0.011913
0.006878
0.000000
0.000000
0.013756
0.000000
0.000000
0.000000
0.005231
0.00000
0.00000
0.00000
Hoffman, G.R.
Nassar, N.
Cerione, R.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
9
90.00
90.00
120.00
83.940
83.940
191.160
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C4 H9 N O2 S
135.185
n
O-METHYLCYSTEINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H15 N5 O11 P2
443.201
n
GUANOSINE-5'-DIPHOSPHATE
RNA linking
C20 H34
274.484
GERAN-8-YL GERAN
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
100
345
356
10.1016/S0092-8674(00)80670-4
10676816
Structure of the Rho family GTP-binding protein Cdc42 in complex with the multifunctional regulator RhoGDI.
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
1999-04-15
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
0.98
1.0
F2
CHESS
0.98
SYNCHROTRON
CHESS BEAMLINE F2
21254.436
PROTEIN (GTP-BINDING PROTEIN)
1
man
polymer
24633.707
PROTEIN (GDP-DISSOCIATION INHIBITOR 1)
1
man
polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
443.201
GUANOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
274.484
GERAN-8-YL GERAN
1
syn
non-polymer
18.015
water
50
nat
water
CDC42
RHO GDI 1
no
yes
GSHMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDV
FLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVEC
SALTQKGLKNVFDEAILAALEPPEPKKSRR(CMT)
GSHMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDV
FLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVEC
SALTQKGLKNVFDEAILAALEPPEPKKSRRC
A
polypeptide(L)
no
no
GSPGISGGGGGILGLMAEQEPTAEQLAQIAAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADP
NVPNVVVTRLTLVCSTAPGPLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYM
VGSYGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDDDRTDHLSWEWNLTIKKEWKD
GSPGISGGGGGILGLMAEQEPTAEQLAQIAAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADP
NVPNVVVTRLTLVCSTAPGPLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQHTYRKGVKIDKTDYM
VGSYGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDDDRTDHLSWEWNLTIKKEWKD
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
Homo sapiens
SF9 CELLS
10469
unidentified baculovirus
cattle
Bos
Escherichia
sample
9913
Bos taurus
562
Escherichia coli
PGEX-KG
3
2.82
56.43
VAPOR DIFFUSION, HANGING DROP
7.4
15% PEG 4000,
100 mM Glutamic Acid,
25 mM MgSO4,
50 mM Tris,
2 mM NaN3,
2 mM LDAO
, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 18K, temperature 291K
291
repository
Initial release
Version format compliance
Version format compliance
1
0
2000-02-09
1
1
2008-04-27
1
2
2011-07-13
RCSB
Y
RCSB
1999-12-20
REL
MG
MAGNESIUM ION
GDP
GUANOSINE-5'-DIPHOSPHATE
GER
GERAN-8-YL GERAN
HOH
water
MG2
199
3
MG
MG
199
A
MG2
200
3
MG
MG
200
A
GDP
198
4
GDP
GDP
198
A
