
HOH
40
A
HOH
41
3
HOH
HOH
41
A
HOH
44
3
HOH
HOH
44
A
HOH
46
3
HOH
HOH
46
A
HOH
54
3
HOH
HOH
54
A
HOH
59
3
HOH
HOH
59
A
HOH
63
3
HOH
HOH
63
A
HOH
66
3
HOH
HOH
66
A
HOH
14
3
HOH
HOH
14
B
HOH
17
3
HOH
HOH
17
B
HOH
18
3
HOH
HOH
18
B
HOH
20
3
HOH
HOH
20
B
HOH
22
3
HOH
HOH
22
B
HOH
25
3
HOH
HOH
25
B
HOH
26
3
HOH
HOH
26
B
HOH
29
3
HOH
HOH
29
B
HOH
30
3
HOH
HOH
30
B
HOH
32
3
HOH
HOH
32
B
HOH
33
3
HOH
HOH
33
B
HOH
34
3
HOH
HOH
34
B
HOH
35
3
HOH
HOH
35
B
HOH
36
3
HOH
HOH
36
B
HOH
37
3
HOH
HOH
37
B
HOH
38
3
HOH
HOH
38
B
HOH
39
3
HOH
HOH
39
B
HOH
42
3
HOH
HOH
42
B
HOH
43
3
HOH
HOH
43
B
HOH
45
3
HOH
HOH
45
B
HOH
47
3
HOH
HOH
47
B
HOH
48
3
HOH
HOH
48
B
HOH
49
3
HOH
HOH
49
B
HOH
50
3
HOH
HOH
50
B
HOH
51
3
HOH
HOH
51
B
HOH
52
3
HOH
HOH
52
B
HOH
53
3
HOH
HOH
53
B
HOH
55
3
HOH
HOH
55
B
HOH
56
3
HOH
HOH
56
B
HOH
57
3
HOH
HOH
57
B
HOH
58
3
HOH
HOH
58
B
HOH
60
3
HOH
HOH
60
B
HOH
61
3
HOH
HOH
61
B
HOH
62
3
HOH
HOH
62
B
HOH
64
3
HOH
HOH
64
B
HOH
65
3
HOH
HOH
65
B
HOH
67
3
HOH
HOH
67
B
HOH
68
3
HOH
HOH
68
B
HOH
69
3
HOH
HOH
69
B
HOH
70
3
HOH
HOH
70
B
HOH
71
3
HOH
HOH
71
B
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
C
3
n
3
DC
3
A
G
4
n
4
DG
4
A
+U
5
n
5
UFP
5
A
G
6
n
6
DG
6
A
C
7
n
1
DC
7
B
G
8
n
2
DG
8
B
C
9
n
3
DC
9
B
G
10
n
4
DG
10
B
+U
11
n
5
UFP
11
B
G
12
n
6
DG
12
B
author_defined_assembly
2
dimeric
A
HOH
15
D
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
16
D
O
HOH
1_555
89.2
A
HOH
15
D
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
19
D
O
HOH
4_456
98.1
A
HOH
16
D
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
A
HOH
19
D
O
HOH
4_456
91.7
A
HOH
15
D
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
B
HOH
14
E
O
HOH
4_456
176.0
A
HOH
16
D
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
B
HOH
14
E
O
HOH
4_456
89.5
A
HOH
19
D
O
HOH
4_456
A
MG
13
C
MG
MG
1_555
B
HOH
14
E
O
HOH
4_456
85.7
A
HOH
15
D
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
B
HOH
17
E
O
HOH
4_456
90.2
A
HOH
16
D
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
B
HOH
17
E
O
HOH
4_456
178.3
A
HOH
19
D
O
HOH
4_456
A
MG
13
C
MG
MG
1_555
B
HOH
17
E
O
HOH
4_456
89.9
B
HOH
14
E
O
HOH
4_456
A
MG
13
C
MG
MG
1_555
B
HOH
17
E
O
HOH
4_456
91.0
A
HOH
15
D
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
