0.011055 0.006382 0.000000 0.000000 0.012765 0.000000 0.000000 0.000000 0.022095 0.00000 0.00000 0.00000 Ostermann, A. Waschipky, R. Parak, F.G. Nienhaus, G.U. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 90.460 90.460 45.260 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C O 28.010 CARBON MONOXIDE non-polymer C6 H11 N O3 S 177.221 n N-FORMYLMETHIONINE L-peptide linking C6 H12 O6 180.156 alpha-D-glucopyranose alpha-D-glucose; D-glucose; glucose D-saccharide, alpha linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C34 H32 Fe N4 O4 616.487 PROTOPORPHYRIN IX CONTAINING FE HEME non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N C N 75 N O N 76 N N N 77 N C N 78 N O N 79 S C N 80 N C N 81 N C N 82 N S N 83 N C N 84 N C N 85 N O N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 S C N 99 R C N 100 S C N 101 S C N 102 R C N 103 N C N 104 N O N 105 N O N 106 N O N 107 N O N 108 N O N 109 N O N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N N N 123 S C N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N O N 130 N N N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N N N 143 S C N 144 N C N 145 N O N 146 N C N 147 N C N 148 N C N 149 N O N 150 N O N 151 N O N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N N N 162 N C N 163 N C N 164 N O N 165 N O N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N C N 172 N C N 173 N C N 174 N C Y 175 N C Y 176 N C Y 177 N C Y 178 N C N 179 N C N 180 N C N 181 N C N 182 N C N 183 N O N 184 N O N 185 N C N 186 N C N 187 N C N 188 N C N 189 N C N 190 N C N 191 N C Y 192 N C Y 193 N C Y 194 N C Y 195 N C N 196 N C N 197 N C N 198 N C N 199 N C N 200 N C N 201 N C N 202 N C N 203 N C N 204 N C N 205 N C N 206 N C N 207 N O N 208 N O Y 209 N N N 210 N N Y 211 N N N 212 N N N 213 N FE N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N N N 247 S C N 248 N C N 249 N O N 250 N C Y 251 N C Y 252 N N Y 253 N C Y 254 N C Y 255 N N N 256 N O N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N O N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 S C N 275 N C N 276 N C N 277 N C N 278 N O N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N N N 293 S C N 294 N C N 295 N O N 296 N C N 297 N C N 298 N C N 299 N C N 300 N O N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N N N 315 S C N 316 N C N 317 N O N 318 N C N 319 N C N 320 N C N 321 N C N 322 N N N 323 N O N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N N N 340 S C N 341 N C N 342 N O N 343 N C N 344 N C N 345 N S N 346 N C N 347 N O N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N C Y 368 N C Y 369 N C N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N N N 383 S C N 384 N C N 385 N O N 386 N C N 387 N C N 388 N C N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C N 404 N O N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N