0.025265
0.000000
0.000000
0.000000
0.024225
0.000000
0.000000
0.000000
0.010122
0.00000
0.00000
0.00000
Liu, Y.
Chirino, A.J.
Misulovin, Z.
Leteux, C.
Feizi, T.
Nussenzweig, M.C.
Bjorkman, P.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
39.580
41.280
98.790
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Exp.Med.
JEMEAV
0774
0022-1007
191
1105
1116
10.1084/jem.191.7.1105
10748229
Crystal structure of the cysteine-rich domain of mannose receptor complexed with a sulfated carbohydrate ligand.
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
120
1
1
IMAGE PLATE
1998-10-01
RIGAKU RAXIS II
IMAGE PLATE
1998-05-31
RIGAKU RAXIS II
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
15558.486
MANNOSE RECEPTOR
CYSTEINE RICH DOMAIN
1
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
no
no
LDARQFLIYNEDHKRCVDALSAISVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSKTDWASVTLYACDSKSEYQK
WECKNDTLFGIKGTELYFNYGNRQEKNIKLYKGSGLWSRWKVYGTTDDLCSRGYE
LDARQFLIYNEDHKRCVDALSAISVQTATCNPEAESQKFRWVSDSQIMSVAFKLCLGVPSKTDWASVTLYACDSKSEYQK
WECKNDTLFGIKGTELYFNYGNRQEKNIKLYKGSGLWSRWKVYGTTDDLCSRGYE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
human
Homo
sample
MACROPHAGE
EPITHELIAL CELLS
10090
Mus musculus
9606
Homo sapiens
PIG
2
2.59
52.57
VAPOR DIFFUSION, HANGING DROP
6.5
PEG8000, ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
repository
Initial release
Version format compliance
Version format compliance
1
0
2000-05-10
1
1
2008-04-27
1
2
2011-07-13
RCSB
Y
RCSB
2000-01-04
REL
SO4
SULFATE ION
SO4
136
2
SO4
SO4
136
A
n
1
1
A
ASP
1
n
2
ASP
2
A
ALA
2
n
3
ALA
3
A
ARG
3
n
4
ARG
4
A
GLN
4
n
5
GLN
5
A
PHE
5
n
6
PHE
6
A
LEU
6
n
7
LEU
7
A
ILE
7
n
8
ILE
8
A
TYR
8
n
9
TYR
9
A
ASN
9
n
10
ASN
10
A
GLU
10
n
11
GLU
11
A
ASP
11
n
12
ASP
12
A
HIS
12
n
13
HIS
13
A
LYS
13
n
14
LYS
14
A
ARG
14
n
15
ARG
15
A
CYS
15
n
16
CYS
16
A
VAL
16
n
17
VAL
17
A
ASP
17
n
18
ASP
18
A
ALA
18
n
19
ALA
19
A
LEU
19
n
20
LEU
20
A
SER
20
n
21
SER
21
A
ALA
21
n
22
ALA
22
A
ILE
22
n
23
ILE
23
A
SER
23
n
24
SER
24
A
VAL
24
n
25
VAL
25
A
GLN
25
n
26
GLN
26
A
THR
26
n
27
THR
27
A
ALA
27
n
28
ALA
28
A
THR
28
n
29
THR
29
A
CYS
29
n
30
CYS
30
A
ASN
30
n
31
ASN
31
A
PRO
31
n
32
PRO
32
A
GLU
32
n
33
GLU
33
A
ALA
33
n
34
ALA
34
A
GLU
34
n
35
GLU
35
A
SER
35
n
36
SER
36
A
GLN
36
n
37
GLN
37
A
LYS
37
n
38
LYS
38
A
PHE
38
n
39
PHE
39
A
ARG
39
n
40
ARG
40
A
TRP
40
n
41
TRP
41
A
VAL
41
n
42
VAL
42
A
SER
42
n
43
SER
43
A
ASP
43
n
44
ASP
44
A
SER
44
n
45
SER
45
A
GLN
45
n
46
GLN
46
A
ILE
46
n
47
ILE
47
A
MET
47
n
48
MET
48
A
SER
48
n
49
SER
49
