1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Lian, C.
Robinson, H.
Wang, A.H.-J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H11 N O2
117.146
D-VALINE
D-peptide linking
C6 H13 N O2
131.173
n
N-METHYLVALINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C16 H12 N2 O4
296.277
2-AMINO-1,9-DICARBONYL-4,6-DIMETHYL-10-DEHYDRO-PHENOXAZIN-3-ONE
PHENOXAZINE
non-polymer
C3 H7 N O2
89.093
n
SARCOSINE
peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
R
C
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
C
N
150
N
O
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
N
C
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
Y
202
N
C
N
203
N
C
N
204
N
O
Y
205
N
C
N
206
N
N
Y
207
N
C
N
208
N
O
Y
209
N
C
Y
210
N
O
Y
211
N
C
Y
212
N
C
Y
213
N
C
Y
214
N
C
N
215
N
C
N
216
N
O
Y
217
N
N
Y
218
N
C
Y
219
N
C
Y
220
N
C
Y
221
N
C
N
222
N
C
N
223
N
C
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
C
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
N
N
250
S
C
N
251
N
C
N
252
N
O
N
253
R
C
N
254
N
O
N
255
N
C
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
Y
207
N
doub
Y
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
Y
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
doub
Y
216
N
sing
Y
217
N
doub
N
218
N
sing
Y
219
N
sing
Y
220
N
sing
Y
221
N
doub
Y
222
N
sing
N
223
N
sing
Y
224
N
sing
N
225
N
sing
Y
226
N
doub
N
227
N
sing
N
228
N
sing
Y
229
N
sing
N
230
N
doub
N
231
N
sing
Y
232
N
doub
Y
233
N
sing
Y
234
N
sing
Y
235
N
doub
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
118
8791
10.1021/JA961631P
Structure of Actinomycin D Bound with (Gaagcttc)2 and (Gatgcttc)2 and its Binding to the (Cag)N:(Ctg)N Triplet Sequence by NMR Analysis
1996
10.2210/pdb1dsc/pdb
pdb_00001dsc
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
2426.617
DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
2
syn
polymer
1259.447
ACTINOMYCIN D
1
nat
polymer
DACTINOMYCIN
no
no
(DG)(DA)(DA)(DG)(DC)(DT)(DT)(DC)
GAAGCTTC
A,B
polydeoxyribonucleotide
no
yes
T(DVA)P(SAR)(MVA)(PXZ)T(DVA)P(SAR)(MVA)
TVPGVXTVPGV
C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1890
STREPTOMYCES ANTIBIOTICUS
-8.757
1
19
A
1
B
16
1.278
A_DG1:DC16_B
1
-6.202
-0.676
-0.567
-0.142
0.421
1
20
A
2
B
15
5.921
A_DA2:DT15_B
2
-16.668
0.566
-0.137
-0.082
-0.954
1
A
3
B
14
16.935
A_DA3:DT14_B
3
-5.943
-0.451
0.095
-0.036
20.092
1
19
A
4
B
13
8.960
A_DG4:DC13_B
4
16.848
-1.053
0.758
-0.171
-20.938
1
A
5
B
12
11.928
A_DC5:DG12_B
5
19.148
0.956
0.728
0.121
2.576
1
20
A
6
B
11
12.144
A_DT6:DA11_B
6
-9.457
-0.324
-0.198
-0.039
