0.019658
0.000000
0.001530
0.000000
0.047617
0.000000
0.000000
0.000000
0.019123
0.00000
0.00000
0.00000
Sharma, M.
Yadav, S.
Karthikeyan, S.
Kumar, S.
Paramasivam, M.
Srinivasan, A.
Singh, T.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
94.45
90.00
50.871
21.001
52.451
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Three-dimensional Structure of a Neurotoxin from Red Scorpion (Buthus tamulus) at 2.2A Resolution
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298.0
1
IMAGE PLATE
1999-06-08
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
7046.870
NEUROTOXIN
2
nat
polymer
18.015
water
91
nat
water
no
no
GEDGYIADGDNCTYICTFNNYCHALCTDKKGDSGACDWWVPYGVVCWCEDLPTPVPIRGSGKCR
GEDGYIADGDNCTYICTFNNYCHALCTDKKGDSGACDWWVPYGVVCWCEDLPTPVPIRGSGKCR
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Indian red scorpion
Mesobuthus
sample
34647
Mesobuthus tamulus
VENOM
4
1.98
37.90
VAPOR DIFFUSION, SITTING DROP
7.2
Protein Concentration 7.5mg/ml, Buffer Tris-Hcl 25mM, Percipitant 82% MPD, Additive 0.001 Cacl2, pH 7.2, VAPOR DIFFUSION, SITTING DROP
repository
Initial release
Version format compliance
Version format compliance
1
0
2000-12-30
1
1
2008-04-27
1
2
2011-07-13
RCSB
Y
RCSB
1999-12-30
REL
HOH
water
WAT
1
2
HOH
HOH
65
A
WAT
2
2
HOH
HOH
66
A
WAT
3
2
HOH
HOH
67
A
WAT
4
2
HOH
HOH
68
A
WAT
5
2
HOH
HOH
69
A
WAT
6
2
HOH
HOH
70
A
WAT
7
2
HOH
HOH
71
A
WAT
8
2
HOH
HOH
72
A
WAT
9
2
HOH
HOH
73
A
WAT
10
2
HOH
HOH
74
A
WAT
11
2
HOH
HOH
75
A
WAT
12
2
HOH
HOH
76
A
WAT
13
2
HOH
HOH
77
A
WAT
14
2
HOH
HOH
78
A
WAT
15
2
HOH
HOH
79
A
WAT
16
2
HOH
HOH
80
A
WAT
17
2
HOH
HOH
81
A
WAT
18
2
HOH
HOH
82
A
WAT
19
2
HOH
HOH
83
A
WAT
20
2
HOH
HOH
84
A
WAT
21
2
HOH
HOH
85
A
WAT
22
2
HOH
HOH
86
A
WAT
23
2
HOH
HOH
87
A
WAT
32
2
HOH
HOH
88
A
WAT
37
2
HOH
HOH
89
A
WAT
38
2
HOH
HOH
90
A
WAT
41
2
HOH
HOH
91
A
WAT
42
2
HOH
HOH
92
A
WAT
43
2
HOH
HOH
93
A
WAT
44
2
HOH
HOH
94
A
WAT
45
2
HOH
HOH
95
A
WAT
46
2
HOH
HOH
96
A
WAT
47
2
HOH
HOH
97
A
WAT
48
2
HOH
HOH
98
A