A
VAL
49
n
50
VAL
50
A
ALA
50
n
51
ALA
51
A
PHE
51
n
52
PHE
52
A
LYS
52
n
53
LYS
53
A
LEU
53
n
54
LEU
54
A
CYS
54
n
55
CYS
55
A
LEU
55
n
56
LEU
56
A
GLY
56
n
57
GLY
57
A
VAL
57
n
58
VAL
58
A
PRO
58
n
59
PRO
59
A
SER
59
n
60
SER
60
A
LYS
60
n
61
LYS
61
A
THR
61
n
62
THR
62
A
ASP
62
n
63
ASP
63
A
TRP
63
n
64
TRP
64
A
ALA
64
n
65
ALA
65
A
SER
65
n
66
SER
66
A
VAL
66
n
67
VAL
67
A
THR
67
n
68
THR
68
A
LEU
68
n
69
LEU
69
A
TYR
69
n
70
TYR
70
A
ALA
70
n
71
ALA
71
A
CYS
71
n
72
CYS
72
A
ASP
72
n
73
ASP
73
A
SER
73
n
74
SER
74
A
LYS
74
n
75
LYS
75
A
SER
75
n
76
SER
76
A
GLU
76
n
77
GLU
77
A
TYR
77
n
78
TYR
78
A
GLN
78
n
79
GLN
79
A
LYS
79
n
80
LYS
80
A
TRP
80
n
81
TRP
81
A
GLU
81
n
82
GLU
82
A
CYS
82
n
83
CYS
83
A
LYS
83
n
84
LYS
84
A
ASN
84
n
85
ASN
85
A
ASP
85
n
86
ASP
86
A
THR
86
n
87
THR
87
A
LEU
87
n
88
LEU
88
A
PHE
88
n
89
PHE
89
A
GLY
89
n
90
GLY
90
A
ILE
90
n
91
ILE
91
A
LYS
91
n
92
LYS
92
A
GLY
92
n
93
GLY
93
A
THR
93
n
94
THR
94
A
GLU
94
n
95
GLU
95
A
LEU
95
n
96
LEU
96
A
TYR
96
n
97
TYR
97
A
PHE
97
n
98
PHE
98
A
ASN
98
n
99
ASN
99
A
TYR
99
n
100
TYR
100
A
GLY
100
n
101
GLY
101
A
ASN
101
n
102
ASN
102
A
ARG
102
n
103
ARG
103
A
GLN
103
n
104
GLN
104
A
GLU
104
n
105
GLU
105
A
LYS
105
n
106
LYS
106
A
ASN
106
n
107
ASN
107
A
ILE
107
n
108
ILE
108
A
LYS
108
n
109
LYS
109
A
LEU
109
n
110
LEU
110
A
TYR
110
n
111
TYR
111
A
LYS
111
n
112
LYS
112
A
GLY
112
n
113
GLY
113
A
SER
113
n
114
SER
114
A
GLY
114
n
115
GLY
115
A
LEU
115
n
116
LEU
116
A
TRP
116
n
117
TRP
117
A
SER
117
n
118
SER
118
A
ARG
118
n
119
ARG
119
A
TRP
119
n
120
TRP
120
A
LYS
120
n
121
LYS
121
A
VAL
121
n
122
VAL
122
A
TYR
122
n
123
TYR
123
A
GLY
123
n
124
GLY
124
A
THR
124
n
125
THR
125
A
THR
125
n
126
THR
126
A
ASP
126
n
127
ASP
127
A
ASP
127
n
128
ASP
128
A
LEU
128
n
129
LEU
129
A
CYS
129
n
130
CYS
130
A
SER
130
n
131
SER
131
A
ARG
131
n
132
ARG
132
A
GLY
132
n
133
GLY
133
A
TYR
133
n
134
TYR
134
A
GLU
134
n
135
GLU
135
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ALA
28
A
O
ALA
28
A
N
CYS
16
A
N
CYS
16
A
N
VAL
17
A
N
VAL
17
A
O
ILE
8
A
O
ILE
8
A
O
TYR
9
A
O
TYR
9
A
N
LYS
121
A
N
LYS
121
A
O
ARG
40
A
O
ARG
40
A
N
MET
48
A
N
MET
48
A
N
SER
49
A
N
SER
49
A
O
LEU
54
A
O
LEU
54
A
N
GLY
57
A
N
GLY
57
A
O
THR
68
A
O
THR
68
A
N
GLU
82
A
N
GLU
82
A
O
GLY
90
A
O
GLY
90
A
O
ASN
99
A
O
ASN
99
A
N
LYS
109
A
N
LYS
109
1
A
CB
ALA
3
A
CB
ALA
3
0
Y
1
A
CD
LYS
14
A
CD
LYS
14
0
Y
1
A
CE
LYS
14
A
CE
LYS
14
0
Y
1
A
NZ
LYS
14
A
NZ
LYS
14
0
Y
1
A
OD1
ASP
44
A
OD1
ASP
44
0
Y
1
A
NZ
LYS
53
A
NZ
LYS
53
0
Y
1
A
CD
LYS
75
A
CD
LYS
75
0
Y
1
A
CE
LYS
75