GER
952
5
GER
GER
952
A
WAT
701
6
HOH
HOH
701
A
WAT
702
6
HOH
HOH
702
A
WAT
703
6
HOH
HOH
703
A
WAT
704
6
HOH
HOH
704
A
WAT
705
6
HOH
HOH
705
A
WAT
706
6
HOH
HOH
706
A
WAT
707
6
HOH
HOH
707
A
WAT
709
6
HOH
HOH
709
A
WAT
710
6
HOH
HOH
710
A
WAT
711
6
HOH
HOH
711
A
WAT
712
6
HOH
HOH
712
A
WAT
713
6
HOH
HOH
713
A
WAT
714
6
HOH
HOH
714
A
WAT
715
6
HOH
HOH
715
A
WAT
716
6
HOH
HOH
716
A
WAT
718
6
HOH
HOH
718
A
WAT
720
6
HOH
HOH
720
A
WAT
721
6
HOH
HOH
721
A
WAT
722
6
HOH
HOH
722
A
WAT
723
6
HOH
HOH
723
A
WAT
724
6
HOH
HOH
724
A
WAT
725
6
HOH
HOH
725
A
WAT
726
6
HOH
HOH
726
A
WAT
728
6
HOH
HOH
728
A
WAT
729
6
HOH
HOH
729
A
WAT
730
6
HOH
HOH
730
A
WAT
731
6
HOH
HOH
731
A
WAT
732
6
HOH
HOH
732
A
WAT
733
6
HOH
HOH
733
A
WAT
734
6
HOH
HOH
734
A
WAT
735
6
HOH
HOH
735
A
WAT
736
6
HOH
HOH
736
A
WAT
737
6
HOH
HOH
737
A
WAT
745
6
HOH
HOH
745
A
WAT
747
6
HOH
HOH
747
A
WAT
748
6
HOH
HOH
748
A
WAT
749
6
HOH
HOH
749
A
WAT
708
6
HOH
HOH
708
B
WAT
717
6
HOH
HOH
717
B
WAT
719
6
HOH
HOH
719
B
WAT
727
6
HOH
HOH
727
B
WAT
738
6
HOH
HOH
738
B
WAT
739
6
HOH
HOH
739
B
WAT
740
6
HOH
HOH
740
B
WAT
741
6
HOH
HOH
741
B
WAT
742
6
HOH
HOH
742
B
WAT
743
6
HOH
HOH
743
B
WAT
744
6
HOH
HOH
744
B
WAT
746
6
HOH
HOH
746
B
WAT
750
6
HOH
HOH
750
B
GLY
-2
n
1
GLY
-2
A
SER
-1
n
2
SER
-1
A
HIS
0
n
3
HIS
0
A
MET
1
n
4
MET
1
A
GLN
2
n
5
GLN
2
A
THR
3
n
6
THR
3
A
ILE
4
n
7
ILE
4
A
LYS
5
n
8
LYS
5
A
CYS
6
n
9
CYS
6
A
VAL
7
n
10
VAL
7
A
VAL
8
n
11
VAL
8
A
VAL
9
n
12
VAL
9
A
GLY
10
n
13
GLY
10
A
ASP
11
n
14
ASP
11
A
GLY
12
n
15
GLY
12
A
ALA
13
n
16
ALA
13
A
VAL
14
n
17
VAL
14
A
GLY
15
n
18
GLY
15
A
LYS
16
n
19
LYS
16
A
THR
17
n
20
THR
17
A
CYS
18
n
21
CYS
18
A
LEU
19
n
22
LEU
19
A
LEU
20
n
23
LEU
20
A
ILE
21
n
24
ILE
21
A
SER
22
n
25
SER
22
A
TYR
23
n
26
TYR
23
A
THR
24
n
27
THR
24
A
THR
25
n
28
THR
25
A
ASN
26
n
29
ASN
26
A
LYS
27
n
30
LYS
27
A
PHE
28
n
31
PHE
28
A
PRO
29
n
32
PRO
29
A
SER
30
n
33
SER
30
A
GLU
31
n
34
GLU
31
A
TYR
32
n
35
TYR
32
A
VAL
33
n
36
VAL
33
A
PRO
34
n
37
PRO
34
A
THR
35
n
38
THR
35
A
VAL
36
n
39
VAL
36
A
PHE
37
n
40
PHE
37
A
ASP
38
n
41
ASP
38
A
ASN
39
n
42
ASN
39
A
TYR
40
n
43
TYR
40
A
ALA
41
n
44
ALA
41
A
VAL
42
n
45
VAL
42
A
THR
43
n
46
THR
43
A
VAL
44
n
47
VAL
44
A
MET
45
n
48
MET
45
A
ILE
46
n
49
ILE
46
A
GLY
47
n
50
GLY
47
A
GLY
48
n
51
GLY
48
A
GLU
49
n
52
GLU
49
A
PRO
50
n
53
PRO
50
A
TYR
51
n
54
TYR
51
A
THR
52
n
55
THR
52
A
LEU
53
n
56
LEU
53
A
GLY
54
n
57
GLY
54
A
LEU
55
n
58
LEU
55
A
PHE
56
n
59
PHE
56
A
ASP
57
n
60
ASP
57
A
THR
58
n
61
THR
58
A
ALA
59
n
62
ALA
59
A
GLY
60
n
63
GLY
60
A
GLN
61
n
64
GLN
61
A
GLU
62
n
65
GLU
62
A
ASP
63
n
66
ASP
63
A
TYR
64
n
67
TYR
64
A
ASP
65
n
68
ASP
65
A
ARG
66
n
69
ARG
66
A
LEU
67
n
70
LEU
67
A
ARG
68
n
71
ARG
68
A
PRO
69
n
72
PRO
69
A
LEU
