0.006478
0.000000
0.001096
0.000000
0.020280
0.000000
0.000000
0.000000
0.024333
0.00000
0.00000
0.00000
Zanotti, G.
Cianci, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90
99.6
90
154.36
49.31
41.68
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S2
153.223
n
S-MERCAPTOCYSTEINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C8 H14 O2 S2
206.326
5-[(3S)-1,2-dithiolan-3-yl]pentanoic acid
non-polymer
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
NE
Biochim.Biophys.Acta
BBACAQ
0113
0006-3002
1481
103
108
10.1016/S0167-4838(00)00114-X
11004580
Specific interaction of lipoate at the active site of rhodanese.
2000
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
127
149
162
THE STRUCTURE OF BOVINE LIVER RHODANESE. II. THE ACTIVE SITE IN THE SULFUR-SUBSTITUTED AND THE SULFUR-FREE ENZYME
1979
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
54
481
486
10.1107/S090744499701216X
ACTIVE SITE STRUCTURAL FEATURES FOR CHEMICALLY MODIFIED FORMS OF RHODANESE
1998
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
300.
1
AREA DETECTOR
1998-06-11
SIEMENS HI-STAR
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
SIEMENS
32983.359
RHODANESE
2.8.1.1
1
nat
polymer
206.326
5-[(3S)-1,2-dithiolan-3-yl]pentanoic acid
1
syn
non-polymer
18.015
water
112
nat
water
no
yes
VHQVLYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGF
ADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSL
LKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLT
KPLIAT(CSS)RKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQGKG
VHQVLYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGF
ADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSL
LKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLT
KPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQGKG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
Bos
sample
9913
Bos taurus
2
2.37
48.09
VAPOR DIFFUSION, SITTING DROP
7
Crystals were obtained from ammonium sulfate.
After soaking with 28% PEG 6000, 40 mM phosphate buffer, pH=7,
4 mM DL-lipoate was added
, VAPOR DIFFUSION, SITTING DROP, temperature 20K, temperature 293K
293
software
repository
Initial release
Version format compliance
Version format compliance
Non-polymer description
Refinement description
1
0
2000-12-13
1
1
2008-04-27
1
2
2011-07-13
1
3
2011-10-05
1
4
2017-10-04
_software.classification
rhodanese
rhodanese
rhodanese
rhodanese
rhodanese
rhodanese
RCSB
Y
RCSB
1999-12-23
REL
LPB
5-[(3S)-1,2-dithiolan-3-yl]pentanoic acid