-0.484
1
20
A
7
B
10
5.829
A_DT7:DA10_B
7
-16.480
-0.548
-0.124
-0.053
8.847
1
19
A
8
B
9
1.233
A_DC8:DG9_B
8
-5.992
0.715
-0.565
-0.132
3.017
37.795
A
A
1
2
-4.080
B
B
16
15
3.004
-2.640
0.720
-0.844
AA_DG1DA2:DT15DC16_BB
1
-1.837
2.839
37.663
-0.990
-1.329
2.057
25.757
A
A
2
3
19.284
B
B
15
14
2.910
8.440
1.289
-1.982
AA_DA2DA3:DT14DT15_BB
2
-1.116
2.549
24.332
-6.295
-3.135
1.507
20.355
A
A
3
4
39.478
B
B
14
13
2.650
12.651
0.109
-0.615
AA_DA3DG4:DC13DT14_BB
3
-6.232
19.448
14.715
-5.956
-2.386
2.354
21.383
A
A
5
6
22.395
B
B
12
11
2.799
8.068
-0.319
-0.401
AA_DC5DT6:DA11DG12_BB
4
3.542
-9.834
19.503
-3.792
2.051
2.501
31.892
A
A
6
7
16.632
B
B
11
10
3.046
9.012
-0.657
-1.692
AA_DT6DT7:DA10DA11_BB
5
-2.397
4.423
30.532
-4.502
0.817
3.013
37.797
A
A
7
8
-4.112
B
B
10
9
3.002
-2.660
-0.720
-0.847
AA_DT7DC8:DG9DA10_BB
6
1.937
-2.993
37.658
-0.992
1.341
atom_site
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_validate_polymer_linkage
struct_conn
repository
Initial release
Version format compliance
Version format compliance
Atomic model
Database references
Derived calculations
Non-polymer description
Structure summary
Other
Advisory
Atomic model
Data collection
Database references
Derived calculations
Other
1
0
1996-12-07
1
1
2011-06-14
1
2
2011-07-13
1
3
2011-07-27
1
4
2012-12-12
2
0
2023-11-15
_atom_site.auth_atom_id
_atom_site.label_atom_id
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr2_label_atom_id
CRYSTAL STRUCTURE OF ACTINOMYCIN Z3
CRYSTAL STRUCTURE OF N8-ACTINOMYCIN D COMPLEXED WITH D(GAAGCTTC)2
CRYSTAL STRUCTURE OF 7-AMINOACTINOMYCIN D COMPLEXED WITH NON-COMPLEMENTARY DNA
CRYSTAL STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (CGATCGATCG)2
CRYSTAL STRUCTURE OF ACTINOMYCIN D
SOLUTION STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (AAGCGCTT)2
CRYSTAL STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (GAAGCTTC)2
CRYSTAL STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (GAAGCTTC)2
SOLUTION STRUCTURE OF ACTNIOMYCIN D COMPLEXED WITH MISMATCHED DNA (GTCACCGAC)
CRYSTAL STRUCTURE OF F8-ACTINOMYCIN D COMPLEXED WITH DNA (GAAGCTTC)2
SOLUTION STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (GATGCTTC)2
CRYSTAL STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (ATGCTGCAT)2
CRYSTAL STRUCTURE OF 7-AMINO-ACTINOMYCIN D COMPLEXED WITH A NON-COMPLEMENTARY DNA (TTAGT)2
SOLUTIOM STRUCTURE OF ACTINOMYCIN D COMPLEXED WITH DNA (CCGTTTTGTGG)2
CRYSTAL STRUCTURE OF ACTINOMYCIN X2
Y
BNL
1996-08-10
REL
REL
ACTINOMYCIN D IS A BICYCLIC PEPTIDE, A MEMBER OF THE
ACTINOMYCIN FAMILY.
