0.013349
0.000000
0.000000
0.000000
0.011101
0.000000
0.000000
0.000000
0.025458
0.00000
0.00000
0.00000
Mowbray, S.L.
Bjorkman, A.J.
Cole, L.B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
74.910
90.080
39.280
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C5 H10 O5
150.130
beta-D-ribopyranose
beta-D-ribose; D-ribose; ribose; RIBOSE(PYRANOSE FORM)
D-saccharide, beta linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
R
C
N
277
R
C
N
278
R
C
N
279
R
C
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
O
N
284
N
O
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
O
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
R
C
N
315
N
O
N
316
N
C
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
Y
337
N
C
N
338
N
O
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
N
356
N
C
N
357
N
C
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
Y
324
N
doub
Y
325
N
sing
Y
326
N
sing
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
269
30206
30211
7982928
Probing protein-protein interactions. The ribose-binding protein in bacterial transport and chemotaxis.
1994
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
225
155
The 1.7 Angstroms X-Ray Structure of the Periplasmic Ribose Receptor from Escherichia Coli
1992
US
Protein Sci.
PRCIEI
0795
0961-8368
1
1642
Functional Mapping of the Surface of Escherichia Coli Ribose-Binding Protein: Mutations which Affect Chemotaxis and Transport
1992
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
211
689
Preliminary X-Ray Data for the Periplasmic Ribose Receptor from Escherichia Coli
1990
10.2210/pdb1drj/pdb
pdb_00001drj
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
28607.564
D-RIBOSE-BINDING PROTEIN
1
man
polymer
150.130
beta-D-ribopyranose
1
man
non-polymer
18.015
water
147
nat
water
no
no
KDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQ
ANIPVITLDRQATKGEVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIARTSAARERGEGFQQAVAAHKFNVLASQ
PADFDRIKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDGTPDGEKAVNDGKLAATIAQLPDQI
GAKGVETADKVLKGEKVQAKYPVDLKLVVKQ
KDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQ
ANIPVITLDRQATKGEVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIARTSAARERGEGFQQAVAAHKFNVLASQ
PADFDRIKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDGTPDGEKAVNDGKLAATIAQLPDQI
GAKGVETADKVLKGEKVQAKYPVDLKLVVKQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
sample
562
Escherichia coli
BACTERIAL
2.32
46.88
pdbx_database_status
struct_conf
struct_conf_type
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_ref_seq_dif
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Version format compliance
Derived calculations
Other
Data collection
Database references
Derived calculations
Structure summary
Data collection
Database references
Structure summary
1
0
1995-01-26
1
1
2008-03-03
1
2
2011-07-13
1
3
2017-11-29
1
4
2020-07-29
1
5
2024-02-07
_pdbx_database_status.process_site
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_ref_seq_dif.details
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
DRibpb
b-D-ribopyranose
b-D-Ribp
Rib
Y
BNL
1994-09-23
REL
REL
RIP
beta-D-ribopyranose
HOH
water
RIP
1
2
RIP
RIP
272
A
HOH
1
3
HOH
HOH
273
A
HOH
2
3
HOH
HOH
274
A
HOH
3
3
HOH
HOH
275
A
HOH
7
3
HOH
HOH
276
A
HOH
8
3
HOH
HOH
277
A
HOH
9
3
HOH
HOH
278
A
HOH
10
3
HOH
HOH
279
A
HOH
11
3
HOH
HOH
280
A
HOH
12
3
HOH
HOH
281
A
HOH
13
3
HOH
HOH
282
A
HOH
14
3
HOH
HOH
283
A
HOH
15
3
HOH
HOH
284
A
HOH
16
3
HOH
HOH
285
A
HOH
18
3
HOH
HOH
286
A
HOH
19
3
HOH
HOH
287
A
HOH
20
3
HOH
HOH
288
A
HOH
21
3
HOH
HOH
289
A
HOH
22
3
HOH
HOH
290
A
HOH
24
3
HOH
HOH
291
A
HOH
25
3
HOH
HOH
292
A
HOH
26
3
HOH
HOH
293
A
HOH
27
3
HOH
HOH
294
A
HOH
28
3
HOH
HOH
295
A
HOH
29
3
HOH
HOH
296
A
HOH
31
3
HOH
HOH
297
A
HOH
32
3
HOH
HOH
298
A
HOH
33
3
HOH
HOH
299
A
HOH
34
3
HOH
HOH
300
A
HOH
36
3
HOH
HOH
301
A
HOH
37
3
HOH
HOH
302
A
HOH
38
3
HOH
HOH
303
A
HOH
39
3
HOH
HOH
304
A
HOH
40
3
HOH
HOH
305
A
HOH
41
3
HOH
HOH
306
A
HOH
42
3
HOH
HOH
307
A
HOH
44
3
HOH
HOH
308
A
HOH
45
3
HOH
HOH
309
A
HOH
48
3
HOH
HOH
310
A
HOH
49
3
HOH
HOH
311
A
HOH
50
3
HOH
HOH
312
A
HOH
51
3
HOH
HOH
313
A
HOH
52
3
HOH
HOH
314
A
HOH
53
3
HOH
HOH
315
A
HOH
54
3
HOH
HOH
316
A
HOH
55
3
HOH
HOH
317
A
HOH
56
3
HOH
HOH
318
A
HOH
57
3
HOH
HOH
319
A
HOH
60
3
HOH
HOH
320
A
HOH
61
3
HOH
HOH
321
A
HOH
62
3
HOH
HOH
322
A
HOH
65
3
HOH
HOH
323
A
HOH
66
3
HOH
HOH
324
A
HOH
67
3
HOH
HOH
325
A
HOH
68
3
HOH
HOH
326
A
HOH
69
3
HOH
HOH
327
A
HOH
71
3
HOH
HOH
328
A
HOH
73
3
HOH
HOH
329
A
HOH
74
3
HOH
HOH
330
A
HOH
75