HOH
water
LIP
900
2
LPB
LPB
900
A
H2O
1
3
HOH
HOH
901
A
H2O
2
3
HOH
HOH
902
A
H2O
3
3
HOH
HOH
903
A
H2O
4
3
HOH
HOH
904
A
H2O
5
3
HOH
HOH
905
A
H2O
6
3
HOH
HOH
906
A
H2O
7
3
HOH
HOH
907
A
H2O
8
3
HOH
HOH
908
A
H2O
9
3
HOH
HOH
909
A
H2O
10
3
HOH
HOH
910
A
H2O
11
3
HOH
HOH
911
A
H2O
12
3
HOH
HOH
912
A
H2O
13
3
HOH
HOH
913
A
H2O
14
3
HOH
HOH
914
A
H2O
15
3
HOH
HOH
915
A
H2O
16
3
HOH
HOH
916
A
H2O
17
3
HOH
HOH
917
A
H2O
18
3
HOH
HOH
918
A
H2O
19
3
HOH
HOH
919
A
H2O
20
3
HOH
HOH
920
A
H2O
21
3
HOH
HOH
921
A
H2O
22
3
HOH
HOH
922
A
H2O
23
3
HOH
HOH
923
A
H2O
24
3
HOH
HOH
924
A
H2O
25
3
HOH
HOH
925
A
H2O
26
3
HOH
HOH
926
A
H2O
27
3
HOH
HOH
927
A
H2O
28
3
HOH
HOH
928
A
H2O
29
3
HOH
HOH
929
A
H2O
30
3
HOH
HOH
930
A
H2O
31
3
HOH
HOH
931
A
H2O
32
3
HOH
HOH
932
A
H2O
33
3
HOH
HOH
933
A
H2O
34
3
HOH
HOH
934
A
H2O
35
3
HOH
HOH
935
A
H2O
36
3
HOH
HOH
936
A
H2O
37
3
HOH
HOH
937
A
H2O
38
3
HOH
HOH
938
A
H2O
39
3
HOH
HOH
939
A
H2O
40
3
HOH
HOH
940
A
H2O
41
3
HOH
HOH
941
A
H2O
42
3
HOH
HOH
942
A
H2O
43
3
HOH
HOH
943
A
H2O
44
3
HOH
HOH
944
A
H2O
45
3
HOH
HOH
945
A
H2O
46
3
HOH
HOH
946
A
H2O
47
3
HOH
HOH
947
A
H2O
48
3
HOH
HOH
948
A
H2O
49
3
HOH
HOH
949
A
H2O
50
3
HOH
HOH
950
A
H2O
51
3
HOH
HOH
951
A
H2O
52
3
HOH
HOH
952
A
H2O
53
3
HOH
HOH
953
A
H2O
54
3
HOH
HOH
954
A
H2O
55
3
HOH
HOH
955
A
H2O
56
3
HOH
HOH
956
A
H2O
57
3
HOH
HOH
957
A
H2O
58
3
HOH
HOH
958
A
H2O
59
3
HOH
HOH
959
A
H2O
60
3
HOH
HOH
960
A
H2O
61
3
HOH
HOH
961
A
H2O
62
3
HOH
HOH
962
A
H2O
63
3
HOH
HOH
963
A
H2O
64
3
HOH
HOH
964
A
H2O
65
3
HOH
HOH
965
A
H2O
66
3
HOH
HOH
966
A
H2O
67
3
HOH
HOH
967
A
H2O
68
3
HOH
HOH
968
A
H2O
69
3
HOH
HOH
969
A
H2O
70
3
HOH
HOH
970
A
H2O
71
3
HOH
HOH
971
A
H2O
72
3
HOH
HOH
972
A
H2O
73
3
HOH
HOH
973
A
H2O
74
3
HOH
HOH
974
A
H2O
75
3
HOH
HOH
975
A
H2O
76
3
HOH
HOH
976
A
H2O
77
3
HOH
HOH
977
A
H2O
78
3
HOH
HOH
978
A
H2O
79
3
HOH
HOH
979
A
H2O
80
3
HOH
HOH
980
A
H2O
81
3
HOH
HOH
981
A
H2O
82
3
HOH
HOH
982
A
H2O
83
3
HOH
HOH
983
A
H2O
84
3
HOH
HOH
984
A
H2O
85
3
HOH
HOH
985
A
H2O
86
3
HOH
HOH
986
A
H2O
87
3
HOH
HOH
987
A
H2O
88
3
HOH
HOH
988
A
H2O
89
3
HOH
HOH
989
A
H2O
90
3
HOH
HOH
990
A
H2O
91
3
HOH
HOH
991
A
H2O
92
3
HOH
HOH
992
A
H2O
93
3
HOH
HOH
993
A
H2O
94
3
HOH
HOH
994
A
H2O
95
3
HOH
HOH
995
A
H2O
96
3
HOH
HOH
996
A
H2O
97
3
HOH
HOH
997
A
H2O
98
3
HOH
HOH
998
A
H2O
99
3
HOH
HOH
999
A
H2O
100
3
HOH
HOH
1000
A
H2O
101
3
HOH
HOH
1001
A
H2O
102
3
HOH
HOH
1002
A
H2O
103
3
HOH
HOH
1003
A
H2O
104
3
HOH
HOH
1004
A
H2O
105
3
HOH
HOH
1005
A
H2O
106
3
HOH
HOH
1006
A
H2O
107
