0.019708 0.000000 0.000000 0.000000 0.019708 0.000000 0.000000 0.000000 0.009289 0.00000 0.00000 0.00000 Lubkowski, J. Bujacz, G. Boque, L. Wlodawer, A. Domaille, P.J. Handel, T.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 50.740 50.740 107.650 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Nat.Struct.Biol. NSBIEW 2024 1072-8368 4 64 69 10.1038/nsb0197-64 8989326 The structure of MCP-1 in two crystal forms provides a rare example of variable quaternary interactions. 1997 US Biochemistry BICHAW 0033 0006-2960 35 6569 Heteronuclear (1H, 13C, 15N) NMR Assignments and Solution Structure of the Monocyte Chemoattractant Protein-1 (Mcp-1) Dimer 1996 10.2210/pdb1dok/pdb pdb_00001dok 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298 1 COLLIMATOR IMAGE PLATE 1995-11-05 RIGAKU GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 8830.239 MONOCYTE CHEMOATTRACTANT PROTEIN 1 N-TERMINAL METHIONINE NOT REMOVED POST-TRANSLATIONALLY 2 man polymer 96.063 SULFATE ION 2 syn non-polymer 18.015 water 116 nat water MCP-1, MCAF no no MQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPKT MQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQTPKT A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli BL21 1 2.04 32. INITIAL MODEL FOR MOLECULAR REPLACEMENT WAS MODIFIED AS DESCRIBED IN JOURNAL ARTICLE. VAPOR DIFFUSION, HANGING DROP 8.0 10 MG/ML PROTEIN IN 50 MM TRIS BUFFER PH 7.5-8 EQUILIBRATED AGAINST 50-55% AMMONIUM SULFATE USING HANGING DROP VAPOR DIFFUSION METHOD., pH 8.0, vapor diffusion - hanging drop 7.5-8.0 database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Version format compliance Database references Derived calculations Refinement description 1 0 1997-03-12 1 1 2008-03-24 1 2 2011-07-13 1 3 2023-08-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1996-11-27 REL SO4 SULFATE ION HOH water RESIDUE MET 0 IS AN ARTIFACT OF EXPRESSION. 1DOM PDB ENTRY 1DOM PDB experimental model SO4 402 2 SO4 SO4 402 A SO4 401 2 SO4 SO4 401 B HOH 201 3 HOH HOH 201 A HOH 204 3 HOH HOH 204 A HOH 205 3 HOH HOH 205 A HOH 207 3 HOH HOH 207 A HOH 209 3 HOH HOH 209 A HOH 210 3 HOH HOH 210 A HOH 211 3 HOH HOH 211 A HOH 212 3 HOH HOH 212 A HOH 213 3 HOH HOH 213 A HOH 214 3 HOH HOH 214 A HOH 215 3 HOH HOH 215 A HOH 216 3 HOH HOH 216 A HOH 217 3 HOH HOH 217 A HOH 218 3 HOH HOH 218 A HOH 221 3 HOH HOH 221 A HOH 242 3 HOH HOH 242 A HOH 244 3 HOH HOH 244 A HOH 246 3 HOH HOH 246 A HOH 247 3 HOH HOH 247 A HOH 248 3 HOH HOH 248 A HOH 249 3 HOH HOH 249 A HOH 250 3 HOH HOH 250 A HOH 251 3 HOH HOH 251 A HOH 252 3 HOH HOH 252 A HOH 253 3 HOH HOH 253 A HOH 254 3 HOH HOH 254 A HOH 255 3 HOH HOH 255 A HOH 256 3 HOH HOH 256 A HOH 257 3 HOH HOH 257 A HOH 270 3 HOH HOH 270 A HOH 271 3 HOH HOH 271 A