WAT
49
2
HOH
HOH
99
A
WAT
50
2
HOH
HOH
100
A
WAT
52
2
HOH
HOH
101
A
WAT
53
2
HOH
HOH
102
A
WAT
54
2
HOH
HOH
103
A
WAT
55
2
HOH
HOH
104
A
WAT
56
2
HOH
HOH
105
A
WAT
57
2
HOH
HOH
106
A
WAT
58
2
HOH
HOH
107
A
WAT
59
2
HOH
HOH
108
A
WAT
61
2
HOH
HOH
109
A
WAT
62
2
HOH
HOH
110
A
WAT
63
2
HOH
HOH
111
A
WAT
64
2
HOH
HOH
112
A
WAT
65
2
HOH
HOH
113
A
WAT
69
2
HOH
HOH
114
A
WAT
73
2
HOH
HOH
115
A
WAT
80
2
HOH
HOH
116
A
WAT
81
2
HOH
HOH
117
A
WAT
89
2
HOH
HOH
118
A
WAT
24
2
HOH
HOH
65
B
WAT
25
2
HOH
HOH
66
B
WAT
26
2
HOH
HOH
67
B
WAT
27
2
HOH
HOH
68
B
WAT
28
2
HOH
HOH
69
B
WAT
29
2
HOH
HOH
70
B
WAT
30
2
HOH
HOH
71
B
WAT
31
2
HOH
HOH
72
B
WAT
33
2
HOH
HOH
73
B
WAT
34
2
HOH
HOH
74
B
WAT
35
2
HOH
HOH
75
B
WAT
36
2
HOH
HOH
76
B
WAT
39
2
HOH
HOH
77
B
WAT
40
2
HOH
HOH
78
B
WAT
51
2
HOH
HOH
79
B
WAT
60
2
HOH
HOH
80
B
WAT
66
2
HOH
HOH
81
B
WAT
67
2
HOH
HOH
82
B
WAT
68
2
HOH
HOH
83
B
WAT
70
2
HOH
HOH
84
B
WAT
71
2
HOH
HOH
85
B
WAT
72
2
HOH
HOH
86
B
WAT
74
2
HOH
HOH
87
B
WAT
75
2
HOH
HOH
88
B
WAT
76
2
HOH
HOH
89
B
WAT
77
2
HOH
HOH
90
B
WAT
78
2
HOH
HOH
91
B
WAT
79
2
HOH
HOH
92
B
WAT
82
2
HOH
HOH
93
B
WAT
83
2
HOH
HOH
94
B
WAT
84
2
HOH
HOH
95
B
WAT
85
2
HOH
HOH
96
B
WAT
86
2
HOH
HOH
97
B
WAT
87
2
HOH
HOH
98
B
WAT
88
2
HOH
HOH
99
B
WAT
90
2
HOH
HOH
100
B
WAT
91
2
HOH
HOH
101
B
GLY
1
n
1
GLY
1
A
GLU
2
n
2
GLU
2
A
ASP
3
n
3
ASP
3
A
GLY
4
n
4
GLY
4
A
TYR
5
n
5
TYR
5
A
ILE
6
n
6
ILE
6
A
ALA
7
n
7
ALA
7
A
ASP
8
n
8
ASP
8
A
GLY
9
n
9
GLY
9
A
ASP
10
n
10
ASP
10
A
ASN
11
n
11
ASN
11
A
CYS
12
n
12
CYS
12
A
THR
13
n
13
THR
13
A
TYR
14
n
14
TYR
14
A
ILE
15
n
15
ILE
15
A
CYS
16
n
16
CYS
16
A
THR
17
n
17
THR
17
A
PHE
18
n
18
PHE
18
A
ASN
19
n
19
ASN
19
A
ASN
20
n
20
ASN
20
A
TYR
21
n
21
TYR
21
A
CYS
22
n
22
CYS
22
A
HIS
23
n
23
HIS
23
A
ALA
24
n
24
ALA
24
A
LEU
25
n
25
LEU
25
A
CYS
26
n
26
CYS
26
A
THR
27
n
27
THR
27
A
ASP
28
n
28
ASP
28
A
LYS
29
n
29
LYS
29
A
LYS
30
n
30
LYS
30
A
GLY
31
n
31
GLY
31
A
ASP
32
n
32
ASP
32
A
SER
33
n
33
SER
33
A
GLY
34
n
34
GLY
34
A
ALA
