35.01
-9.742
21.098
15.940
A
O5'
DA
1
ATOM
A
O5'
DA
1
1
1.00
1
O
36.66
-9.688
19.702
16.275
A
C5'
DA
1
ATOM
A
C5'
DA
1
1
1.00
1
C
23.72
-9.004
18.883
15.208
A
C4'
DA
1
ATOM
A
C4'
DA
1
1
1.00
1
C
22.84
-9.539
19.169
13.897
A
O4'
DA
1
ATOM
A
O4'
DA
1
1
1.00
1
O
21.34
-7.510
19.158
15.075
A
C3'
DA
1
ATOM
A
C3'
DA
1
1
1.00
1
C
28.12
-6.746
18.479
16.058
A
O3'
DA
1
ATOM
A
O3'
DA
1
1
1.00
1
O
16.55
-7.244
18.638
13.656
A
C2'
DA
1
ATOM
A
C2'
DA
1
1
1.00
1
C
23.49
-8.485
19.163
12.934
A
C1'
DA
1
ATOM
A
C1'
DA
1
1
1.00
1
C
27.22
-8.315
20.590
12.606
A
N9
DA
1
ATOM
A
N9
DA
1
1
1.00
1
N
26.21
-8.936
21.648
13.229
A
C8
DA
1
ATOM
A
C8
DA
1
1
1.00
1
C
30.30
-8.657
22.785
12.643
A
N7
DA
1
ATOM
A
N7
DA
1
1
1.00
1
N
24.24
-8.007
22.418
11.479
A
C5
DA
1
ATOM
A
C5
DA
1
1
1.00
1
C
25.06
-7.350
23.176
10.493
A
C6
DA
1
ATOM
A
C6
DA
1
1
1.00
1
C
46.52
-7.432
24.509
10.444
A
N6
DA
1
ATOM
A
N6
DA
1
1
1.00
1
N
24.89
-6.623
22.513
9.579
A
N1
DA
1
ATOM
A
N1
DA
1
1
1.00
1
N
29.06
-6.498
21.183
9.650
A
C2
DA
1
ATOM
A
C2
DA
1
1
1.00
1
C
24.69
-7.007
20.372
10.575
A
N3
DA
1
ATOM
A
N3
DA
1
1
1.00
1
N
20.49
-7.689
21.068
11.497
A
C4
DA
1
ATOM
A
C4
DA
1
1
1.00
1
C
25.25
-5.518
19.166
16.829
A
P
DC
2
ATOM
A
P
DC
1
2
1.00
1
P
26.96
-4.893
18.154
17.712
A
OP1
DC
2
ATOM
A
OP1
DC
1
2
1.00
1
O
30.08
-5.888
20.501
17.332
A
OP2
DC
2
ATOM
A
OP2
DC
1
2
1.00
1
O
25.29
-4.423
19.425
15.681
A
O5'
DC
2
ATOM
A
O5'
DC
1
2
1.00
1
O
21.62
-3.801
18.301
15.052
A
C5'
DC
2
ATOM
A
C5'
DC
1
2
1.00
1
C
21.66
-3.105
18.676
13.777
A
C4'
DC
2
ATOM
A
C4'
DC
1
2
1.00
1
C
21.02
-4.011
19.253
12.817
A
O4'
DC
2
ATOM
A
O4'
DC
1
2
1.00
1
O
19.42
-2.030
19.759
13.980
A
C3'
DC
2
ATOM
A
C3'
DC
1
2
1.00
1
C
23.67
-0.787
19.126
14.290
A
O3'
DC
2
ATOM
A
O3'
DC
1
2
1.00
1
O
16.65
-1.963
20.374
12.600
A
C2'
DC
2
ATOM
A
C2'
DC
1
2
1.00
1
C
20.90
-3.407
20.345
12.152
A
C1'
DC
2
ATOM
A
C1'
DC
1
2
1.00
1
C
22.86
-4.112
21.575
12.546
A
N1
DC
2
ATOM
A
N1
DC
1
2
1.00
1
N
16.52
-3.965
22.642
11.661
A
C2
DC
2
ATOM
A
C2
DC
1
2
1.00
1
C
20.48
-3.235
22.459
10.683
A
O2
DC
2
ATOM
A
O2
DC
1
2
1.00
1
O
19.45
-4.624
23.782
11.907
A
N3
DC
2
ATOM
A
N3
DC
1
2
1.00
1
N
23.92
-5.362
23.891
13.019
A
C4
DC
2
ATOM
A
C4
DC
1
2
1.00
1
C
21.61
-6.019
25.049
13.186
A
N4
DC
2
ATOM
A
N4
DC
1
2
1.00
1
N
19.65
-5.551
22.819
13.936
A
C5
DC
2
ATOM
A
C5
DC
1
2
1.00
1
C
23.88
-4.860
21.690
13.681
A
C6
DC
2
ATOM
A
C6
DC
1
2
1.00
1
C
28.66
0.365
19.894
15.110
A
P
DC
3
ATOM
A
P
DC
1
3
1.00
1
P
30.88
1.464
18.943
15.335
A
OP1
DC
3
ATOM
A
OP1
DC
1
3
1.00
1
O
25.63
-0.195
20.749
16.168
A
OP2
DC
3
ATOM
A
OP2
DC
1
3
1.00
1
O
22.60
0.926
20.920
14.012
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O5'
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3
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A
O5'
DC
1
3
1.00
1
O
22.94
1.802
20.497
12.972
A
C5'
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3
ATOM
A
C5'
DC
1
3
1.00
1
C
20.21
1.953
21.622
11.994
A
C4'
DC
3
ATOM
A
C4'
DC
1
3
1.00
1
C
26.10
0.702
22.112
11.449
A
O4'
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3
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A
O4'
DC
1
3
1.00
1
O
27.34
2.523
22.889
12.686
A
C3'
DC
3
ATOM
A
C3'
DC
1
3
1.00
1
C
40.87
3.907
22.689
12.970
A
O3'
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3
ATOM
A
O3'
DC
1
3
1.00
1
O
16.69
2.295
23.861
11.542
A
C2'
DC
3
ATOM
A
C2'
DC
1
3
1.00
1
C
22.87
0.828
23.525
11.216
A
C1'
DC
3
ATOM
A
C1'
DC
1
3
1.00
1
C
19.03
-0.148
24.215
12.091
A
N1
DC
3
ATOM
A
N1
DC
1
3
1.00
1
N
21.25
-0.583
25.490
11.746
A
C2
DC
3
ATOM
A
C2
DC
1
3
1.00
1
C
21.35
-0.070
26.043
10.773
A
O2
DC
3
ATOM
A
O2
DC
1
3
1.00
1
O
13.69
-1.554
26.097
12.462
A
N3
DC