S N 414 N O N 415 N O N 416 N O N 417 N O N 418 N N N 419 S C N 420 N C N 421 N O N 422 R C N 423 N O N 424 N C N 425 N O N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N N N 436 S C N 437 N C N 438 N O N 439 N C Y 440 N C Y 441 N C Y 442 N C Y 443 N N Y 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N C N 449 N O N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N N N 463 S C N 464 N C N 465 N O N 466 N C Y 467 N C Y 468 N C Y 469 N C Y 470 N C Y 471 N C Y 472 N C N 473 N O N 474 N O N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N N N 487 S C N 488 N C N 489 N O N 490 N C N 491 N C N 492 N C N 493 N O N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N trip N 71 N sing N 72 N sing N 73 N sing N 74 N doub N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N doub N 170 N sing N 171 N doub N 172 N sing N 173 N sing Y 174 N doub Y 175 N sing Y 176 N sing N 177 N sing Y 178 N doub N 179 N sing Y 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N doub N 203 N sing N 204 N sing N 205 N sing Y 206 N sing Y 207 N sing Y 208 N doub N 209 N sing Y 210 N sing N 211 N sing Y 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N doub N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N doub N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing Y 255 N sing Y 256 N doub Y 257 N doub N 258 N sing Y 259 N sing N 260 N sing Y 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N doub N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing Y 363 N doub Y 364 N sing Y 365 N sing N 366 N sing Y 367 N doub N 368 N sing Y 369 N doub N 370 N sing Y 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N doub N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N doub N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N doub N 406 N doub N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N doub N 432 N sing N 433 N sing N 434 N sing N 435 N sing Y 436 N doub Y 437 N sing Y 438 N sing N 439 N sing Y 440 N doub Y 441 N sing Y 442 N sing N 443 N sing Y 444 N sing Y 445 N doub N 446 N sing Y 447 N doub N 448 N sing Y 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N doub N 460 N sing N 461 N sing N 462 N sing N 463 N sing Y 464 N doub Y 465 N sing Y 466 N sing N 467 N sing Y 468 N doub N 469 N sing Y 470 N doub N 471 N sing Y 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N doub N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing UK Nature NATUAS 0006 0028-0836 404 205 208 10.1038/35004622 10724176 Ligand binding and conformational motions in myoglobin. 