B
HOH
18
E
O
HOH
4_456
88.6
A
HOH
16
D
O
HOH
1_555
A
MG
13
C
MG
MG
1_555
B
HOH
18
E
O
HOH
4_456
88.6
A
HOH
19
D
O
HOH
4_456
A
MG
13
C
MG
MG
1_555
B
HOH
18
E
O
HOH
4_456
173.2
B
HOH
14
E
O
HOH
4_456
A
MG
13
C
MG
MG
1_555
B
HOH
18
E
O
HOH
4_456
87.6
B
HOH
17
E
O
HOH
4_456
A
MG
13
C
MG
MG
1_555
B
HOH
18
E
O
HOH
4_456
89.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
B
O
O
HOH
HOH
47
71
1.74
1
3.66
0.30
108.30
111.96
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
1
9.19
0.60
118.90
128.09
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
1
-7.80
0.70
121.90
114.10
A
A
A
N3
C2
O2
DC
DC
DC
1
1
1
N
1
-5.71
0.80
109.40
103.69
A
A
A
O5'
C5'
C4'
DG
DG
DG
2
2
2
N
1
-4.38
0.60
125.10
120.72
A
A
A
C6
N1
C2
DG
DG
DG
2
2
2
N
1
5.36
0.50
111.90
117.26
A
A
A
C2
N3
C4
DG
DG
DG
2
2
2
N
1
-3.92
0.50
128.60
124.68
A
A
A
N3
C4
C5
DG
DG
DG
2
2
2
N
1
4.39
0.50
111.50
115.89
A
A
A
C5
C6
N1
DG
DG
DG
2
2
2
N
1
-5.50
0.60
119.90
114.40
A
A
A
N1
C6
O6
DG
DG
DG
2
2
2
N
1
-12.70
0.80
109.40
96.70
A
A
A
O5'
C5'
C4'
DG
DG
DG
4
4
4
N
1
-2.42
0.40
106.40
103.98
A
A
A
C8
N9
C4
DG
DG
DG
4
4
4
N
1
6.74
0.90
116.20
122.94
A
A
A
N1
C2
N2
DG
DG
DG
4
4
4
N
1
-8.22
0.70
119.90
111.68
A
A
A
N3
C2
N2
DG
DG
DG
4
4
4
N
1
8.91
1.20
119.70
128.61
A
A
A
C3'
O3'
P
DG
DG
UFP
4
4
5
Y
1
-7.79
0.60
125.10
117.31
A
A
A
C6
N1
C2
DG
DG
DG
6
6
6
N
1
5.32
0.60
123.90
129.22
A
A
A
N1
C2
N3
DG
DG
DG
6
6
6
N
1
3.82
0.50
111.50
115.32
A
A
A
C5
C6
N1
DG
DG
DG
6
6
6
N
1
-5.05
0.60
119.90
114.85
A
A
A
N1
C6
O6
DG
DG
DG
6
6
6
N
1
5.29
0.40
120.30
125.59
B
B
B
C6
N1
C2
DC
DC
DC
7
7
7
N
1
-4.55
0.70
119.20
114.65
B
B
B
N1
C2
N3
DC
DC
DC
7
7
7
N
1
5.15
0.60
118.90
124.05
B
B
B
N1
C2
O2
DC
DC
DC
7
7
7
N
1
8.25
1.20
119.70
127.95
B
B
B
C3'
O3'
P
DC
DC
DG
7
7
8
Y
1
-4.67
0.60
123.90
119.23
B
B
B
N1
C2
N3
DG
DG
DG
8
8
8
N
1
6.95
0.50
111.90
118.85
B
B
B
C2
N3
C4
DG
DG
DG
8
8
8
N
1
-3.96
0.50
128.60
124.64
B
B
B
N3
C4
C5
DG
DG
DG
8
8
8
N
1
5.63
0.50
111.50
117.13
B
B
B
C5
C6
N1
DG
DG
DG
8
8
8
N
1
4.99
0.60
126.00
130.99
B
B
B
N3
C4
N9
DG
DG
DG
8
8
8
N
1
4.25
0.60
130.40
134.65
B
B
B
C6
C5
N7
DG
DG
DG
8
8
8
N
1
5.65
0.90
116.20
121.85
B
B
B
N1
C2
N2
DG
DG
DG
8
8
8
N
1
-6.04
0.60
119.90
113.86
B
B
B
N1
C6
O6
DG
DG
DG
8
8
8
N
1
13.24
1.20
119.70
132.94
B