3
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A
N3
DC
1
3
1.00
1
N
18.03
-2.156
25.468
13.481
A
C4
DC
3
ATOM
A
C4
DC
1
3
1.00
1
C
19.86
-3.037
26.164
14.228
A
N4
DC
3
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A
N4
DC
1
3
1.00
1
N
21.35
-1.639
24.214
13.934
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C5
DC
3
ATOM
A
C5
DC
1
3
1.00
1
C
15.80
-0.742
23.594
13.145
A
C6
DC
3
ATOM
A
C6
DC
1
3
1.00
1
C
31.61
4.590
23.353
14.269
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P
DG
4
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A
P
DG
1
4
1.00
1
P
38.68
5.935
22.733
14.388
A
OP1
DG
4
ATOM
A
OP1
DG
1
4
1.00
1
O
26.56
3.645
23.396
15.418
A
OP2
DG
4
ATOM
A
OP2
DG
1
4
1.00
1
O
26.12
4.844
24.871
13.839
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O5'
DG
4
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A
O5'
DG
1
4
1.00
1
O
28.32
5.405
25.220
12.568
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C5'
DG
4
ATOM
A
C5'
DG
1
4
1.00
1
C
26.25
5.181
26.668
12.250
A
C4'
DG
4
ATOM
A
C4'
DG
1
4
1.00
1
C
23.63
3.835
26.893
11.744
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4
ATOM
A
O4'
DG
1
4
1.00
1
O
25.89
5.311
27.650
13.423
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C3'
DG
4
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A
C3'
DG
1
4
1.00
1
C
42.68
6.693
28.003
13.550
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4
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A
O3'
DG
1
4
1.00
1
O
25.21
4.636
28.861
12.756
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4
ATOM
A
C2'
DG
1
4
1.00
1
C
26.91
3.392
28.175
12.187
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C1'
DG
4
ATOM
A
C1'
DG
1
4
1.00
1
C
20.81
2.341
28.048
13.194
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N9
DG
4
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A
N9
DG
1
4
1.00
1
N
25.90
1.937
26.991
13.968
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C8
DG
4
ATOM
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C8
DG
1
4
1.00
1
C
23.31
0.838
27.225
14.653
A
N7
DG
4
ATOM
A
N7
DG
1
4
1.00
1
N
14.42
0.518
28.538
14.323
A
C5
DG
4
ATOM
A
C5
DG
1
4
1.00
1
C
21.97
-0.553
29.382
14.727
A
C6
DG
4
ATOM
A
C6
DG
1
4
1.00
1
C
17.97
-1.572
29.038
15.341
A
O6
DG
4
ATOM
A
O6
DG
1
4
1.00
1
O
18.82
-0.468
30.663
14.173
A
N1
DG
4
ATOM
A
N1
DG
1
4
1.00
1
N
18.30
0.535
31.110
13.351
A
C2
DG
4
ATOM
A
C2
DG
1
4
1.00
1
C
18.65
0.487
32.385
12.919
A
N2
DG
4
ATOM
A
N2
DG
1
4
1.00
1
N
19.29
1.535
30.320
12.949
A
N3
DG
4
ATOM
A
N3
DG
1
4
1.00
1
N
18.11
1.424
29.057
13.426
A
C4
DG
4
ATOM
A
C4
DG
1
4
1.00
1
C
34.07
7.355
28.609
14.859
A
P
DG
5
ATOM
A
P
DG
1
5
1.00
1
P
35.81
8.834
28.550
14.643
A
OP1
DG
5
ATOM
A
OP1
DG
1
5
1.00
1
O
28.81
6.756
28.045
16.088
A
OP2
DG
5
ATOM
A
OP2
DG
1
5
1.00
1
O
33.87
7.009
30.168
14.874
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O5'
DG
5
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A
O5'
DG
1
5
1.00
1
O
21.58
7.382
30.984
13.759
A
C5'
DG
5
ATOM
A
C5'
DG
1
5
1.00
1
C
24.28
6.677
32.313
13.857
A
C4'
DG
5
ATOM
A
C4'
DG
1
5
1.00
1
C
26.08
5.292
32.197
13.452
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O4'
DG
5
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A
O4'
DG
1
5
1.00
1
O
23.19
6.620
32.938
15.264
A
C3'
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5
ATOM
A
C3'
DG
1
5
1.00
1
C
23.02
7.796
33.736
15.468
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5
ATOM
A
O3'
DG
1
5
1.00
1
O
21.17
5.456
33.903
15.066
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5
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C2'
DG
1
5
1.00
1
C
22.76
4.485
33.032
14.279