3
HOH
HOH
1007
A
H2O
108
3
HOH
HOH
1008
A
H2O
109
3
HOH
HOH
1009
A
H2O
110
3
HOH
HOH
1010
A
H2O
111
3
HOH
HOH
1011
A
H2O
112
3
HOH
HOH
1012
A
VAL
1
n
1
VAL
1
A
HIS
2
n
2
HIS
2
A
GLN
3
n
3
GLN
3
A
VAL
4
n
4
VAL
4
A
LEU
5
n
5
LEU
5
A
TYR
6
n
6
TYR
6
A
ARG
7
n
7
ARG
7
A
ALA
8
n
8
ALA
8
A
LEU
9
n
9
LEU
9
A
VAL
10
n
10
VAL
10
A
SER
11
n
11
SER
11
A
THR
12
n
12
THR
12
A
LYS
13
n
13
LYS
13
A
TRP
14
n
14
TRP
14
A
LEU
15
n
15
LEU
15
A
ALA
16
n
16
ALA
16
A
GLU
17
n
17
GLU
17
A
SER
18
n
18
SER
18
A
VAL
19
n
19
VAL
19
A
ARG
20
n
20
ARG
20
A
ALA
21
n
21
ALA
21
A
GLY
22
n
22
GLY
22
A
LYS
23
n
23
LYS
23
A
VAL
24
n
24
VAL
24
A
GLY
25
n
25
GLY
25
A
PRO
26
n
26
PRO
26
A
GLY
27
n
27
GLY
27
A
LEU
28
n
28
LEU
28
A
ARG
29
n
29
ARG
29
A
VAL
30
n
30
VAL
30
A
LEU
31
n
31
LEU
31
A
ASP
32
n
32
ASP
32
A
ALA
33
n
33
ALA
33
A
SER
34
n
34
SER
34
A
TRP
35
n
35
TRP
35
A
TYR
36
n
36
TYR
36
A
SER
37
n
37
SER
37
A
PRO
38
n
38
PRO
38
A
GLY
39
n
39
GLY
39
A
THR
40
n
40
THR
40
A
ARG
41
n
41
ARG
41
A
GLU
42
n
42
GLU
42
A
ALA
43
n
43
ALA
43
A
ARG
44
n
44
ARG
44
A
LYS
45
n
45
LYS
45
A
GLU
46
n
46
GLU
46
A
TYR
47
n
47
TYR
47
A
LEU
48
n
48
LEU
48
A
GLU
49
n
49
GLU
49
A
ARG
50
n
50
ARG
50
A
HIS
51
n
51
HIS
51
A
VAL
52
n
52
VAL
52
A
PRO
53
n
53
PRO
53
A
GLY
54
n
54
GLY
54
A
ALA
55
n
55
ALA
55
A
SER
56
n
56
SER
56
A
PHE
57
n
57
PHE
57
A
PHE
58
n
58
PHE
58
A
ASP
59
n
59
ASP
59
A
ILE
60
n
60
ILE
60
A
GLU
61
n
61
GLU
61
A
GLU
62
n
62
GLU
62
A
CYS
63
n
63
CYS
63
A
ARG
64
n
64
ARG
64
A
ASP
65
n
65
ASP
65
A
LYS
66
n
66
LYS
66
A
ALA
67
n
67
ALA
67
A
SER
68
n
68
SER
68
A
PRO
69
n
69
PRO
69
A
TYR
70
n
70
TYR
70
A
GLU
71
n
71
GLU
71
A
VAL
72
n
72
VAL
72
A
MET
73
n
73
MET
73
A
LEU
74
n
74
LEU
74
A
PRO
75
n
75
PRO
75
A
SER
76
n
76
SER
76
A
GLU
77
n
77
GLU
77
A
ALA
78
n
78
ALA
78
A
GLY
79
n
79
GLY
79
A
PHE
80
n
80
PHE
80
A
ALA
81
n
81
ALA
81
A
ASP
82
n
82
ASP
82
A
TYR
83
n
83
TYR
83
A
VAL
84
n
84
VAL
84
A
GLY
85
n
85
GLY
85
A
SER
86
n
86
SER
86
A
LEU
87
n
87
LEU
87
A
GLY
88
n
88
GLY
88
A
ILE
89
n
89
ILE
89
A
SER
90
n
90
SER
90
A
ASN
91
n
91
ASN
91
A
ASP
92
n
92
ASP
92
A
THR
93
n
93
THR
93
A
HIS
94
n
94
HIS
94
A
VAL
95
n
95
VAL
95
A
VAL
96
n
96
VAL
96
A
VAL
97
n
97
VAL
97
A
TYR
98
n
98
TYR
98
A
ASP
99
n
99
ASP
99
A
GLY
100
n
100
GLY
100
A
ASP
101
n
101
ASP
101
A
ASP
102
n
102
ASP
102
A
LEU
103
n
103
LEU
103
A
GLY
104
n
104
GLY
104
A
SER
105
n
105
SER
105
A
PHE
106
n
106
PHE
106
A
TYR
107
n
107
TYR
107
A
ALA
108
n
108
ALA
108
A
PRO
109
n
109
PRO
109
A
ARG
110
n
110
ARG
110
A
VAL
111
n
111
VAL
111
A
TRP