70
n
73
LEU
70
A
SER
71
n
74
SER
71
A
TYR
72
n
75
TYR
72
A
PRO
73
n
76
PRO
73
A
GLN
74
n
77
GLN
74
A
THR
75
n
78
THR
75
A
ASP
76
n
79
ASP
76
A
VAL
77
n
80
VAL
77
A
PHE
78
n
81
PHE
78
A
LEU
79
n
82
LEU
79
A
VAL
80
n
83
VAL
80
A
CYS
81
n
84
CYS
81
A
PHE
82
n
85
PHE
82
A
SER
83
n
86
SER
83
A
VAL
84
n
87
VAL
84
A
VAL
85
n
88
VAL
85
A
SER
86
n
89
SER
86
A
PRO
87
n
90
PRO
87
A
SER
88
n
91
SER
88
A
SER
89
n
92
SER
89
A
PHE
90
n
93
PHE
90
A
GLU
91
n
94
GLU
91
A
ASN
92
n
95
ASN
92
A
VAL
93
n
96
VAL
93
A
LYS
94
n
97
LYS
94
A
GLU
95
n
98
GLU
95
A
LYS
96
n
99
LYS
96
A
TRP
97
n
100
TRP
97
A
VAL
98
n
101
VAL
98
A
PRO
99
n
102
PRO
99
A
GLU
100
n
103
GLU
100
A
ILE
101
n
104
ILE
101
A
THR
102
n
105
THR
102
A
HIS
103
n
106
HIS
103
A
HIS
104
n
107
HIS
104
A
CYS
105
n
108
CYS
105
A
PRO
106
n
109
PRO
106
A
LYS
107
n
110
LYS
107
A
THR
108
n
111
THR
108
A
PRO
109
n
112
PRO
109
A
PHE
110
n
113
PHE
110
A
LEU
111
n
114
LEU
111
A
LEU
112
n
115
LEU
112
A
VAL
113
n
116
VAL
113
A
GLY
114
n
117
GLY
114
A
THR
115
n
118
THR
115
A
GLN
116
n
119
GLN
116
A
ILE
117
n
120
ILE
117
A
ASP
118
n
121
ASP
118
A
LEU
119
n
122
LEU
119
A
ARG
120
n
123
ARG
120
A
ASP
121
n
124
ASP
121
A
ASP
122
n
125
ASP
122
A
PRO
123
n
126
PRO
123
A
SER
124
n
127
SER
124
A
THR
125
n
128
THR
125
A
ILE
126
n
129
ILE
126
A
GLU
127
n
130
GLU
127
A
LYS
128
n
131
LYS
128
A
LEU
129
n
132
LEU
129
A
ALA
130
n
133
ALA
130
A
LYS
131
n
134
LYS
131
A
ASN
132
n
135
ASN
132
A
LYS
133
n
136
LYS
133
A
GLN
134
n
137
GLN
134
A
LYS
135
n
138
LYS
135
A
PRO
136
n
139
PRO
136
A
ILE
137
n
140
ILE
137
A
THR
138
n
141
THR
138
A
PRO
139
n
142
PRO
139
A
GLU
140
n
143
GLU
140
A
THR
141
n
144
THR
141
A
ALA
142
n
145
ALA
142
A
GLU
143
n
146
GLU
143
A
LYS
144
n
147
LYS
144
A
LEU
145
n
148
LEU
145
A
ALA
146
n
149
ALA
146
A
ARG
147
n
150
ARG
147
A
ASP
148
n
151
ASP
148
A
LEU
149
n
152
LEU
149
A
LYS
150
n
153
LYS
150
A
ALA
151
n
154
ALA
151
A
VAL
152
n
155
VAL
152
A
LYS
153
n
156
LYS
153
A
TYR
154
n
157
TYR
154
A
VAL
155
n
158
VAL
155
A
GLU
156
n
159
GLU
156
A
CYS
157
n
160
CYS
157
A
SER
158
n
161
SER
158
A
ALA
159
n
162
ALA
159
A
LEU
160
n
163
LEU
160
A
THR
161
n
164
THR
161
A
GLN
162
n
165
GLN
162
A
LYS
163
n
166
LYS
163
A
GLY
164
n
167
GLY
164
A
LEU
165
n
168
LEU
165
A
LYS
166
n
169
LYS
166
A
ASN
167
n
170
ASN
167
A
VAL
168
n
171
VAL
168
A
PHE
169
n
172
PHE
169
A
ASP
170
n
173
ASP
170
A
GLU
171
n
174
GLU
171
A
ALA
172
n
175
ALA
172
A
ILE
173
n
176
ILE
173
A
LEU
174
n
177
LEU
174
A
ALA
175
n
178
ALA
175
A
ALA
176
n
179
ALA
176
A
LEU
177
n
180
LEU
177
A
GLU
178
n
181
GLU
178
A
PRO
179
n
182
PRO
179
A
PRO
180
n
183
PRO
180
A
GLU
181
n
184
GLU
181
A
PRO
182
n
185
PRO
182
A
LYS
183
n
186
LYS
183
A
LYS
184
n
187
LYS
184
A
SER
185
n
188
SER
185
A
ARG
186
n
189
ARG
