0.015878 0.000000 0.000000 0.000000 0.008509 0.000000 0.000000 0.000000 0.020838 0.00000 0.00000 0.00000 Recacha, R. Costanzo, M.J. Maryanoff, B.E. Carson, M. DeLucas, L. Chattopadhyay, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 62.982 117.521 47.989 C29 H35 N7 O5 S 593.697 N-methyl-D-phenylalanyl-N-{(1S)-4-carbamimidamido-1-[(6-carboxy-1,3-benzothiazol-2-yl)carbonyl]butyl}-L-prolinamide RWJ-51438 peptide-like C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H11 N O6 S 261.252 n O-SULFO-L-TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 R C N 3 N C N 4 N O N 5 N C Y 6 N C Y 7 N C Y 8 N C Y 9 N C Y 10 N C Y 11 N C N 12 N C N 13 N N N 14 S C N 15 N C N 16 N O N 17 N C N 18 N C N 19 N C N 20 N N N 21 S C N 22 N C N 23 N C N 24 N C N 25 N N N 26 N C N 27 N N N 28 N N Y 29 N N Y 30 N S Y 31 N C Y 32 N C Y 33 N C Y 34 N C Y 35 N C Y 36 N C Y 37 N C N 38 N C N 39 N O N 40 N O N 41 N O N 42 N C N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N N N 92 S C N 93 N C N 94 N O N 95 N C N 96 N C N 97 N C N 98 N N N 99 N C N 100 N N N 101 N N N 102 N O N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N N N 119 S C N 120 N C N 121 N O N 122 N C N 123 N C N 124 N O N 125 N N N 126 N O N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N N N 136 S C N 137 N C N 138 N O N 139 N C N 140 N C N 141 N O N 142 N O N 143 N O N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N N N 152 R C N 153 N C N 154 N O N 155 N C N 156 N S N 157 N O N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N N N 166 S C N 167 N C N 168 N O N 169 N C N 170 N C N 171 N C N 172 N O N 173 N N N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N N N 186 S C N 187 N C N 188 N O N 189 N C N 190 N C N 191 N C N 192 N O N 193 N O N 194 N O N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N N N 205 N C N 206 N C N 207 N O N 208 N O N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N N N 215 S C N 216 N C N 217 N O N 218 N C Y 219 N C Y 220 N N Y 221 N C Y 222 N C Y 223 N N N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N O N 236 N H N 237 N H N 238 N N N 239 S C N 240 N C N 241 N O N 242 S C N 243 N C N 244 N C N 245 N C N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N N N 261 S C N 262 N C N 263 N O N 264 N C N 265 N C N 266 N C N 267 N C N 268 N O N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N N N 283 S C N 284 N C N 285 N O N 286 N C N 287 N C N 288 N C N 289 N C N 290 N N N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N C N 313 N S N 314 N C N 315 N O N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N NA N 328 R C N 329 R C N 330 R C N 331 S C N 332 R C N 333 N C N 334 N C N 335 N C N 336 N N N 337 N O N 338 N O N 339 N O N 340 N O N 341 N O N 342 N O N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N C Y 368 N C N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C N 386 N C N 387 N C N 388 N O N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N N N 399 S C N 400 N C N 401 N O N 402 N C N 403 N O N 404 N O N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N N N 413 S C N 414 N C N 415 N O N 416 R C N 417 N O N 418 N C N 419 N O N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N N N 430 S C N 431 N C N 432 N O N 433 N C Y 434 N C Y 435 N C Y 436 N C Y 437 N N Y 438 N C Y 439 N C Y 440 N C Y 441 N C Y 442 N C N 443 N O N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N N N 457 S C N 458 N C N 459 N O N 460 N C Y 461 N C Y 462 N C Y 463 N C Y 464 N C Y 465 N C Y 466 N C N 467 N O N 468 N O N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N N N 481 S C N 482 N C Y 483 N C Y 484 N C Y 485 N C Y 486 N C Y 487 N C Y 488 N C N 489 N O N 490 N S N 491 N O N 492 N O N 493 N O N 494 N C N 495 N O N 496 N O N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N N N 509 S C N 510 N C N 511 N O N 512 N C N 513 N C N 514 N C N 515 N O N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N doub N 11 N