HOH 272 3 HOH HOH 272 A HOH 273 3 HOH HOH 273 A HOH 274 3 HOH HOH 274 A HOH 275 3 HOH HOH 275 A HOH 276 3 HOH HOH 276 A HOH 277 3 HOH HOH 277 A HOH 278 3 HOH HOH 278 A HOH 279 3 HOH HOH 279 A HOH 284 3 HOH HOH 284 A HOH 285 3 HOH HOH 285 A HOH 286 3 HOH HOH 286 A HOH 295 3 HOH HOH 295 A HOH 296 3 HOH HOH 296 A HOH 300 3 HOH HOH 300 A HOH 304 3 HOH HOH 304 A HOH 306 3 HOH HOH 306 A HOH 307 3 HOH HOH 307 A HOH 308 3 HOH HOH 308 A HOH 309 3 HOH HOH 309 A HOH 313 3 HOH HOH 313 A HOH 316 3 HOH HOH 316 A HOH 202 3 HOH HOH 202 B HOH 203 3 HOH HOH 203 B HOH 206 3 HOH HOH 206 B HOH 208 3 HOH HOH 208 B HOH 219 3 HOH HOH 219 B HOH 220 3 HOH HOH 220 B HOH 222 3 HOH HOH 222 B HOH 223 3 HOH HOH 223 B HOH 224 3 HOH HOH 224 B HOH 225 3 HOH HOH 225 B HOH 226 3 HOH HOH 226 B HOH 227 3 HOH HOH 227 B HOH 228 3 HOH HOH 228 B HOH 229 3 HOH HOH 229 B HOH 230 3 HOH HOH 230 B HOH 231 3 HOH HOH 231 B HOH 232 3 HOH HOH 232 B HOH 233 3 HOH HOH 233 B HOH 234 3 HOH HOH 234 B HOH 235 3 HOH HOH 235 B HOH 236 3 HOH HOH 236 B HOH 237 3 HOH HOH 237 B HOH 238 3 HOH HOH 238 B HOH 239 3 HOH HOH 239 B HOH 240 3 HOH HOH 240 B HOH 241 3 HOH HOH 241 B HOH 243 3 HOH HOH 243 B HOH 245 3 HOH HOH 245 B HOH 258 3 HOH HOH 258 B HOH 259 3 HOH HOH 259 B HOH 260 3 HOH HOH 260 B HOH 261 3 HOH HOH 261 B HOH 262 3 HOH HOH 262 B HOH 263 3 HOH HOH 263 B HOH 264 3 HOH HOH 264 B HOH 265 3 HOH HOH 265 B HOH 266 3 HOH HOH 266 B HOH 267 3 HOH HOH 267 B HOH 268 3 HOH HOH 268 B HOH 269 3 HOH HOH 269 B HOH 280 3 HOH HOH 280 B HOH 281 3 HOH HOH 281 B HOH 282 3 HOH HOH 282 B HOH 283 3 HOH HOH 283 B HOH 287 3 HOH HOH 287 B HOH 288 3 HOH HOH 288 B HOH 289 3 HOH HOH 289 B HOH 290 3 HOH HOH 290 B HOH 291 3 HOH HOH 291 B HOH 292 3 HOH HOH 292 B HOH 293 3 HOH HOH 293 B HOH 294 3 HOH HOH 294 B HOH 297 3 HOH HOH 297 B HOH 298 3 HOH HOH 298 B HOH 299 3 HOH HOH 299 B HOH 301 3 HOH HOH 301 B HOH 302 3 HOH HOH 302 B HOH 303 3 HOH HOH 303 B HOH 305 3 HOH HOH 305 B HOH 310 3 HOH HOH 310 B HOH 311 3 HOH HOH 311 B HOH 312 3 HOH HOH 312 B HOH 314 3 HOH HOH 314 B HOH 315 3 HOH HOH 315 B MET 0 n 1 MET 0 A GLN 1 n 2 GLN 1 A PRO 2 n 3 PRO 2 A ASP 3 n 4 ASP 3 A ALA 4 n 5 ALA 4 A ILE 5 n 6 ILE 5 A ASN 6 n 7 ASN 6 A ALA 7 n 8 ALA 7 A PRO 8 n 9 PRO 8 A VAL 9 n 10 VAL 9 A THR 10 n 11 THR 10 A CYS 11 n 12 CYS 11 A CYS 12 n 13 CYS 12 A TYR 13 n 14 TYR 13 A ASN 14 n 15 ASN 14 A PHE 15 n 16 PHE 15 A THR 16 n 17 THR 16 A ASN 17 n 18 ASN 17 A ARG 18 n 19 ARG 18 A LYS 19 n 20 LYS 19 A ILE 20 n 21 ILE 20 A SER 21 n 22 SER 21 A VAL 22 n 23 VAL 22 A GLN 23 n 24 GLN 23 A ARG 24 n 25 ARG 24 A LEU 25 n 26 LEU 25 A ALA 26 n 27 ALA 26 A SER 27 n 28 SER 27 A TYR 28 n 29 TYR 28 A ARG 29 n 30 ARG 29 A ARG 30 n 31 ARG 30 A ILE 31 n 32 ILE 31 A THR 32 n 33 THR 32 A SER 33 n 34 SER 33 A SER 