1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Schnell, J.R.
Ketchem, R.R.
Boger, D.L.
Chazin, W.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C22 H19 N3 O4
389.404
4-HYDROXY-6-(1H-INDOLE-2-CARBONYL)-8-METHYL-3,6,7,8-TETRAHYDRO-3,6-DIAZA-AS-INDACENE-2-CARBOXYLIC ACID METHYL ESTER
(+)DUOCARMYCIN SA-INDOLE
non-polymer
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
121
5645
5652
10.1021/ja983556j
-1
Binding-Induced Activation of DNA Alkylation by Duocarmycin SA: Insights from the Structure of an Indole Derivative-DNA Adduct
1999
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
272
237
High Resolution Solution Structure of a DNA Duplex Alkylated by the Antitumor Agent Duocarmycin Sa
1997
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
119
4977
Duocarmycin Sa Shortened, Simplified, and Extended Agents: A Systematic Examination of the Role of the DNA Binding Subunit
1997
10.2210/pdb1dsi/pdb
pdb_00001dsi
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
MINOR GROOVE BOUND DUOCARMYCIN SA-INDOLE
3357.223
DNA (5'-D(*GP*AP*CP*TP*AP*AP*TP*TP*GP*AP*C)-3')
1
syn
polymer
MINOR GROOVE BOUND DUOCARMYCIN SA-INDOLE
3348.209
DNA (5'-D(*GP*TP*CP*AP*AP*TP*TP*AP*GP*TP*C)-3')
1
syn
polymer
389.404
4-HYDROXY-6-(1H-INDOLE-2-CARBONYL)-8-METHYL-3,6,7,8-TETRAHYDRO-3,6-DIAZA-AS-INDACENE-2-CARBOXYLIC ACID METHYL ESTER
1
syn
non-polymer
no
no
(DG)(DA)(DC)(DT)(DA)(DA)(DT)(DT)(DG)(DA)(DC)
GACTAATTGAC
A
polydeoxyribonucleotide
no
no
(DG)(DT)(DC)(DA)(DA)(DT)(DT)(DA)(DG)(DT)(DC)
GTCAATTAGTC
B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
4.239
1
19
A
1
B
22
-2.464
A_DG1:DC22_B
1
-11.517
-0.458
0.371
-0.260
-2.569
1
20
A
2
B
21
2.240
A_DA2:DT21_B
2
-17.189
-0.069
0.119
-0.167
-19.435
1
19
A
3
B
20
-1.433
A_DC3:DG20_B
3
-19.749
0.525
0.410
-0.270
-15.985
1
20
A
4
B
19
-0.022
A_DT4:DA19_B
4
-5.490
0.065
0.316
-0.134
-8.803
1
20
A
5
B
18
1.537
A_DA5:DT18_B
5
-5.971
0.217
-0.176
-0.112
2.640
1
20
A
6
B
17
-1.842
A_DA6:DT17_B
6
-12.886
0.096
0.499
-0.162
-0.993
1
20
A
7
B
16
-6.259
A_DT7:DA16_B
7
-15.395
-0.086
0.392
-0.175
4.858
1
20
A
8
B
15
-4.424
A_DT8:DA15_B
8
-16.086
-0.064
0.066
-0.150
20.004
1
19
A
9
B
14
-2.258
A_DG9:DC14_B
9
-8.151
-0.476
0.481
-0.239
19.074
1
20
A
10
B
13
-0.573
A_DA10:DT13_B
10
-14.602
-0.017
0.370
-0.136
13.439
1
19
A
11
B
12
-2.634
A_DC11:DG12_B
11
-14.997
0.503
0.142
-0.259
3.279
43.164
A
A
1
2
-1.219
B
B
22
21
3.286
-0.896
-0.299
-0.959
AA_DG1DA2:DT21DC22_BB
1
2.799
-3.807
43.069
-1.215
0.683
3.580
44.322
A
A
2
3
-6.512
B
B
21
20
3.437
-4.889
-1.225
-0.291
AA_DA2DC3:DG20DT21_BB
2
-6.109
8.137
43.660
0.106
1.010
3.121
36.741
A
A
3
4
-2.422
B
B
20
19
3.068
-1.526
1.040
-0.321
AA_DC3DT4:DA19DG20_BB
3
1.658
-2.631
36.674
-0.313
-1.437
2.370
24.060
A
A
4
5
24.275
B
B
19
18
2.932
9.769
0.010
-0.651
AA_DT4DA5:DT18DA19_BB
4
4.551
-11.308
21.543
-4.252
1.230
2.909
42.832
A
A
5
6
-11.542
B
B
18
17
2.905
-8.335
-0.817
0.231
AA_DA5DA6:DT17DT18_BB
5
-7.902
10.943
41.333
1.070
0.404
3.302
33.460
A
A
6
7
-3.586
B
B
17
16
3.198
-2.063
-0.881
-1.114
AA_DA6DT7:DA16DT17_BB
6
-1.874
3.259
33.347
-1.596
1.223
2.936
32.490
A
A
7
8
-1.708
B
B
16
15
2.916
-0.955
0.009
-0.777
AA_DT7DT8:DA15DA16_BB
7
1.125
-2.011
32.457
-1.239
0.160
2.739
33.519
A
A
8
9
17.249
B
B
15
14
2.763
9.802
0.124
0.370
AA_DT8DG9:DC14DA15_BB
8
-2.314
4.073
32.011
-0.747
-0.544
3.128
38.242
A
A
9
10
1.119
B
B
14
13
3.130
0.733
-0.425
-0.146
AA_DG9DA10:DT13DC14_BB
9
-0.092
0.141
38.235
-0.311
0.638
3.356
43.509
A
A
10
11
-3.445
B
B
13
12
3.317
-2.552
0.775
-1.143
AA_DA10DC11:DG12DT13_BB
10
-1.100
1.484
43.424
-1.290
-1.153
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
1998-08-05
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
RCSB
1998-07-29
REL
DSI
4-HYDROXY-6-(1H-INDOLE-2-CARBONYL)-8-METHYL-3,6,7,8-TETRAHYDRO-3,6-DIAZA-AS-INDACENE-2-CARBOXYLIC ACID METHYL ESTER
THE STRUCTURE WAS DETERMINED USING HOMONUCLEAR 1H NMR DATA. RESONANCE
ASSIGNMENTS WERE AIDED BY A 1H - 13C HSQC EXPERIMENT PERFORMED AT NATURAL
ISOTOPE ABUNDANCE.
LOWEST RESTRAINT VIOLATIONS
40
20
NOESY
COSY
TOCSY
2Q
P.E. COSY
1H-13C HSQC
1D 31P
150mM
7.0
300
K
REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.
NAB TO GENERATE A FAMILY OF CONFOMRERS THAT SAMPLE A WIDE RANGE OF
CONFORMATIONAL SPACE. RESTRAINED MOLECULAR DYNAMICS TO GENERATE A RANGE OF
STARTING STRUCTURES FOR DSI. PAIRS OF DNA AND DSI STRUCTURES WERE THEN DOCKED
AND ITERATIVELY REFINED BY A SERIES OF RESTRAINED MOLECULAR DYNAMICS
CALCULATIONS.
1
PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM, FERGUSON,SEIBEL,SINGH,WEINER,KOLLMAN
refinement
Amber
5.1
structure solution
Felix
97
structure solution
NAB
2.1
structure solution
MARDIGRAS
5.21
