0.038185 0.000000 0.000000 0.000000 0.023841 0.000000 0.000000 0.000000 0.023082 0.00000 0.00000 0.00000 Robinson, H. Gao, Y.-G. Sanishvili, R. Joachimiak, A. Wang, A.H.-J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 26.188 41.944 43.323 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking H2 O 18.015 WATER non-polymer Mg 2 24.305 MAGNESIUM ION non-polymer N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C N 49 N N N 50 N C N 51 N O N 52 N N N 53 N C N 54 N N N 55 N C N 56 N C N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N O N 72 N P N 73 N O N 74 N O N 75 N O N 76 N C N 77 R C N 78 N O N 79 S C N 80 N O N 81 N C N 82 R C Y 83 N N Y 84 N C Y 85 N N Y 86 N C N 87 N C N 88 N O N 89 N N N 90 N C N 91 N N N 92 N N Y 93 N C N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N O N 109 N P N 110 N O N 111 N O N 112 N O N 113 N C N 114 R C N 115 N O N 116 S C N 117 N O N 118 N C N 119 R C N 120 N N N 121 N C N 122 N O N 123 N N N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N P N 146 N O N 147 N O N 148 N O N 149 N C N 150 R C N 151 N O N 152 S C N 153 N O N 154 R C N 155 N O N 156 R C Y 157 N N Y 158 N C Y 159 N N Y 160 N C N 161 N C N 162 N O N 163 N N N 164 N C N 165 N N N 166 N N Y 167 N C N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N O N 183 N H N 184 N H N 185 N MG N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing Y 174 N sing Y 175 N sing Y 176 N doub N 177 N sing Y 178 N sing N 179 N sing Y 180 N doub N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing UK Nucleic Acids Res. NARHAD 0389 0305-1048 28 1760 1766 10.1093/nar/28.8.1760 10734195 Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes. 2000 10.2210/pdb1dnx/pdb pdb_00001dnx 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 123 1 IMAGE PLATE 1999-04-22 RIGAKU RAXIS IIC SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 3061.005 DNA/RNA (5'-R(*GP)-D(*CP*GP*TP*AP*TP*AP*CP*GP*C)-3') 2 syn polymer 24.305 MAGNESIUM ION 1 syn non-polymer 18.015 water 84 nat water no no G(DC)(DG)(DT)(DA)(DT)(DA)(DC)(DG)(DC) GCGTATACGC A,B polydeoxyribonucleotide/polyribonucleotide hybrid n n n n n n n n n n 1 1.75 30. VAPOR DIFFUSION, SITTING DROP 6.5 MPD, CACODYLATE, MGCL2, SPERMINE, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K 298 CACODYLATE 1 SPERMINE 1 MGCL2 1 MPD 1 MPD 2 -0.263 1 19 A 1 B 20 -0.151 A_G1:DC20_B 1 -5.229 -0.341 0.053 -0.164 -3.504 1 19 A 2 B 19 -1.431 A_DC2:DG19_B 2 -9.527 0.055 0.429 -0.142 -13.008 1 19 A 3 B 18 1.384 A_DG3:DC18_B 3 -11.739 -0.443 0.058 -0.061 -10.146 1 20 A 4 B 17 1.034 A_DT4:DA17_B 4 -15.752 0.042 0.155 -0.097 -3.533 1 20 A 5 B 16 4.023 A_DA5:DT16_B 5 -8.591 -0.036 0.325 -0.131 4.820 1 20 A 6 B 15 1.825 A_DT6:DA15_B 6 -11.591 -0.063 0.181 -0.112 -2.544 1 20 A 7 B 14 0.819 A_DA7:DT14_B 7 -21.893 0.116 0.063 -0.158 -0.405 1 19 A 8 B 13 0.883 A_DC8:DG13_B 8 -10.328 0.213 -0.044 -0.195 -2.121 1 19 A 9 B 12 1.258 A_DG9:DC12_B 9 -9.099 -0.159 0.171 -0.068 6.606 1 19 A 10 B 11 -4.278 A_DC10:G11_B 10 5.101 0.111 0.027 -0.067 3.256 39.267 A A 1 2 0.909 B B 20 19 3.277 0.611 0.417 -1.583 AA_G1DC2:DG19DC20_BB 1 0.248 -0.370 39.261 -2.428 -0.592 2.684 26.914 A A 2 3 15.246 B B 19 18 3.356 6.956 0.503 -2.303 AA_DC2DG3:DC18DG19_BB 2 6.127 -13.430 25.295 -6.647 0.416 3.124 37.424 A A 3 4 9.443 B B 18 17 3.266 6.025 -1.009 -1.181 AA_DG3DT4:DA17DC18_BB 3 -3.683 5.773 36.775 -2.621 1.096 1.709 33.641 A A 4 5 38.558 B B 17 16 3.012 20.777 1.476 -1.212 AA_DT4DA5:DT16DA17_BB 4 1.193 -2.214 26.578 -4.852 -2.393 2.862 32.232 A A 5 6 13.027 B B 16 15 3.208 7.173 -0.255 -1.190 AA_DA5DT6:DA15DT16_BB 5 1.282 -2.327 31.419 -3.344 0.674 2.310 36.208 A A 6 7 25.835 B B 15 14 3.148 15.540 0.527 -1.401 AA_DT6DA7:DT14DA15_BB 6 3.478 -5.782 32.624 -4.179 -0.418 2.859 34.071 A A 7 8 10.993 B B 14 13 3.112 6.377 1.111 -1.868 AA_DA7DC8:DG13DT14_BB 7 5.685 -9.802 33.013 -4.129 -1.056 2.685 25.493 A A 8 9 15.411 B B 13 12 3.285 6.720 -0.425 -1.940 AA_DC8DG9:DC12DG13_BB 8 -1.277 2.928 24.573 -6.184 0.623 3.171 36.699 A A 9 10 0.422 B B 12 11 3.173 0.266 -0.240 -1.192 AA_DG9DC10:G11DC12_BB 9 -1.073 1.705 36.683 -1.929 0.239 software chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Version format compliance Refinement description Data collection Database references Derived calculations 1 0 2000-04-10 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 1 4 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 1999-12-16 REL REL MG MAGNESIUM ION HOH water MO6 24 2 MG MG 24 A HOH 104 3 HOH HOH 104 A HOH 105 3 HOH HOH 105 A HOH 106 3 HOH HOH 106 A HOH 107 3 HOH HOH 107 A HOH 108 3 HOH HOH 108 A HOH 109 3 HOH HOH 109 A HOH 111 3 HOH HOH 111 A HOH 112 3 HOH HOH 112 A HOH 113 3 HOH HOH 113 A HOH 114 3 HOH HOH 114 A HOH 117 3 HOH HOH 117 A HOH 121 3 HOH