3
HOH
HOH
331
A
HOH
76
3
HOH
HOH
332
A
HOH
77
3
HOH
HOH
333
A
HOH
79
3
HOH
HOH
334
A
HOH
80
3
HOH
HOH
335
A
HOH
81
3
HOH
HOH
336
A
HOH
82
3
HOH
HOH
337
A
HOH
83
3
HOH
HOH
338
A
HOH
84
3
HOH
HOH
339
A
HOH
85
3
HOH
HOH
340
A
HOH
86
3
HOH
HOH
341
A
HOH
87
3
HOH
HOH
342
A
HOH
88
3
HOH
HOH
343
A
HOH
89
3
HOH
HOH
344
A
HOH
90
3
HOH
HOH
345
A
HOH
91
3
HOH
HOH
346
A
HOH
92
3
HOH
HOH
347
A
HOH
93
3
HOH
HOH
348
A
HOH
94
3
HOH
HOH
349
A
HOH
95
3
HOH
HOH
350
A
HOH
96
3
HOH
HOH
351
A
HOH
97
3
HOH
HOH
352
A
HOH
98
3
HOH
HOH
353
A
HOH
99
3
HOH
HOH
354
A
HOH
100
3
HOH
HOH
355
A
HOH
102
3
HOH
HOH
356
A
HOH
103
3
HOH
HOH
357
A
HOH
104
3
HOH
HOH
358
A
HOH
105
3
HOH
HOH
359
A
HOH
107
3
HOH
HOH
360
A
HOH
108
3
HOH
HOH
361
A
HOH
109
3
HOH
HOH
362
A
HOH
110
3
HOH
HOH
363
A
HOH
111
3
HOH
HOH
364
A
HOH
112
3
HOH
HOH
365
A
HOH
113
3
HOH
HOH
366
A
HOH
115
3
HOH
HOH
367
A
HOH
116
3
HOH
HOH
368
A
HOH
117
3
HOH
HOH
369
A
HOH
118
3
HOH
HOH
370
A
HOH
119
3
HOH
HOH
371
A
HOH
121
3
HOH
HOH
372
A
HOH
122
3
HOH
HOH
373
A
HOH
123
3
HOH
HOH
374
A
HOH
124
3
HOH
HOH
375
A
HOH
125
3
HOH
HOH
376
A
HOH
126
3
HOH
HOH
377
A
HOH
127
3
HOH
HOH
378
A
HOH
129
3
HOH
HOH
379
A
HOH
130
3
HOH
HOH
380
A
HOH
132
3
HOH
HOH
381
A
HOH
133
3
HOH
HOH
382
A
HOH
134
3
HOH
HOH
383
A
HOH
136
3
HOH
HOH
384
A
HOH
139
3
HOH
HOH
385
A
HOH
140
3
HOH
HOH
386
A
HOH
142
3
HOH
HOH
387
A
HOH
144
3
HOH
HOH
388
A
HOH
145
3
HOH
HOH
389
A
HOH
146
3
HOH
HOH
390
A
HOH
148
3
HOH
HOH
391
A
HOH
149
3
HOH
HOH
392
A
HOH
150
3
HOH
HOH
393
A
HOH
152
3
HOH
HOH
394
A
HOH
155
3
HOH
HOH
395
A
HOH
157
3
HOH
HOH
396
A
HOH
158
3
HOH
HOH
397
A
HOH
159
3
HOH
HOH
398
A
HOH
162
3
HOH
HOH
399
A
HOH
164
3
HOH
HOH
400
A
HOH
165
3
HOH
HOH
401
A
HOH
166
3
HOH
HOH
402
A
HOH
167
3
HOH
HOH
403
A
HOH
172
3
HOH
HOH
404
A
HOH
173
3
HOH
HOH
405
A
HOH
175
3
HOH
HOH
406
A
HOH
176
3
HOH
HOH
407
A
HOH
178
3
HOH
HOH
408
A
HOH
181
3
HOH
HOH
409
A
HOH
182
3
HOH
HOH
410
A
HOH
183
3
HOH
HOH
411
A
HOH
184
3
HOH
HOH
412
A
HOH
186
3
HOH
HOH
413
A
HOH
188
3
HOH
HOH
414
A
HOH
190
3
HOH
HOH
415
A
HOH
191
3
HOH
HOH
416
A
HOH
192
3
HOH
HOH
417
A
HOH
194
3
HOH
HOH
418
A
HOH
195
3
HOH
HOH
419
A
LYS
1
n
1
LYS
1
A
ASP
2
n
2
ASP
2
A
THR
3
n
3
THR
3
A
ILE
4
n
4
ILE
4
A
ALA
5
n
5
ALA
5
A
LEU
6
n
6
LEU
6
A
VAL
7
n
7
VAL
7
A
VAL
8
n
8
VAL
8
A
SER
9