structure solution
Amber
5.1
600
Bruker
AMX600
DSI
23
3
DSI
DSI
23
B
G
1
n
1
DG
1
A
A
2
n
2
DA
2
A
C
3
n
3
DC
3
A
T
4
n
4
DT
4
A
A
5
n
5
DA
5
A
A
6
n
6
DA
6
A
T
7
n
7
DT
7
A
T
8
n
8
DT
8
A
G
9
n
9
DG
9
A
A
10
n
10
DA
10
A
C
11
n
11
DC
11
A
G
12
n
1
DG
12
B
T
13
n
2
DT
13
B
C
14
n
3
DC
14
B
A
15
n
4
DA
15
B
A
16
n
5
DA
16
B
T
17
n
6
DT
17
B
T
18
n
7
DT
18
B
A
19
n
8
DA
19
B
G
20
n
9
DG
20
B
T
21
n
10
DT
21
B
C
22
n
11
DC
22
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
DA
2
0.096
SIDE CHAIN
1
A
DA
6
0.097
SIDE CHAIN
1
A
DT
7
0.067
SIDE CHAIN
1
A
DT
8
0.062
SIDE CHAIN
1
B
DT
13
0.089
SIDE CHAIN
1
B
DC
14
0.068
SIDE CHAIN
1
B
DA
19
0.106
SIDE CHAIN
1
B
DG
20
0.088
SIDE CHAIN
1
B
DT
21
0.058
SIDE CHAIN
1
B
DC
22
0.072
SIDE CHAIN
2
A
DA
2
0.083
SIDE CHAIN
2
A
DA
6
0.121
SIDE CHAIN
2
A
DT
7
0.061
SIDE CHAIN
2
A
DT
8
0.079
SIDE CHAIN
2
A
DG
9
0.067
SIDE CHAIN
2
B
DT
13
0.089
SIDE CHAIN
2
B
DC
14
0.068
SIDE CHAIN
2
B
DT
17
0.063
SIDE CHAIN
2
B
DA
19
0.098
SIDE CHAIN
2
B
DG
20
0.080
SIDE CHAIN
3
A
DA
2
0.096
SIDE CHAIN
3
A
DA
6
0.108
SIDE CHAIN
3
A
DT
7
0.067
SIDE CHAIN
3
A
DT
8
0.084
SIDE CHAIN
3
A
DG
9
0.060
SIDE CHAIN
3
B
DT
13
0.092
SIDE CHAIN
3
B
DC
14
0.068
SIDE CHAIN
3
B
DA
19
0.090
SIDE CHAIN
3
B
DG
20
0.089
SIDE CHAIN
4
A
DG
1
0.055
SIDE CHAIN
4
A
DA
2
0.097
SIDE CHAIN
4
A
DA
6
0.105
SIDE CHAIN
4
A
DT
8
0.082
SIDE CHAIN
4
A
DG
9
0.075
SIDE CHAIN
4
B
DT
13
0.077
SIDE CHAIN
4
B
DC
14
0.064
SIDE CHAIN
4
B
DA
19
0.101
SIDE CHAIN
4
B
DG
20
0.100
SIDE CHAIN
4
B
DT
21
0.062
SIDE CHAIN
5
A
DA
2
0.088
SIDE CHAIN
5
A
DA
6
0.104
SIDE CHAIN
5
A
DT
7
0.077
SIDE CHAIN
5
A
DT
8
0.070
SIDE CHAIN
5
B
DT
13
0.080
SIDE CHAIN
5
B
DC
14
0.075
SIDE CHAIN
5
B
DA
19
0.108
SIDE CHAIN
5
B
DG
20
0.079
SIDE CHAIN
5
B
DT
21
0.070
SIDE CHAIN
6
A
DA
2
0.078
SIDE CHAIN
6
A
DA
6
0.111
SIDE CHAIN
6
A
DT
7
0.077
SIDE CHAIN
6
A
DT
8
0.072
SIDE CHAIN
6
B
DT
13
0.083
SIDE CHAIN
6
B
DC
14
0.070
SIDE CHAIN
6
B
DA
19
0.105
SIDE CHAIN
6
B
DG
20
0.076
SIDE CHAIN
6
B
DT
21
0.064
SIDE CHAIN
7
A
DG
1
0.053
SIDE CHAIN
7
A
DA
2
0.102
SIDE CHAIN
7
A
DA
6
0.112
SIDE CHAIN
7
A
DT
7
0.060
SIDE CHAIN
7
A
DT
8
0.079
SIDE CHAIN
7
A
DG
9
0.056
SIDE CHAIN
7
B
DT
13
0.076
SIDE CHAIN
7
B
DC
14
0.064
SIDE CHAIN
7
B
DA
19
0.095
SIDE CHAIN
7
B
DG
20
0.089
SIDE CHAIN
7
B
DT
21
0.065
SIDE CHAIN
7
B
DC
22
0.072
SIDE CHAIN
8
A
DA
2
0.086
SIDE CHAIN
8
A
DC
3
0.064
SIDE CHAIN
8
A
DT
4
0.064
SIDE CHAIN
8
A
DA
6
0.104
SIDE CHAIN
8
A
DT
7
0.065
SIDE CHAIN
8
A
DT
8
0.073
SIDE CHAIN
8
B
DT
13
0.085
SIDE CHAIN
8
B
DC
14
0.069
SIDE CHAIN
8
B
DA
15
0.050
SIDE CHAIN
8
B
DA
19
0.100
SIDE CHAIN
8
B
DG
20
0.072
SIDE CHAIN
9
A
DG
1
0.054
SIDE CHAIN
9
A
DA
2
0.098
SIDE CHAIN
9
A
DA
6
0.100
SIDE CHAIN
9
A
DT
7
0.071
SIDE CHAIN
9
A
DT
8
0.082
SIDE CHAIN
9
B
DT
13
0.079
SIDE CHAIN
9
B
DC
14
0.069
SIDE CHAIN
9
B
DA
19
0.097
SIDE CHAIN
9
B
DG
20
0.081
SIDE CHAIN
9
B
DC
22
0.064
SIDE CHAIN
10
A
DA
2
0.102
SIDE CHAIN
10
A
DA
6
0.124
SIDE CHAIN
10
A
DT
7
0.074
SIDE CHAIN
10
A
DT
8
0.072
SIDE CHAIN
10
B
DT
13
0.088
SIDE CHAIN
10
B
DC
14
0.073
SIDE CHAIN
10
B
DA
19
0.098
SIDE CHAIN
10
B
DG
20
0.094
SIDE CHAIN
10
B
DT
21
0.066
SIDE CHAIN
11
A
DG
1
0.053
SIDE CHAIN
11
A
DA
2
0.101
SIDE CHAIN
11
A
DA
6
0.107
SIDE CHAIN
11
A
DT
8
0.078
SIDE CHAIN
11
A
DG
9
0.065
SIDE CHAIN
11
B
DT
13
0.077
SIDE CHAIN
11
B
DC
14
0.060
SIDE CHAIN
11
B
DA
15
0.049
SIDE CHAIN
11
B
DA
19
0.095
SIDE CHAIN
11
B
DG
20
0.095
SIDE CHAIN
12
A
DG
1
0.060
SIDE CHAIN
12
A
DC
3
0.066
SIDE CHAIN
12
A
DA
6
0.113
SIDE CHAIN
12
A
DT
7
0.062
SIDE CHAIN
12
A
DT
8
0.083
SIDE CHAIN
12
A
DG
9
0.054
SIDE CHAIN
12
B
DT
13
0.079
SIDE CHAIN
12
B
DA
19
0.090
SIDE CHAIN
12
B
DG
20
0.111
SIDE CHAIN
12
B
DT
21
0.063
SIDE CHAIN
13
A
DG
1
0.053
SIDE CHAIN
13
A
DA
2
0.052
SIDE CHAIN
13
A
DC
3
0.065
SIDE CHAIN
13
A
DA
6
0.103
SIDE CHAIN
13
A
DT
8
0.077
SIDE CHAIN
13
A
DG
9
0.055
SIDE CHAIN
13
B
DT
13
0.065
SIDE CHAIN
13
B
DC
14
0.062
SIDE CHAIN
13
B
DA
15
0.051
SIDE CHAIN
13
B
DA
19
0.093
SIDE CHAIN
13
B
DG
20
0.096
SIDE CHAIN
14
A
DA
2
0.105
SIDE CHAIN
14
A
DC
3
0.071
SIDE CHAIN
14
A
DT
4
0.064
SIDE CHAIN
14
A
DA
6
0.112
SIDE CHAIN
14
A
DT
7
0.063
SIDE CHAIN
14
A
DT
8
0.067
SIDE CHAIN
14
B
DT
13
0.094
SIDE CHAIN
14
B
DC
14
0.070
SIDE CHAIN
14
B
DT
18
0.060
SIDE CHAIN
14
B
DA
19
0.086
SIDE CHAIN
14
B
DG
20
0.088
SIDE CHAIN
14
B
DC
22
0.072
SIDE CHAIN
15
A
DG
1
0.056
SIDE CHAIN
15
A
DA
6
0.108
SIDE CHAIN
15
A
DT
7
0.072
SIDE CHAIN
15
A
DT
8
0.080
SIDE CHAIN
15
A
DG
9
0.049
SIDE CHAIN
15
B
DT
13
0.081
SIDE CHAIN
15
B
DC
14
0.070
SIDE CHAIN
15
B
DA
19
0.093
SIDE CHAIN
15
B
DG
20
0.096
SIDE CHAIN
15
B
DT
21
0.063
SIDE CHAIN
16
A
DA
2
0.113
SIDE CHAIN
16
A
DC
3
0.069
SIDE CHAIN
16
A
DA
6
0.110
SIDE CHAIN
16
A