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5
ATOM
A
C1'
DG
1
5
1.00
1
C
18.38
3.639
32.208
15.106
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N9
DG
5
ATOM
A
N9
DG
1
5
1.00
1
N
16.38
3.794
30.871
15.397
A
C8
DG
5
ATOM
A
C8
DG
1
5
1.00
1
C
19.99
2.884
30.399
16.191
A
N7
DG
5
ATOM
A
N7
DG
1
5
1.00
1
N
19.53
2.002
31.454
16.352
A
C5
DG
5
ATOM
A
C5
DG
1
5
1.00
1
C
20.14
0.822
31.515
17.127
A
C6
DG
5
ATOM
A
C6
DG
1
5
1.00
1
C
22.20
0.288
30.616
17.792
A
O6
DG
5
ATOM
A
O6
DG
1
5
1.00
1
O
20.68
0.371
32.835
17.191
A
N1
DG
5
ATOM
A
N1
DG
1
5
1.00
1
N
22.29
0.928
33.913
16.561
A
C2
DG
5
ATOM
A
C2
DG
1
5
1.00
1
C
25.50
0.303
35.095
16.703
A
N2
DG
5
ATOM
A
N2
DG
1
5
1.00
1
N
22.05
2.009
33.850
15.792
A
N3
DG
5
ATOM
A
N3
DG
1
5
1.00
1
N
19.98
2.500
32.591
15.780
A
C4
DG
5
ATOM
A
C4
DG
1
5
1.00
1
C
26.16
8.460
33.869
16.891
A
P
DC
6
ATOM
A
P
DC
1
6
1.00
1
P
31.76
9.779
34.550
16.731
A
OP1
DC
6
ATOM
A
OP1
DC
1
6
1.00
1
O
25.86
8.407
32.587
17.676
A
OP2
DC
6
ATOM
A
OP2
DC
1
6
1.00
1
O
26.31
7.548
34.845
17.755
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O5'
DC
6
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A
O5'
DC
1
6
1.00
1
O
24.10
7.246
36.178
17.331
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C5'
DC
6
ATOM
A
C5'
DC
1
6
1.00
1
C
18.22
6.019
36.715
17.998
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C4'
DC
6
ATOM
A
C4'
DC
1
6
1.00
1
C
18.83
4.825
36.031
17.547
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O4'
DC
6
ATOM
A
O4'
DC
1
6
1.00
1
O
24.90
5.982
36.537
19.522
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C3'
DC
6
ATOM
A
C3'
DC
1
6
1.00
1
C
28.15
6.726
37.530
20.219
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O3'
DC
6
ATOM
A
O3'
DC
1
6
1.00
1
O
19.33
4.504
36.784
19.779
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C2'
DC
6
ATOM
A
C2'
DC
1
6
1.00
1
C
20.10
3.879
36.026
18.614
A
C1'
DC
6
ATOM
A
C1'
DC
1
6
1.00
1
C
21.36
3.604
34.619
18.972
A
N1
DC
6
ATOM
A
N1
DC
1
6
1.00
1
N
21.82
2.413
34.391
19.667
A
C2
DC
6
ATOM
A
C2
DC
1
6
1.00
1
C
26.36
1.660
35.325
19.979
A
O2
DC
6
ATOM
A
O2
DC
1
6
1.00
1
O
20.82
2.130
33.124
20.068
A
N3
DC
6
ATOM
A
N3
DC
1
6
1.00
1
N
21.27
2.969
32.135
19.703
A
C4
DC
6
ATOM
A
C4
DC
1
6
1.00
1
C
21.98
2.471
30.904
19.951
A
N4
DC
6
ATOM
A
N4
DC
1
6
1.00
1
N
20.31
4.167
32.338
18.960
A
C5
DC
6
ATOM
A
C5
DC
1
6
1.00
1
C
20.15
4.474
33.622
18.645
A
C6
DC
6
ATOM
A
C6
DC
1
6
1.00
1
C
24.68
7.367
37.198
21.671
A
P
DC
7
ATOM
A
P
DC
1
7
1.00
1
P
34.06
8.268
38.333
21.962
A
OP1
DC
7
ATOM
A
OP1
DC
1
7
1.00
1
O
25.78
7.855
35.791
21.681
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OP2
DC
7
ATOM
A
OP2
DC
1
7
1.00
1
O
24.10
6.092
37.281
22.614
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O5'
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7
ATOM
A
O5'
DC
1
7
1.00
1
O
21.75
5.204
38.408
22.646
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C5'
DC
7
ATOM
A
C5'
DC
1
7
1.00
1
C
22.83
4.010
38.118
23.526
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C4'
DC
7
ATOM
A
C4'
DC
1
7
1.00
1
C
19.11
3.182
37.097
22.878
A
O4'
DC
7
ATOM
A
O4'
DC
1
7
1.00
1
O
30.30
4.378
37.500
24.883
A
C3'
DC
7
ATOM
A
C3'
DC
1
7
1.00
1
C
24.51
4.680
38.535
25.833
A
O3'
DC
7
ATOM
A
O3'
DC
1
7
1.00
1
O
18.36
3.083
36.793
25.221
A
C2'
DC
7
ATOM
A
C2'
DC
1
7
1.00
1
C
19.81
2.620
36.258
23.875
A
C1'
DC
7
ATOM
A
C1'
DC
1
7
1.00
1
C
22.09
3.002
34.857
23.586
A
N1
DC
7
ATOM
A
N1
DC
1
7
1.00
1
N
24.95
2.177
33.854
24.108
A
C2
DC
7
ATOM
A
C2
DC
1
7
1.00
1
C
19.83
1.189
34.174
24.812
A
O2
DC
7
ATOM
A
O2
DC
1
7
1.00
1
O
23.37
2.438
32.566
23.780
A
N3
DC
7
ATOM
A
N3
DC
1
7
1.00
1
N
18.38
3.545