HOH 121 A HOH 122 3 HOH HOH 122 A HOH 123 3 HOH HOH 123 A HOH 124 3 HOH HOH 124 A HOH 126 3 HOH HOH 126 A HOH 128 3 HOH HOH 128 A HOH 129 3 HOH HOH 129 A HOH 131 3 HOH HOH 131 A HOH 134 3 HOH HOH 134 A HOH 135 3 HOH HOH 135 A HOH 138 3 HOH HOH 138 A HOH 140 3 HOH HOH 140 A HOH 142 3 HOH HOH 142 A HOH 144 3 HOH HOH 144 A HOH 145 3 HOH HOH 145 A HOH 146 3 HOH HOH 146 A HOH 147 3 HOH HOH 147 A HOH 151 3 HOH HOH 151 A HOH 152 3 HOH HOH 152 A HOH 153 3 HOH HOH 153 A HOH 158 3 HOH HOH 158 A HOH 160 3 HOH HOH 160 A HOH 161 3 HOH HOH 161 A HOH 163 3 HOH HOH 163 A HOH 164 3 HOH HOH 164 A HOH 165 3 HOH HOH 165 A HOH 173 3 HOH HOH 173 A HOH 175 3 HOH HOH 175 A HOH 176 3 HOH HOH 176 A HOH 177 3 HOH HOH 177 A HOH 178 3 HOH HOH 178 A MO6 24 3 HOH HOH 179 A MO6 24 3 HOH HOH 180 A MO6 24 3 HOH HOH 181 A MO6 24 3 HOH HOH 182 A MO6 24 3 HOH HOH 184 A HOH 101 3 HOH HOH 101 B HOH 102 3 HOH HOH 102 B HOH 103 3 HOH HOH 103 B HOH 110 3 HOH HOH 110 B HOH 115 3 HOH HOH 115 B HOH 116 3 HOH HOH 116 B HOH 118 3 HOH HOH 118 B HOH 119 3 HOH HOH 119 B HOH 120 3 HOH HOH 120 B HOH 125 3 HOH HOH 125 B HOH 127 3 HOH HOH 127 B HOH 130 3 HOH HOH 130 B HOH 132 3 HOH HOH 132 B HOH 133 3 HOH HOH 133 B HOH 136 3 HOH HOH 136 B HOH 137 3 HOH HOH 137 B HOH 139 3 HOH HOH 139 B HOH 141 3 HOH HOH 141 B HOH 143 3 HOH HOH 143 B HOH 148 3 HOH HOH 148 B HOH 149 3 HOH HOH 149 B HOH 150 3 HOH HOH 150 B HOH 154 3 HOH HOH 154 B HOH 155 3 HOH HOH 155 B HOH 156 3 HOH HOH 156 B HOH 157 3 HOH HOH 157 B HOH 159 3 HOH HOH 159 B HOH 162 3 HOH HOH 162 B HOH 166 3 HOH HOH 166 B HOH 167 3 HOH HOH 167 B HOH 168 3 HOH HOH 168 B HOH 169 3 HOH HOH 169 B HOH 170 3 HOH HOH 170 B HOH 171 3 HOH HOH 171 B HOH 172 3 HOH HOH 172 B HOH 174 3 HOH HOH 174 B MO6 24 3 HOH HOH 183 B G 1 n 1 G 1 A C 2 n 2 DC 2 A G 3 n 3 DG 3 A T 4 n 4 DT 4 A A 5 n 5 DA 5 A T 6 n 6 DT 6 A A 7 n 7 DA 7 A C 8 n 8 DC 8 A G 9 n 9 DG 9 A C 10 n 10 DC 10 A G 11 n 1 G 11 B C 12 n 2 DC 12 B G 13 n 3 DG 13 B T 14 n 4 DT 14 B A 15 n 5 DA 15 B T 16 n 6 DT 16 B A 17 n 7 DA 17 B C 18 n 8 DC 18 B G 19 n 9 DG 19 B C 20 n 10 DC 20 B 0.194 0.193 0.24 285 5 5598 author_defined_assembly 2 dimeric A HOH 179 D O HOH 1_555 A MG 24 C MG MG 1_555 A HOH 180 D O HOH 1_555 179.5 A HOH 179 D O HOH 1_555 A MG 24 C MG MG 1_555 A HOH 181 D O HOH 1_555 90.0 A HOH 180 D O HOH 1_555 A MG 24 C MG MG 1_555 A HOH 181 D O HOH 1_555 89.9 A HOH 179 D O HOH 1_555 A MG 24 