DT
7
0.062
SIDE CHAIN
16
A
DT
8
0.079
SIDE CHAIN
16
A
DG
9
0.056
SIDE CHAIN
16
B
DT
13
0.073
SIDE CHAIN
16
B
DC
14
0.060
SIDE CHAIN
16
B
DA
15
0.052
SIDE CHAIN
16
B
DA
19
0.096
SIDE CHAIN
16
B
DG
20
0.085
SIDE CHAIN
17
A
DC
3
0.066
SIDE CHAIN
17
A
DA
6
0.109
SIDE CHAIN
17
A
DT
8
0.071
SIDE CHAIN
17
A
DG
9
0.053
SIDE CHAIN
17
A
DA
10
0.056
SIDE CHAIN
17
B
DT
13
0.067
SIDE CHAIN
17
B
DC
14
0.068
SIDE CHAIN
17
B
DA
15
0.057
SIDE CHAIN
17
B
DT
17
0.065
SIDE CHAIN
17
B
DA
19
0.097
SIDE CHAIN
17
B
DG
20
0.090
SIDE CHAIN
18
A
DA
2
0.100
SIDE CHAIN
18
A
DC
3
0.064
SIDE CHAIN
18
A
DA
6
0.108
SIDE CHAIN
18
A
DT
7
0.062
SIDE CHAIN
18
A
DT
8
0.075
SIDE CHAIN
18
A
DG
9
0.050
SIDE CHAIN
18
B
DT
13
0.085
SIDE CHAIN
18
B
DA
19
0.103
SIDE CHAIN
18
B
DG
20
0.098
SIDE CHAIN
18
B
DT
21
0.061
SIDE CHAIN
18
B
DC
22
0.070
SIDE CHAIN
19
A
DA
2
0.096
SIDE CHAIN
19
A
DA
6
0.106
SIDE CHAIN
19
A
DT
7
0.071
SIDE CHAIN
19
A
DT
8
0.069
SIDE CHAIN
19
B
DC
14
0.071
SIDE CHAIN
19
B
DA
15
0.051
SIDE CHAIN
19
B
DA
19
0.108
SIDE CHAIN
19
B
DG
20
0.079
SIDE CHAIN
19
B
DT
21
0.068
SIDE CHAIN
20
A
DC
3
0.071
SIDE CHAIN
20
A
DA
6
0.114
SIDE CHAIN
20
A
DT
7
0.066
SIDE CHAIN
20
A
DT
8
0.069
SIDE CHAIN
20
B
DT
13
0.071
SIDE CHAIN
20
B
DC
14
0.063
SIDE CHAIN
20
B
DA
15
0.052
SIDE CHAIN
20
B
DA
19
0.096
SIDE CHAIN
20
B
DG
20
0.091
SIDE CHAIN
20
B
DT
21
0.064
SIDE CHAIN
20
B
DC
22
0.062
SIDE CHAIN
1
2.83
0.30
108.30
111.13
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
1
8.14
1.30
127.00
135.14
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
1
-8.85
1.30
126.50
117.65
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
1
3.66
0.30
108.30
111.96
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
1
1.88
0.30
108.30
110.18
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
1
-8.33
1.30
126.50
118.17
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
1
2.38
0.30
108.30
110.68
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
1
8.04
1.30
127.00
135.04
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
1
-8.45
1.30
126.50
118.05
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
1
2.93
0.30
108.30
111.23
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
1
4.42
0.30
108.30
112.72
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
1
2.61
0.30
108.30
110.91
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
1
2.79
0.30
108.30
111.09
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
2
2.53
0.30
108.30
110.83
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
2
8.11
1.30
127.00
135.11
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
2
-8.87
1.30
126.50
117.63
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
2
1.86
0.30
108.30
110.16
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
2
3.25
0.30
108.30
111.55
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
2
2.26
0.30
108.30
110.56
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
2
-8.17
1.30
126.50
118.33
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
2
1.86
0.30
108.30
110.16
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
2
2.51
0.30
108.30
110.81
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
2
8.00
1.30
127.00
135.00
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
2
-8.33
1.30
126.50
118.17
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
2
2.95
0.30
108.30
111.25
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
2
4.16
0.30
108.30
112.46
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
2
2.74
0.30
108.30
111.04
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
2
2.89
0.30
108.30
111.19
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
2
1.99
0.30
108.30
110.29
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
3
2.44
0.30
108.30
110.74
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
3
7.84
1.30
127.00
134.84
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
3
-8.65
1.30
126.50
117.85
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
3
2.67
0.30
108.30
110.97
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
3
3.25
0.30
108.30
111.55
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
3
-8.54
1.30
126.50
117.96
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
3
2.07
0.30
108.30
110.37
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
3
2.97
0.30
108.30
111.27
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
3
8.24
1.30
127.00
135.24
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
3
-8.59
1.30
126.50
117.91
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
3
2.80
0.30
108.30
111.10
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
3
4.49
0.30
108.30
112.79
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