186
A
ARG
187
n
190
ARG
187
A
CYS
188
n
191
CMT
188
A
n
1
-14
B
n
2
-13
B
n
3
-12
B
n
4
-11
B
n
5
-10
B
n
6
-9
B
n
7
-8
B
n
8
-7
B
n
9
-6
B
n
10
-5
B
n
11
-4
B
n
12
-3
B
n
13
-2
B
n
14
-1
B
n
15
0
B
n
16
1
B
n
17
2
B
n
18
3
B
n
19
4
B
ALA
305
n
20
GLU
5
B
PRO
306
n
21
PRO
6
B
THR
307
n
22
THR
7
B
ALA
308
n
23
ALA
8
B
GLU
309
n
24
GLU
9
B
GLN
310
n
25
GLN
10
B
LEU
311
n
26
LEU
11
B
ALA
312
n
27
ALA
12
B
GLN
313
n
28
GLN
13
B
ILE
314
n
29
ILE
14
B
ALA
315
n
30
ALA
15
B
ALA
316
n
31
ALA
16
B
GLU
317
n
32
GLU
17
B
ASN
318
n
33
ASN
18
B
GLU
319
n
34
GLU
19
B
GLU
320
n
35
GLU
20
B
ASP
321
n
36
ASP
21
B
GLU
322
n
37
GLU
22
B
HIS
323
n
38
HIS
23
B
SER
324
n
39
SER
24
B
VAL
325
n
40
VAL
25
B
ASN
326
n
41
ASN
26
B
TYR
327
n
42
TYR
27
B
LYS
328
n
43
LYS
28
B
PRO
329
n
44
PRO
29
B
PRO
330
n
45
PRO
30
B
ALA
331
n
46
ALA
31
B
GLN
332
n
47
GLN
32
B
LYS
333
n
48
LYS
33
B
SER
334
n
49
SER
34
B
ILE
335
n
50
ILE
35
B
GLN
336
n
51
GLN
36
B
GLU
337
n
52
GLU
37
B
ILE
338
n
53
ILE
38
B
GLN
339
n
54
GLN
39
B
GLU
340
n
55
GLU
40
B
LEU
341
n
56
LEU
41
B
ASP
342
n
57
ASP
42
B
LYS
343
n
58
LYS
43
B
ASP
344
n
59
ASP
44
B
ASP
345
n
60
ASP
45
B
GLU
346
n
61
GLU
46
B
SER
347
n
62
SER
47
B
LEU
348
n
63
LEU
48
B
ARG
349
n
64
ARG
49
B
LYS
350
n
65
LYS
50
B
TYR
351
n
66
TYR
51
B
LYS
352
n
67
LYS
52
B
GLU
353
n
68
GLU
53
B
ALA
354
n
69
ALA
54
B
LEU
355
n
70
LEU
55
B
LEU
356
n
71
LEU
56
B
GLY
357
n
72
GLY
57
B
ARG
358
n
73
ARG
58
B
VAL
359
n
74
VAL
59
B
ALA
360
n
75
ALA
60
B
VAL
361
n
76
VAL
61
B
SER
362
n
77
SER
62
B
ALA
363
n
78
ALA
63
B
ASP
364
n
79
ASP
64
B
PRO
365
n
80
PRO
65
B
ASN
366
n
81
ASN
66
B
VAL
367
n
82
VAL
67
B
PRO
368
n
83
PRO
68
B
ASN
369
n
84
ASN
69
B
VAL
370
n
85
VAL
70
B
VAL
371
n
86
VAL
71
B
VAL
372
n
87
VAL
72
B
THR
373
n
88
THR
73
B
ARG
374
n
89
ARG
74
B
LEU
375
n
90
LEU
75
B
THR
376
n
91
THR
76
B
LEU
377
n
92
LEU
77
B
VAL
378
n
93
VAL
78
B
CYS
379
n
94
CYS
79
B
SER
380
n
95
SER
80
B
THR
381
n
96
THR
81
B
ALA
382
n
97
ALA
82
B
PRO
383
n
98
PRO
83
B
GLY
384
n
99
GLY
84
B
PRO
385
n
100
PRO
85
B
LEU
386
n
101
LEU
86
B
GLU
387
n
102
GLU
87
B
LEU
388
n
103
LEU
88
B
ASP
389
n
104
ASP
89
B
LEU
390
n
105
LEU
90
B
THR
391
n
106
THR
91
B
GLY
392
n
107
GLY
92
B
ASP
393
n
108
ASP
93
B
LEU
394
n
109
LEU
94
B
GLU
395
n
110
GLU
95
B
SER
396
n
111
SER
96
B
PHE
397
n
112
PHE
97
B
LYS
398
n
113
LYS
98
B
LYS
399
n
114
LYS
99
B
GLN
400
n
115
GLN
100
B
SER
401
n
116
SER
101
B
PHE
402
n
117
PHE
102
B
VAL
403
n
118
VAL
103
B
LEU
404
n
119
LEU
104
B
LYS
405
n
120
LYS
105
B
GLU
406
n
121
GLU
106
B
GLY
407
n
122
GLY
107
B
VAL
408
n
123
VAL
108
B
GLU
409
n
124
GLU
109
B
TYR
410
n
125
TYR
110
B
ARG
411
n
126
ARG
111
B
ILE
412
n
127
ILE
112
B
LYS
413
n
128
LYS
113
B
ILE
414
n
129
ILE
114
B
SER
415
n
130
SER