C MG MG 1_555 A HOH 182 D O HOH 1_555 88.9 A HOH 180 D O HOH 1_555 A MG 24 C MG MG 1_555 A HOH 182 D O HOH 1_555 90.7 A HOH 181 D O HOH 1_555 A MG 24 C MG MG 1_555 A HOH 182 D O HOH 1_555 88.0 A HOH 179 D O HOH 1_555 A MG 24 C MG MG 1_555 A HOH 184 D O HOH 1_555 91.1 A HOH 180 D O HOH 1_555 A MG 24 C MG MG 1_555 A HOH 184 D O HOH 1_555 89.3 A HOH 181 D O HOH 1_555 A MG 24 C MG MG 1_555 A HOH 184 D O HOH 1_555 90.5 A HOH 182 D O HOH 1_555 A MG 24 C MG MG 1_555 A HOH 184 D O HOH 1_555 178.6 A HOH 179 D O HOH 1_555 A MG 24 C MG MG 1_555 B HOH 183 E O HOH 1_555 89.7 A HOH 180 D O HOH 1_555 A MG 24 C MG MG 1_555 B HOH 183 E O HOH 1_555 90.4 A HOH 181 D O HOH 1_555 A MG 24 C MG MG 1_555 B HOH 183 E O HOH 1_555 177.7 A HOH 182 D O HOH 1_555 A MG 24 C MG MG 1_555 B HOH 183 E O HOH 1_555 89.7 A HOH 184 D O HOH 1_555 A MG 24 C MG MG 1_555 B HOH 183 E O HOH 1_555 91.7 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A DC 2 0.060 SIDE CHAIN 1 A DT 4 0.073 SIDE CHAIN 1 A DT 6 0.068 SIDE CHAIN 1 A DC 8 0.067 SIDE CHAIN 1 A DG 9 0.064 SIDE CHAIN 1 A DC 10 0.074 SIDE CHAIN 1 B G 11 0.088 SIDE CHAIN 1 B DG 19 0.099 SIDE CHAIN 1 -4.95 0.70 102.20 97.25 A A A C4' C3' C2' DT DT DT 6 6 6 N 1 -3.75 0.60 118.90 115.15 A A A N1 C2 O2 DC DC DC 8 8 8 N 1 -3.10 0.40 104.50 101.40 A A A O4' C4' C3' DG DG DG 9 9 9 N 1 3.17 0.30 108.30 111.47 A A A O4' C1' N9 DG DG DG 9 9 9 N 1 -5.48 0.40 104.50 99.02 B B B O4' C4' C3' DC DC DC 12 12 12 N 1 -2.78 0.40 104.50 101.72 B B B O4' C4' C3' DT DT DT 14 14 14 N 1 -3.89 0.40 104.50 100.61 B B B O4' C4' C3' DC DC DC 18 18 18 N 1 -6.38 0.60 119.90 113.52 B B B N1 C6 O6 DG DG DG 19 19 19 N 1 5.54 0.60 128.60 134.14 B B B C5 C6 O6 DG DG DG 19 19 19 N 1 -2.93 0.40 104.50 101.57 B B B O4' C4' C3' DC DC DC 20 20 20 N 0.243 0.195 0.195 0.194 1.70 20.0 1979 290 5659 5598 1758 5 96.3 RANDOM 1 A POSTERIORI 0 0 G.PARKINSON ET AL. SHELXL SWAT OPTION 0 0 491 1.70 20.0 78 491 7 406 0 0.008 0.024 0.074 0.003 0.052 1.7 20 1DNX 5659 5659 0.0 0.0 0.079 1 47.3 10.1 96.3 0.228 1.70 1.76 17.7 7.1 94.0 data reduction d*TREK V.4.7 model building X-PLOR refinement SHELXL-97 data scaling d*TREK V. 4.7 phasing X-PLOR RNA/DNA DODECAMER R(G)D(CGTATACGC) WITH MAGNESIUM BINDING SITES 1 N N 1 N N 2 N N 3 N N 3 N N metalc 2.062 A MG 24 C MG MG 1_555 A HOH 179 D O HOH 1_555 metalc 2.052 A MG 24 C MG MG 1_555 A HOH 180 D O HOH 1_555 metalc 2.066 A MG 