sing N 12 N sing N 13 N sing Y 14 N doub Y 15 N sing Y 16 N sing N 17 N sing Y 18 N doub N 19 N sing Y 20 N sing N 21 N sing Y 22 N doub N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N doub N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N doub N 56 N sing N 57 N sing N 58 N sing N 59 N sing Y 60 N doub Y 61 N sing Y 62 N sing Y 63 N sing N 64 N sing Y 65 N doub Y 66 N sing Y 67 N sing Y 68 N doub N 69 N sing Y 70 N sing N 71 N sing Y 72 N doub N 73 N sing N 74 N sing N 75 N doub N 76 N sing N 77 N sing N 78 N doub N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N doub N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N doub N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N doub N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N doub N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N doub N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing Y 220 N sing Y 221 N doub Y 222 N doub N 223 N sing Y 224 N sing N 225 N sing Y 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N doub N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N doub N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing Y 358 N doub Y 359 N sing Y 360 N sing N 361 N sing Y 362 N doub N 363 N sing Y 364 N doub N 365 N sing Y 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N doub N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N doub N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N doub N 423 N sing N 424 N sing N 425 N sing N 426 N sing Y 427 N doub Y 428 N sing Y 429 N sing N 430 N sing Y 431 N doub Y 432 N sing Y 433 N sing N 434 N sing Y 435 N sing Y 436 N doub N 437 N sing Y 438 N doub N 439 N sing Y 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N doub N 451 N sing N 452 N sing N 453 N sing N 454 N sing Y 455 N doub Y 456 N sing Y 457 N sing N 458 N sing Y 459 N doub N 460 N sing Y 461 N doub N 462 N sing Y 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing Y 477 N doub Y 478 N sing Y 479 N sing N 480 N sing Y 481 N doub N 482 N sing Y 483 N doub N 484 N sing Y 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N doub N 491 N sing N 492 N sing N 493 N doub N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N doub N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 56 1395 1400 10.1107/S0907444900010763 11053836 Structure of human alpha-thrombin complexed with RWJ-51438 at 1.7 A: unusual perturbation of the 60A-60I insertion loop. 2000 US Biochemistry BICHAW 0033 0006-2960 31 11689 11697 Structure of the Hirulog 3-Thrombin Complex and Nature of the S' Subsites of Substrates and Inhibitors 1992 US Biophys.J. BIOJAU 0030 0006-3495 71 2830 2839 Crystal Structure of Thrombin with Thiazole-Containing Inhibitors: Probes of the S1' Binding Site 1996 US Protein Sci. PRCIEI 0795 0961-8368 1 426 471 The Refined 1.9-A X-ray Crystal Structure of D-Pro-Phe-Arg Chloromethylketone-Inhibited Human Alpha-Thrombin: Structure Analysis, Overall Structure, Electrostatic Properties, Detailed Active-Site Geometry, and Structure-Function Relationships 1992 10.2210/pdb1doj/pdb pdb_00001doj NAG A 250 HAS WRONG CHIRALITY AT ATOM C2 NAG A 250 HAS WRONG CHIRALITY AT ATOM C3 NAG A 250 HAS WRONG CHIRALITY AT ATOM C4 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1998-03-04 RIGAKU SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 33858.730 ALPHA-THROMBIN 3.4.21.5 1 nat polymer 1491.528 HIRUGEN FRAGMENT OF HIRUDIN 1 syn polymer RWJ-51438 IS JOINED COVALENTLY TO SER195 OF HUMAN ALPHA-THROMBIN RWJ-51438 was chemically synthesized 593.697 N-methyl-D-phenylalanyl-N-{(1S)-4-carbamimidamido-1-[(6-carboxy-1,3-benzothiazol-2-yl)carbonyl]butyl}-L-prolinamide 1 syn non-polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 1 man non-polymer 22.990 SODIUM ION 2 syn non-polymer 18.015 water 349 nat water no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHC LLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRE TAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGD SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHC LLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRE TAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGD SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE A polypeptide(L) no yes DFEEIPEE(TYS)LQ DFEEIPEEYLQ B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample PLASMA 9606 Homo sapiens 1 2.47 50.21 VAPOR DIFFUSION, HANGING DROP 6.5 0.75 sodium acetate, 0.01% (w/v), 20% polyethylene glycol 4000 (w/v), pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295.0K 295.0 chem_comp database_PDB_caveat entity pdbx_chem_comp_identifier pdbx_entity_nonpoly pdbx_struct_conn_angle struct_conn struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 entity pdbx_entity_src_syn repository Initial release Carbohydrate remediation repository Remediation Version format compliance Atomic model Database references Derived calculations Non-polymer description Structure summary Version format compliance Other Advisory Data collection Derived calculations Structure summary Data collection Database references Source and taxonomy Structure summary 1 0 2000-11-03 1 1 2008-04-27 1 2 2011-07-13 1 3 2012-12-12 1 4 2020-07-29 1 5 2024-03-13 _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession _entity.details DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc contains the same protein complexed with D-PHE-PRO-ARG chloromethylketone (PPACK) RCSB Y RCSB 1999-12-21 REL REL 1Z0 N-methyl-D-phenylalanyl-N-{(1S)-4-carbamimidamido-1-[(6-carboxy-1,3-benzothiazol-2-yl)carbonyl]butyl}-L-prolinamide NAG 2-acetamido-2-deoxy-beta-D-glucopyranose NA SODIUM ION HOH water Hirugen, comes from hirudin sample Thrombin inhibitor RWJ-51438 Peptide-like MEA 401 3 1Z0 1Z0 401 A NAG 250 4 NAG NAG 250 A NA 600 5 NA NA 300 A NA 601 5 NA NA 301 A HOH 501 6 HOH HOH 501 A HOH 502 6 HOH HOH 502 A HOH 503 6 HOH HOH 503 A HOH 504 6 HOH HOH 504 A HOH 506 6 HOH HOH 506 A HOH 507 6 HOH HOH 507 A HOH 508 6 HOH HOH 508 A HOH 509 6 HOH HOH 509 A HOH 510 6 HOH HOH 510 A HOH 511 6 HOH HOH 511 A HOH 512 6 HOH HOH 512 A HOH 513 6 HOH HOH 513 A HOH 514 6 HOH HOH 514 A HOH 515 6 HOH HOH 515 A HOH 516 6 HOH HOH 516 A HOH 518 6 HOH HOH 518 A HOH 523 6 HOH HOH 523 A HOH 524 6 HOH HOH 524 A HOH 525 6 HOH HOH 525 A HOH 526 6 HOH HOH 526 A HOH 527 6 HOH HOH 527 A HOH 528 6 HOH HOH 528 A HOH 529 6 HOH HOH 529 A HOH 530 6 HOH HOH 530 A HOH 531 6 HOH HOH 531 A HOH 532 6 HOH HOH 532 A HOH 533 6 HOH HOH 533 A HOH 534 6 HOH HOH 534 A HOH 535 6 HOH HOH 535 A HOH 536 6 HOH HOH 536 A HOH 537 6 HOH HOH 537 A HOH 538 6 HOH HOH 538 A HOH 539 6 HOH HOH 539 A HOH 540 6 HOH HOH 540 A HOH 541 6 HOH HOH 541 A HOH 542 6 HOH HOH 542 A HOH 543 6 HOH HOH 543 A HOH 544 6 HOH HOH 544 A HOH 545 6 HOH HOH 545 A HOH 546 6 HOH HOH 546 A HOH 547 6 HOH HOH 547 A HOH 548 6 HOH HOH 548 A HOH 549 6 HOH HOH 549 A HOH 550 6 HOH HOH 550 A HOH 551 6 HOH HOH 551 A HOH 552 6 HOH HOH 552 A HOH 553 6 HOH HOH 553 A HOH 554 6 HOH HOH 554 A HOH 555 6 HOH HOH 555 A HOH 556 6 HOH HOH 556 A HOH 561 6 HOH HOH 561 A HOH 562 6 HOH HOH 562 A HOH 563 6 HOH HOH 563 A HOH 564 6 HOH HOH 564 A HOH 565 6 HOH HOH 565 A HOH 566 6 HOH HOH 566 A HOH 568 6 HOH HOH 568 A HOH 571 6 HOH HOH 571 A HOH 572 6 HOH HOH 572 A HOH 573 6 HOH HOH 573 A HOH 574 6 HOH HOH 574 A HOH 576 6 HOH HOH 576 A HOH 577 6 HOH HOH 577 A HOH 579 6 HOH HOH 579 A HOH 580 6 HOH HOH 580 A HOH 581 6 HOH HOH 581 A HOH 582 6 HOH HOH 582 A HOH 583 6 HOH HOH 583 A HOH 584 6 HOH HOH 584 A HOH 585 6 HOH HOH 585 A HOH 586 6 HOH HOH 586 A HOH 587 6 HOH HOH 587 A HOH 588 6 HOH HOH 588 A HOH 589 6 HOH HOH 589 A HOH 590 6 HOH HOH 590 A HOH 591 6 HOH HOH 591 A HOH 592 6 HOH HOH 592 A HOH 593 6 HOH HOH 593 A HOH 595 6 HOH HOH 595 A HOH 596 6 HOH HOH 596 A HOH 597 6 HOH HOH 597 A HOH 598 6 HOH HOH 598 A HOH 599 6 HOH HOH 599 A HOH 601 6 HOH HOH 601 A HOH 602 6 HOH HOH 602 A HOH 604 6 HOH HOH 604 A HOH 605 