112
n
112
TRP
112
A
TRP
113
n
113
TRP
113
A
MET
114
n
114
MET
114
A
PHE
115
n
115
PHE
115
A
ARG
116
n
116
ARG
116
A
VAL
117
n
117
VAL
117
A
PHE
118
n
118
PHE
118
A
GLY
119
n
119
GLY
119
A
HIS
120
n
120
HIS
120
A
ARG
121
n
121
ARG
121
A
THR
122
n
122
THR
122
A
VAL
123
n
123
VAL
123
A
SER
124
n
124
SER
124
A
VAL
125
n
125
VAL
125
A
LEU
126
n
126
LEU
126
A
ASN
127
n
127
ASN
127
A
GLY
128
n
128
GLY
128
A
GLY
129
n
129
GLY
129
A
PHE
130
n
130
PHE
130
A
ARG
131
n
131
ARG
131
A
ASN
132
n
132
ASN
132
A
TRP
133
n
133
TRP
133
A
LEU
134
n
134
LEU
134
A
LYS
135
n
135
LYS
135
A
GLU
136
n
136
GLU
136
A
GLY
137
n
137
GLY
137
A
HIS
138
n
138
HIS
138
A
PRO
139
n
139
PRO
139
A
VAL
140
n
140
VAL
140
A
THR
141
n
141
THR
141
A
SER
142
n
142
SER
142
A
GLU
143
n
143
GLU
143
A
PRO
144
n
144
PRO
144
A
SER
145
n
145
SER
145
A
ARG
146
n
146
ARG
146
A
PRO
147
n
147
PRO
147
A
GLU
148
n
148
GLU
148
A
PRO
149
n
149
PRO
149
A
ALA
150
n
150
ALA
150
A
ILE
151
n
151
ILE
151
A
PHE
152
n
152
PHE
152
A
LYS
153
n
153
LYS
153
A
ALA
154
n
154
ALA
154
A
THR
155
n
155
THR
155
A
LEU
156
n
156
LEU
156
A
ASN
157
n
157
ASN
157
A
ARG
158
n
158
ARG
158
A
SER
159
n
159
SER
159
A
LEU
160
n
160
LEU
160
A
LEU
161
n
161
LEU
161
A
LYS
162
n
162
LYS
162
A
THR
163
n
163
THR
163
A
TYR
164
n
164
TYR
164
A
GLU
165
n
165
GLU
165
A
GLN
166
n
166
GLN
166
A
VAL
167
n
167
VAL
167
A
LEU
168
n
168
LEU
168
A
GLU
169
n
169
GLU
169
A
ASN
170
n
170
ASN
170
A
LEU
171
n
171
LEU
171
A
GLU
172
n
172
GLU
172
A
SER
173
n
173
SER
173
A
LYS
174
n
174
LYS
174
A
ARG
175
n
175
ARG
175
A
PHE
176
n
176
PHE
176
A
GLN
177
n
177
GLN
177
A
LEU
178
n
178
LEU
178
A
VAL
179
n
179
VAL
179
A
ASP
180
n
180
ASP
180
A
SER
181
n
181
SER
181
A
ARG
182
n
182
ARG
182
A
ALA
183
n
183
ALA
183
A
GLN
184
n
184
GLN
184
A
GLY
185
n
185
GLY
185
A
ARG
186
n
186
ARG
186
A
TYR
187
n
187
TYR
187
A
LEU
188
n
188
LEU
188
A
GLY
189
n
189
GLY
189
A
THR
190
n
190
THR
190
A
GLN
191
n
191
GLN
191
A
PRO
192
n
192
PRO
192
A
GLU
193
n
193
GLU
193
A
PRO
194
n
194
PRO
194
A
ASP
195
n
195
ASP
195
A
ALA
196
n
196
ALA
196
A
VAL
197
n
197
VAL
197
A
GLY
198
n
198
GLY
198
A
LEU
199
n
199
LEU
199
A
ASP
200
n
200
ASP
200
A
SER
201
n
201
SER
201
A
GLY
202
n
202
GLY
202
A
HIS
203
n
203
HIS
203
A
ILE
204
n
204
ILE
204
A
ARG
205
n
205
ARG
205
A
GLY
206
n
206
GLY
206
A
SER
207
n
207
SER
207
A
VAL
208
n
208
VAL
208
A
ASN
209
n
209
ASN
209
A
MET
210
n
210
MET
210
A
PRO
211
n
211
PRO
211
A
PHE
212
n
212
PHE
212
A
MET
213
n
213
MET
213
A
ASN
214
n
214
ASN
214
A
PHE
215
n
215
PHE