2000 10.2210/pdb1do3/pdb pdb_00001do3 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 105.0 1 graphite AREA DETECTOR 1998-11-08 SIEMENS HI-STAR SINGLE WAVELENGTH M x-ray 1 1.54 1.0 1.54 ROTATING ANODE ENRAF-NONIUS FR591 17466.225 MYOGLOBIN M0(FME), L29W, D122N 1 man polymer 342.297 alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose 1 man branched 96.063 SULFATE ION 2 syn non-polymer 616.487 PROTOPORPHYRIN IX CONTAINING FE 1 syn non-polymer 28.010 CARBON MONOXIDE 1 syn non-polymer 18.015 water 191 nat water trehalose no yes (FME)VLSEGEWQLVLHVWAKVEADVAGHGQDIWIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAI LKKKGHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGNFGADAQGAMNKALELFRKDIAAKYKELGYQG MVLSEGEWQLVLHVWAKVEADVAGHGQDIWIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILKKK GHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGNFGADAQGAMNKALELFRKDIAAKYKELGYQG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sperm whale Physeter Escherichia sample 9755 Physeter catodon 562 Escherichia coli 1 3.06 59.80 BATCH CRYSTALLIZATION 8.5 CRYSTALS WERE GROWN IN 2.5M AMMONIUM SULFATE SOLUTION, BUFFERED WITH 20MM TRIS/ HCL TO PH 8.5. THE CRYSTALLIZATION SOLUTION WAS REPLACED IN STEPS AGAINST A SOLUTION CONTAINING 2.5M AMMONIUM SULFATE, 20MM TRIS, 300MG/ML TREHALOSE AT PH 8.5., BATCH CRYSTALLIZATION, temperature 292K 292 software atom_site chem_comp entity entity_name_com pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_molecule_features pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_struct_conn_angle pdbx_struct_special_symmetry struct_asym struct_conn struct_site struct_site_gen chem_comp database_2 struct_ref_seq_dif struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Version format compliance Version format compliance Refinement description Atomic model Data collection Derived calculations Structure summary Database references Structure summary Database references Data collection Refinement description 1 0 2000-01-05 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 2 0 2020-07-29 2 1 2021-11-03 2 2 2022-12-21 2 3 2023-09-20 _software.name _atom_site.auth_asym_id _atom_site.auth_seq_id _atom_site.label_asym_id _chem_comp.name _chem_comp.type _entity.formula_weight _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.type _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_special_symmetry.label_asym_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_ref_seq_dif.details GLC 349 n B GLC 1 GLC 350 n B GLC 2 DGlcpa a-D-glucopyranose a-D-Glcp Glc CARBONMONOXY-MYOGLOBIN MUTANT L29W AT 105K CARBONMONOXY-MYOGLOBIN (MUTANT L29W) AFTER PHOTOLYSIS AT T>180K CARBONMONOXY-MYOGLOBIN (MUTANT L29W) AFTER PHOTOLYSIS AT T<180K CARBONMONOXY-MYOGLOBIN (MUTANT L29W) REBINDING STRUCTURE AFTER PHOTOLYSIS AT T< 180K RCSB Y RCSB 1999-12-18 REL oligosaccharide DGlcpa1-1DGlcpa 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/1,2,1/[a2122h-1a_1-5]/1-1/a1-b1 2 PDB2Glycan 1.1.0 WURCS [][a-D-Glcp]{[(1+1)][a-D-Glcp]{}} 2 PDB-CARE LINUCS C1 O1 GLC GLC 1 2 2 O1 HO1 sing n n SO4 SULFATE ION HEM PROTOPORPHYRIN IX CONTAINING FE CMO CARBON MONOXIDE HOH water 1DO1 PDB