3
2.66
0.30
108.30
110.96
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
3
2.71
0.30
108.30
111.01
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
3
1.85
0.30
108.30
110.15
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
4
2.37
0.30
108.30
110.67
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
4
-8.76
1.30
126.50
117.74
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
4
2.19
0.30
108.30
110.49
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
4
3.41
0.30
108.30
111.71
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
4
2.36
0.30
108.30
110.66
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
4
-8.34
1.30
126.50
118.16
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
4
1.87
0.30
108.30
110.17
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
4
2.46
0.30
108.30
110.76
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
4
8.02
1.30
127.00
135.02
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
4
-8.36
1.30
126.50
118.14
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
4
3.10
0.30
108.30
111.40
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
4
4.26
0.30
108.30
112.56
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
4
2.61
0.30
108.30
110.91
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
4
2.57
0.30
108.30
110.87
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
5
2.57
0.30
108.30
110.87
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
5
8.01
1.30
127.00
135.01
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
5
-8.82
1.30
126.50
117.68
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
5
3.61
0.60
118.90
122.51
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
5
2.12
0.30
108.30
110.42
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
5
3.56
0.30
108.30
111.86
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
5
2.19
0.30
108.30
110.49
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
5
2.19
0.30
108.30
110.49
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
5
-8.11
1.30
126.50
118.39
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
5
2.07
0.30
108.30
110.37
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
5
2.96
0.30
108.30
111.26
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
5
8.18
1.30
127.00
135.18
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
5
-8.61
1.30
126.50
117.89
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
5
3.47
0.30
108.30
111.77
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
5
4.53
0.30
108.30
112.83
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
5
2.56
0.30
108.30
110.86
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
5
3.26
0.30
108.30
111.56
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
6
2.55
0.30
108.30
110.85
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
6
8.07
1.30
127.00
135.07
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
6
-8.74
1.30
126.50
117.76
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
6
1.83
0.30
108.30
110.13
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
6
3.63
0.60
118.90
122.53
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
6
3.69
0.30
108.30
111.99
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
6
2.33
0.30
108.30
110.63
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
6
-8.01
1.30
126.50
118.49
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
6
2.09
0.30
108.30
110.39
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
6
2.81
0.30
108.30
111.11
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
6
8.08
1.30
127.00
135.08
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
6
-8.45
1.30
126.50
118.05
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
6
3.61
0.30
108.30
111.91
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
6
4.57
0.30
108.30
112.87
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
6
2.64
0.30
108.30
110.94
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
6
2.97
0.30
108.30
111.27
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
7
2.33
0.30
108.30
110.63
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
7
7.84
1.30
127.00
134.84
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
7
-8.80
1.30
126.50
117.70
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
7
1.98
0.30
108.30
110.28
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
7
2.93
0.30
108.30
111.23
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
7
1.84
0.30
108.30
110.14
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
7
-8.42
1.30
126.50
118.08
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
7
2.77
0.30
108.30
111.07
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