115
B
PHE
416
n
131
PHE
116
B
ARG
417
n
132
ARG
117
B
VAL
418
n
133
VAL
118
B
ASN
419
n
134
ASN
119
B
ARG
420
n
135
ARG
120
B
GLU
421
n
136
GLU
121
B
ILE
422
n
137
ILE
122
B
VAL
423
n
138
VAL
123
B
SER
424
n
139
SER
124
B
GLY
425
n
140
GLY
125
B
MET
426
n
141
MET
126
B
LYS
427
n
142
LYS
127
B
TYR
428
n
143
TYR
128
B
ILE
429
n
144
ILE
129
B
GLN
430
n
145
GLN
130
B
HIS
431
n
146
HIS
131
B
THR
432
n
147
THR
132
B
TYR
433
n
148
TYR
133
B
ARG
434
n
149
ARG
134
B
LYS
435
n
150
LYS
135
B
GLY
436
n
151
GLY
136
B
VAL
437
n
152
VAL
137
B
ALA
438
n
153
LYS
138
B
ILE
439
n
154
ILE
139
B
ASP
440
n
155
ASP
140
B
LYS
441
n
156
LYS
141
B
THR
442
n
157
THR
142
B
ASP
443
n
158
ASP
143
B
TYR
444
n
159
TYR
144
B
MET
445
n
160
MET
145
B
VAL
446
n
161
VAL
146
B
GLY
447
n
162
GLY
147
B
SER
448
n
163
SER
148
B
TYR
449
n
164
TYR
149
B
GLY
450
n
165
GLY
150
B
PRO
451
n
166
PRO
151
B
ARG
452
n
167
ARG
152
B
ALA
453
n
168
ALA
153
B
GLU
454
n
169
GLU
154
B
GLU
455
n
170
GLU
155
B
TYR
456
n
171
TYR
156
B
GLU
457
n
172
GLU
157
B
PHE
458
n
173
PHE
158
B
LEU
459
n
174
LEU
159
B
THR
460
n
175
THR
160
B
PRO
461
n
176
PRO
161
B
MET
462
n
177
MET
162
B
GLU
463
n
178
GLU
163
B
GLU
464
n
179
GLU
164
B
ALA
465
n
180
ALA
165
B
PRO
466
n
181
PRO
166
B
LYS
467
n
182
LYS
167
B
GLY
468
n
183
GLY
168
B
MET
469
n
184
MET
169
B
LEU
470
n
185
LEU
170
B
ALA
471
n
186
ALA
171
B
ARG
472
n
187
ARG
172
B
GLY
473
n
188
GLY
173
B
SER
474
n
189
SER
174
B
TYR
475
n
190
TYR
175
B
ASN
476
n
191
ASN
176
B
ILE
477
n
192
ILE
177
B
LYS
478
n
193
LYS
178
B
SER
479
n
194
SER
179
B
ARG
480
n
195
ARG
180
B
PHE
481
n
196
PHE
181
B
THR
482
n
197
THR
182
B
ASP
483
n
198
ASP
183
B
ASP
484
n
199
ASP
184
B
ASP
485
n
200
ASP
185
B
ARG
486
n
201
ARG
186
B
THR
487
n
202
THR
187
B
ASP
488
n
203
ASP
188
B
HIS
489
n
204
HIS
189
B
LEU
490
n
205
LEU
190
B
SER
491
n
206
SER
191
B
TRP
492
n
207
TRP
192
B
GLU
493
n
208
GLU
193
B
TRP
494
n
209
TRP
194
B
ASN
495
n
210
ASN
195
B
LEU
496
n
211
LEU
196
B
THR
497
n
212
THR
197
B
ILE
498
n
213
ILE
198
B
LYS
499
n
214
LYS
199
B
LYS
500
n
215
LYS
200
B
GLU
501
n
216
GLU
201
B
TRP
502
n
217
TRP
202
B
LYS
503
n
218
LYS
203
B
ASP
504
n
219
ASP
204
B
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
6
hexameric
5010
-29
20880
18270
-117
59490
A
HIS
0
A
ND1
HIS
3
1_555
A
MG
200
D
MG
MG
1_555
A
HOH
709
G
O
HOH
1_555
87.2
A
THR
17
A
OG1
THR
20
1_555
A
MG
199
C
MG
MG
1_555
A
THR
35
A
O
THR
38
1_555
84.4
A
THR
17
A
OG1
THR
20
1_555
A
MG
199
C
MG
MG
1_555
A
HOH
749
G
O
HOH
1_555
71.6
A
THR
35
A
O
THR
38
1_555
A
MG
199
C
MG
MG
1_555
A
HOH
749
G
O
HOH
1_555
66.7
A
THR
17
A
OG1
THR
20
1_555
A
MG
199
C
MG
MG
1_555
A
GDP
198
E
O2B
GDP
1_555
74.0
A
THR
35
A
O
THR
38
1_555
A
MG
199
C
MG
MG
1_555
A
GDP
198
E
O2B
GDP