n
9
SER
9
A
THR
10
n
10
THR
10
A
LEU
11
n
11
LEU
11
A
ASN
12
n
12
ASN
12
A
ASN
13
n
13
ASN
13
A
PRO
14
n
14
PRO
14
A
PHE
15
n
15
PHE
15
A
PHE
16
n
16
PHE
16
A
VAL
17
n
17
VAL
17
A
SER
18
n
18
SER
18
A
LEU
19
n
19
LEU
19
A
LYS
20
n
20
LYS
20
A
ASP
21
n
21
ASP
21
A
GLY
22
n
22
GLY
22
A
ALA
23
n
23
ALA
23
A
GLN
24
n
24
GLN
24
A
LYS
25
n
25
LYS
25
A
GLU
26
n
26
GLU
26
A
ALA
27
n
27
ALA
27
A
ASP
28
n
28
ASP
28
A
LYS
29
n
29
LYS
29
A
LEU
30
n
30
LEU
30
A
GLY
31
n
31
GLY
31
A
TYR
32
n
32
TYR
32
A
ASN
33
n
33
ASN
33
A
LEU
34
n
34
LEU
34
A
VAL
35
n
35
VAL
35
A
VAL
36
n
36
VAL
36
A
LEU
37
n
37
LEU
37
A
ASP
38
n
38
ASP
38
A
SER
39
n
39
SER
39
A
GLN
40
n
40
GLN
40
A
ASN
41
n
41
ASN
41
A
ASN
42
n
42
ASN
42
A
PRO
43
n
43
PRO
43
A
ALA
44
n
44
ALA
44
A
LYS
45
n
45
LYS
45
A
GLU
46
n
46
GLU
46
A
LEU
47
n
47
LEU
47
A
ALA
48
n
48
ALA
48
A
ASN
49
n
49
ASN
49
A
VAL
50
n
50
VAL
50
A
GLN
51
n
51
GLN
51
A
ASP
52
n
52
ASP
52
A
LEU
53
n
53
LEU
53
A
THR
54
n
54
THR
54
A
VAL
55
n
55
VAL
55
A
ARG
56
n
56
ARG
56
A
GLY
57
n
57
GLY
57
A
THR
58
n
58
THR
58
A
LYS
59
n
59
LYS
59
A
ILE
60
n
60
ILE
60
A
LEU
61
n
61
LEU
61
A
LEU
62
n
62
LEU
62
A
ILE
63
n
63
ILE
63
A
ASN
64
n
64
ASN
64
A
PRO
65
n
65
PRO
65
A
THR
66
n
66
THR
66
A
ASP
67
n
67
ASP
67
A
SER
68
n
68
SER
68
A
ASP
69
n
69
ASP
69
A
ALA
70
n
70
ALA
70
A
VAL
71
n
71
VAL
71
A
GLY
72
n
72
GLY
72
A
ASN
73
n
73
ASN
73
A
ALA
74
n
74
ALA
74
A
VAL
75
n
75
VAL
75
A
LYS
76
n
76
LYS
76
A
MET
77
n
77
MET
77
A
ALA
78
n
78
ALA
78
A
ASN
79
n
79
ASN
79
A
GLN
80
n
80
GLN
80
A
ALA
81
n
81
ALA
81
A
ASN
82
n
82
ASN
82
A
ILE
83
n
83
ILE
83
A
PRO
84
n
84
PRO
84
A
VAL
85
n
85
VAL
85
A
ILE
86
n
86
ILE
86
A
THR
87
n
87
THR
87
A
LEU
88
n
88
LEU
88
A
ASP
89
n
89
ASP
89
A
ARG
90
n
90
ARG
90
A
GLN
91
n
91
GLN
91
A
ALA
92
n
92
ALA
92
A
THR
93
n
93
THR
93
A
LYS
94
n
94
LYS
94
A
GLY
95
n
95
GLY
95
A
GLU
96
n
96
GLU
96
A
VAL
97
n
97
VAL
97
A
VAL
98
n
98
VAL
98
A
SER
99
n
99
SER
99
A
HIS
100
n
100
HIS
100
A
ILE
101
n
101
ILE
101
A
ALA
102
n
102
ALA
102
A
SER
103
n
103
SER
103
A
ASP
104
n
104
ASP
104
A
ASN
105
n
105
ASN
105
A
VAL
106
n
106
VAL
106
A
LEU
107
n
107
LEU
107
A
GLY
108
n
108
GLY
108
A
GLY
109
n
109
GLY
109
A
LYS
110
n
110
LYS
110
A
ILE
111
n
111
ILE
111
A
ALA
112
n
112
ALA
112
A
GLY
113
n
113
GLY
113
A
ASP
114
n
114
ASP