B
B
C3'
O3'
P
DG
DG
DC
8
8
9
Y
1
17.78
1.90
104.00
121.78
B
B
B
O3'
P
O5'
DG
DC
DC
8
9
9
Y
1
10.48
1.10
110.50
120.98
B
B
B
O3'
P
OP1
DG
DC
DC
8
9
9
Y
1
-28.51
1.50
119.60
91.09
B
B
B
OP1
P
OP2
DC
DC
DC
9
9
9
N
1
-14.75
0.90
105.70
90.95
B
B
B
O5'
P
OP2
DC
DC
DC
9
9
9
N
1
-5.55
0.80
109.40
103.85
B
B
B
O5'
C5'
C4'
DC
DC
DC
9
9
9
N
1
-4.87
0.80
105.90
101.03
B
B
B
O4'
C1'
C2'
DC
DC
DC
9
9
9
N
1
3.28
0.30
108.30
111.58
B
B
B
O4'
C1'
N1
DC
DC
DC
9
9
9
N
1
-2.64
0.40
120.30
117.66
B
B
B
C6
N1
C2
DC
DC
DC
9
9
9
N
1
-3.08
0.40
121.90
118.82
B
B
B
N3
C4
C5
DC
DC
DC
9
9
9
N
1
-5.76
0.80
102.40
96.64
B
B
B
C3'
C2'
C1'
DG
DG
DG
12
12
12
N
1
2.23
0.30
108.30
110.53
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
1
3.54
0.50
111.90
115.44
B
B
B
C2
N3
C4
DG
DG
DG
12
12
12
N
1
4.10
0.50
111.50
115.60
B
B
B
C5
C6
N1
DG
DG
DG
12
12
12
N
1
3.09
0.40
110.80
113.89
B
B
B
C4
C5
N7
DG
DG
DG
12
12
12
N
1
3.96
0.60
126.00
129.96
B
B
B
N3
C4
N9
DG
DG
DG
12
12
12
N
1
-3.73
0.60
128.60
124.87
B
B
B
C5
C6
O6
DG
DG
DG
12
12
12
N
1
A
A
O4'
C4'
DG
DG
2
2
-0.060
0.010
1.446
1.386
N
1
A
A
O4'
C1'
DC
DC
3
3
0.077
0.011
1.420
1.497
N
1
A
A
O4'
C4'
DC
DC
3
3
-0.061
0.010
1.446
1.385
N
1
A
A
O3'
C3'
DC
DC
3
3
-0.037
0.006
1.419
1.382
N
1
A
A
N3
C4
DC
DC
3
3
0.052
0.007
1.335
1.387
N
1
A
A
C2'
C1'
DG
DG
4
4
-0.066
0.010
1.518
1.452
N
1
A
A
O4'
C1'
DG
DG
4
4
0.071
0.011
1.420
1.491
N
1
A
A
O4'
C4'
DG
DG
4
4
-0.083
0.010
1.446
1.363
N
1
A
A
N1
C2
DG
DG
4
4
-0.061
0.008
1.373
1.312
N
1
A
A
N7
C8
DG
DG
4
4
-0.054
0.006
1.305
1.251
N
1
A
A
O4'
C4'
DG
DG
6
6
-0.061
0.010
1.446
1.385
N
1
A
A
N7
C8
DG
DG
6
6
-0.045
0.006
1.305
1.260
N
1
B
B
C2
O2
DC
DC
7
7
-0.084
0.009
1.240
1.156
N
1
B
B
C5
C6
DC
DC
7
7
0.069
0.008
1.339
1.408
N
1
B
B
C3'
C2'
DG
DG
8
8
-0.059
0.008
1.516
1.457
N
1
B
B
N3
C4
DG
DG
8
8
-0.064
0.007
1.350
1.286
N
1
B
B
C4
C5
DG
DG
8
8
0.047
0.007
1.379
1.426
N
1
B
B
C6
N1
DG
DG
8
8
-0.044
0.007
1.391
1.347
N
1
B
B
C6
O6
DG
DG
8
8
0.063
0.009
1.237
1.300
N
1
B
B
O3'
P
DG
DC
8
9
-0.149
0.012
1.607
1.458
Y
1
B
B
P
OP2
DC
DC
9
9
0.296
0.017
1.485
1.781
N
1
B
B
N1
C6
DC
DC
9
9
0.044
0.006
1.367
1.411
N
1
B
B
O4'
C4'
DG
DG
10
10
-0.082
0.010
1.446
1.364
N
1
B
B
N1
C2
DG
DG
10
10
-0.053
0.008
1.373
1.320
N
1
B
B
O3'
C3'
DG
DG