6 HOH HOH 605 A HOH 607 6 HOH HOH 607 A HOH 608 6 HOH HOH 608 A HOH 609 6 HOH HOH 609 A HOH 614 6 HOH HOH 614 A HOH 615 6 HOH HOH 615 A HOH 617 6 HOH HOH 617 A HOH 618 6 HOH HOH 618 A HOH 621 6 HOH HOH 621 A HOH 626 6 HOH HOH 626 A HOH 629 6 HOH HOH 629 A HOH 632 6 HOH HOH 632 A HOH 633 6 HOH HOH 633 A HOH 634 6 HOH HOH 634 A HOH 637 6 HOH HOH 637 A HOH 638 6 HOH HOH 638 A HOH 642 6 HOH HOH 642 A HOH 643 6 HOH HOH 643 A HOH 646 6 HOH HOH 646 A HOH 647 6 HOH HOH 647 A HOH 648 6 HOH HOH 648 A HOH 649 6 HOH HOH 649 A HOH 650 6 HOH HOH 650 A HOH 651 6 HOH HOH 651 A HOH 653 6 HOH HOH 653 A HOH 656 6 HOH HOH 656 A HOH 657 6 HOH HOH 657 A HOH 659 6 HOH HOH 659 A HOH 661 6 HOH HOH 661 A HOH 662 6 HOH HOH 662 A HOH 663 6 HOH HOH 663 A HOH 668 6 HOH HOH 668 A HOH 669 6 HOH HOH 669 A HOH 670 6 HOH HOH 670 A HOH 672 6 HOH HOH 672 A HOH 673 6 HOH HOH 673 A HOH 674 6 HOH HOH 674 A HOH 675 6 HOH HOH 675 A HOH 676 6 HOH HOH 676 A HOH 677 6 HOH HOH 677 A HOH 678 6 HOH HOH 678 A HOH 679 6 HOH HOH 679 A HOH 680 6 HOH HOH 680 A HOH 681 6 HOH HOH 681 A HOH 684 6 HOH HOH 684 A HOH 685 6 HOH HOH 685 A HOH 686 6 HOH HOH 686 A HOH 687 6 HOH HOH 687 A HOH 690 6 HOH HOH 690 A HOH 693 6 HOH HOH 693 A HOH 694 6 HOH HOH 694 A HOH 695 6 HOH HOH 695 A HOH 696 6 HOH HOH 696 A HOH 697 6 HOH HOH 697 A HOH 699 6 HOH HOH 699 A HOH 700 6 HOH HOH 700 A HOH 702 6 HOH HOH 702 A HOH 705 6 HOH HOH 705 A HOH 706 6 HOH HOH 706 A HOH 708 6 HOH HOH 708 A HOH 711 6 HOH HOH 711 A HOH 713 6 HOH HOH 713 A HOH 714 6 HOH HOH 714 A HOH 715 6 HOH HOH 715 A HOH 716 6 HOH HOH 716 A HOH 717 6 HOH HOH 717 A HOH 719 6 HOH HOH 719 A HOH 723 6 HOH HOH 723 A HOH 726 6 HOH HOH 726 A HOH 727 6 HOH HOH 727 A HOH 729 6 HOH HOH 729 A HOH 732 6 HOH HOH 732 A HOH 733 6 HOH HOH 733 A HOH 736 6 HOH HOH 736 A HOH 737 6 HOH HOH 737 A HOH 739 6 HOH HOH 739 A HOH 740 6 HOH HOH 740 A HOH 741 6 HOH HOH 741 A HOH 742 6 HOH HOH 742 A HOH 743 6 HOH HOH 743 A HOH 745 6 HOH HOH 745 A HOH 747 6 HOH HOH 747 A HOH 748 6 HOH HOH 748 A HOH 749 6 HOH HOH 749 A HOH 750 6 HOH HOH 750 A HOH 751 6 HOH HOH 751 A HOH 752 6 HOH HOH 752 A HOH 753 6 HOH HOH 753 A HOH 754 6 HOH HOH 754 A HOH 755 6 HOH HOH 755 A HOH 756 6 HOH HOH 756 A HOH 757 6 HOH HOH 757 A HOH 758 6 HOH HOH 758 A HOH 759 6 HOH HOH 759 A HOH 771 6 HOH HOH 771 A HOH 772 6 HOH HOH 772 A HOH 773 6 HOH HOH 773 A HOH 774 6 HOH HOH 774 A HOH 775 6 HOH HOH 775 A HOH 776 6 HOH HOH 776 A HOH 777 6 HOH HOH 777 A HOH 778 6 HOH HOH 778 A HOH 779 6 HOH HOH 779 A HOH 780 6 HOH HOH 780 A HOH 781 6 HOH HOH 781 A HOH 782 6 HOH HOH 782 A HOH 783 6 HOH HOH 783 A HOH 784 6 HOH HOH 784 A HOH 785 6 HOH HOH 785 A HOH 786 6 HOH HOH 786 A HOH 787 6 HOH HOH 787 A HOH 788 6 HOH HOH 788 A HOH 789 6 HOH HOH 789 A HOH 790 6 HOH HOH 790 A HOH 791 6 HOH HOH 791 A HOH 792 6 HOH HOH 792 A HOH 793 6 HOH HOH 793 A HOH 795 6 HOH HOH 795 A HOH 796 6 HOH HOH 796 A HOH 797 6 HOH HOH 797 A HOH 798 6 HOH HOH 798 A HOH 799 6 HOH HOH 799 A HOH 800 6 HOH HOH 800 A HOH 801 6 HOH HOH 801 A HOH 802 6 HOH HOH 802 A HOH 803 6 HOH HOH 803 A HOH 804 6 HOH HOH 804 A HOH 805 6 HOH HOH 805 A HOH 806 6 HOH HOH 806 A HOH 807 6 HOH HOH 807 A HOH 809 6 HOH HOH 809 A HOH 811 6 HOH HOH 811 A HOH 812 6 HOH HOH 812 A HOH 814 6 HOH HOH 814 A HOH 815 6 HOH HOH 815 A HOH 816 6 HOH HOH 816 A HOH 817 6 HOH HOH 817 A HOH 818 6 HOH HOH 818 A HOH 819 6 HOH HOH 819 A HOH 820 6 HOH HOH 820 A HOH 821 6 HOH HOH 821 A HOH 822 6 HOH HOH 822 A HOH 823 6 HOH HOH 823 A HOH 824 6 HOH HOH 824 A HOH 825 6 HOH HOH 825 A HOH 826 6 HOH HOH 826 A HOH 827 6 HOH HOH 827 A HOH 831 6 HOH HOH 831 A HOH 832 6 HOH HOH 832 A HOH 833 6 HOH HOH 833 A HOH 835 6 HOH HOH 835 A HOH 836 6 HOH HOH 836 A HOH 837 6 HOH HOH 837 A HOH 838 6 HOH HOH 838 A HOH 839 6 HOH HOH 839 A HOH 840 6 HOH HOH 840 A HOH 841 6 HOH HOH 841 A HOH 842 6 HOH HOH 842 A HOH 843 6 HOH HOH 843 A HOH 844 6 HOH HOH 844 A HOH 845 6 HOH HOH 845 A HOH 846 6 HOH HOH 846 A HOH 847 6 HOH HOH 847 A HOH 848 6 HOH HOH 848 