32.271
23.093
A
C4
DC
7
ATOM
A
C4
DC
1
7
1.00
1
C
18.07
3.811
30.989
22.837
A
N4
DC
7
ATOM
A
N4
DC
1
7
1.00
1
N
18.10
4.402
33.275
22.545
A
C5
DC
7
ATOM
A
C5
DC
1
7
1.00
1
C
18.21
4.084
34.550
22.814
A
C6
DC
7
ATOM
A
C6
DC
1
7
1.00
1
C
24.98
5.484
38.202
27.193
A
P
DG
8
ATOM
A
P
DG
1
8
1.00
1
P
28.09
5.626
39.462
27.957
A
OP1
DG
8
ATOM
A
OP1
DG
1
8
1.00
1
O
25.78
6.683
37.399
26.898
A
OP2
DG
8
ATOM
A
OP2
DG
1
8
1.00
1
O
21.24
4.381
37.368
27.982
A
O5'
DG
8
ATOM
A
O5'
DG
1
8
1.00
1
O
23.93
4.647
36.389
28.991
A
C5'
DG
8
ATOM
A
C5'
DG
1
8
1.00
1
C
22.82
3.413
35.550
29.217
A
C4'
DG
8
ATOM
A
C4'
DG
1
8
1.00
1
C
20.99
2.886
34.956
28.004
A
O4'
DG
8
ATOM
A
O4'
DG
1
8
1.00
1
O
23.32
3.579
34.344
30.149
A
C3'
DG
8
ATOM
A
C3'
DG
1
8
1.00
1
C
27.45
3.573
34.841
31.500
A
O3'
DG
8
ATOM
A
O3'
DG
1
8
1.00
1
O
25.51
2.242
33.652
29.875
A
C2'
DG
8
ATOM
A
C2'
DG
1
8
1.00
1
C
18.73
2.223
33.735
28.351
A
C1'
DG
8
ATOM
A
C1'
DG
1
8
1.00
1
C
18.08
3.001
32.691
27.670
A
N9
DG
8
ATOM
A
N9
DG
1
8
1.00
1
N
16.60
4.140
32.818
26.932
A
C8
DG
8
ATOM
A
C8
DG
1
8
1.00
1
C
21.14
4.438
31.736
26.254
A
N7
DG
8
ATOM
A
N7
DG
1
8
1.00
1
N
19.84
3.508
30.797
26.668
A
C5
DG
8
ATOM
A
C5
DG
1
8
1.00
1
C
19.55
3.340
29.434
26.338
A
C6
DG
8
ATOM
A
C6
DG
1
8
1.00
1
C
16.47
4.014
28.671
25.623
A
O6
DG
8
ATOM
A
O6
DG
1
8
1.00
1
O
21.72
2.259
28.889
27.021
A
N1
DG
8
ATOM
A
N1
DG
1
8
1.00
1
N
19.60
1.430
29.559
27.879
A
C2
DG
8
ATOM
A
C2
DG
1
8
1.00
1
C
27.85
0.433
28.834
28.413
A
N2
DG
8
ATOM
A
N2
DG
1
8
1.00
1
N
16.67
1.546
30.841
28.157
A
N3
DG
8
ATOM
A
N3
DG
1
8
1.00
1
N
19.21
2.616
31.379
27.545
A
C4
DG
8
ATOM
A
C4
DG
1
8
1.00
1
C
31.56
4.533
34.062
32.542
A
P
DG
9
ATOM
A
P
DG
1
9
1.00
1
P
29.68
4.468
34.880
33.769
A
OP1
DG
9
ATOM
A
OP1
DG
1
9
1.00
1
O
28.72
5.832
33.787
31.914
A
OP2
DG
9
ATOM
A
OP2
DG
1
9
1.00
1
O
29.61
3.794
32.690
32.787
A
O5'
DG
9
ATOM
A
O5'
DG
1
9
1.00
1
O
26.49
2.530
32.543
33.434
A
C5'
DG
9
ATOM
A
C5'
DG
1
9
1.00
1
C
27.87
2.048
31.118
33.309
A
C4'
DG
9
ATOM
A
C4'
DG
1
9
1.00
1
C
23.97
1.981
30.761
31.905
A
O4'
DG
9
ATOM
A
O4'
DG
1
9
1.00
1
O
29.22
3.014
30.047
33.856
A
C3'
DG
9
ATOM
A
C3'
DG
1
9
1.00
1
C
42.31
2.763
29.900
35.267
A
O3'
DG
9
ATOM
A
O3'
DG
1
9
1.00
1
O
23.00
2.386
28.816
33.215
A
C2'
DG
9
ATOM
A
C2'
DG
1
9
1.00
1
C
26.62
2.078
29.336
31.817
A
C1'
DG
9
ATOM
A
C1'
DG
1
9
1.00
1
C
26.25
3.206
29.063
30.927
A
N9
DG
9
ATOM
A
N9
DG
1
9
1.00
1
N
24.12
4.212
29.904
30.553
A
C8
DG
9
ATOM
A
C8
DG
1
9
1.00
1
C
20.59
4.990
29.394
29.647
A
N7
DG
9
ATOM
A
N7
DG
1
9
1.00
1
N
19.37
4.464
28.135
29.418
A
C5
DG
9
ATOM
A
C5
DG
1
9
1.00
1
C
15.88
4.940
27.089
28.585
A
C6
DG
9
ATOM
A
C6
DG
1
9
1.00
1
C
19.90
5.851
27.138
27.774
A
O6
DG
9
ATOM
A
O6
DG
1
9
1.00
1
O
23.86
4.190
25.935
28.747
A
N1
DG
9
ATOM
A
N1
DG
1
9
1.00
1
N
24.05
3.141
25.801
29.613
A
C2
DG
9
ATOM
A
C2
DG
1
9
1.00
1
C
27.05
2.530
24.600
29.620
A
N2
DG
9
ATOM
A
N2
DG
1
9
1.00
1
N
25.12
2.728
26.738
30.460
A
N3
DG
9
ATOM
A
N3
DG
1
9
1.00
1
N
30.69
3.393
27.889
30.239
A
C4
DG
9
ATOM
A
C4
DG
1
9
1.00
1
C
41.73
3.835
29.021
36.101
A
P
DT
10
ATOM
A
P
DT
1
10
1.00
1
P
30.81
3.372
29.027
37.520
A
OP1
DT
10
ATOM
A
OP1
DT
1
10
1.00
1
O
45.47
5.173
29.500
35.696
A
OP2
DT
10
ATOM
A
OP2
DT
1
10
1.00
1
O
33.83
3.678
27.552
35.509
A
O5'
DT
10
ATOM
A
O5'
DT
1
10
1.00
1
O
43.12
2.618
26.693
35.966
A
C5'
DT
10
ATOM
A
C5'
DT
1
10
1.00
1
C
45.29
2.851
25.277
35.506
A
C4'
DT
10
ATOM
A
C4'
DT
1
10
1.00
1
C
37.55
2.898
25.207
34.055
A
O4'
DT
10
ATOM
A
O4'
DT
1
10
1.00
1
O
38.14
4.210
24.688
35.931
A
C3'
DT
10
ATOM
A
C3'
DT
1
10
1.00
1
C
37.18
4.159
24.220
37.285
A
O3'
DT
10
ATOM
A
O3'
DT
1
10
1.00
1
O
30.29
4.272
23.494
34.990
A
C2'
DT
10
ATOM
A
C2'