114
A
TYR
115
n
115
TYR
115
A
ILE
116
n
116
ILE
116
A
ALA
117
n
117
ALA
117
A
LYS
118
n
118
LYS
118
A
LYS
119
n
119
LYS
119
A
ALA
120
n
120
ALA
120
A
GLY
121
n
121
GLY
121
A
GLU
122
n
122
GLU
122
A
GLY
123
n
123
GLY
123
A
ALA
124
n
124
ALA
124
A
LYS
125
n
125
LYS
125
A
VAL
126
n
126
VAL
126
A
ILE
127
n
127
ILE
127
A
GLU
128
n
128
GLU
128
A
LEU
129
n
129
LEU
129
A
GLN
130
n
130
GLN
130
A
GLY
131
n
131
GLY
131
A
ILE
132
n
132
ILE
132
A
ALA
133
n
133
ALA
133
A
ARG
134
n
134
ARG
134
A
THR
135
n
135
THR
135
A
SER
136
n
136
SER
136
A
ALA
137
n
137
ALA
137
A
ALA
138
n
138
ALA
138
A
ARG
139
n
139
ARG
139
A
GLU
140
n
140
GLU
140
A
ARG
141
n
141
ARG
141
A
GLY
142
n
142
GLY
142
A
GLU
143
n
143
GLU
143
A
GLY
144
n
144
GLY
144
A
PHE
145
n
145
PHE
145
A
GLN
146
n
146
GLN
146
A
GLN
147
n
147
GLN
147
A
ALA
148
n
148
ALA
148
A
VAL
149
n
149
VAL
149
A
ALA
150
n
150
ALA
150
A
ALA
151
n
151
ALA
151
A
HIS
152
n
152
HIS
152
A
LYS
153
n
153
LYS
153
A
PHE
154
n
154
PHE
154
A
ASN
155
n
155
ASN
155
A
VAL
156
n
156
VAL
156
A
LEU
157
n
157
LEU
157
A
ALA
158
n
158
ALA
158
A
SER
159
n
159
SER
159
A
GLN
160
n
160
GLN
160
A
PRO
161
n
161
PRO
161
A
ALA
162
n
162
ALA
162
A
ASP
163
n
163
ASP
163
A
PHE
164
n
164
PHE
164
A
ASP
165
n
165
ASP
165
A
ARG
166
n
166
ARG
166
A
ILE
167
n
167
ILE
167
A
LYS
168
n
168
LYS
168
A
GLY
169
n
169
GLY
169
A
LEU
170
n
170
LEU
170
A
ASN
171
n
171
ASN
171
A
VAL
172
n
172
VAL
172
A
MET
173
n
173
MET
173
A
GLN
174
n
174
GLN
174
A
ASN
175
n
175
ASN
175
A
LEU
176
n
176
LEU
176
A
LEU
177
n
177
LEU
177
A
THR
178
n
178
THR
178
A
ALA
179
n
179
ALA
179
A
HIS
180
n
180
HIS
180
A
PRO
181
n
181
PRO
181
A
ASP
182
n
182
ASP
182
A
VAL
183
n
183
VAL
183
A
GLN
184
n
184
GLN
184
A
ALA
185
n
185
ALA
185
A
VAL
186
n
186
VAL
186
A
PHE
187
n
187
PHE
187
A
ALA
188
n
188
ALA
188
A
GLN
189
n
189
GLN
189
A
ASN
190
n
190
ASN
190
A
ASP
191
n
191
ASP
191
A
GLU
192
n
192
GLU
192
A
MET
193
n
193
MET
193
A
ALA
194
n
194
ALA
194
A
LEU
195
n
195
LEU
195
A
GLY
196
n
196
GLY
196
A
ALA
197
n
197
ALA
197
A
LEU
198
n
198
LEU
198
A
ARG
199
n
199
ARG
199
A
ALA
200
n
200
ALA
200
A
LEU
201
n
201
LEU
201
A
GLN
202
n
202
GLN
202
A
THR
203
n
203
THR
203
A
ALA
204
n
204
ALA
204
A
GLY
205
n
205
GLY
205
A
LYS
206
n
206
LYS
206
A
SER
207
n
207
SER
207
A
ASP
208
n
208
ASP