experimental model Nutrient oligosaccharide with reducing-end-to-reducing-end glycosidic bond trehalose Oligosaccharide SO4 347 3 SO4 SO4 347 A SO4 348 3 SO4 SO4 348 A HEM 154 4 HEM HEM 154 A CMO 155 5 CMO CMO 155 A HOH 156 6 HOH HOH 156 A HOH 157 6 HOH HOH 157 A HOH 158 6 HOH HOH 158 A HOH 159 6 HOH HOH 159 A HOH 160 6 HOH HOH 160 A HOH 161 6 HOH HOH 161 A HOH 162 6 HOH HOH 162 A HOH 163 6 HOH HOH 163 A HOH 164 6 HOH HOH 164 A HOH 165 6 HOH HOH 165 A HOH 166 6 HOH HOH 166 A HOH 167 6 HOH HOH 167 A HOH 168 6 HOH HOH 168 A HOH 169 6 HOH HOH 169 A HOH 170 6 HOH HOH 170 A HOH 171 6 HOH HOH 171 A HOH 172 6 HOH HOH 172 A HOH 173 6 HOH HOH 173 A HOH 174 6 HOH HOH 174 A HOH 175 6 HOH HOH 175 A HOH 176 6 HOH HOH 176 A HOH 177 6 HOH HOH 177 A HOH 178 6 HOH HOH 178 A HOH 179 6 HOH HOH 179 A HOH 180 6 HOH HOH 180 A HOH 181 6 HOH HOH 181 A HOH 182 6 HOH HOH 182 A HOH 183 6 HOH HOH 183 A HOH 184 6 HOH HOH 184 A HOH 185 6 HOH HOH 185 A HOH 186 6 HOH HOH 186 A HOH 187 6 HOH HOH 187 A HOH 188 6 HOH HOH 188 A HOH 189 6 HOH HOH 189 A HOH 190 6 HOH HOH 190 A HOH 191 6 HOH HOH 191 A HOH 192 6 HOH HOH 192 A HOH 193 6 HOH HOH 193 A HOH 194 6 HOH HOH 194 A HOH 195 6 HOH HOH 195 A HOH 196 6 HOH HOH 196 A HOH 197 6 HOH HOH 197 A HOH 198 6 HOH HOH 198 A HOH 199 6 HOH HOH 199 A HOH 200 6 HOH HOH 200 A HOH 201 6 HOH HOH 201 A HOH 202 6 HOH HOH 202 A HOH 203 6 HOH HOH 203 A HOH 204 6 HOH HOH 204 A HOH 205 6 HOH HOH 205 A HOH 206 6 HOH HOH 206 A HOH 207 6 HOH HOH 207 A HOH 208 6 HOH HOH 208 A HOH 209 6 HOH HOH 209 A HOH 210 6 HOH HOH 210 A HOH 211 6 HOH HOH 211 A HOH 212 6 HOH HOH 212 A HOH 213 6 HOH HOH 213 A HOH 214 6 HOH HOH 214 A HOH 215 6 HOH HOH 215 A HOH 216 6 HOH HOH 216 A HOH 217 6 HOH HOH 217 A HOH 218 6 HOH HOH 218 A HOH 219 6 HOH HOH 219 A HOH 220 6 HOH HOH 220 A HOH 221 6 HOH HOH 221 A HOH 222 6 HOH HOH 222 A HOH 223 6 HOH HOH 223 A HOH 224 6 HOH HOH 224 A HOH 225 6 HOH HOH 225 A HOH 226 6 HOH HOH 226 A HOH 227 6 HOH HOH 227 A HOH 228 6 HOH HOH 228 A HOH 229 6 HOH HOH 229 A HOH 230 6 HOH HOH 230 A HOH 231 6 HOH HOH 231 A HOH 232 6 HOH HOH 232 A HOH 233 6 HOH HOH 233 A HOH 234 6 HOH HOH 234 A HOH 235 6 HOH HOH 235 A HOH 236 6 HOH HOH 236 A HOH 237 6 HOH HOH 237 A HOH 238 6 HOH HOH 238 A HOH 239 6 HOH HOH 239 A HOH 240 6 HOH HOH 240 A HOH 241 6 HOH HOH 241 A HOH 242 6 HOH HOH 242 A HOH 243 6 HOH HOH 243 A HOH 244 6 HOH HOH 244 A HOH 245 6 HOH HOH 245 A HOH 246 6 HOH HOH 246 A HOH 247 6 HOH HOH 247 A HOH 248 6 HOH HOH 248 A HOH 249 6 HOH HOH 249 A HOH 250 6 HOH HOH 250 A HOH 251 6 HOH HOH 251 A HOH 252 6 HOH HOH 252 A HOH 253 6 HOH HOH 253 A HOH 254 6 HOH HOH 254 A HOH 255 6 HOH HOH 255 A HOH 256 6 HOH HOH 256 A HOH 257 6 HOH HOH 257 A HOH 258 6 HOH HOH 258 A HOH 259 6 HOH HOH 259 A HOH 260 6 HOH HOH 260 A HOH 261 6 HOH HOH 261 A HOH 262 6 HOH HOH 262 A HOH 263 6 HOH HOH 263 A HOH 264 6 HOH HOH 264 A HOH 265 6 HOH