1_555
125.2
A
HOH
749
G
O
HOH
1_555
A
MG
199
C
MG
MG
1_555
A
GDP
198
E
O2B
GDP
1_555
58.8
A
THR
17
A
OG1
THR
20
1_555
A
MG
199
C
MG
MG
1_555
A
HOH
701
G
O
HOH
1_555
136.8
A
THR
35
A
O
THR
38
1_555
A
MG
199
C
MG
MG
1_555
A
HOH
701
G
O
HOH
1_555
73.2
A
HOH
749
G
O
HOH
1_555
A
MG
199
C
MG
MG
1_555
A
HOH
701
G
O
HOH
1_555
65.8
A
GDP
198
E
O2B
GDP
1_555
A
MG
199
C
MG
MG
1_555
A
HOH
701
G
O
HOH
1_555
89.2
A
CMT
188
O-METHYLCYSTEINE
A
CMT
191
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_645
-y+1,x-y-1,z
crystal symmetry operation
125.9100000000
-72.6941723937
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_765
-x+y+2,-x+1,z
crystal symmetry operation
125.9100000000
72.6941723937
0.0000000000
A
O
ILE
46
A
O
ILE
49
A
N
GLU
49
A
N
GLU
52
A
N
THR
52
A
N
THR
55
A
O
GLN
2
A
O
GLN
5
A
N
VAL
7
A
N
VAL
10
A
O
VAL
77
A
O
VAL
80
A
N
VAL
80
A
N
VAL
83
A
O
LEU
111
A
O
LEU
114
A
N
LEU
112
A
N
LEU
115
A
O
LYS
153
A
O
LYS
156
B
O
LEU
88
B
O
LEU
103
B
N
LEU
75
B
N
LEU
90
B
N
VAL
78
B
N
VAL
93
B
O
ARG
111
B
O
ARG
126
B
O
PHE
116
B
O
PHE
131
B
N
TYR
156
B
N
TYR
171
B
O
LEU
88
B
O
LEU
103
B
N
LEU
75
B
N
LEU
90
B
N
VAL
78
B
N
VAL
93
B
O
ARG
111
B
O
ARG
126
B
N
TYR
110
B
N
TYR
125
B
O
GLU
163
B
O
GLU
178
B
N
PHE
102
B
N
PHE
117
B
O
ASN
195
B
O
ASN
210
B
O
LEU
196
B
O
LEU
211
B
N
TYR
175
B
N
TYR
190
B
O
THR
182
B
O
THR
197
B
N
LYS
127
B
N
LYS
142
B
N
ARG
134
B
N
ARG
149
B
O
VAL
137
B
O
VAL
152
1
A
MG
200
D
MG
1
B
CG
GLU
5
B
CG
GLU
20
1
Y
1
B
CD
GLU
5
B
CD
GLU
20
1
Y
1
B
OE1
GLU
5
B
OE1
GLU
20
1
Y
1
B
OE2
GLU
5
B
OE2
GLU
20
1
Y
1
B
CG
LYS
138
B
CG
LYS
153
1
Y
1
B
CD
LYS
138
B
CD
LYS
153
1
Y
1
B
CE
LYS
138
B
CE
LYS
153
1
Y
1
B
NZ
LYS
138
B
NZ
LYS
153
1
Y
1
B
GLY
-14
B
GLY
1
1
Y
1
B
SER
-13
B
SER
2
1
Y
1
B
PRO
-12
B
PRO
3
1
Y
1
B
GLY
-11
B
GLY
4
1
Y
1
B
ILE
-10
B
ILE
5
1
Y
1
B
SER
-9
B
SER
6
1
Y
1
B
GLY
-8
B
GLY
7
1
Y
1
B
GLY
-7
B
GLY
8
1
Y
1
B
GLY
-6
B
GLY
9
1
Y
1
B
GLY
-5
B
GLY
10
1
Y
1
B
GLY
-4
B
GLY
11
1
Y
1
B
ILE
-3
B
ILE
12
1
Y
1
B
LEU
-2
B
LEU
13
1
Y
1
B
GLY
-1
B
GLY
14
1
Y
1
B
LEU
0
B
LEU
15
1
Y
1
B
MET
1
B
MET
16
1
Y
1
B
ALA
2
B
ALA
17
1
Y
1
B
GLU
3
B
GLU
18
1
Y
1
B
GLN
4
B
GLN
19
1
Y
1
A
TYR
154
0.068
SIDE CHAIN
1
9.44
1.50
119.30
128.74
A
A
A
C
N
CA
PRO
PRO
PRO
179
180
180
Y
1
A
ALA
13
58.18
5.56
1
A
ASN
26
79.42
-16.04
1
A
SER
30
-68.31
-70.51
1
A
GLU
31
-81.88
-78.37
1
A
VAL
85
-88.57
30.75
1
A
SER
86
-154.29
88.35
1
A
LYS
96
-92.67
-64.07
1
A
PRO
106
-44.76
-73.67
1
A
GLN
116
60.44
73.09
1
A
PRO
123
-48.76
-84.42
1
A
LEU
129
-74.75
-75.26
1
A
ASN
132
-83.73
33.84
1
A
LYS
150
70.55
35.50
1
A
LYS
153
-171.75
-177.95
1
A
GLN
162
47.07
22.37
1
A
GLU
181
76.58
90.48
1
A
PRO
182
-34.63
-76.22
1
A
LYS
184
-108.94
56.82
1
B
ALA
8
-124.06
-138.44
1
B
ALA
15
-67.73
40.17
1
B