24 C MG MG 1_555 A HOH 181 D O HOH 1_555 metalc 2.072 A MG 24 C MG MG 1_555 A HOH 182 D O HOH 1_555 metalc 2.052 A MG 24 C MG MG 1_555 A HOH 184 D O HOH 1_555 metalc 2.065 A MG 24 C MG MG 1_555 B HOH 183 E O HOH 1_555 hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 B DC 20 B N3 DC 10 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 B DC 20 B O2 DC 10 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 B DC 20 B N4 DC 10 1_555 hydrog WATSON-CRICK A DC 2 A N3 DC 2 1_555 B DG 19 B N1 DG 9 1_555 hydrog WATSON-CRICK A DC 2 A N4 DC 2 1_555 B DG 19 B O6 DG 9 1_555 hydrog WATSON-CRICK A DC 2 A O2 DC 2 1_555 B DG 19 B N2 DG 9 1_555 hydrog WATSON-CRICK A DG 3 A N1 DG 3 1_555 B DC 18 B N3 DC 8 1_555 hydrog WATSON-CRICK A DG 3 A N2 DG 3 1_555 B DC 18 B O2 DC 8 1_555 hydrog WATSON-CRICK A DG 3 A O6 DG 3 1_555 B DC 18 B N4 DC 8 1_555 hydrog WATSON-CRICK A DT 4 A N3 DT 4 1_555 B DA 17 B N1 DA 7 1_555 hydrog WATSON-CRICK A DT 4 A O4 DT 4 1_555 B DA 17 B N6 DA 7 1_555 hydrog WATSON-CRICK A DA 5 A N1 DA 5 1_555 B DT 16 B N3 DT 6 1_555 hydrog WATSON-CRICK A DA 5 A N6 DA 5 1_555 B DT 16 B O4 DT 6 1_555 hydrog WATSON-CRICK A DT 6 A N3 DT 6 1_555 B DA 15 B N1 DA 5 1_555 hydrog WATSON-CRICK A DT 6 A O4 DT 6 1_555 B DA 15 B N6 DA 5 1_555 hydrog WATSON-CRICK A DA 7 A N1 DA 7 1_555 B DT 14 B N3 DT 4 1_555 hydrog WATSON-CRICK A DA 7 A N6 DA 7 1_555 B DT 14 B O4 DT 4 1_555 hydrog WATSON-CRICK A DC 8 A N3 DC 8 1_555 B DG 13 B N1 DG 3 1_555 hydrog WATSON-CRICK A DC 8 A N4 DC 8 1_555 B DG 13 B O6 DG 3 1_555 hydrog WATSON-CRICK A DC 8 A O2 DC 8 1_555 B DG 13 B N2 DG 3 1_555 hydrog WATSON-CRICK A DG 9 A N1 DG 9 1_555 B DC 12 B N3 DC 2 1_555 hydrog WATSON-CRICK A DG 9 A N2 DG 9 1_555 B DC 12 B O2 DC 2 1_555 hydrog WATSON-CRICK A DG 9 A O6 DG 9 1_555 B DC 12 B N4 DC 2 1_555 hydrog WATSON-CRICK A DC 10 A N3 DC 10 1_555 B G 11 B N1 G 1 1_555 hydrog WATSON-CRICK A DC 10 A N4 DC 10 1_555 B G 11 B O6 G 1 1_555 hydrog WATSON-CRICK A DC 10 A O2 DC 10 1_555 B G 11 B N2 G 1 1_555 DNA-RNA HYBRID DNA CONFORMATION, RNA/DNA HYBRID, METAL IONS, DNA-RNA COMPLEX, DNA-RNA HYBRID 1DNX PDB 1 1DNX 1 10 1DNX 1 10 1DNX A 1 1 10 11 20 1DNX 11 20 1DNX B 1 1 10 BINDING SITE FOR RESIDUE MG A 24 A MG 24 Software 6 A HOH 179 D HOH 6 1_555 A HOH 180 D HOH 6 1_555 A HOH 181 D HOH 6 1_555 A HOH 182 D HOH 6 1_555 A HOH 184 D HOH 6 1_555 B HOH 183 E HOH 6 1_555 19 orthorhombic P 21 21 21