HOH 265 A HOH 266 6 HOH HOH 266 A HOH 267 6 HOH HOH 267 A HOH 268 6 HOH HOH 268 A HOH 269 6 HOH HOH 269 A HOH 270 6 HOH HOH 270 A HOH 271 6 HOH HOH 271 A HOH 272 6 HOH HOH 272 A HOH 273 6 HOH HOH 273 A HOH 274 6 HOH HOH 274 A HOH 275 6 HOH HOH 275 A HOH 276 6 HOH HOH 276 A HOH 277 6 HOH HOH 277 A HOH 278 6 HOH HOH 278 A HOH 279 6 HOH HOH 279 A HOH 280 6 HOH HOH 280 A HOH 281 6 HOH HOH 281 A HOH 282 6 HOH HOH 282 A HOH 283 6 HOH HOH 283 A HOH 284 6 HOH HOH 284 A HOH 285 6 HOH HOH 285 A HOH 286 6 HOH HOH 286 A HOH 287 6 HOH HOH 287 A HOH 288 6 HOH HOH 288 A HOH 289 6 HOH HOH 289 A HOH 290 6 HOH HOH 290 A HOH 291 6 HOH HOH 291 A HOH 292 6 HOH HOH 292 A HOH 293 6 HOH HOH 293 A HOH 294 6 HOH HOH 294 A HOH 295 6 HOH HOH 295 A HOH 296 6 HOH HOH 296 A HOH 297 6 HOH HOH 297 A HOH 298 6 HOH HOH 298 A HOH 299 6 HOH HOH 299 A HOH 300 6 HOH HOH 300 A HOH 301 6 HOH HOH 301 A HOH 302 6 HOH HOH 302 A HOH 303 6 HOH HOH 303 A HOH 304 6 HOH HOH 304 A HOH 305 6 HOH HOH 305 A HOH 306 6 HOH HOH 306 A HOH 307 6 HOH HOH 307 A HOH 308 6 HOH HOH 308 A HOH 309 6 HOH HOH 309 A HOH 310 6 HOH HOH 310 A HOH 311 6 HOH HOH 311 A HOH 312 6 HOH HOH 312 A HOH 313 6 HOH HOH 313 A HOH 314 6 HOH HOH 314 A HOH 315 6 HOH HOH 315 A HOH 316 6 HOH HOH 316 A HOH 317 6 HOH HOH 317 A HOH 318 6 HOH HOH 318 A HOH 319 6 HOH HOH 319 A HOH 320 6 HOH HOH 320 A HOH 321 6 HOH HOH 321 A HOH 322 6 HOH HOH 322 A HOH 323 6 HOH HOH 323 A HOH 324 6 HOH HOH 324 A HOH 325 6 HOH HOH 325 A HOH 326 6 HOH HOH 326 A HOH 327 6 HOH HOH 327 A HOH 328 6 HOH HOH 328 A HOH 329 6 HOH HOH 329 A HOH 330 6 HOH HOH 330 A HOH 331 6 HOH HOH 331 A HOH 332 6 HOH HOH 332 A HOH 333 6 HOH HOH 333 A HOH 334 6 HOH HOH 334 A HOH 335 6 HOH HOH 335 A HOH 336 6 HOH HOH 336 A HOH 337 6 HOH HOH 337 A HOH 338 6 HOH HOH 338 A HOH 339 6 HOH HOH 339 A HOH 340 6 HOH HOH 340 A HOH 341 6 HOH HOH 341 A HOH 342 6 HOH HOH 342 A HOH 343 6 HOH HOH 343 A HOH 344 6 HOH HOH 344 A HOH 345 6 HOH HOH 345 A HOH 346 6 HOH HOH 346 A n 1 0 A VAL 1 n 2 VAL 1 A LEU 2 n 3 LEU 2 A SER 3 n 4 SER 3 A GLU 4 n 5 GLU 4 A GLY 5 n 6 GLY 5 A GLU 6 n 7 GLU 6 A TRP 7 n 8 TRP 7 A GLN 8 n 9 GLN 8 A LEU 9 n 10 LEU 9 A VAL 10 n 11 VAL 10 A LEU 11 n 12 LEU 11 A HIS 12 n 13 HIS 12 A VAL 13 n 14 VAL 13 A TRP 14 n 15 TRP 14 A ALA 15 n 16 ALA 15 A LYS 16 n 17 LYS 16 A VAL 17 n 18 VAL 17 A GLU 18 n 19 GLU 18 A ALA 19 n 20 ALA 19 A ASP 20 n 21 ASP 20 A VAL 21 n 22 VAL 21 A ALA 22 n 23 ALA 22 A GLY 23 n 24 GLY 23 A HIS 24 n 25 HIS 24 A GLY 25 n 26 GLY 25 A GLN 26 n 27 GLN 26 A ASP 27 n 28 ASP 27 A ILE 28 n 29 ILE 28 A TRP 29 n 30 TRP 29 A ILE 30 n 31 ILE 30 A ARG 31 n 32 ARG 31 A LEU 32 n 33 LEU 32 A PHE 33 n 34 PHE 33 A LYS 34 n 35 LYS 34 A SER 35 n 36 SER 35 A HIS 36 n 37 HIS 36 A PRO 37 n 38 PRO 37 A GLU 38 n 39 GLU 38 A THR 39 n 40 THR 39 A LEU 40 n 41 LEU 40 A GLU 41 n 42 GLU 41 A LYS 42 n 43 LYS 42 A PHE 43 n 44 PHE 43 A ASP 