DT
1
10
1.00
1
C
36.83
3.747
24.114
33.691
A
C1'
DT
10
ATOM
A
C1'
DT
1
10
1.00
1
C
35.09
4.859
24.627
32.869
A
N1
DT
10
ATOM
A
N1
DT
1
10
1.00
1
N
38.69
5.232
23.893
31.774
A
C2
DT
10
ATOM
A
C2
DT
1
10
1.00
1
C
35.67
4.824
22.766
31.540
A
O2
DT
10
ATOM
A
O2
DT
1
10
1.00
1
O
32.66
6.128
24.531
30.960
A
N3
DT
10
ATOM
A
N3
DT
1
10
1.00
1
N
31.44
6.653
25.803
31.094
A
C4
DT
10
ATOM
A
C4
DT
1
10
1.00
1
C
33.65
7.428
26.190
30.219
A
O4
DT
10
ATOM
A
O4
DT
1
10
1.00
1
O
29.92
6.211
26.513
32.266
A
C5
DT
10
ATOM
A
C5
DT
1
10
1.00
1
C
28.35
6.695
27.889
32.600
A
C7
DT
10
ATOM
A
C7
DT
1
10
1.00
1
C
30.05
5.366
25.886
33.087
A
C6
DT
10
ATOM
A
C6
DT
1
10
1.00
1
C
36.07
7.881
29.452
24.687
A
MG
MG
21
HETATM
B
MG
MG
2
1.00
1
MG
17.81
-0.296
26.814
18.499
A
MG
MG
22
HETATM
C
MG
MG
2
0.50
1
MG
13.08
-0.716
25.428
16.587
A
O
HOH
101
HETATM
D
O
HOH
3
0.50
1
O
18.61
2.494
27.582
21.161
A
O
HOH
102
HETATM
D
O
HOH
3
0.50
1
O
28.95
-3.802
24.879
16.856
A
O
HOH
103
HETATM
D
O
HOH
3
1.00
1
O
23.68
3.946
27.874
17.164
A
O
HOH
104
HETATM
D
O
HOH
3
1.00
1
O
32.87
-2.745
21.069
8.673
A
O
HOH
105
HETATM
D
O
HOH
3
1.00
1
O
28.61
4.183
28.641
19.857
A
O
HOH
106
HETATM
D
O
HOH
3
1.00
1
O
27.21
6.527
30.750
21.543
A
O
HOH
107
HETATM
D
O
HOH
3
1.00
1
O
23.24
-0.664
32.010
29.648
A
O
HOH
108
HETATM
D
O
HOH
3
1.00
1
O
34.77
2.936
31.330
10.986
A
O
HOH
109
HETATM
D
O
HOH
3
1.00
1
O
29.67
6.634
34.761
26.150
A
O
HOH
110
HETATM
D
O
HOH
3
1.00
1
O
27.45
1.820
25.888
8.863
A
O
HOH
111
HETATM
D
O
HOH
3
1.00
1
O
32.99
7.614
33.160
20.856
A
O
HOH
112
HETATM
D
O
HOH
3
1.00
1
O
39.27
8.056
33.845
23.832
A
O
HOH
113
HETATM
D
O
HOH
3
1.00
1
O
39.68
1.076
37.881
19.813
A
O
HOH
114
HETATM
D
O
HOH
3
1.00
1
O
35.34
6.746
30.089
17.989
A
O
HOH
115
HETATM
D
O
HOH
3
1.00
1
O
30.43
0.917
23.095
16.521
A
O
HOH
116
HETATM
D
O
HOH
3
1.00
1
O
36.25
7.220
30.641
28.745
A
O
HOH
117
HETATM
D
O
HOH
3
1.00
1
O
31.34
3.488
25.547
17.431
A
O
HOH
118
HETATM
D
O
HOH
3
1.00
1
O
44.89
3.966
19.664
17.518
A
O
HOH
119
HETATM
D
O
HOH
3
1.00
1
O
35.37
5.886
26.013
38.500
A
O
HOH
120
HETATM
D
O
HOH
3
1.00
1
O
43.79
7.575
33.772
28.409
A
O
HOH
121
HETATM
D
O
HOH
3
1.00
1
O
39.92
1.621
28.693
8.208
A
O
HOH
122
HETATM
D
O
HOH
3
1.00
1
O
34.49
8.175
40.679
23.552
A
O
HOH
123
HETATM
D
O
HOH
3
1.00
1
O
45.02
-7.276
17.690
19.697
A
O
HOH
124
HETATM
D
O
HOH
3
1.00
1
O
31.60
6.198
28.454
24.029
A
O
HOH
125
HETATM
D
O
HOH
3
1.00
1
O
39.76
9.535
30.482
25.386
A
O
HOH
126
HETATM
D
O
HOH
3
1.00
1
O
26.25
6.806
31.216
24.815
A
O
HOH
127
HETATM
D
O
HOH
3
1.00
1
O
35.82
8.342
29.977
22.748
A
O
HOH
128
HETATM
D
O
HOH
3
1.00
1
O
43.97
9.016
27.746
24.496
A
O
HOH
129
HETATM
D
O
HOH
3
1.00
1
O
33.25
7.383
28.937
26.608
A
O
HOH
130
HETATM
D
O
HOH
3
1.00
1
O
34.56
-1.877
27.657
17.492
A
O
HOH
131
HETATM
D
O
HOH
3
0.50
1
O
23.53
1.279
25.942
19.498
A
O
HOH
132
HETATM
D
O
HOH
3
0.50
1
O
15.69
-0.884
27.762
20.233
A
O
HOH
133
HETATM
D
O
HOH
3
0.50
1
O
21.36
0.897
28.409
18.006
A
O
HOH
134
HETATM
D
O
HOH
3
0.50
1
O
12.92
0.274
25.838
16.777
A
O
HOH
135
HETATM
D
O
HOH
3
0.50
1
O
16.12
-1.487
25.203
19.009
A
O
HOH
136
HETATM
D
O
HOH
3
0.50
1
O
0.025973
0.014995
0.000000
0.000000
0.029991
0.000000
0.000000
0.000000
0.012881
0.00000
0.00000
0.00000
Robinson, H.
Gao, Y.-G.
Sanishvili, R.
Joachimiak, A.
Wang, A.H.-J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
38.502
38.502
77.631
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
Mg 2
24.305
MAGNESIUM ION
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
MG
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
28
1760
1766
10.1093/nar/28.8.1760
10734195
Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.