A HOH 849 6 HOH HOH 849 A HOH 850 6 HOH HOH 850 A HOH 851 6 HOH HOH 851 A HOH 852 6 HOH HOH 852 A HOH 859 6 HOH HOH 859 A HOH 860 6 HOH HOH 860 A HOH 861 6 HOH HOH 861 A HOH 862 6 HOH HOH 862 A HOH 863 6 HOH HOH 863 A HOH 864 6 HOH HOH 864 A HOH 866 6 HOH HOH 866 A HOH 867 6 HOH HOH 867 A HOH 868 6 HOH HOH 868 A HOH 870 6 HOH HOH 870 A HOH 873 6 HOH HOH 873 A HOH 874 6 HOH HOH 874 A HOH 878 6 HOH HOH 878 A HOH 879 6 HOH HOH 879 A HOH 880 6 HOH HOH 880 A HOH 883 6 HOH HOH 883 A HOH 887 6 HOH HOH 887 A HOH 888 6 HOH HOH 888 A HOH 889 6 HOH HOH 889 A HOH 890 6 HOH HOH 890 A HOH 891 6 HOH HOH 891 A HOH 892 6 HOH HOH 892 A HOH 893 6 HOH HOH 893 A HOH 894 6 HOH HOH 894 A HOH 896 6 HOH HOH 896 A HOH 898 6 HOH HOH 898 A HOH 899 6 HOH HOH 899 A HOH 902 6 HOH HOH 902 A HOH 904 6 HOH HOH 904 A HOH 905 6 HOH HOH 905 A HOH 906 6 HOH HOH 906 A HOH 908 6 HOH HOH 908 A HOH 913 6 HOH HOH 913 A HOH 915 6 HOH HOH 915 A HOH 916 6 HOH HOH 916 A HOH 935 6 HOH HOH 935 A HOH 936 6 HOH HOH 936 A HOH 938 6 HOH HOH 938 A HOH 946 6 HOH HOH 946 A HOH 947 6 HOH HOH 947 A HOH 948 6 HOH HOH 948 A HOH 950 6 HOH HOH 950 A HOH 951 6 HOH HOH 951 A HOH 953 6 HOH HOH 953 A HOH 958 6 HOH HOH 958 A HOH 959 6 HOH HOH 959 A HOH 960 6 HOH HOH 960 A HOH 961 6 HOH HOH 961 A HOH 962 6 HOH HOH 962 A HOH 963 6 HOH HOH 963 A HOH 965 6 HOH HOH 965 A HOH 971 6 HOH HOH 971 A HOH 972 6 HOH HOH 972 A HOH 974 6 HOH HOH 974 A HOH 976 6 HOH HOH 976 A HOH 979 6 HOH HOH 979 A HOH 980 6 HOH HOH 980 A HOH 981 6 HOH HOH 981 A HOH 982 6 HOH HOH 982 A HOH 983 6 HOH HOH 983 A HOH 984 6 HOH HOH 984 A HOH 985 6 HOH HOH 985 A HOH 986 6 HOH HOH 986 A HOH 987 6 HOH HOH 987 A HOH 988 6 HOH HOH 988 A HOH 992 6 HOH HOH 992 A HOH 993 6 HOH HOH 993 A HOH 995 6 HOH HOH 995 A HOH 996 6 HOH HOH 996 A HOH 998 6 HOH HOH 998 A HOH 999 6 HOH HOH 999 A HOH 1001 6 HOH HOH 1001 A HOH 1002 6 HOH HOH 1002 A HOH 1004 6 HOH HOH 1004 A HOH 1005 6 HOH HOH 1005 A HOH 1006 6 HOH HOH 1006 A HOH 1007 6 HOH HOH 1007 A HOH 1008 6 HOH HOH 1008 A HOH 1009 6 HOH HOH 1009 A HOH 558 6 HOH HOH 558 B HOH 560 6 HOH HOH 560 B HOH 612 6 HOH HOH 612 B HOH 613 6 HOH HOH 613 B HOH 616 6 HOH HOH 616 B HOH 746 6 HOH HOH 746 B HOH 794 6 HOH HOH 794 B HOH 855 6 HOH HOH 855 B HOH 869 6 HOH HOH 869 B HOH 872 6 HOH HOH 872 B HOH 875 6 HOH HOH 875 B HOH 969 6 HOH HOH 969 B HOH 970 6 HOH HOH 970 B HOH 977 6 HOH HOH 977 B HOH 997 6 HOH HOH 997 B HOH 1003 6 HOH HOH 1003 B ALA 1 n 1 H THR 1 A ALA 1 n 2 G PHE 1 A GLY 1 n 3 F GLY 1 A SER 1 n 4 E SER 1 A GLY 1 n 5 D GLY 1 A GLU 1 n 6 C GLU 1 A ALA 1 n 7 B ALA 1 A ASP 1 n 8 A ASP 1 A CYS 1 n 9 CYS 1 A GLY 2 n 10 GLY 2 A LEU 3 n 11 LEU 3 A ARG 4 n 12 ARG 4 A PRO 5 n 13 PRO 5 A LEU 6 n 14 LEU 6 A PHE 7 n 15 PHE 7 A GLU 8 n 16 GLU 8 A LYS 9 n 17 LYS 9 A LYS 10 n 18 LYS 10 A SER 11 n 19 SER 11 A LEU 12 n 20 LEU 12 A GLU 13 n 21 GLU 13 A ASP 14 n 22 ASP 14 A LYS 14 n 23 A LYS 14 A THR 14 n 24 B THR 14 A GLU 14 n 25 C GLU 14 A ARG 14 n 26 D ARG 14 A GLU 14 n 27 E GLU 14 A LEU 14 n 28 F LEU 14 A LEU 14 n 29 G LEU 14 A GLU 14 n 30 H GLU 14 A SER 14 n 31 I SER 14 A TYR 14 n 32 J TYR 14 A ILE 14 n 33 K ILE 14 A GLY 14 n 34 M ASP 14 A n 35 L 14 A n 36 15 A ILE 16 n 37 ILE 16 A VAL 17 n 38 VAL 17 A GLU 18 n 39 GLU 18 A GLY 19 n 40 GLY 19 A SER 20 n 41 SER 20 A ASP 21 n 42 ASP 21 A ALA 22 n 43 ALA 22 A GLU 23 n 44 GLU 23 A ILE 24 n 45 ILE 24 A GLY 25 n 46 GLY 25 A MET 26 n 47 MET 26 A SER 27 n 48 SER 27 A PRO 28 n 49 PRO 28 A TRP 29 n 50 TRP 29 A GLN 30 n 51 GLN 30 A VAL 31 n 52 VAL 31 A MET 32 n 53 MET 32 A LEU 33 n 54 LEU 33 A PHE 34 n 55 PHE 34 A ARG 35 n 56 ARG 35 A LYS 36 n 57 LYS 36 A SER 36 n 58 A SER 36 A PRO 37 n 59 PRO 37 A GLN 38 n 60 GLN 38 A GLU 39 n 61 GLU 39 A LEU 40 n 62 LEU 40 A LEU 41 n 63 LEU 41 A CYS 42 n 64 CYS 42 A GLY 43 n 65 GLY 43 A ALA 44 n 66 ALA 44 A SER 45 n 67 SER 45 A LEU 46 n 68 LEU 46 A ILE 47 n 69 ILE 47 A SER 48 n 70 SER 48 A ASP 49 n 71 ASP 49 A ARG 50 n 72 ARG 50 A TRP 51 n 73 TRP 51 A VAL 52 n 74 VAL 52 A