208
A
VAL
209
n
209
VAL
209
A
MET
210
n
210
MET
210
A
VAL
211
n
211
VAL
211
A
VAL
212
n
212
VAL
212
A
GLY
213
n
213
GLY
213
A
PHE
214
n
214
PHE
214
A
ASP
215
n
215
ASP
215
A
GLY
216
n
216
GLY
216
A
THR
217
n
217
THR
217
A
PRO
218
n
218
PRO
218
A
ASP
219
n
219
ASP
219
A
GLY
220
n
220
GLY
220
A
GLU
221
n
221
GLU
221
A
LYS
222
n
222
LYS
222
A
ALA
223
n
223
ALA
223
A
VAL
224
n
224
VAL
224
A
ASN
225
n
225
ASN
225
A
ASP
226
n
226
ASP
226
A
GLY
227
n
227
GLY
227
A
LYS
228
n
228
LYS
228
A
LEU
229
n
229
LEU
229
A
ALA
230
n
230
ALA
230
A
ALA
231
n
231
ALA
231
A
THR
232
n
232
THR
232
A
ILE
233
n
233
ILE
233
A
ALA
234
n
234
ALA
234
A
GLN
235
n
235
GLN
235
A
LEU
236
n
236
LEU
236
A
PRO
237
n
237
PRO
237
A
ASP
238
n
238
ASP
238
A
GLN
239
n
239
GLN
239
A
ILE
240
n
240
ILE
240
A
GLY
241
n
241
GLY
241
A
ALA
242
n
242
ALA
242
A
LYS
243
n
243
LYS
243
A
GLY
244
n
244
GLY
244
A
VAL
245
n
245
VAL
245
A
GLU
246
n
246
GLU
246
A
THR
247
n
247
THR
247
A
ALA
248
n
248
ALA
248
A
ASP
249
n
249
ASP
249
A
LYS
250
n
250
LYS
250
A
VAL
251
n
251
VAL
251
A
LEU
252
n
252
LEU
252
A
LYS
253
n
253
LYS
253
A
GLY
254
n
254
GLY
254
A
GLU
255
n
255
GLU
255
A
LYS
256
n
256
LYS
256
A
VAL
257
n
257
VAL
257
A
GLN
258
n
258
GLN
258
A
ALA
259
n
259
ALA
259
A
LYS
260
n
260
LYS
260
A
TYR
261
n
261
TYR
261
A
PRO
262
n
262
PRO
262
A
VAL
263
n
263
VAL
263
A
ASP
264
n
264
ASP
264
A
LEU
265
n
265
LEU
265
A
LYS
266
n
266
LYS
266
A
LEU
267
n
267
LEU
267
A
VAL
268
n
268
VAL
268
A
VAL
269
n
269
VAL
269
A
LYS
270
n
270
LYS
270
A
GLN
271
n
271
GLN
271
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ASN
33
A
O
ASN
33
A
N
ILE
4
A
N
ILE
4
A
O
ALA
5
A
O
ALA
5
A
N
LEU
62
A
N
LEU
62
A
O
LEU
61
A
O
LEU
61
A
N
ILE
86
A
N
ILE
86
A
O
THR
87
A
O
THR
87
A
N
ILE
101
A
N
ILE
101
A
O
HIS
100
A
O
HIS
100
A
N
TYR
261
A
N
TYR
261
A
O
ASN
155
A
O
ASN
155
A
N
VAL
126
A
N
VAL
126
A
O
LYS
125
A
O
LYS
125
A
N
ALA
185
A
N
ALA
185
A
O
GLN
184
A
O
GLN
184
A
N
MET
210
A
N
MET
210
A
O
ASP
215
A
O
ASP
215
A
N
GLN
235
A
N
GLN
235
A
O
ALA
234
A
O
ALA
234
A
N
LYS
266
A
N
LYS
266
1
A
A
HZ3
H1
LYS
HOH
206
296
1.21
1
A
A
H
H1
ASP
HOH
38
305
1.26
1
A
A
HD21
HO4
ASN
RIP
13
272
1.31
1
A
A
HG1
HD1
THR
HIS
87
100
1.33
1
A
A
HZ3
H1
LYS
HOH
29
413
1.12
1_555
3_647
1
A
ASN
12
-87.04
48.94
1
A
ASN
13
-163.06
117.65