2000
10.2210/pdb1dnz/pdb
pdb_00001dnz
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
123
1
IMAGE PLATE
1999-05-05
RIGAKU RAXIS IIC
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
3045.992
DNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')
1
syn
polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
18.015
water
36
nat
water
no
no
(DA)(DC)(DC)(DG)(DG)(DC)(DC)(DG)(DG)(DT)
ACCGGCCGGT
A
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
1
2.44
50.0
VAPOR DIFFUSION, SITTING DROP
6.5
MPD, CACODYLATE, MGCL2, SPERMINE, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
CACODYLATE
1
SPERMINE
1
MGCL2
1
MPD
1
MPD
2
-5.470
1
20
A
1
A
10
-7.138
A_DA1:DT10_A
1
-14.267
-0.732
-0.026
-0.613
7.488
1
19
A
2
A
9
2.159
A_DC2:DG9_A
2
-12.995
0.211
0.145
-0.141
7.265
1
19
A
3
A
8
0.221
A_DC3:DG8_A
3
-12.771
0.143
-0.038
-0.083
11.275
1
19
A
4
A
7
2.010
A_DG4:DC7_A
4
-9.851
-0.214
0.380
-0.118
2.426
1
19
A
5
A
6
0.338
A_DG5:DC6_A
5
-19.532
-0.340
0.154
-0.096
-2.426
1
19
A
6
A
5
0.338
A_DC6:DG5_A
6
-19.532
0.340
0.154
-0.096
-11.275
1
19
A
7
A
4
2.010
A_DC7:DG4_A
7
-9.851
0.214
0.380
-0.118
-7.265
1
19
A
8
A
3
0.221
A_DG8:DC3_A
8
-12.771
-0.143
-0.038
-0.083
-7.488
1
19
A
9
A
2
2.159
A_DG9:DC2_A
9
-12.995
-0.211
0.145
-0.141
5.470
1
20
A
10
A
1
-7.138
A_DT10:DA1_A
10
-14.267
0.732
-0.026
-0.613
2.551
38.092
A
A
1
2
12.188
A
A
10
9
2.902
7.898
0.874
-1.211
AA_DA1DC2:DG9DT10_AA
1
-2.057
3.174
37.239
-2.700
-1.559
3.012
34.815
A
A
2
3
9.380
A
A
9
8
3.268
5.589
-0.200
-1.406
AA_DC2DC3:DG8DG9_AA
2
-0.478
0.802
34.374
-3.172
0.265
2.149
27.761
A
A
3
4
24.260
A
A
8
7
3.097
11.244
-0.278
-1.719
AA_DC3DG4:DC7DG8_AA
3
-5.181
11.179
24.896
-5.879
-0.479
2.939
35.755
A
A
4
5
13.201
A
A
7
6
3.289
8.034
-0.568
-1.379
AA_DG4DG5:DC6DC7_AA
4
-2.333
3.834
34.794
-3.365
0.600
3.140
36.189
A
A
5
6
7.711
A
A
6
5
3.328
4.777
0.000
-1.262
AA_DG5DC6:DG5DC6_AA
5
0.000
0.000
35.883
-2.699
0.000
2.939
35.755
A
A
6
7
13.201
A
A
5
4
3.289
8.034
0.568
-1.379
AA_DC6DC7:DG4DG5_AA
6
2.333
-3.834
34.794
-3.365
-0.600
2.149
27.761
A
A
7
8
24.260
A
A
4
3
3.097
11.244
0.278
-1.719
AA_DC7DG8:DC3DG4_AA
7
5.181
-11.179
24.896
-5.879
0.479
3.012
34.815
A
A
8
9
9.380
A
A
3
2
3.268
5.589
0.200
-1.406
AA_DG8DG9:DC2DC3_AA
8
0.478
-0.802
34.374
-3.172
-0.265
2.551
38.092
A
A
9
10
12.188
A
A
2
1
2.902
7.898
-0.874
-1.211
AA_DG9DT10:DA1DC2_AA
9
2.057
-3.174
37.239
-2.700
1.559
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
1
0
2000-04-10
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
1999-12-17
REL
REL
MG
MAGNESIUM ION
HOH
water
MO6
21
2
MG
MG
21
A
MO6
22
2
MG
MG
22
A
HOH
101
3
HOH
HOH
101
A
HOH
102
3
HOH
HOH
102
A
HOH
103
3
HOH
HOH
103
A
HOH
104
3
HOH
HOH
104
A
HOH
105
3
HOH
HOH
105
A
HOH
106
3
HOH
HOH
106
A
HOH
107
3
HOH
HOH
107
A
HOH
108
3
HOH
HOH
108
A
HOH
109
3
HOH
HOH
109
A
HOH
110
3
HOH
HOH
110
A
HOH
111
3
HOH
HOH
111
A
HOH
112
3
HOH
HOH
112
A
HOH
113
3
HOH
HOH
113
A
HOH
114
3
HOH
HOH
114
A
HOH
115
3
HOH
HOH
115
A
HOH
116
3
HOH
HOH
116
A
HOH
117
3
HOH
HOH
117
A
HOH
118
3
HOH
HOH
118
A
HOH
119
3
HOH
HOH
119
A
HOH
120
3
HOH
HOH
120
A
HOH
121
3
HOH
HOH
121
A
HOH
122
3
HOH
HOH
122
A
HOH
123
3
HOH
HOH
123
A
HOH
124
3
HOH
HOH
124
A
MO6
21
3
HOH
HOH
125
A
MO6
21
3
HOH
HOH
126
A
MO6
21
3
HOH
HOH
127
A
MO6
21
3
HOH
HOH
128
A
MO6
21
3
HOH
HOH
129
A
MO6
21
3
HOH
HOH
130
A
MO6
22
3
HOH
HOH
131
A
MO6
22
3
HOH
HOH
132
A
MO6
22
3
HOH
HOH
133
A
MO6
22
3
HOH
HOH
134
A
MO6
22
3
HOH
HOH
135
A
MO6
22
3
HOH
HOH
136
A
A
1
n
1
DA
1
A
C
2
n
2
DC
2
A
C
3
n
3
DC
3
A
G
4
n
4
DG
4
A
G
5
n
5
DG
5
A
C
6
n
6
DC
6
A
C
7
n
7
DC
7
A
G
8
n
8
DG
8
A
G
9
n
9
DG
9
A
T
10
n
10
DT
10
A
0.2290000
0.2270000
0.2780000
242
5
4656
author_defined_assembly
2
dimeric
A
HOH
125
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
126
D
O
HOH
1_555
178.4
A
HOH
125
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
127
D
O
HOH
1_555
90.5
A
HOH
126
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
127
D
O
HOH
1_555
88.3
A
HOH
125
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
128
D
O
HOH
1_555
90.3
A
HOH
126
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
128
D
O
HOH
1_555
90.7
A
HOH
127
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
128
D
O
HOH
1_555
87.6
A
HOH
125
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
129
D
O
HOH
1_555
91.1
A
HOH
126
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
129
D
O
HOH
1_555
90.2
A
HOH
127
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
129
D
O
HOH
1_555
177.1
A
HOH
128
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
129
D
O
HOH
1_555
90.0
A
HOH
125
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
130
D
O
HOH
1_555
88.8
A
HOH
126
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
130
D
O
HOH
1_555
90.2
A
HOH
127
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
130
D
O
HOH
1_555
91.7
A
HOH
128
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
130
D
O
HOH
1_555
178.9
A
HOH
129
D
O
HOH
1_555
A
MG
21
B
MG
MG
1_555
A
HOH
130
D
O
HOH
1_555
90.7
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
102
D
O
HOH
11_555
75.6
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
131
D
O
HOH
1_555
73.2
A
HOH
102
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
131
D
O
HOH
1_555
12.3
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
132
D
O
HOH
1_555
106.0
A
HOH
102
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
132
D
O
HOH
1_555
167.3
A
HOH
131
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
132
D
O
HOH
1_555
179.2