HERE, ACTINOMYCIN D IS REPRESENTED BY THE SEQUENCE (SEQRES)
Antibiotic
ACTINOMYCIN D CONSISTS OF TWO PENTAMER
RINGS LINKED BY THE CHROMOPHORE (PXZ)
Actinomycin D
Polypeptide
MINIMIZED AVERAGE
1
NOESY
TOCSY
7.0
275
K
NOE-RMD
BRUNGER
refinement
X-PLOR
structure solution
X-PLOR
structure solution
SPEDREF
500
Varian
VXR 500
DG
1
n
1
DG
1
A
DA
2
n
2
DA
2
A
DA
3
n
3
DA
3
A
DG
4
n
4
DG
4
A
DC
5
n
5
DC
5
A
DT
6
n
6
DT
6
A
DT
7
n
7
DT
7
A
DC
8
n
8
DC
8
A
DG
9
n
1
DG
9
B
DA
10
n
2
DA
10
B
DA
11
n
3
DA
11
B
DG
12
n
4
DG
12
B
DC
13
n
5
DC
13
B
DT
14
n
6
DT
14
B
DT
15
n
7
DT
15
B
DC
16
n
8
DC
16
B
THR
1
n
1
THR
1
C
DVA
2
n
2
DVA
2
C
PRO
3
n
3
PRO
3
C
SAR
4
n
4
SAR
4
C
MVA
5
n
5
MVA
5
C
PXZ
6
n
6
PXZ
6
C
THR
7
n
7
THR
7
C
DVA
8
n
8
DVA
8
C
PRO
9
n
9
PRO
9
C
SAR
10
n
10
SAR
10
C
MVA
11
n
11
MVA
11
C
author_defined_assembly
3
trimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
DC
8
0.081
SIDE CHAIN
1
B
DC
16
0.081
SIDE CHAIN
1
3.41
0.30
108.30
111.71
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
1
8.59
0.30
108.30
116.89
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
1
-5.18
0.80
105.90
100.72
A
A
A
O4'
C1'
C2'
DA
DA
DA
3
3
3
N
1
9.64
1.20
119.70
129.34
A
A
A
C3'
O3'
P
DA
DA
DG
3
3
4
Y
1
6.98
1.10
109.80
116.78
A
A
A
C5'
C4'
O4'
DG
DG
DG
4
4
4
N
1
-6.61
0.80
105.90
99.29
A
A
A
O4'
C1'
C2'
DG
DG
DG
4
4
4
N
1
8.36
0.30
108.30
116.66
A
A
A
O4'
C1'
N1
DC
DC
DC
5
5
5
N
1
-3.16
0.40
104.50
101.34
A
A
A
O4'
C4'
C3'
DT
DT
DT
6
6
6
N
1
9.23
1.10
109.80
119.03
A
A
A
C5'
C4'
O4'
DT
DT
DT
6
6
6
N
1
-8.23
0.80
105.90
97.67
A
A
A
O4'
C1'
C2'
DT
DT
DT
6
6
6
N
1
8.70
0.30
108.30
117.00
A
A
A
O4'
C1'
N1
DT
DT
DT
6
6
6
N
1
3.36
0.30
108.30
111.66
B
B
B
O4'
C1'
N9
DG
DG
DG
9
9
9
N
1
8.74
0.30
108.30
117.04
B
B
B
O4'
C1'
N9
DA
DA
DA
10
10
10
N
1
-4.85
0.80
105.90
101.05
B
B
B
O4'
C1'
C2'
DA
DA
DA
11
11
11
N
1
3.69
0.30
108.30
111.99
B
B
B
O4'
C1'
N9
DA
DA
DA
11
11
11
N
1
12.33
1.20
119.70
132.03
B
B
B
C3'
O3'
P
DA
DA
DG
11
11
12
Y
1
-2.44
0.40
106.40
103.96
B
B
B
C8
N9
C4
DG
DG
DG
12
12
12
N
1
6.08
0.30
108.30
114.38
B
B
B
O4'
C1'
N1
DC
DC
DC
13
13
13
N
1
3.89
0.30
108.30
112.19
B
B
B
O4'
C1'
N1
DT
DT
DT
14
14
14
N
1
-4.32
0.60
122.90
118.58
B
B
B
C6
C5
C7
DT
DT
DT
14
14
14
N
1
A
A
C5'
C4'
DG
DG
1
1
0.046
0.007
1.512
1.558
N
1
A
A
C5
C7
DT
DT
6
6
0.039
0.006
1.496
1.535
N
1
B
B
C5'
C4'
DG
DG
9
9
0.048
0.007
1.512
1.560
N
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
NMR STUDY OF DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3') SELF-COMPLEMENTARY DUPLEX COMPLEXED WITH ACTINOMYCIN D, MINIMIZED AVERAGE STRUCTURE
1
N
N
1
N
N
2
N
N
covale
1.304
both
C
THR
1
C
C
THR
1
1_555
C
DVA
2
C
N
DVA
2
1_555
covale
1.329
one
C
THR
1
C
OG1
THR