34 n 35 SER 34 A LYS 35 n 36 LYS 35 A CYS 36 n 37 CYS 36 A PRO 37 n 38 PRO 37 A LYS 38 n 39 LYS 38 A GLU 39 n 40 GLU 39 A ALA 40 n 41 ALA 40 A VAL 41 n 42 VAL 41 A ILE 42 n 43 ILE 42 A PHE 43 n 44 PHE 43 A LYS 44 n 45 LYS 44 A THR 45 n 46 THR 45 A ILE 46 n 47 ILE 46 A VAL 47 n 48 VAL 47 A ALA 48 n 49 ALA 48 A LYS 49 n 50 LYS 49 A GLU 50 n 51 GLU 50 A ILE 51 n 52 ILE 51 A CYS 52 n 53 CYS 52 A ALA 53 n 54 ALA 53 A ASP 54 n 55 ASP 54 A PRO 55 n 56 PRO 55 A LYS 56 n 57 LYS 56 A GLN 57 n 58 GLN 57 A LYS 58 n 59 LYS 58 A TRP 59 n 60 TRP 59 A VAL 60 n 61 VAL 60 A GLN 61 n 62 GLN 61 A ASP 62 n 63 ASP 62 A SER 63 n 64 SER 63 A MET 64 n 65 MET 64 A ASP 65 n 66 ASP 65 A HIS 66 n 67 HIS 66 A LEU 67 n 68 LEU 67 A ASP 68 n 69 ASP 68 A LYS 69 n 70 LYS 69 A GLN 70 n 71 GLN 70 A THR 71 n 72 THR 71 A n 73 72 A n 74 73 A n 75 74 A n 76 75 A n 77 76 A MET 0 n 1 MET 0 B GLN 1 n 2 GLN 1 B PRO 2 n 3 PRO 2 B ASP 3 n 4 ASP 3 B ALA 4 n 5 ALA 4 B ILE 5 n 6 ILE 5 B ASN 6 n 7 ASN 6 B ALA 7 n 8 ALA 7 B PRO 8 n 9 PRO 8 B VAL 9 n 10 VAL 9 B THR 10 n 11 THR 10 B CYS 11 n 12 CYS 11 B CYS 12 n 13 CYS 12 B TYR 13 n 14 TYR 13 B ASN 14 n 15 ASN 14 B PHE 15 n 16 PHE 15 B THR 16 n 17 THR 16 B ASN 17 n 18 ASN 17 B ARG 18 n 19 ARG 18 B LYS 19 n 20 LYS 19 B ILE 20 n 21 ILE 20 B SER 21 n 22 SER 21 B VAL 22 n 23 VAL 22 B GLN 23 n 24 GLN 23 B ARG 24 n 25 ARG 24 B LEU 25 n 26 LEU 25 B ALA 26 n 27 ALA 26 B SER 27 n 28 SER 27 B TYR 28 n 29 TYR 28 B ARG 29 n 30 ARG 29 B ARG 30 n 31 ARG 30 B ILE 31 n 32 ILE 31 B THR 32 n 33 THR 32 B SER 33 n 34 SER 33 B SER 34 n 35 SER 34 B LYS 35 n 36 LYS 35 B CYS 36 n 37 CYS 36 B PRO 37 n 38 PRO 37 B LYS 38 n 39 LYS 38 B GLU 39 n 40 GLU 39 B ALA 40 n 41 ALA 40 B VAL 41 n 42 VAL 41 B ILE 42 n 43 ILE 42 B PHE 43 n 44 PHE 43 B LYS 44 n 45 LYS 44 B THR 45 n 46 THR 45 B ILE 46 n 47 ILE 46 B VAL 47 n 48 VAL 47 B ALA 48 n 49 ALA 48 B LYS 49 n 50 LYS 49 B GLU 50 n 51 GLU 50 B ILE 51 n 52 ILE 51 B CYS 52 n 53 CYS 52 B ALA 53 n 54 ALA 53 B ASP 54 n 55 ASP 54 B PRO 55 n 56 PRO 55 B LYS 56 n 57 LYS 56 B GLN 57 n 58 GLN 57 B LYS 58 n 59 LYS 58 B TRP 59 n 60 TRP 59 B VAL 60 n 61 VAL 60 B GLN 61 n 62 GLN 61 B ASP 62 n 63 ASP 62 B SER 63 n 64 SER 63 B MET 64 n 65 MET 64 B ASP 65 n 66 ASP 65 B HIS 66 n 67 HIS 66 B LEU 67 n 68 LEU 67 B ASP 68 n 69 ASP 68 B LYS 69 n 70 LYS 69 B GLN 70 n 71 GLN 70 B THR 71 n 72 THR 71 B n 73 72 B n 74 73 B n 75 74 B n 76 75 B n 77 76 B author_and_software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 4 tetrameric 2130 -23 9190 6750 -92 16270 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_665 -y+1,-x+1,-z+1/2 crystal symmetry operation 50.7400000000 50.7400000000 53.8250000000 A O VAL 9 A O VAL 10 B N CYS 11 B N CYS 12 A O ILE 51 A O ILE 52 A N PHE 43 A N PHE 44 A O