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
132
D
O
HOH
11_555
89.1
A
HOH
102
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
132
D
O
HOH
11_555
78.0
A
HOH
131
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
132
D
O
HOH
11_555
90.1
A
HOH
132
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
132
D
O
HOH
11_555
89.5
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
1_555
152.4
A
HOH
102
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
1_555
83.7
A
HOH
131
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
1_555
90.2
A
HOH
132
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
1_555
90.3
A
HOH
132
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
1_555
68.5
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
11_555
122.8
A
HOH
102
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
11_555
121.0
A
HOH
131
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
11_555
111.7
A
HOH
132
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
11_555
69.1
A
HOH
132
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
11_555
144.8
A
HOH
133
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
11_555
83.6
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
1_555
111.1
A
HOH
102
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
1_555
101.1
A
HOH
131
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
1_555
90.6
A
HOH
132
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
1_555
90.1
A
HOH
132
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
1_555
159.1
A
HOH
133
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
1_555
90.6
A
HOH
133
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
1_555
22.3
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
11_555
157.8
A
HOH
102
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
11_555
85.2
A
HOH
131
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
11_555
90.3
A
HOH
132
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
11_555
90.3
A
HOH
132
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
11_555
75.8
A
HOH
133
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
11_555
7.3
A
HOH
133
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
11_555
76.8
A
HOH
134
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
11_555
83.3
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
135
D
O
HOH
1_555
26.9
A
HOH
102
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
135
D
O
HOH
1_555
96.2
A
HOH
131
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
135
D
O
HOH
1_555
89.9
A
HOH
132
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
135
D
O
HOH
1_555
89.6
A
HOH
132
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
135
D
O
HOH
1_555
110.5
A
HOH
133
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
135
D
O
HOH
1_555
179.0
A
HOH
133
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
135
D
O
HOH
1_555
97.3
A
HOH
134
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
135
D
O
HOH
1_555
90.4
A
HOH
134
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
135
D
O
HOH
1_555
173.7
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
69.2
A
HOH
102
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
79.3
A
HOH
131
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
89.8
A
HOH
132
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
89.5
A
HOH
132
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
20.7
A
HOH
133
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
89.2
A
HOH
133
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
157.2
A
HOH
134
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
179.5
A
HOH
134
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
96.5
A
HOH
135
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
89.8
A
HOH
101
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
98.9
A
HOH
102
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
157.5
A
HOH
131
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
167.7
A
HOH
132
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
11.5
A
HOH
132
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
80.2
A
HOH
133
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
93.1
A
HOH
133
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
80.5
A
HOH
134
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
101.2
A
HOH
134
D
O
HOH
11_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
94.5
A
HOH
135
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
86.6
A
HOH
136
D
O
HOH
1_555
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
78.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
11_555
-x+y,y,-z+1/2
crystal symmetry operation
0.0000000000
0.0000000000
38.8155000000
1
A
DG
4
0.080
SIDE CHAIN
1
A
DG
8
0.051
SIDE CHAIN
1
A
DG
9
0.060
SIDE CHAIN
1
A
DT
10
0.059
SIDE CHAIN
1
-4.63
0.70
108.00
103.37
A
A
A
O4'
C1'
N9
DA
DA
DA
1
1
1
N
1
-2.46
0.40
104.50
102.04
A
A
A
O4'
C4'
C3'
DC
DC
DC
3
3
3
N
1
-4.64
0.70
102.20
97.56
A
A
A
C4'
C3'
C2'
DC
DC
DC
3
3
3
N
1
-2.56
0.40
121.90
119.34
A
A
A
N3
C4
C5
DC
DC
DC
3
3
3
N
1
-4.44
0.70
102.20
97.76
A
A
A
C4'
C3'
C2'
DG
DG
DG
4
4
4
N
1
2.75
0.30
108.30
111.05
A
A
A
O4'
C1'
N9
DG
DG
DG
4
4
4
N
1
2.65
0.40
120.30
122.95
A
A
A
C6
N1
C2
DC
DC
DC
6
6
6
N
1
-5.07
0.70
118.00
112.93
A
A
A
N3
C4
N4
DC
DC
DC
6
6
6
N
1
-2.89
0.40
104.50
101.61
A
A
A
O4'
C4'
C3'
DG
DG
DG
9
9
9
N
0.2790000
0.2270000
0.2290000
0.2270000
1.6
20.0
963
245
4874
4874
907
5
99.6
RANDOM
1
A POSTERIORI
0.0
0.0
MOLECULAR REPLACEMENT
G.PARKINSON ET AL.