12
12
0.091
0.013
1.435
1.526
N
1
B
B
C6
N1
DG
DG
12
12
-0.043
0.007
1.391
1.348
N
1
B
A
OP2
O
DC
HOH
9
54
2.01
1_555
2_665
1
A
B
O
O
HOH
HOH
31
42
2.14
1_555
4_556
0.172
1.500
2770
1
2.000
TR
isotropic
TR
isotropic
1.500
58
301
3
240
0
0.028
0.037
fix
fix
1.500
1DNF
2770
2.000
1
refinement
NUCLSQ
EFFECTS OF 5-FLUOROURACIL/GUANINE WOBBLE BASE PAIRS IN Z-DNA. MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGFG)
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
covale
1.626
both
A
DG
4
A
O3'
DG
4
1_555
A
UFP
5
A
P
UFP
5
1_555
covale
1.577
one
A
UFP
5
A
O3'
UFP
5
1_555
A
DG
6
A
P
DG
6
1_555
covale
1.593
both
B
DG
10
B
O3'
DG
4
1_555
B
UFP
11
B
P
UFP
5
1_555
covale
1.542
one
B
UFP
11
B
O3'
UFP
5
1_555
B
DG
12
B
P
DG
6
1_555
metalc
1.942
A
MG
13
C
MG
MG
1_555
A
HOH
15
D
O
HOH
1_555
metalc
2.038
A
MG
13
C
MG
MG
1_555
A
HOH
16
D
O
HOH
1_555
metalc
1.921
A
MG
13
C
MG
MG
1_555
A
HOH
19
D
O
HOH
4_456
metalc
2.070
A
MG
13
C
MG
MG
1_555
B
HOH
14
E
O
HOH
4_456
metalc
1.959
A
MG
13
C
MG
MG
1_555
B
HOH
17
E
O
HOH
4_456
metalc
2.035
A
MG
13
C
MG
MG
1_555
B
HOH
18
E
O
HOH
4_456
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
12
B
N1
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
12
B
O6
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
12
B
N2
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
10
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
10
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
10
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
B
DC
9
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
B
DC
9
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
B
DC
9
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N1
DG
6
1_555
B
DC
7
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N2
DG
6
1_555
B
DC
7
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
6
A
O6
DG
6
1_555
B
DC
7
B
N4
DC
1
1_555
DNA
Z-DNA, DOUBLE HELIX, MODIFIED, MISMATCHED, DNA
1DNF
PDB
1
1DNF
1
6
1DNF
1
6
1DNF
A
1
1
6
7
12
1DNF
7
12
1DNF
B
1
1
6
BINDING SITE FOR RESIDUE MG A 13
A
MG
13
Software
6
A
HOH
15
D
HOH
6
1_555
A
HOH
16
D
HOH
6
1_555
A
HOH
19
D
HOH
6
4_456
B
HOH
14
E
HOH
6
4_456
B
HOH
17
E
HOH
6
4_456
B
HOH
18
E
HOH
6
4_456
19
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