44 n 45 ASP 44 A ARG 45 n 46 ARG 45 A PHE 46 n 47 PHE 46 A LYS 47 n 48 LYS 47 A HIS 48 n 49 HIS 48 A LEU 49 n 50 LEU 49 A LYS 50 n 51 LYS 50 A THR 51 n 52 THR 51 A GLU 52 n 53 GLU 52 A ALA 53 n 54 ALA 53 A GLU 54 n 55 GLU 54 A MET 55 n 56 MET 55 A LYS 56 n 57 LYS 56 A ALA 57 n 58 ALA 57 A SER 58 n 59 SER 58 A GLU 59 n 60 GLU 59 A ASP 60 n 61 ASP 60 A LEU 61 n 62 LEU 61 A LYS 62 n 63 LYS 62 A LYS 63 n 64 LYS 63 A HIS 64 n 65 HIS 64 A GLY 65 n 66 GLY 65 A VAL 66 n 67 VAL 66 A THR 67 n 68 THR 67 A VAL 68 n 69 VAL 68 A LEU 69 n 70 LEU 69 A THR 70 n 71 THR 70 A ALA 71 n 72 ALA 71 A LEU 72 n 73 LEU 72 A GLY 73 n 74 GLY 73 A ALA 74 n 75 ALA 74 A ILE 75 n 76 ILE 75 A LEU 76 n 77 LEU 76 A LYS 77 n 78 LYS 77 A LYS 78 n 79 LYS 78 A LYS 79 n 80 LYS 79 A GLY 80 n 81 GLY 80 A HIS 81 n 82 HIS 81 A HIS 82 n 83 HIS 82 A GLU 83 n 84 GLU 83 A ALA 84 n 85 ALA 84 A GLU 85 n 86 GLU 85 A LEU 86 n 87 LEU 86 A LYS 87 n 88 LYS 87 A PRO 88 n 89 PRO 88 A LEU 89 n 90 LEU 89 A ALA 90 n 91 ALA 90 A GLN 91 n 92 GLN 91 A SER 92 n 93 SER 92 A HIS 93 n 94 HIS 93 A ALA 94 n 95 ALA 94 A THR 95 n 96 THR 95 A LYS 96 n 97 LYS 96 A HIS 97 n 98 HIS 97 A LYS 98 n 99 LYS 98 A ILE 99 n 100 ILE 99 A PRO 100 n 101 PRO 100 A ILE 101 n 102 ILE 101 A LYS 102 n 103 LYS 102 A TYR 103 n 104 TYR 103 A LEU 104 n 105 LEU 104 A GLU 105 n 106 GLU 105 A PHE 106 n 107 PHE 106 A ILE 107 n 108 ILE 107 A SER 108 n 109 SER 108 A GLU 109 n 110 GLU 109 A ALA 110 n 111 ALA 110 A ILE 111 n 112 ILE 111 A ILE 112 n 113 ILE 112 A HIS 113 n 114 HIS 113 A VAL 114 n 115 VAL 114 A LEU 115 n 116 LEU 115 A HIS 116 n 117 HIS 116 A SER 117 n 118 SER 117 A ARG 118 n 119 ARG 118 A HIS 119 n 120 HIS 119 A PRO 120 n 121 PRO 120 A GLY 121 n 122 GLY 121 A ASN 122 n 123 ASN 122 A PHE 123 n 124 PHE 123 A GLY 124 n 125 GLY 124 A ALA 125 n 126 ALA 125 A ASP 126 n 127 ASP 126 A ALA 127 n 128 ALA 127 A GLN 128 n 129 GLN 128 A GLY 129 n 130 GLY 129 A ALA 130 n 131 ALA 130 A MET 131 n 132 MET 131 A ASN 132 n 133 ASN 132 A LYS 133 n 134 LYS 133 A ALA 134 n 135 ALA 134 A LEU 135 n 136 LEU 135 A GLU 136 n 137 GLU 136 A LEU 137 n 138 LEU 137 A PHE 138 n 139 PHE 138 A ARG 139 n 140 ARG 139 A LYS 140 n 141 LYS 140 A ASP 141 n 142 ASP 141 A ILE 142 n 143 ILE 142 A ALA 143 n 144 ALA 143 A ALA 144 n 145 ALA 144 A LYS 145 n 146 LYS 145 A TYR 146 n 147 TYR 146 A LYS 147 n 148 LYS 147 A GLU 148 n 149 GLU 148 A LEU 149 n 150 LEU 149 A GLY 150 n 151 GLY 150 A TYR 151 n 152 TYR 151 A GLN 152 n 153 GLN 152 A GLY 153 n 154 GLY 153 A author_defined_assembly 1 monomeric A HIS 93 A NE2 HIS 94 1_555 A HEM 154 E FE HEM 1_555 A HEM 154 E NA HEM 1_555 91.2 A HIS 93 A NE2 HIS 94 1_555 A HEM 154 E FE HEM 1_555 A HEM 154 E NB HEM 1_555 90.8 A HEM 154 E NA HEM 1_555 A HEM 154 E FE HEM 1_555 A HEM 154 E NB HEM 1_555 88.5 A HIS 93 A NE2 HIS 94 1_555 A HEM 154 E FE HEM 1_555 A HEM 154 E NC HEM 1_555 100.5 A HEM 154 