1
A
ASN
41
56.97
19.70
1
A
ASP
89
69.60
-42.45
1
A
ARG
134
-94.05
30.46
1
A
PHE
164
49.26
19.66
1
A
GLN
189
-65.33
2.45
1
A
ASP
208
-142.94
-17.25
1
A
ASP
215
123.71
-45.99
0.1760000
0.1760000
2.5
7.5
8119
1
1.0
2.5
7.5
441
2938
20
0
2477
0.008
1.04
23.6
0.86
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
PROBING PROTEIN-PROTEIN INTERACTIONS: THE RIBOSE-BINDING PROTEIN IN BACTERIAL TRANSPORT AND CHEMOTAXIS
1
N
N
2
N
N
3
N
N
A
PRO
14
A
PRO
14
HELX_P
A
LEU
30
A
LEU
30
1
A
17
A
PRO
43
A
PRO
43
HELX_P
A
LEU
53
A
LEU
53
1
B
11
A
ASP
67
A
ASP
67
HELX_P
ALPHA TURN
A
VAL
71
A
VAL
71
1
C'
5
A
GLY
72
A
GLY
72
HELX_P
A
GLN
80
A
GLN
80
1
C
9
A
ASN
105
A
ASN
105
HELX_P
A
ALA
120
A
ALA
120
1
D
16
A
SER
136
A
SER
136
HELX_P
A
HIS
152
A
HIS
152
1
E
17
A
ARG
166
A
ARG
166
HELX_P
A
ALA
179
A
ALA
179
1
F
14
A
ASP
191
A
ASP
191
HELX_P
A
ALA
204
A
ALA
204
1
G
14
A
PRO
218
A
PRO
218
HELX_P
A
ASN
225
A
ASN
225
1
H
8
A
PRO
237
A
PRO
237
HELX_P
A
LEU
252
A
LEU
252
1
I
16
SUGAR TRANSPORT
SUGAR TRANSPORT
RBSB_ECOLI
UNP
1
1
P02925
MNMKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTV
RGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKGEVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGT
SAARERGEGFQQAVAAHKFNVLASQPADFDRIKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFD
GTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVVKQ
26
296
1DRJ
1
271
P02925
A
1
1
271
1
GLY
conflict
ARG
134
1DRJ
A
P02925
UNP
159
134
6
6
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
A
ASN
33
A
ASN
33
A
ASP
38
A
ASP
38
A
THR
3
A
THR
3
A
VAL
8
A
VAL
8
A
ILE
60
A
ILE
60
A
ILE
63
A
ILE
63
A
VAL
85
A
VAL
85
A
LEU
88
A
LEU
88
A
SER
99
A
SER
99
A
SER
103
A
SER
103
A
LYS
260
A
LYS
260
A
VAL
263
A
VAL
263
A
ASN
155
A
ASN
155
A
PRO
161
A
PRO
161
A
LYS
125
A
LYS
125
A
GLN
130
A
GLN
130
A
GLN
184
A
GLN
184
A
ALA
188
A
ALA
188
A
MET
210
A
MET
210
A
ASP
215
A
ASP
215
A
ALA
231
A
ALA
231
A
GLN
235
A
GLN
235
A
LYS
266
A
LYS
266
A
VAL
268
A
VAL
268
Unknown
10
A
ASN
13
A
ASN
13
10
1_555
A
PHE
15
A
PHE
15
10
1_555
A
PHE
16
A
PHE
16
10
1_555
A
ASP
89
A
ASP
89
10
1_555
A
ARG
90
A
ARG
90
10
1_555
A
ARG
141
A
ARG
141
10
1_555
A
PHE
164
A
PHE
164
10
1_555
A
ASN
190
A
ASN
190
10
1_555
A
ASP
215
A
ASP
215
10
1_555
A
GLN
235
A
GLN
235
10
1_555
19
P 21 21 21