A
CE
LYS
75
0
Y
1
A
NZ
LYS
75
A
NZ
LYS
75
0
Y
1
A
CB
ASN
85
A
CB
ASN
85
0
Y
1
A
CG
ASN
85
A
CG
ASN
85
0
Y
1
A
CB
ASP
86
A
CB
ASP
86
0
Y
1
A
CG
ASP
86
A
CG
ASP
86
0
Y
1
A
OD1
ASP
86
A
OD1
ASP
86
0
Y
1
A
OD2
ASP
86
A
OD2
ASP
86
0
Y
1
A
OE1
GLU
95
A
OE1
GLU
95
0
Y
1
A
OE2
GLU
95
A
OE2
GLU
95
0
Y
1
A
CD
GLN
104
A
CD
GLN
104
0
Y
1
A
OE1
GLN
104
A
OE1
GLN
104
0
Y
1
A
NE2
GLN
104
A
NE2
GLN
104
0
Y
1
A
CE
LYS
121
A
CE
LYS
121
0
Y
1
A
LEU
1
A
LEU
1
1
Y
1
-3.63
0.60
121.00
117.37
A
A
A
CB
CG
CD2
TYR
TYR
TYR
123
123
123
N
1
4.14
0.60
121.00
125.14
A
A
A
CB
CG
CD1
TYR
TYR
TYR
123
123
123
N
1
A
A
C
OXT
GLU
GLU
135
135
34.158
0.019
1.229
35.387
N
1
A
GLN
26
-122.89
-149.96
1
A
THR
68
-134.87
-150.60
1
A
LYS
84
-105.01
-150.31
1
A
GLN
104
58.82
14.45
0.208
0.196
0.198
0.198
1.7
25.0
1078
18132
18132
RANDOM
1
0.0
0.0
MIRAS
Engh & Huber
1.7
25.0
0
1090
5
0
1085
0.008
1.89
25.2
1.7
25.0
1DQG
152280
18536
0
0
0.055
1
21.0
8.2
98.1
0.205
1.70
1.77
1641
3.5
91.3
data reduction
DENZO
data scaling
SCALEPACK
phasing
SHARP
refinement
CNS
CRYSTAL STRUCTURE OF THE CYSTEINE RICH DOMAIN OF MANNOSE RECEPTOR
CRYSTAL STRUCTURE OF THE CYSTEINE RICH DOMAIN OF MANNOSE RECEPTOR
1
N
N
2
N
N
A
ALA
34
A
ALA
34
HELX_P
A
GLN
37
A
GLN
37
5
1
4
A
GLY
101
A
GLY
101
HELX_P
A
GLU
105
A
GLU
105
5
2
5
A
GLY
115
A
GLY
115
HELX_P
A
SER
118
A
SER
118
5
3
4
A
LEU
129
A
LEU
129
HELX_P
A
GLY
133
A
GLY
133
5
4
5
disulf
2.031
A
CYS
16
A
SG
CYS
16
1_555
A
CYS
30
A
SG
CYS
30
1_555
disulf
2.043
A
CYS
55
A
SG
CYS
55
1_555
A
CYS
72
A
SG
CYS
72
1_555
disulf
2.048
A
CYS
83
A
SG
CYS
83
1_555
A
CYS
130
A
SG
CYS
130
1_555
SUGAR BINDING PROTEIN
beta trefoil, multilectin receptor, pituitary hormones, sulfated carbohydrate, SUGAR BINDING PROTEIN
MANR1_MOUSE
UNP
1
Q61830
20
154
1DQG
1
135
Q61830
A
1
1
135
4
4
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
24
A
SER
24
A
ALA
28
A
ALA
28
A
ARG
15
A
ARG
15
A
SER
21
A
SER
21
A
ILE
8
A
ILE
8
A
ASN
10
A
ASN
10
A
LYS
121
A
LYS
121
A
VAL
122
A
VAL
122
A
PHE
39
A
PHE
39
A
TRP
41
A
TRP
41
A
ILE
47
A
ILE
47
A
SER
49
A
SER
49
A
LEU
54
A
LEU
54
A
GLY
57
A
GLY
57
A
THR
68
A
THR
68
A
TYR
70
A
TYR
70
A
TRP
81
A
TRP
81
A
CYS
83
A
CYS
83
A
PHE
89
A
PHE
89
A
ILE
91
A
ILE
91
A
TYR
97
A
TYR
97
A
ASN
99
A
ASN
99
A
LYS
109
A
LYS
109
A
TYR
111
A
TYR
111
BINDING SITE FOR RESIDUE SO4 A 136
Software
8
A
ASN
99
A
ASN
99
8
1_555
A
ASN
102
A
ASN
102
8
1_555
A
TYR
111
A
TYR
111
8
1_555
A
GLY
113
A
GLY
113
8
1_555
A
SER
114
A
SER
114
8
1_555
A
GLY
115
A
GLY
115
8
1_555
A
LEU
116
A
LEU
116
8
1_555
A
TRP
117
A
TRP
117
8
1_555
19
P 21 21 21