E NA HEM 1_555 A HEM 154 E FE HEM 1_555 A HEM 154 E NC HEM 1_555 167.9 A HEM 154 E NB HEM 1_555 A HEM 154 E FE HEM 1_555 A HEM 154 E NC HEM 1_555 88.4 A HIS 93 A NE2 HIS 94 1_555 A HEM 154 E FE HEM 1_555 A HEM 154 E ND HEM 1_555 99.6 A HEM 154 E NA HEM 1_555 A HEM 154 E FE HEM 1_555 A HEM 154 E ND HEM 1_555 89.8 A HEM 154 E NB HEM 1_555 A HEM 154 E FE HEM 1_555 A HEM 154 E ND HEM 1_555 169.5 A HEM 154 E NC HEM 1_555 A HEM 154 E FE HEM 1_555 A HEM 154 E ND HEM 1_555 91.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A HOH 246 G HOH 1 A HOH 252 G HOH 1 A FME 0 A FME 1 1 Y 1 A ASP 20 -158.62 73.67 PARHCSDX.PRO tophcsdx.pro PARAM19X.HEME toph19x.heme NO ANGLE RESTRAINTS WERE USED FOR THE HIS 93 WITH RESPECT TO THE IRON ATOM. BOND RESTRAINTS FOR THE HIS 93 AND FOR THE FOUR PYRROLE NITROGEN ATOMS TO THE IRON ATOM WERE WEAKENED FROM THE STANDARD X-PLOR VALUES (PARAM19X.HEME). THERE IS NEARLY NO ELECTRON DENSITY FOR THE N-FORMYL-MET. THIS RESIDUE WAS NOT INCLUDED INTO THE MODEL. ELECTRON DENSITY FEATURES CLOSE TO THIS SITE WERE MODELED BY WATER MOLECULES. ONE TREHALOSE MOLECULE IS BOUND TO THE SURFACE OF THE MYOGLOBIN MOLECULE. THE WATER MOLECULES NUMBER 246 AND 252 ARE ON OR CLOSE TO SPECIAL POSITIONS. THE ORIENTATION OF THE CO-MOLECULE CANNOT BE DETERMINED FROM THE DATA AND WAS ARBITRARILY ASSIGNED. ELECTRON DENSITY FOR THE CO-MOLECULE IS FOUND IN THE PROXIMAL CAVITY 0.2180000 0.1930000 0.1950000 0.1950000 1.55 7.0 2900 29030 29030 95.2 RANDOM 10000000.0 0.0 1 free r 0.0 1DO1 ENGH AND HUBER 7.0 0.15 1.55 7.0 191 1492 78 0 1223 0.007 1.1 18.1 1.16 1.5 2.0 2.0 2.5 0.2520000 0.2440000 1.62 340 2866 8 83.8 9.8 1.55 10.0 1DO3 29266 2.0 0.0460000 1 14.0 6.5 95.1 0.1660000 1.55 1.60 4.2 3.1 84.1 refinement X-PLOR 3.1 data reduction SAINT (SIEMENS) data scaling SAINT (SIEMENS) data scaling CCP4 (AGROVATA data scaling TRUNCATE CARBONMONOXY-MYOGLOBIN (MUTANT L29W) AFTER PHOTOLYSIS AT T>180K 1 N N 2 N N 3 N N 3 N N 4 N N 5 N N 6 N N A SER 3 A SER 4 HELX_P A GLU 18 A GLU 19 1 1 16 A ASP 20 A ASP 21 HELX_P A HIS 36 A HIS 37 1 2 17 A PRO 37 A PRO 38 HELX_P A PHE 43 A PHE 44 5 3 7 A THR 51 A THR 52 HELX_P A SER 58 A SER 59 1 4 8 A SER 58 A SER 59 HELX_P A LYS 78 A LYS 79 1 5 21 A HIS 82 A HIS 83 HELX_P A LYS 96 A LYS 97 1 6 15 A PRO 100 A PRO 101 HELX_P A HIS 119 A HIS 120 1 7 20 A GLY 124 A GLY 125 HELX_P A GLY 150 A GLY 151 1 8 27 covale 1.443 both B GLC 1 B C1 GLC 1_555 B GLC 2 B O1 GLC 1_555 metalc 2.162 A HIS 93 A NE2 HIS 94 1_555 A HEM 154 E FE HEM 1_555 OXYGEN STORAGE/TRANSPORT HEME, RESPIRATORY PROTEIN, PHOTOLYSED MYOGLOBIN, LIGAND MIGRATION, OXYGEN STORAGE-TRANSPORT COMPLEX MYG_PHYCA UNP 1 P02185 1 153 1DO3 1 153 P02185 A 1 2 154 1 MET modified residue FME 0 1DO3 A P02185 UNP 1 1 LEU engineered mutation TRP 29 1DO3 A P02185 UNP 29 30 1 ASP engineered mutation ASN 122 1DO3 A P02185 UNP 122 123 168 P 6