35
n
35
ALA
35
A
CYS
36
n
36
CYS
36
A
ASP
37
n
37
ASP
37
A
TRP
38
n
38
TRP
38
A
TRP
39
n
39
TRP
39
A
VAL
40
n
40
VAL
40
A
PRO
41
n
41
PRO
41
A
TYR
42
n
42
TYR
42
A
GLY
43
n
43
GLY
43
A
VAL
44
n
44
VAL
44
A
VAL
45
n
45
VAL
45
A
CYS
46
n
46
CYS
46
A
TRP
47
n
47
TRP
47
A
CYS
48
n
48
CYS
48
A
GLU
49
n
49
GLU
49
A
ASP
50
n
50
ASP
50
A
LEU
51
n
51
LEU
51
A
PRO
52
n
52
PRO
52
A
THR
53
n
53
THR
53
A
PRO
54
n
54
PRO
54
A
VAL
55
n
55
VAL
55
A
PRO
56
n
56
PRO
56
A
ILE
57
n
57
ILE
57
A
ARG
58
n
58
ARG
58
A
GLY
59
n
59
GLY
59
A
SER
60
n
60
SER
60
A
GLY
61
n
61
GLY
61
A
LYS
62
n
62
LYS
62
A
CYS
63
n
63
CYS
63
A
ARG
64
n
64
ARG
64
A
GLY
1
n
1
GLY
1
B
GLU
2
n
2
GLU
2
B
ASP
3
n
3
ASP
3
B
GLY
4
n
4
GLY
4
B
TYR
5
n
5
TYR
5
B
ILE
6
n
6
ILE
6
B
ALA
7
n
7
ALA
7
B
ASP
8
n
8
ASP
8
B
GLY
9
n
9
GLY
9
B
ASP
10
n
10
ASP
10
B
ASN
11
n
11
ASN
11
B
CYS
12
n
12
CYS
12
B
THR
13
n
13
THR
13
B
TYR
14
n
14
TYR
14
B
ILE
15
n
15
ILE
15
B
CYS
16
n
16
CYS
16
B
THR
17
n
17
THR
17
B
PHE
18
n
18
PHE
18
B
ASN
19
n
19
ASN
19
B
ASN
20
n
20
ASN
20
B
TYR
21
n
21
TYR
21
B
CYS
22
n
22
CYS
22
B
HIS
23
n
23
HIS
23
B
ALA
24
n
24
ALA
24
B
LEU
25
n
25
LEU
25
B
CYS
26
n
26
CYS
26
B
THR
27
n
27
THR
27
B
ASP
28
n
28
ASP
28
B
LYS
29
n
29
LYS
29
B
LYS
30
n
30
LYS
30
B
GLY
31
n
31
GLY
31
B
ASP
32
n
32
ASP
32
B
SER
33
n
33
SER
33
B
GLY
34
n
34
GLY
34
B
ALA
35
n
35
ALA
35
B
CYS
36
n
36
CYS
36
B
ASP
37
n
37
ASP
37
B
TRP
38
n
38
TRP
38
B
TRP
39
n
39
TRP
39
B
VAL
40
n
40
VAL
40
B
PRO
41
n
41
PRO
41
B
TYR
42
n
42
TYR
42
B
GLY
43
n
43
GLY
43
B
VAL
44
n
44
VAL
44
B
VAL
45
n
45
VAL
45
B
CYS
46
n
46
CYS
46
B
TRP
47
n
47
TRP
47
B
CYS
48
n
48
CYS
48
B
GLU
49
n
49
GLU
49
B
ASP
50
n
50
ASP
50
B
LEU
51
n
51
LEU
51
B
PRO
52
n
52
PRO
52
B
THR
53
n
53
THR
53
B
PRO
54
n
54
PRO
54
B
VAL
55
n
55
VAL
55
B
PRO
56
n
56
PRO
56
B
ILE
57
n
57
ILE
57
B
ARG
58
n
58
ARG
58
B
GLY
59
n
59
GLY
59
B
SER
60
n
60
SER
60
B
GLY
61
n
61
GLY
61
B
LYS
62
n
62
LYS
62
B
CYS
63
n
63
CYS
63
B
ARG
64
n
64
ARG
64