SHELXL SWAT OPTION
0
0
235.5
1.6
20.0
24
240
14
202
0
0.009
0.025
0.071
0.003
0.060
29.2
1.6
20.0
1DNZ
4901
4901
0.0
0.0
0.0420000
1
47.8
15.2
99.6
0.4890000
1.60
1.65
9.2
8.4
96.8
model building
X-PLOR
refinement
SHELXL-97
data scaling
d*TREK
phasing
X-PLOR
A-DNA DECAMER ACCGGCCGGT WITH MAGNESIUM BINDING SITES
1
N
N
2
N
N
2
N
N
3
N
N
metalc
2.064
A
MG
21
B
MG
MG
1_555
A
HOH
125
D
O
HOH
1_555
metalc
2.070
A
MG
21
B
MG
MG
1_555
A
HOH
126
D
O
HOH
1_555
metalc
2.070
A
MG
21
B
MG
MG
1_555
A
HOH
127
D
O
HOH
1_555
metalc
2.061
A
MG
21
B
MG
MG
1_555
A
HOH
128
D
O
HOH
1_555
metalc
2.058
A
MG
21
B
MG
MG
1_555
A
HOH
129
D
O
HOH
1_555
metalc
2.050
A
MG
21
B
MG
MG
1_555
A
HOH
130
D
O
HOH
1_555
metalc
2.399
A
MG
22
C
MG
MG
1_555
A
HOH
101
D
O
HOH
1_555
metalc
2.477
A
MG
22
C
MG
MG
1_555
A
HOH
102
D
O
HOH
11_555
metalc
2.055
A
MG
22
C
MG
MG
1_555
A
HOH
131
D
O
HOH
1_555
metalc
2.059
A
MG
22
C
MG
MG
1_555
A
HOH
132
D
O
HOH
1_555
metalc
1.548
A
MG
22
C
MG
MG
1_555
A
HOH
132
D
O
HOH
11_555
metalc
2.062
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
1_555
metalc
1.516
A
MG
22
C
MG
MG
1_555
A
HOH
133
D
O
HOH
11_555
metalc
2.052
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
1_555
metalc
2.871
A
MG
22
C
MG
MG
1_555
A
HOH
134
D
O
HOH
11_555
metalc
2.060
A
MG
22
C
MG
MG
1_555
A
HOH
135
D
O
HOH
1_555
metalc
2.067
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
1_555
metalc
2.736
A
MG
22
C
MG
MG
1_555
A
HOH
136
D
O
HOH
11_555
hydrog
WATSON-CRICK
A
DA
1
A
N1
DA
1
1_555
A
DT
10
A
N3
DT
10
11_555
hydrog
WATSON-CRICK
A
DA
1
A
N6
DA
1
1_555
A
DT
10
A
O4
DT
10
11_555
hydrog
WATSON-CRICK
A
DC
2
A
N3
DC
2
1_555
A
DG
9
A
N1
DG
9
11_555
hydrog
WATSON-CRICK
A
DC
2
A
N4
DC
2
1_555
A
DG
9
A
O6
DG
9
11_555
hydrog
WATSON-CRICK
A
DC
2
A
O2
DC
2
1_555
A
DG
9
A
N2
DG
9
11_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
A
DG
8
A
N1
DG
8
11_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
A
DG
8
A
O6
DG
8
11_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
A
DG
8
A
N2
DG
8
11_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
A
DC
7
A
N3
DC
7
11_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
A
DC
7
A
O2
DC
7
11_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
A
DC
7
A
N4
DC
7
11_555
hydrog
WATSON-CRICK
A
DG
5
A
N1
DG
5
1_555
A
DC
6
A
N3
DC
6
11_555
hydrog
WATSON-CRICK
A
DG
5
A
N2
DG
5
1_555
A
DC
6
A
O2
DC
6
11_555
hydrog
WATSON-CRICK
A
DG
5
A
O6
DG
5
1_555
A
DC
6
A
N4
DC
6
11_555
hydrog
WATSON-CRICK
A
DC
6
A
N3
DC
6
1_555
A
DG
5
A
N1
DG
5
11_555
hydrog
WATSON-CRICK
A
DC
6
A
N4
DC
6
1_555
A
DG
5
A
O6
DG
5
11_555
hydrog
WATSON-CRICK
A
DC
6
A
O2
DC
6
1_555
A
DG
5
A
N2
DG
5
11_555
hydrog
WATSON-CRICK
A
DC
7
A
N3
DC
7
1_555
A
DG
4
A
N1
DG
4
11_555
hydrog
WATSON-CRICK
A
DC
7
A
N4
DC
7
1_555
A
DG
4
A
O6
DG
4
11_555
hydrog
WATSON-CRICK
A
DC
7
A
O2
DC
7
1_555
A
DG
4
A
N2
DG
4
11_555
hydrog
WATSON-CRICK
A
DG
8
A
N1
DG
8
1_555
A
DC
3
A
N3
DC
3
11_555
hydrog
WATSON-CRICK
A
DG
8
A
N2
DG
8
1_555
A
DC
3
A
O2
DC
3
11_555
hydrog
WATSON-CRICK
A
DG
8
A
O6
DG
8
1_555
A
DC
3
A
N4
DC
3
11_555
hydrog
WATSON-CRICK
A
DG
9
A
N1
DG
9
1_555
A
DC
2
A
N3
DC
2
11_555
hydrog
WATSON-CRICK
A
DG
9
A
N2
DG
9
1_555
A
DC
2
A
O2
DC
2
11_555
hydrog
WATSON-CRICK
A
DG
9
A
O6
DG
9
1_555
A
DC
2
A
N4
DC
2
11_555
hydrog
WATSON-CRICK
A
DT
10
A
N3
DT
10
1_555
A
DA
1
A
N1
DA
1
11_555
hydrog
WATSON-CRICK
A
DT
10
A
O4
DT
10
1_555
A
DA
1
A
N6
DA
1
11_555
DNA
DNA CONFORMATION, METAL IONS, DNA
1DNZ
PDB
1
1DNZ
1
10
1DNZ
1
10
1DNZ
A
1
1
10
BINDING SITE FOR RESIDUE MG A 21
A
MG
21
Software
6
BINDING SITE FOR RESIDUE MG A 22
A
MG
22
Software
12
A
HOH
125
D
HOH
6
1_555
A
HOH
126
D
HOH
6
1_555
A
HOH
127
D
HOH
6
1_555
A
HOH
128
D
HOH
6
1_555
A
HOH
129
D
HOH
6
1_555
A
HOH
130
D
HOH
6
1_555
A
HOH
101
D
HOH
12
1_555
A
HOH
102
D
HOH
12
11_555
A
HOH
131
D
HOH
12
1_555
A
HOH
132
D
HOH
12
11_555
A
HOH
132
D
HOH
12
1_555
A
HOH
133
D
HOH
12
1_555
A
HOH
133
D
HOH
12
11_555
A
HOH
134
D
HOH
12
11_555
A
HOH
134
D
HOH
12
1_555
A
HOH
135
D
HOH
12
1_555
A
HOH
136
D
HOH
12
11_555
A
HOH
136
D
HOH
12
1_555
178
hexagonal
P 61 2 2