215
A
LEU
216
n
216
LEU
216
A
THR
217
n
217
THR
217
A
GLU
218
n
218
GLU
218
A
ASP
219
n
219
ASP
219
A
GLY
220
n
220
GLY
220
A
PHE
221
n
221
PHE
221
A
GLU
222
n
222
GLU
222
A
LYS
223
n
223
LYS
223
A
SER
224
n
224
SER
224
A
PRO
225
n
225
PRO
225
A
GLU
226
n
226
GLU
226
A
GLU
227
n
227
GLU
227
A
LEU
228
n
228
LEU
228
A
ARG
229
n
229
ARG
229
A
ALA
230
n
230
ALA
230
A
MET
231
n
231
MET
231
A
PHE
232
n
232
PHE
232
A
GLU
233
n
233
GLU
233
A
ALA
234
n
234
ALA
234
A
LYS
235
n
235
LYS
235
A
LYS
236
n
236
LYS
236
A
VAL
237
n
237
VAL
237
A
ASP
238
n
238
ASP
238
A
LEU
239
n
239
LEU
239
A
THR
240
n
240
THR
240
A
LYS
241
n
241
LYS
241
A
PRO
242
n
242
PRO
242
A
LEU
243
n
243
LEU
243
A
ILE
244
n
244
ILE
244
A
ALA
245
n
245
ALA
245
A
THR
246
n
246
THR
246
A
CSS
247
n
247
CSS
247
A
ARG
248
n
248
ARG
248
A
LYS
249
n
249
LYS
249
A
GLY
250
n
250
GLY
250
A
VAL
251
n
251
VAL
251
A
THR
252
n
252
THR
252
A
ALA
253
n
253
ALA
253
A
CYS
254
n
254
CYS
254
A
HIS
255
n
255
HIS
255
A
ILE
256
n
256
ILE
256
A
ALA
257
n
257
ALA
257
A
LEU
258
n
258
LEU
258
A
ALA
259
n
259
ALA
259
A
ALA
260
n
260
ALA
260
A
TYR
261
n
261
TYR
261
A
LEU
262
n
262
LEU
262
A
CYS
263
n
263
CYS
263
A
GLY
264
n
264
GLY
264
A
LYS
265
n
265
LYS
265
A
PRO
266
n
266
PRO
266
A
ASP
267
n
267
ASP
267
A
VAL
268
n
268
VAL
268
A
ALA
269
n
269
ALA
269
A
ILE
270
n
270
ILE
270
A
TYR
271
n
271
TYR
271
A
ASP
272
n
272
ASP
272
A
GLY
273
n
273
GLY
273
A
SER
274
n
274
SER
274
A
TRP
275
n
275
TRP
275
A
PHE
276
n
276
PHE
276
A
GLU
277
n
277
GLU
277
A
TRP
278
n
278
TRP
278
A
PHE
279
n
279
PHE
279
A
HIS
280
n
280
HIS
280
A
ARG
281
n
281
ARG
281
A
ALA
282
n
282
ALA
282
A
PRO
283
n
283
PRO
283
A
PRO
284
n
284
PRO
284
A
GLU
285
n
285
GLU
285
A
THR
286
n
286
THR
286
A
TRP
287
n
287
TRP
287
A
VAL
288
n
288
VAL
288
A
SER
289
n
289
SER
289
A
GLN
290
n
290
GLN
290
A
GLY
291
n
291
GLY
291
A
LYS
292
n
292
LYS
292
A
GLY
293
n
293
GLY
293
A
author_defined_assembly
1
monomeric
A
CSS
247
S-MERCAPTOCYSTEINE
A
CSS
247
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
10
A
N
VAL
10
A
O
VAL
125
A
O
VAL
125
A
N
SER
124
A
N
SER
124
A
O
VAL
95
A
O
VAL
95
A
N
VAL
96
A
N
VAL
96
A
O
ARG
29
A
O
ARG
29
A
O
VAL
30
A
O
VAL
30
A
N
SER
56
A
N
SER
56
A
N
LYS
162
A
N
LYS
162
A
O
ILE
270
A
O
ILE
270
A
N
ALA
269
A
N
ALA
269
A
O
LEU
243
A
O
LEU
243
A
N
ILE
244
A
N
ILE
244
A
O
GLN
177
A
O
GLN
177
A
N
ASP
180
A
N
ASP
180
A
O
VAL
208
A
O
VAL
208
A
N
HIS
203
A
N
HIS
203
A
O
VAL
288
A
O
VAL
288
1
6.71
0.80
106.30
113.01
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