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLY
4
A
O
GLY
4
A
N
CYS
48
A
N
CYS
48
A
N
GLU
49
A
N
GLU
49
A
O
SER
33
A
O
SER
33
B
O
GLY
4
B
O
GLY
4
B
N
CYS
48
B
N
CYS
48
B
N
GLU
49
B
N
GLU
49
B
O
SER
33
B
O
SER
33
1
A
THR
17
-139.09
-43.63
1
B
THR
17
-145.22
-47.72
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
31.8
-5.27
0.00
-3.16
7.05
0.00
-1.78
0.276
0.018
0.201
0.212
0.201
2.20
14.92
286
71526
5176
5.5
87.7
RANDOM
453964.14
0.00
1
RESTRAINED
THROUGHOUT
0.0
0.0
FLAT MODEL
115.1
0.407
0.42
0.31
5.00
0.37
0.40
2.20
14.92
91
1071
0
0
980
0.006
1.3
24.0
0.89
0.351
0.065
0.354
2.34
33
562
6
5.5
62.0
24.1
2.2
15.0
1DQ7
71526
5166
-3
0.121
1
8.2
12.5
87.7
0.186
2.2
2.28
341
1.9
59.3
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
0.9
THREE-DIMENSIONAL STRUCTURE OF A NEUROTOXIN FROM RED SCORPION (BUTHUS TAMULAS) AT 2.2A RESOLUTION.
THREE-DIMENSIONAL STRUCTURE OF A NEUROTOXIN FROM RED SCORPION (BUTHUS TAMULUS) AT 2.2A RESOLUTION.
1
N
N
1
N
N
2
N
N
2
N
N
A
PHE
18
A
PHE
18
HELX_P
A
LYS
29
A
LYS
29
1
1
12
B
PHE
18
B
PHE
18
HELX_P
B
ASP
28
B
ASP
28
1
2
11
disulf
2.032
A
CYS
12
A
SG
CYS
12
1_555
A
CYS
63
A
SG
CYS
63
1_555
disulf
2.040
A
CYS
16
A
SG
CYS
16
1_555
A
CYS
36
A
SG
CYS
36
1_555
disulf
2.026
A
CYS
22
A
SG
CYS
22
1_555
A
CYS
46
A
SG
CYS
46
1_555
disulf
2.026
A
CYS
26
A
SG
CYS
26
1_555
A
CYS
48
A
SG
CYS
48
1_555
disulf
2.027
B
CYS
12
B
SG
CYS
12
1_555
B
CYS
63
B
SG
CYS
63
1_555
disulf
2.031
B
CYS
16
B
SG
CYS
16
1_555
B
CYS
36
B
SG
CYS
36
1_555
disulf
2.032
B
CYS
22
B
SG
CYS
22
1_555
B
CYS
46
B
SG
CYS
46
1_555
disulf
2.032
B
CYS
26
B
SG
CYS
26
1_555
B
CYS
48
B
SG
CYS
48
1_555
TOXIN
Red scorpion Neurotoxin, TOXIN
1DQ7
PDB
1
1DQ7
1
64
1DQ7
1
64
1DQ7
A
1
1
64
1
64
1DQ7
1
64
1DQ7
B
1
1
64
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
2
A
GLU
2
A
GLY
4
A
GLY
4
A
GLY
43
A
GLY
43
A
LEU
51
A
LEU
51
A
SER
33
A
SER
33
A
VAL
40
A
VAL
40
B
GLU
2
B
GLU
2
B
GLY
4
B
GLY
4
B
GLY
43
B
GLY
43
B
LEU
51
B
LEU
51
B
SER
33
B
SER
33
B
VAL
40
B
VAL
40
4
P 1 21 1