ALA 40 A O ALA 41 A N ILE 31 A N ILE 32 B O ILE 51 B O ILE 52 B N PHE 43 B N PHE 44 B O ILE 42 B O ILE 43 B N ARG 29 B N ARG 30 1 A GLN 72 A GLN 73 1 Y 1 A THR 73 A THR 74 1 Y 1 A PRO 74 A PRO 75 1 Y 1 A LYS 75 A LYS 76 1 Y 1 A THR 76 A THR 77 1 Y 1 B GLN 72 B GLN 73 1 Y 1 B THR 73 B THR 74 1 Y 1 B PRO 74 B PRO 75 1 Y 1 B LYS 75 B LYS 76 1 Y 1 B THR 76 B THR 77 1 Y 1 B GLN 1 -13.06 -65.09 1 B SER 27 -170.09 -178.85 1 B ALA 48 70.68 40.05 PARHCSDX.PRO TOPHCSDX.PRO 30.0 REFLECTIONS FOR R-FREE TEST SELECTED IN 10.0 - 2.0 A RESOLUTION RANGE. THE TWO CHAINS WERE REFINED INDEPENDENTLY. 0.245 0.010 0.191 0.191 1.85 10.0 572 12308 7.0 97.0 RANDOM, UP TO 2.0 A 10000000.00 0.001 1 2.0 MOLECULAR REPLACEMENT PDB ENTRY 1DOM 1.85 10.0 116 1278 10 0 1152 0.014 1.74 27.7 1.46 2.19 1.5 2.32 2.0 2.19 2.0 2.32 2.5 1.85 10.0 1DOK 12318 0.0 0.078 1 15.3 4.59 97.0 1.85 1.92 2.15 0.363 3.82 94.7 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement X-PLOR 3.1 MONOCYTE CHEMOATTRACTANT PROTEIN 1, P-FORM 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N A PRO 2 A PRO 3 HELX_P A ASN 6 A ASN 7 1 1 5 A VAL 22 A VAL 23 HELX_P A ARG 24 A ARG 25 5 2 3 A LYS 58 A LYS 59 HELX_P A LYS 69 A LYS 70 1 3 12 B ASP 3 B ASP 4 HELX_P B ASN 6 B ASN 7 5 4 4 B LYS 58 B LYS 59 HELX_P B LYS 69 B LYS 70 1 5 12 disulf 2.029 A CYS 11 A SG CYS 12 1_555 A CYS 36 A SG CYS 37 1_555 disulf 2.036 A CYS 12 A SG CYS 13 1_555 A CYS 52 A SG CYS 53 1_555 disulf 2.023 B CYS 11 B SG CYS 12 1_555 B CYS 36 B SG CYS 37 1_555 disulf 2.024 B CYS 12 B SG CYS 13 1_555 B CYS 52 B SG CYS 53 1_555 CHEMOATTRACTANT CHEMOATTRACTANT, CYTOKINE given -0.652315 -0.596164 0.468052 -0.546077 -0.058591 -0.835684 0.525628 -0.800722 -0.287332 35.99238 84.54701 71.81376 CCL2_HUMAN UNP 1 1 P13500 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQ KWVQDSMDHLDKQTQTPKT 24 99 1DOK 1 76 P13500 A 1 2 77 24 99 1DOK 1 76 P13500 B 1 2 77 2 3 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 9 A VAL 10 A CYS 11 A CYS 12 B VAL 9 B VAL 10 B CYS 11 B CYS 12 A GLU 50 A GLU 51 A ALA 53 A ALA 54 A ALA 40 A ALA 41 A THR 45 A THR 46 A LEU 25 A LEU 26 A ILE 31 A ILE 32 B GLU 50 B GLU 51 B ALA 53 B ALA 54 B VAL 41 B VAL 42 B THR 45 B THR 46 B LEU 25 B LEU 26 B ARG 30 B ARG 31 BINDING SITE FOR RESIDUE SO4 B 401 B SO4 401 Software 8 BINDING SITE FOR RESIDUE SO4 A 402 A SO4 402 Software 7 A ASN 6 A ASN 7 8 1_555 A ASN 14 A ASN 15 8 3_654 B THR 16 B THR 17 8 1_555 B ASN 17 B ASN 18 8 1_555 B ARG 18 B ARG 19 8 1_555 B LYS 35 B LYS 36 8 3_654 B HOH 234 F HOH 8 3_654 B HOH 299 F HOH 8 1_555 A SER 33 A SER 34 7 8_665 A SER 34 A SER 35 7 8_665 A SER 34 A SER 35 7 1_555 A HOH 279 E HOH 7 1_555 A HOH 279 E HOH 7 8_665 A HOH 304 E HOH 7 8_665 A HOH 304 E HOH 7 1_555 96 P 43 21 2