7
8.16
1.30
127.00
135.16
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
7
-8.53
1.30
126.50
117.97
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
7
3.41
0.30
108.30
111.71
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
7
4.30
0.30
108.30
112.60
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
7
2.41
0.30
108.30
110.71
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
7
2.52
0.30
108.30
110.82
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
8
2.80
0.30
108.30
111.10
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
8
8.24
1.30
127.00
135.24
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
8
-8.81
1.30
126.50
117.69
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
8
3.38
0.30
108.30
111.68
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
8
2.40
0.30
108.30
110.70
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
8
-8.24
1.30
126.50
118.26
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
8
2.74
0.30
108.30
111.04
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
8
8.00
1.30
127.00
135.00
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
8
-8.40
1.30
126.50
118.10
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
8
3.48
0.30
108.30
111.78
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
8
4.33
0.30
108.30
112.63
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
8
2.77
0.30
108.30
111.07
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
8
3.05
0.30
108.30
111.35
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
8
2.38
0.30
108.30
110.68
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
9
2.32
0.30
108.30
110.62
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
9
7.83
1.30
127.00
134.83
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
9
-8.73
1.30
126.50
117.77
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
9
3.62
0.60
118.90
122.52
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
9
2.59
0.30
108.30
110.89
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
9
3.67
0.30
108.30
111.97
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
9
2.23
0.30
108.30
110.53
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
9
-7.96
1.30
126.50
118.54
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
9
2.12
0.30
108.30
110.42
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
9
2.89
0.30
108.30
111.19
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
9
8.20
1.30
127.00
135.20
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
9
-8.58
1.30
126.50
117.92
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
9
3.77
0.30
108.30
112.07
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
9
4.75
0.30
108.30
113.05
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
9
2.49
0.30
108.30
110.79
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
9
2.77
0.30
108.30
111.07
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
10
2.21
0.30
108.30
110.51
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
10
7.88
1.30
127.00
134.88
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
10
-8.80
1.30
126.50
117.70
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
10
3.60
0.60
118.90
122.50
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
10
2.04
0.30
108.30
110.34
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
10
3.15
0.30
108.30
111.45
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
10
2.17
0.30
108.30
110.47
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
10
-8.08
1.30
126.50
118.42
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
10
1.86
0.30
108.30
110.16
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
10
2.77
0.30
108.30
111.07
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
10
8.09
1.30
127.00
135.09
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
10
-8.47
1.30
126.50
118.03
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
10
3.14
0.30
108.30
111.44
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
10
4.17
0.30
108.30
112.47
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
10
2.32
0.30
108.30
110.62
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
10
2.32
0.30
108.30
110.62
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
11
2.24
0.30
108.30
110.54
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
11
7.90
1.30
127.00
134.90
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
11
-8.78
1.30
126.50
117.72
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
11
2.17
0.30
108.30
110.47
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
11
3.20
0.30
108.30
111.50
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
11
2.40
0.30
108.30
110.70
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