14
14
14
N
1
-5.80
0.80
107.30
101.50
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
14
14
14
N
1
6.85
0.80
106.30
113.15
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
35
35
35
N
1
-6.08
1.00
110.10
104.02
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
35
35
35
N
1
-5.90
0.80
107.30
101.40
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
35
35
35
N
1
-13.94
2.20
111.50
97.56
A
A
A
N
CA
CB
VAL
VAL
VAL
84
84
84
N
1
5.70
0.80
106.30
112.00
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
112
112
112
N
1
-5.30
0.80
107.30
102.00
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
112
112
112
N
1
6.22
0.80
106.30
112.52
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
113
113
113
N
1
-4.88
0.80
107.30
102.42
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
113
113
113
N
1
3.09
0.50
120.30
123.39
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
131
131
131
N
1
6.14
0.80
106.30
112.44
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
133
133
133
N
1
-5.63
0.80
107.30
101.67
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
133
133
133
N
1
3.03
0.50
120.30
123.33
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
182
182
182
N
1
-3.71
0.60
121.00
117.29
A
A
A
CB
CG
CD1
TYR
TYR
TYR
187
187
187
N
1
3.45
0.50
120.30
123.75
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
229
229
229
N
1
6.43
0.80
106.30
112.73
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
275
275
275
N
1
-5.74
0.80
107.30
101.56
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
275
275
275
N
1
7.06
0.80
106.30
113.36
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
278
278
278
N
1
-6.28
0.80
107.30
101.02
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
278
278
278
N
1
6.78
0.80
106.30
113.08
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
287
287
287
N
1
-5.77
0.80
107.30
101.53
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
287
287
287
N
1
A
A
NE2
CD2
HIS
HIS
51
51
-0.071
0.011
1.373
1.302
N
1
A
A
NE2
CD2
HIS
HIS
138
138
-0.066
0.011
1.373
1.307
N
1
A
A
NE2
CD2
HIS
HIS
255
255
-0.067
0.011
1.373
1.306
N
1
A
A
NE2
CD2
HIS
HIS
280
280
-0.068
0.011
1.373
1.305
N
1
A
HIS
2
144.15
-175.60
1
A
THR
40
-101.85
-75.69
1
A
VAL
72
18.30
74.57
1
A
PHE
106
-141.07
-68.74
1
A
CSS
247
-167.38
-137.78
1
A
SER
274
51.15
-156.70
1
A
LYS
292
60.61
-76.81
0.2300000
0.1700000
0.1850000
0.1700000
2.01
55
875
18241
18062
random
1
0
0
Param19X.pro (XPLOR)
2.01
55
112
2451
12
0
2327
0.014
2.3
2.01
55.