LEU 53 n 75 LEU 53 A THR 54 n 76 THR 54 A ALA 55 n 77 ALA 55 A ALA 56 n 78 ALA 56 A HIS 57 n 79 HIS 57 A CYS 58 n 80 CYS 58 A LEU 59 n 81 LEU 59 A LEU 60 n 82 LEU 60 A TYR 60 n 83 A TYR 60 A PRO 60 n 84 B PRO 60 A PRO 60 n 85 C PRO 60 A TRP 60 n 86 D TRP 60 A ASP 60 n 87 E ASP 60 A LYS 60 n 88 F LYS 60 A ASN 60 n 89 G ASN 60 A PHE 60 n 90 H PHE 60 A THR 60 n 91 I THR 60 A GLU 61 n 92 GLU 61 A ASN 62 n 93 ASN 62 A ASP 63 n 94 ASP 63 A LEU 64 n 95 LEU 64 A LEU 65 n 96 LEU 65 A VAL 66 n 97 VAL 66 A ARG 67 n 98 ARG 67 A ILE 68 n 99 ILE 68 A GLY 69 n 100 GLY 69 A LYS 70 n 101 LYS 70 A HIS 71 n 102 HIS 71 A SER 72 n 103 SER 72 A ARG 73 n 104 ARG 73 A THR 74 n 105 THR 74 A ARG 75 n 106 ARG 75 A TYR 76 n 107 TYR 76 A GLU 77 n 108 GLU 77 A ARG 77 n 109 A ARG 77 A ASN 78 n 110 ASN 78 A ILE 79 n 111 ILE 79 A GLU 80 n 112 GLU 80 A LYS 81 n 113 LYS 81 A ILE 82 n 114 ILE 82 A SER 83 n 115 SER 83 A MET 84 n 116 MET 84 A LEU 85 n 117 LEU 85 A GLU 86 n 118 GLU 86 A LYS 87 n 119 LYS 87 A ILE 88 n 120 ILE 88 A TYR 89 n 121 TYR 89 A ILE 90 n 122 ILE 90 A HIS 91 n 123 HIS 91 A PRO 92 n 124 PRO 92 A ARG 93 n 125 ARG 93 A TYR 94 n 126 TYR 94 A ASN 95 n 127 ASN 95 A TRP 96 n 128 TRP 96 A ARG 97 n 129 ARG 97 A GLU 97 n 130 A GLU 97 A ASN 98 n 131 ASN 98 A LEU 99 n 132 LEU 99 A ASP 100 n 133 ASP 100 A ARG 101 n 134 ARG 101 A ASP 102 n 135 ASP 102 A ILE 103 n 136 ILE 103 A ALA 104 n 137 ALA 104 A LEU 105 n 138 LEU 105 A MET 106 n 139 MET 106 A LYS 107 n 140 LYS 107 A LEU 108 n 141 LEU 108 A LYS 109 n 142 LYS 109 A LYS 110 n 143 LYS 110 A PRO 111 n 144 PRO 111 A VAL 112 n 145 VAL 112 A ALA 113 n 146 ALA 113 A PHE 114 n 147 PHE 114 A SER 115 n 148 SER 115 A ASP 116 n 149 ASP 116 A TYR 117 n 150 TYR 117 A ILE 118 n 151 ILE 118 A HIS 119 n 152 HIS 119 A PRO 120 n 153 PRO 120 A VAL 121 n 154 VAL 121 A CYS 122 n 155 CYS 122 A LEU 123 n 156 LEU 123 A PRO 124 n 157 PRO 124 A ASP 125 n 158 ASP 125 A ARG 126 n 159 ARG 126 A GLU 127 n 160 GLU 127 A THR 128 n 161 THR 128 A ALA 129 n 162 ALA 129 A ALA 129 n 163 A ALA 129 A SER 129 n 164 B SER 129 A LEU 130 n 165 C LEU 130 A LEU 130 n 166 LEU 130 A GLN 131 n 167 GLN 131 A ALA 132 n 168 ALA 132 A GLY 133 n 169 GLY 133 A TYR 134 n 170 TYR 134 A LYS 135 n 171 LYS 135 A GLY 136 n 172 GLY 136 A ARG 137 n 173 ARG 137 A VAL 138 n 174 VAL 138 A THR 139 n 175 THR 139 A GLY 140 n 176 GLY 140 A TRP 141 n 177 TRP 141 A GLY 142 n 178 GLY 142 A ASN 143 n 179 ASN 143 A LEU 144 n 180 LEU 144 A LYS 145 n 181 LYS 145 A GLU 146 n 182 GLU 146 A THR 147 n 183 THR 147 A TRP 148 n 184 TRP 148 A THR 149 n 185 THR 149 A ALA 149 n 186 A ALA 149 A ASN 149 n 187 B ASN 149 A VAL 149 n 188 C VAL 149 A GLY 149 n 189 D GLY 149 A LYS 149 n 190 E LYS 149 A GLY 150 n 191 GLY 150 A GLN 151 n 192 GLN 151 A PRO 152 n 193 PRO 152 A SER 153 n 194 SER 153 A VAL 154 n 195 VAL 154 A LEU 155 n 196 LEU 155 A GLN 156 n 197 GLN 156 A VAL 157 n 198 VAL 157 A VAL 158 n 199 VAL 158 A ASN 159 n 200 ASN 159 A LEU 160 n 201 LEU 160 A PRO 161 n 202 PRO 161 A ILE 162 n 203 ILE 162 A VAL 163 n 204 VAL 163 A GLU 164 n 205 GLU 164 A ARG 165 n 206 ARG 165 A PRO 166 n 207 PRO 166 A VAL 167 n 208 VAL 167 A CYS 168 n 209 CYS 168 A LYS 169 n 210 LYS 169 A ASP 170 n 211 ASP 170 A SER 171 n 212 SER 171 A THR 172 n 213 THR 172 A ARG 173 n 214 ARG 173 A ILE 174 n 215 ILE 174 A ARG 175 n 216 ARG 175 A ILE 176 n 217 ILE 176 A THR 177 n 218 THR 177 A ASP 178 n 219 ASP 178 A ASN 179 n 220 ASN 179 A MET 180 n 221 MET 180 A PHE 181 n 222 PHE 181 A CYS 182 n 223 CYS 182 A ALA 183 n 224 ALA 183 A GLY 184 n 225 GLY 184 A TYR 184 n 226 A TYR 184 A LYS 185 n 227 LYS 185 A PRO 186 n 228 PRO 186 A ASP 186 n 229 A ASP 186 A GLU 186 n 230 B GLU 186 A GLY 186 n 231 C GLY 186 A LYS 186 n 232 D LYS 186 A ARG 187 n 233 ARG 187 A GLY 188 n 234 GLY 188 A ASP 189 n 235 ASP 189 A ALA 190 n 236 ALA 190 A CYS 191 n 237 CYS 191 A GLU 192 n 238 GLU 192 A GLY 193 n 239 GLY 193 A ASP 194 n 240 ASP 194 A SER 195 n 241 SER 195 A GLY 196 n 242 