ALA
16
-87.58
36.98
1
B
GLU
17
-145.26
-81.10
1
B
ASN
18
34.03
-135.19
1
B
GLU
20
179.43
-7.59
1
B
HIS
23
-0.53
74.58
1
B
LYS
28
100.23
103.06
1
B
ASP
42
-151.95
62.09
1
B
VAL
59
55.10
-168.36
1
B
ALA
60
72.08
86.07
1
B
SER
62
-88.55
-133.39
1
B
PRO
65
-63.97
-82.27
1
B
LEU
90
-70.82
36.72
1
B
LYS
99
-150.61
26.94
1
B
ASN
119
-106.58
-62.49
1
B
ARG
120
-104.06
-60.99
1
B
GLU
121
-104.59
-163.37
1
B
LEU
170
-123.73
-90.64
1
B
THR
182
-117.95
-157.84
PROTEIN.PARAM
PROTEIN.TOP
GDP_UPPSALA.PAR
GDP_UPPSALA.TOP
CARB.PAR
CARB.TOP
ION.PARAM
ION.TOP
WATER.PARAM
WATER.TOP
77.4
0.00
0.00
0.00
0.00
0.00
0.00
0.3200000
0.008
0.2570000
0.2570000
2.60
39.9
1563
15437
10.1
99.9
RANDOM
1370695.27
0.00
1
RESTRAINED
THROUGHOUT
0.0
FLAT MODEL
20.02
0.203
0.58
0.49
5.00
0.66
0.52
2.60
39.9
50
3201
50
0
3101
0.007
1.6
24.5
1.28
0.4610000
0.030
0.4570000
2.76
241
2344
6
9.3
99.9
refinement
CNS
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
phasing
CNS
GTP-BINDING PROTEIN/GDP-DISSOCIATION INHIBITOR 1
Structure of the rho family gtp-binding protein cdc42 in complex with the multifunctional regulator rhogdi
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
A
GLY
15
A
GLY
18
HELX_P
A
ASN
26
A
ASN
29
1
1
12
A
GLN
61
A
GLN
64
HELX_P
A
ASP
65
A
ASP
68
5
2
5
A
LEU
67
A
LEU
70
HELX_P
A
TYR
72
A
TYR
75
5
3
6
A
SER
86
A
SER
89
HELX_P
A
LYS
96
A
LYS
99
1
4
11
A
LYS
96
A
LYS
99
HELX_P
A
CYS
105
A
CYS
108
1
5
10
A
ILE
117
A
ILE
120
HELX_P
A
ASP
121
A
ASP
124
5
6
5
A
ASP
122
A
ASP
125
HELX_P
A
ALA
130
A
ALA
133
1
7
9
A
THR
138
A
THR
141
HELX_P
A
LYS
150
A
LYS
153
1
8
13
A
GLY
164
A
GLY
167
HELX_P
A
GLU
178
A
GLU
181
1
9
15
B
SER
34
B
SER
49
HELX_P
B
LEU
41
B
LEU
56
1
10
8
B
ASP
45
B
ASP
60
HELX_P
B
GLY
57
B
GLY
72
1
11
13
B
LEU
94
B
LEU
109
HELX_P
B
GLN
100
B
GLN
115
5
12
7
covale
1.818
A
CMT
188
A
SG
CMT
191
1_555
A
GER
952
F
C1
GER
1_555
covale
1.329
A
ARG
187
A
C
ARG
190
1_555
A
CMT
188
A
N
CMT
191
1_555
metalc
1.811
A
HIS
0
A
ND1
HIS
3
1_555
A
MG
200
D
MG
MG
1_555
metalc
2.126
A
THR
17
A
OG1
THR
20
1_555
A
MG
199
C
MG
MG
1_555
metalc
2.289
A
THR
35
A
O
THR
38
1_555
A
MG
199
C
MG
MG
1_555
metalc
2.063
A
MG
199
C
MG
MG
1_555
A
HOH
749
G
O
HOH
1_555
metalc
2.603
A
MG
199
C
MG
MG
1_555
A
GDP
198
E
O2B
GDP
1_555
metalc
2.893
A
MG
199
C
MG
MG
1_555
A
HOH
701
G
O
HOH
1_555
metalc
2.904
A
MG
200
D
MG
MG
1_555
A
HOH
709
G
O
HOH
1_555
CELL CYCLE
GTP-binding protein, Cdc42, RhoGDI, CELL CYCLE
CDC42_HUMAN
UNP
1
P60953
GDIR_BOVIN
UNP
2
P19803
1
188
1DOA
1
188
P60953
A
1
4
191
1
204
1DOA
1
204
P19803
B
2
16
219
1
SEE REMARK 999
GLY
-2
1DOA
A
P60953
UNP
1
1
SEE REMARK 999
SER
-1
1DOA
A
P60953
UNP
2
1
SEE REMARK 999
HIS
0
1DOA
A
P60953
UNP
3
1
CYS
MODIFIED RESIDUE
CMT
188
1DOA
A
P60953
UNP
188
191
2