1DP2
18241
18062
0
0
0.0430000
1
14
2.3
85.6
0.1340000
2.01
2.2
3174
1
1.8
68
model building
X-PLOR
refinement
X-PLOR
3.1
data collection
FRAMBO
data scaling
SAINT
phasing
X-PLOR
SULFUR-SUBSTITUTED RHODANESE (E.C.2.8.1.1) / LIPOIC ACID COMPLEX
CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN RHODANESE AND LIPOATE
1
N
N
2
N
N
3
N
N
A
THR
12
A
THR
12
HELX_P
A
ALA
21
A
ALA
21
1
1
10
A
GLU
42
A
GLU
42
HELX_P
A
ARG
50
A
ARG
50
1
2
9
A
SER
76
A
SER
76
HELX_P
A
LEU
87
A
LEU
87
1
3
12
A
TYR
107
A
TYR
107
HELX_P
A
PHE
118
A
PHE
118
1
4
12
A
GLY
128
A
GLY
128
HELX_P
A
GLU
136
A
GLU
136
1
5
9
A
ASN
157
A
ASN
157
HELX_P
A
SER
159
A
SER
159
5
6
3
A
THR
163
A
THR
163
HELX_P
A
LYS
174
A
LYS
174
1
7
12
A
ALA
183
A
ALA
183
HELX_P
A
LEU
188
A
LEU
188
1
8
6
A
PRO
211
A
PRO
211
HELX_P
A
PHE
215
A
PHE
215
5
9
5
A
SER
224
A
SER
224
HELX_P
A
LYS
235
A
LYS
235
1
10
12
A
THR
252
A
THR
252
HELX_P
A
CYS
263
A
CYS
263
1
11
12
A
GLY
273
A
GLY
273
HELX_P
A
ALA
282
A
ALA
282
1
12
10
A
PRO
283
A
PRO
283
HELX_P
A
GLU
285
A
GLU
285
5
13
3
covale
1.329
A
THR
246
A
C
THR
246
1_555
A
CSS
247
A
N
CSS
247
1_555
covale
1.341
A
CSS
247
A
C
CSS
247
1_555
A
ARG
248
A
N
ARG
248
1_555
TRANSFERASE
Rhodanese, liopate, sulfurtransferase, TRANSFERASE
THTR_BOVIN
UNP
1
1
P00586
VHQVLYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGF
ADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSL
LKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLT
KPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQGKG
1
293
1DP2
1
293
P00586
A
1
1
293
5
5
2
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
A
LEU
9
A
LEU
9
A
SER
11
A
SER
11
A
VAL
123
A
VAL
123
A
ASN
127
A
ASN
127
A
HIS
94
A
HIS
94
A
TYR
98
A
TYR
98
A
LEU
28
A
LEU
28
A
ASP
32
A
ASP
32
A
SER
56
A
SER
56
A
PHE
57
A
PHE
57
A
LEU
161
A
LEU
161
A
LYS
162
A
LYS
162
A
ALA
269
A
ALA
269
A
TYR
271
A
TYR
271
A
LEU
243
A
LEU
243
A
THR
246
A
THR
246
A
GLN
177
A
GLN
177
A
ASP
180
A
ASP
180
A
VAL
208
A
VAL
208
A
ASN
209
A
ASN
209
A
HIS
203
A
HIS
203
A
ILE
204
A
ILE
204
A
TRP
287
A
TRP
287
A
VAL
288
A
VAL
288
BINDING SITE FOR RESIDUE LPB A 900
Software
8
A
PHE
106
A
PHE
106
8
1_555
A
THR
141
A
THR
141
8
4_547
A
SER
142
A
SER
142
8
4_547
A
GLU
143
A
GLU
143
8
4_547
A
ARG
186
A
ARG
186
8
1_555
A
HOH
1009
C
HOH
8
1_555
A
HOH
1010
C
HOH
8
1_555
A
HOH
1012
C
HOH
8
1_555
5
C 1 2 1