GLY 196 A GLY 197 n 243 GLY 197 A PRO 198 n 244 PRO 198 A PHE 199 n 245 PHE 199 A VAL 200 n 246 VAL 200 A MET 201 n 247 MET 201 A LYS 202 n 248 LYS 202 A SER 203 n 249 SER 203 A PRO 204 n 250 PRO 204 A PHE 204 n 251 A PHE 204 A ASN 204 n 252 B ASN 204 A ASN 205 n 253 ASN 205 A ARG 206 n 254 ARG 206 A TRP 207 n 255 TRP 207 A TYR 208 n 256 TYR 208 A GLN 209 n 257 GLN 209 A MET 210 n 258 MET 210 A GLY 211 n 259 GLY 211 A ILE 212 n 260 ILE 212 A VAL 213 n 261 VAL 213 A SER 214 n 262 SER 214 A TRP 215 n 263 TRP 215 A GLY 216 n 264 GLY 216 A GLU 217 n 265 GLU 217 A GLY 219 n 266 GLY 219 A CYS 220 n 267 CYS 220 A ASP 221 n 268 ASP 221 A ARG 221 n 269 A ARG 221 A ASP 222 n 270 ASP 222 A GLY 223 n 271 GLY 223 A LYS 224 n 272 LYS 224 A TYR 225 n 273 TYR 225 A GLY 226 n 274 GLY 226 A PHE 227 n 275 PHE 227 A TYR 228 n 276 TYR 228 A THR 229 n 277 THR 229 A HIS 230 n 278 HIS 230 A VAL 231 n 279 VAL 231 A PHE 232 n 280 PHE 232 A ARG 233 n 281 ARG 233 A LEU 234 n 282 LEU 234 A LYS 235 n 283 LYS 235 A LYS 236 n 284 LYS 236 A TRP 237 n 285 TRP 237 A ILE 238 n 286 ILE 238 A GLN 239 n 287 GLN 239 A LYS 240 n 288 LYS 240 A VAL 241 n 289 VAL 241 A ILE 242 n 290 ILE 242 A ASP 243 n 291 ASP 243 A GLN 244 n 292 GLN 244 A PHE 245 n 293 PHE 245 A GLY 246 n 294 GLY 246 A ALA 247 n 295 GLU 247 A ASP 355 n 1 ASP 355 B PHE 356 n 2 PHE 356 B GLU 357 n 3 GLU 357 B GLU 358 n 4 GLU 358 B ILE 359 n 5 ILE 359 B PRO 360 n 6 PRO 360 B GLU 361 n 7 GLU 361 B GLU 362 n 8 GLU 362 B TYR 363 n 9 TYS 363 B LEU 364 n 10 LEU 364 B GLN 365 n 11 GLN 365 B author_defined_assembly 2 dimeric A LYS 169 A O LYS 210 1_555 A NA 301 F NA NA 1_555 A THR 172 A O THR 213 1_555 63.8 A LYS 169 A O LYS 210 1_555 A NA 301 F NA NA 1_555 A ILE 174 A O ILE 215 1_555 143.0 A THR 172 A O THR 213 1_555 A NA 301 F NA NA 1_555 A ILE 174 A O ILE 215 1_555 91.4 A LYS 169 A O LYS 210 1_555 A NA 301 F NA NA 1_555 A HOH 684 G O HOH 1_555 121.6 A THR 172 A O THR 213 1_555 A NA 301 F NA NA 1_555 A HOH 684 G O HOH 1_555 164.7 A ILE 174 A O ILE 215 1_555 A NA 301 F NA NA 1_555 A HOH 684 G O HOH 1_555 89.8 A A ARG 221 A O ARG 269 1_555 A NA 300 E NA NA 1_555 A LYS 224 A O LYS 272 1_555 90.4 A A ARG 221 A O ARG 269 1_555 A NA 300 E NA NA 1_555 A HOH 531 G O HOH 1_555 157.7 A LYS 224 A O LYS 272 1_555 A NA 300 E NA NA 1_555 A HOH 531 G O HOH 1_555 68.3 A A ARG 221 A O ARG 269 1_555 A NA 300 E NA NA 1_555 A HOH 595 G O HOH 1_555 90.0 A LYS 224 A O LYS 272 1_555 A NA 300 E NA NA 1_555 A HOH 595 G O HOH 1_555 93.4 A HOH 531 G O HOH 1_555 A NA 300 E NA NA 1_555 A HOH 595 G O HOH 1_555 85.2 A A ARG 221 A O ARG 269 1_555 A NA 300 E NA NA 1_555 A HOH 713 G O HOH 1_555 95.1 A LYS 224 A O LYS 272 1_555 A NA 300 E NA NA 1_555 A HOH 713 G O HOH 1_555 81.3 A HOH 531 G O HOH 1_555 A NA 300 E NA NA 1_555 A HOH 713 G O HOH 1_555 88.2 A HOH 595 G O HOH 1_555 A NA 300 E NA NA 1_555 A HOH 713 G O HOH 1_555 172.7 A A ARG 221 A O ARG 269 1_555 A NA 300 E NA NA 1_555 A HOH 714 G O HOH 1_555 110.8 A LYS 224 A O LYS 272 1_555 A NA 300 E NA NA 1_555 A HOH 714 G O HOH 1_555 158.8 A HOH 531 G O HOH 1_555 A NA 300 E NA NA 1_555 A HOH 714 G O HOH 1_555 90.8 A HOH 595 G O HOH 1_555 A NA 300 E NA NA 1_555 A HOH 714 G O HOH 1_555 88.3 A HOH 713 G O HOH 1_555 A NA 300 E NA NA 1_555 A HOH 714 G O HOH 1_555 94.8 G A ASN 60 GLYCOSYLATION SITE A ASN 89 ASN B TYS 363 O-SULFO-L-TYROSINE B TYS 9 TYR 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O SER 20 A O SER 41 A N VAL 157 A N VAL 198 A O LEU 160 A O LEU 201 A N GLY 136 A N GLY 172 A N THR 139 A N THR 175 A O PRO 198 A O PRO 244 A O MET 201 A O MET 247 A N TYR 208 A N TYR 256 A O TRP 215 A O TRP 263 A N PHE 227 A N PHE 275 A N TYR 228 A N TYR 276 A O PHE 181 A O PHE 222 A N ARG 35 A N ARG 56 A O GLU 39 A O GLU 61 A O SER 45 A O SER 67 A N LEU 53 A N LEU 75 A O THR 54 A O THR 76 A N ALA 104 A N ALA 137 A O LYS 107 A O LYS 140 A N GLU 86 A N GLU 118 A N LEU 85 A N LEU 117 A O LEU 64 A O LEU 95 A N ARG 67 A N ARG 98 A O