SEE REMARK 999
GLY
-14
1DOA
B
P19803
UNP
1
2
SEE REMARK 999
SER
-13
1DOA
B
P19803
UNP
2
2
SEE REMARK 999
PRO
-12
1DOA
B
P19803
UNP
3
2
SEE REMARK 999
GLY
-11
1DOA
B
P19803
UNP
4
2
SEE REMARK 999
ILE
-10
1DOA
B
P19803
UNP
5
2
SEE REMARK 999
SER
-9
1DOA
B
P19803
UNP
6
2
SEE REMARK 999
GLY
-8
1DOA
B
P19803
UNP
7
2
SEE REMARK 999
GLY
-7
1DOA
B
P19803
UNP
8
2
SEE REMARK 999
GLY
-6
1DOA
B
P19803
UNP
9
2
SEE REMARK 999
GLY
-5
1DOA
B
P19803
UNP
10
2
SEE REMARK 999
GLY
-4
1DOA
B
P19803
UNP
11
2
SEE REMARK 999
ILE
-3
1DOA
B
P19803
UNP
12
2
SEE REMARK 999
LEU
-2
1DOA
B
P19803
UNP
13
2
SEE REMARK 999
GLY
-1
1DOA
B
P19803
UNP
14
2
SEE REMARK 999
LEU
0
1DOA
B
P19803
UNP
15
6
4
4
5
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
40
A
TYR
43
A
ILE
46
A
ILE
49
A
GLU
49
A
GLU
52
A
PHE
56
A
PHE
59
A
GLN
2
A
GLN
5
A
VAL
9
A
VAL
12
A
VAL
77
A
VAL
80
A
SER
83
A
SER
86
A
PHE
110
A
PHE
113
A
THR
115
A
THR
118
A
LYS
153
A
LYS
156
A
GLU
156
A
GLU
159
B
GLU
87
B
GLU
102
B
ASP
89
B
ASP
104
B
ARG
74
B
ARG
89
B
VAL
78
B
VAL
93
B
GLU
109
B
GLU
124
B
PHE
116
B
PHE
131
B
TYR
156
B
TYR
171
B
LEU
159
B
LEU
174
B
GLU
87
B
GLU
102
B
ASP
89
B
ASP
104
B
ARG
74
B
ARG
89
B
VAL
78
B
VAL
93
B
GLU
109
B
GLU
124
B
PHE
116
B
PHE
131
B
GLU
163
B
GLU
178
B
GLU
164
B
GLU
179
B
PHE
102
B
PHE
117
B
LYS
105
B
LYS
120
B
LEU
190
B
LEU
205
B
LYS
199
B
LYS
214
B
SER
174
B
SER
189
B
THR
182
B
THR
197
B
VAL
123
B
VAL
138
B
ARG
134
B
ARG
149
B
VAL
137
B
VAL
152
B
TYR
149
B
TYR
164
BINDING SITE FOR RESIDUE MG A 199
Software
6
BINDING SITE FOR RESIDUE MG A 200
Software
6
BINDING SITE FOR RESIDUE GDP A 198
Software
17
BINDING SITE FOR RESIDUE GER A 952
Software
11
A
THR
17
A
THR
20
6
1_555
A
THR
35
A
THR
38
6
1_555
A
ASP
57
A
ASP
60
6
1_555
A
GDP
198
E
GDP
6
1_555
A
HOH
701
G
HOH
6
1_555
A
HOH
749
G
HOH
6
1_555
A
HIS
0
A
HIS
3
6
3_765
A
HIS
0
A
HIS
3
6
2_645
A
HIS
0
A
HIS
3
6
1_555
A
HOH
709
G
HOH
6
3_765
A
HOH
709
G
HOH
6
1_555
A
HOH
709
G
HOH
6
2_645
A
GLY
12
A
GLY
15
17
1_555
A
ALA
13
A
ALA
16
17
1_555
A
VAL
14
A
VAL
17
17
1_555
A
GLY
15
A
GLY
18
17
1_555
A
LYS
16
A
LYS
19
17
1_555
A
THR
17
A
THR
20
17
1_555
A
CYS
18
A
CYS
21
17
1_555
A
PHE
28
A
PHE
31
17
1_555
A
VAL
33
A
VAL
36
17
1_555
A
GLN
116
A
GLN
119
17
1_555
A
ASP
118
A
ASP
121
17
1_555
A
SER
158
A
SER
161
17
1_555
A
ALA
159
A
ALA
162
17
1_555
A
LEU
160
A
LEU
163
17
1_555
A
MG
199
C
MG
17
1_555
A
HOH
701
G
HOH
17
1_555
A
HOH
749
G
HOH
17
1_555
A
ARG
186
A
ARG
189
11
1_555
A
CMT
188
A
CMT
191
11
1_555
B
ILE
14
B
ILE
29
11
1_555
B
LEU
75
B
LEU
90
11
1_555
B
TYR
110
B
TYR
125
11
1_555
B
GLN
130
B
GLN
145
11
1_555
B
THR
132
B
THR
147
11
1_555
B
ASP
140
B
ASP
155
11
1_555
B
ALA
171
B
ALA
186
11
1_555
B
TRP
194
B
TRP
209
11
1_555
B
LEU
196
B
LEU
211
11
1_555
146
H 3