11
-8.14
1.30
126.50
118.36
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
11
2.98
0.30
108.30
111.28
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
11
8.24
1.30
127.00
135.24
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
11
-8.53
1.30
126.50
117.97
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
11
2.92
0.30
108.30
111.22
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
11
4.16
0.30
108.30
112.46
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
11
2.77
0.30
108.30
111.07
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
11
2.63
0.30
108.30
110.93
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
11
1.95
0.30
108.30
110.25
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
12
1.97
0.30
108.30
110.27
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
12
-8.95
1.30
126.50
117.55
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
12
3.44
0.30
108.30
111.74
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
12
1.81
0.30
108.30
110.11
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
12
3.72
0.60
118.90
122.62
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
12
2.04
0.30
108.30
110.34
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
12
3.52
0.30
108.30
111.82
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
12
1.82
0.30
108.30
110.12
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
12
-8.31
1.30
126.50
118.19
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
12
2.57
0.30
108.30
110.87
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
12
8.11
1.30
127.00
135.11
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
12
-8.47
1.30
126.50
118.03
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
12
3.48
0.30
108.30
111.78
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
12
4.25
0.30
108.30
112.55
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
12
2.07
0.30
108.30
110.37
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
12
2.18
0.30
108.30
110.48
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
12
1.88
0.30
108.30
110.18
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
13
-8.82
1.30
126.50
117.68
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
13
3.69
0.30
108.30
111.99
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
13
3.67
0.60
118.90
122.57
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
13
2.04
0.30
108.30
110.34
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
13
3.74
0.30
108.30
112.04
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
13
2.94
0.30
108.30
111.24
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
13
-8.12
1.30
126.50
118.38
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
13
1.98
0.30
108.30
110.28
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
13
2.94
0.30
108.30
111.24
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
13
8.13
1.30
127.00
135.13
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
13
-8.52
1.30
126.50
117.98
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
13
3.57
0.30
108.30
111.87
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
13
4.35
0.30
108.30
112.65
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
13
2.51
0.30
108.30
110.81
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
13
2.65
0.30
108.30
110.95
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
13
2.30
0.30
108.30
110.60
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
14
2.93
0.30
108.30
111.23
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
14
8.29
1.30
127.00
135.29
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
14
-8.78
1.30
126.50
117.72
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
14
3.64
0.60
118.90
122.54
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
14
2.03
0.30
108.30
110.33
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
14
3.19
0.30
108.30
111.49
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
14
2.22
0.30
108.30
110.52
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
14
-8.15
1.30
126.50
118.35
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
14
1.81
0.30
108.30
110.11
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
14
3.01
0.30
108.30
111.31
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
14
8.20
1.30
127.00
135.20
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
14
-8.53
1.30
126.50
117.97
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
14
3.20
0.30
108.30
111.50
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
14
3.94
0.30
108.30
112.24
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
14
2.38
0.30
108.30
110.68
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