MET 32 A O MET 53 H 1 A OG1 THR 1 A OG1 THR 1 1 Y H 1 A CG2 THR 1 A CG2 THR 1 1 Y G 1 A CG PHE 1 A CG PHE 2 1 Y G 1 A CD1 PHE 1 A CD1 PHE 2 1 Y G 1 A CD2 PHE 1 A CD2 PHE 2 1 Y G 1 A CE1 PHE 1 A CE1 PHE 2 1 Y G 1 A CE2 PHE 1 A CE2 PHE 2 1 Y G 1 A CZ PHE 1 A CZ PHE 2 1 Y M 1 A CB ASP 14 A CB ASP 34 1 Y M 1 A CG ASP 14 A CG ASP 34 1 Y M 1 A OD1 ASP 14 A OD1 ASP 34 1 Y M 1 A OD2 ASP 14 A OD2 ASP 34 1 Y 1 A CG GLU 247 A CG GLU 295 1 Y 1 A CD GLU 247 A CD GLU 295 1 Y 1 A OE1 GLU 247 A OE1 GLU 295 1 Y 1 A OE2 GLU 247 A OE2 GLU 295 1 Y L 1 A GLY 14 A GLY 35 1 Y 1 A ARG 15 A ARG 36 1 Y 1 A C2 NAG 250 PLANAR 1 A C3 NAG 250 PLANAR 1 A C4 NAG 250 PLANAR G 1 A PHE 1 -144.81 -15.98 1 A PHE 7 -132.94 -86.97 G 1 A ASN 60 -163.05 84.37 1 A HIS 71 -130.71 -57.54 1 A ILE 79 -120.15 -57.99 A 1 A GLU 97 -107.42 -69.60 1 A SER 214 -109.61 -69.79 PROTEIN_REP.PARAM TOPHCSDX.PRO INH3.PARAM TOPH19.SOL ION.PARAM INH2.TOP NAG.PARAM NAG.TOP SULF.TOP 19.5 1.02 0.00 0.00 -1.45 0.00 0.43 The Bijvoet differences were used in phasing 0.217 0.004 0.174 0.174 1.70 8.00 3322 39616 33357 10.0 84.2 RANDOM 1520225.35 0.00 1 RESTRAINED THROUGHOUT 3.0 0 FLAT MODEL 93.48 0.490 0.21 0.18 5.00 0.16 0.13 1.70 8.00 349 2859 58 0 2452 0.01 1.4 26.3 0.61 1.40 1.50 2.06 2.00 2.42 2.00 3.48 2.50 0.298 0.016 0.276 1.81 3670 3311 6 10.0 56.4 16.2 1.66 99.0 1DOJ 126549 126549 0 0 0.04 1 16.3 5 87.1 0.2 1.66 1 3 87.1 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement X-PLOR 3.851 Crystal structure of human alpha-thrombin*RWJ-51438 complex at 1.7 A 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N 6 N N 6 N N A PHE 7 A PHE 15 HELX_P A SER 11 A SER 19 5 1 5 A ALA 55 A ALA 77 HELX_P A LEU 59 A LEU 81 1 3 5 A ASP 125 A ASP 158 HELX_P A LEU 130 A LEU 166 1 5 9 A GLU 164 A GLU 205 HELX_P A SER 171 A SER 212 1 6 8 A VAL 231 A VAL 279 HELX_P A PHE 245 A PHE 293 1 8 15 disulf 2.032 A CYS 1 A SG CYS 9 1_555 A CYS 122 A SG CYS 155 1_555 disulf 2.027 A CYS 42 A SG CYS 64 1_555 A CYS 58 A SG CYS 80 1_555 disulf 2.027 A CYS 168 A SG CYS 209 1_555 A CYS 182 A SG CYS 223 1_555 disulf 2.032 A CYS 191 A SG CYS 237 1_555 A CYS 220 A SG CYS 267 1_555 covale 1.460 one G N-Glycosylation A ASN 60 A ND2 ASN 89 1_555 A NAG 250 D C1 NAG 1_555 covale 1.419 none A SER 195 A OG SER 241 1_555 A 1Z0 401 C C4 1Z0 1_555 covale 1.329 both B GLU 362 B C GLU 8 1_555 B TYS 363 B N TYS 9 1_555 covale 1.328 both B TYS 363 B C TYS 9 1_555 B LEU 364 B N LEU 10 1_555 metalc 2.812 A LYS 169 A O LYS 210 1_555 A NA 301 F NA NA 1_555 metalc 2.740 A THR 172 A O THR 213 1_555 A NA 301 F NA NA 1_555 metalc 2.728 A ILE 174 A O ILE 215 1_555 A NA 301 F NA NA 1_555 metalc 2.397 A A ARG 221 A O ARG 269 1_555 A NA 300 E NA NA 1_555 metalc 2.468 A LYS 224 A O LYS 272 1_555 A NA 300 E NA NA 1_555 metalc 2.634 A NA 300 E NA NA 1_555 A HOH 531 G O HOH 1_555 metalc 2.606 A NA 300 E NA NA 1_555 A HOH 595 G O HOH 1_555 metalc 2.470 A NA 300 E NA NA 1_555 A HOH 713 G O HOH 1_555 metalc 2.508 A NA 300 E NA NA 1_555 A HOH 714 G O HOH 1_555 metalc 2.882 A NA 301 F NA NA 1_555 A HOH 684 G O HOH 1_555 HYDROLASE/HYDROLASE INHIBITOR thrombin, serine protease, enzyme inhibition, HYDROLASE-HYDROLASE INHIBITOR COMPLEX A SER 36 A SER 58 A 1 A PRO 37 A PRO 59 -0.07 THRB_HUMAN UNP 1 P00734 HIRV2_HIRME UNP 2 P09945 328 622 1DOJ 1 247 P00734 H A 1 1 295 62 72 1DOJ 355 365 P09945 B 2 1 11 7 7 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 20 A SER 41 A ASP 21 A ASP 42 A GLN 156 A GLN 197 A PRO 161 A PRO 202 A LYS 135 A LYS 171 A GLY 140 A GLY 176 A PRO 198 A PRO 244 A LYS 202 A LYS 248 A TRP 207 A TRP 255 A TRP 215 A TRP 263 A GLY 226 A GLY 274 A HIS 230 A HIS 278 A MET 180 A MET 221 A ALA 183 A ALA 224 A GLN 30 A GLN 51 A ARG 35 A ARG 56 A GLU 39 A GLU 61 A LEU 46 A LEU 68 A TRP 51 A TRP 73 A THR 54 A THR 76 A ALA 104 A ALA 137 A LEU 108 A LEU 141 A LYS 81 A LYS 113 A ILE 90 A ILE 122 A LEU 64 A LEU 95 A ILE 68 A ILE 99 A GLN 30 A GLN 51 A ARG 35 A ARG 56 18 P 21 21 2