1
1_555
C
MVA
5
C
C
MVA
5
1_555
covale
1.307
one
C
THR
1
C
N
THR
1
1_555
C
PXZ
6
C
C0
PXZ
6
1_555
covale
1.307
both
C
DVA
2
C
C
DVA
2
1_555
C
PRO
3
C
N
PRO
3
1_555
covale
1.303
both
C
PRO
3
C
C
PRO
3
1_555
C
SAR
4
C
N
SAR
4
1_555
covale
1.319
both
C
SAR
4
C
C
SAR
4
1_555
C
MVA
5
C
N
MVA
5
1_555
covale
1.299
one
C
PXZ
6
C
C0'
PXZ
6
1_555
C
THR
7
C
N
THR
7
1_555
covale
1.297
both
C
THR
7
C
C
THR
7
1_555
C
DVA
8
C
N
DVA
8
1_555
covale
1.314
one
C
THR
7
C
OG1
THR
7
1_555
C
MVA
11
C
C
MVA
11
1_555
covale
1.303
both
C
DVA
8
C
C
DVA
8
1_555
C
PRO
9
C
N
PRO
9
1_555
covale
1.306
both
C
PRO
9
C
C
PRO
9
1_555
C
SAR
10
C
N
SAR
10
1_555
covale
1.319
both
C
SAR
10
C
C
SAR
10
1_555
C
MVA
11
C
N
MVA
11
1_555
hydrog
WATSON-CRICK
A
DG
1
A
N1
DG
1
1_555
B
DC
16
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
1
A
N2
DG
1
1_555
B
DC
16
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
1
A
O6
DG
1
1_555
B
DC
16
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
A
DA
2
A
N1
DA
2
1_555
B
DT
15
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
2
A
N6
DA
2
1_555
B
DT
15
B
O4
DT
7
1_555
hydrog
DA-DT PAIR
A
DA
3
A
N1
DA
3
1_555
B
DT
14
B
N3
DT
6
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
B
DC
13
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
B
DC
13
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
B
DC
13
B
N4
DC
5
1_555
hydrog
DC-DG PAIR
A
DC
5
A
O2
DC
5
1_555
B
DG
12
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
DT
6
A
N3
DT
6
1_555
B
DA
11
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
DT
6
A
O4
DT
6
1_555
B
DA
11
B
N6
DA
3
1_555
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
7
1_555
B
DA
10
B
N1
DA
2
1_555
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
7
1_555
B
DA
10
B
N6
DA
2
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N3
DC
8
1_555
B
DG
9
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N4
DC
8
1_555
B
DG
9
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
8
A
O2
DC
8
1_555
B
DG
9
B
N2
DG
1
1_555
DNA/ANTIBIOTIC
ACTINOMYCIN D, DACTINOMYCIN, ANTIBIOTIC, ANTI CANCER, ANTITUMOR, CHROMOPHORE, DEPSIPEPTIDE, DNA-ANTIBIOTIC COMPLEX
C
DVA
2
C
DVA
2
1
C
PRO
3
C
PRO
3
28.91
C
PRO
3
C
PRO
3
1
C
SAR
4
C
SAR
4
-0.76
C
DVA
8
C
DVA
8
1
C
PRO
9
C
PRO
9
19.63
C
PRO
9
C
PRO
9
1
C
SAR
10
C
SAR
10
0.46
1DSC
PDB
1
1DSC
NOR00228
NOR
2
NOR00228
1
8
1DSC
1
8
1DSC
A
1
1
8
9
16
1DSC
9
16
1DSC
B
1
1
8
1
11
1DSC
1
11
NOR00228
C
2
1
11
BINDING SITE FOR CHAIN C OF ACTINOMYCIN D
Software
9
A
DA
3
A
DA
3
9
1_555
A
DG
4
A
DG
4
9
1_555
A
DC
5
A
DC
5
9
1_555
A
DT
6
A
DT
6
9
1_555
A
DT
7
A
DT
7
9
1_555
B
DA
11
B
DA
3
9
1_555
B
DG
12
B
DG
4
9
1_555
B
DC
13
B
DC
5
9
1_555
B
DT
14
B
DT
6
9
1_555
1
P 1