14
2.71
0.30
108.30
111.01
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
15
2.29
0.30
108.30
110.59
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
15
7.83
1.30
127.00
134.83
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
15
-9.03
1.30
126.50
117.47
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
15
3.56
0.30
108.30
111.86
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
15
3.69
0.60
118.90
122.59
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
15
2.21
0.30
108.30
110.51
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
15
3.62
0.30
108.30
111.92
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
15
2.47
0.30
108.30
110.77
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
15
-7.92
1.30
126.50
118.58
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
15
2.07
0.30
108.30
110.37
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
15
2.59
0.30
108.30
110.89
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
15
8.08
1.30
127.00
135.08
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
15
-8.39
1.30
126.50
118.11
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
15
3.60
0.30
108.30
111.90
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
15
4.75
0.30
108.30
113.05
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
15
2.29
0.30
108.30
110.59
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
15
2.40
0.30
108.30
110.70
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
15
2.10
0.30
108.30
110.40
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
16
2.44
0.30
108.30
110.74
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
16
8.07
1.30
127.00
135.07
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
16
-8.67
1.30
126.50
117.83
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
16
2.12
0.30
108.30
110.42
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
16
3.09
0.30
108.30
111.39
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
16
2.59
0.30
108.30
110.89
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
16
-8.02
1.30
126.50
118.48
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
16
2.84
0.30
108.30
111.14
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
16
8.15
1.30
127.00
135.15
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
16
-8.52
1.30
126.50
117.98
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
16
3.09
0.30
108.30
111.39
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
16
4.37
0.30
108.30
112.67
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
16
2.33
0.30
108.30
110.63
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
16
2.71
0.30
108.30
111.01
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
16
2.09
0.30
108.30
110.39
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
17
2.19
0.30
108.30
110.49
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
17
7.88
1.30
127.00
134.88
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
17
-8.92
1.30
126.50
117.58
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
17
3.72
0.30
108.30
112.02
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
17
1.81
0.30
108.30
110.11
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
17
3.68
0.60
118.90
122.58
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
17
2.21
0.30
108.30
110.51
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
17
3.65
0.30
108.30
111.95
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
17
2.84
0.30
108.30
111.14
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
17
-7.98
1.30
126.50
118.52
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
17
1.81
0.30
108.30
110.11
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
17
3.15
0.30
108.30
111.45
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
17
8.26
1.30
127.00
135.26
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
17
-8.60
1.30
126.50
117.90
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
17
3.08
0.30
108.30
111.38
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
17
4.01
0.30
108.30
112.31
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
17
2.32
0.30
108.30
110.62
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
17
2.61
0.30
108.30
110.91
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
17
2.35
0.30
108.30
110.65
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
18
2.42
0.30
108.30
110.72
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
18
8.18
1.30
127.00
135.18
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
18
-8.73
1.30
126.50
117.77
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
18
3.62
0.60
118.90
122.52
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
18
1.97
0.30
108.30
110.27
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
18
3.28
0.30
108.30
111.58
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
18
1.97
0.30
108.30
110.27
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
18
-8.29
1.30
126.50
118.21
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
18
2.60
0.30
108.30
110.90
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
18
8.09
1.30
127.00
135.09
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
18
-8.46
1.30
126.50
118.04
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
18
3.33
0.30
108.30
111.63
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
18
4.46
0.30
108.30
112.76
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
18
2.51
0.30
108.30
110.81
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
18
2.54
0.30
108.30
110.84
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
19
2.66
0.30
108.30
110.96
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
19
8.08
1.30
127.00
135.08
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
19
-8.89
1.30
126.50
117.61
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
19
3.61
0.30
108.30
111.91
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
19
2.81
0.30
108.30
111.11
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
19
-7.87
1.30
126.50
118.63
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
19
2.31
0.30
108.30
110.61
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
19
2.91
0.30
108.30
111.21
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
19
7.86
1.30
127.00
134.86
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
19
-8.30
1.30
126.50
118.20
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
19
3.16
0.30
108.30
111.46
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
19
4.32
0.30
108.30
112.62
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
19
2.42
0.30
108.30
110.72
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
19
2.98
0.30
108.30
111.28
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
19
1.87
0.30
108.30
110.17
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
20
7.84
1.30
127.00
134.84
A
A
A
C8
N9
C1'
DG
DG
DG
1
1
1
N
20
-8.75
1.30
126.50
117.75
A
A
A
C4
N9
C1'
DG
DG
DG
1
1
1
N
20
3.87
0.30
108.30
112.17
A
A
A
O4'
C1'
N9
DA
DA
DA
2
2
2
N
20
2.01
0.30
108.30
110.31
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
20
3.79
0.60
118.90
122.69
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
20
2.30
0.30
108.30
110.60
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
20
3.71
0.30
108.30
112.01
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
20
2.73
0.30
108.30
111.03
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
20
-8.07
1.30
126.50
118.43
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
20
2.92
0.30
108.30
111.22
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
20
8.26
1.30
127.00
135.26
B
B
B
C8
N9
C1'
DG
DG
DG
12
12
12
N
20
-8.67
1.30
126.50
117.83
B
B
B
C4
N9
C1'
DG
DG
DG
12
12
12
N
20
3.51
0.30
108.30
111.81
B
B
B
O4'
C1'
N1
DC
DC
DC
14
14
14
N
20
4.54
0.30
108.30
112.84
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
20
2.40
0.30
108.30
110.70
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
20
2.53
0.30
108.30
110.83
B
B
B
O4'
C1'
N1
DT
DT
DT
21
21
21
N
20
1.84
0.30
108.30
110.14
B
B
B
O4'
C1'
N1
DC
DC
DC
22
22
22
N
3
B
B
N3
C4
DA
DA
19
19
0.036
0.006
1.344
1.380
N
7
B
B
N3
C4
DA
DA
19
19
0.037
0.006
1.344
1.381
N
8
B
B
N3
C4
DA
DA
19
19
0.037
0.006
1.344
1.381
N
9
B
B
N3
C4
DA
DA
19
19
0.036
0.006
1.344
1.380
N
12
B
B
N3
C4
DA
DA
19
19
0.036
0.006
1.344
1.380
N
13
B
B
N3
C4
DA
DA
19
19
0.036
0.006
1.344
1.380
N
14
B
B
N3
C4
DA
DA
19
19
0.036
0.006
1.344
1.380
N
Solution structure of a duocarmycin sa-indole-alkylated dna dupleX
1
N
N
2
N
N
3
N
N
covale
1.492
none
B
DA
19
B
N3
DA
8
1_555
B
DSI
23
C
C13
DSI
1_555
hydrog
WATSON-CRICK
A
DG
1
A
N1
DG
1
1_555
B
DC
22
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
1
A
N2
DG
1
1_555
B
DC
22
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
1
A
O6
DG
1
1_555
B
DC
22
B
N4
DC
11
1_555
hydrog
WATSON-CRICK
A
DA
2
A
N1
DA
2
1_555
B
DT
21
B
N3
DT
10
1_555
hydrog
WATSON-CRICK
A
DA
2
A
N6
DA
2
1_555
B
DT
21
B
O4
DT
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
20
B
N1
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
20
B
O6
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
20
B
N2
DG
9
1_555
hydrog
WATSON-CRICK
A
DT
4
A
N3
DT
4
1_555
B
DA
19
B
N1
DA
8
1_555
hydrog
WATSON-CRICK
A
DT
4
A
O4
DT
4
1_555
B
DA
19
B
N6
DA
8
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N1
DA
5
1_555
B
DT
18
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N6
DA
5
1_555
B
DT
18
B
O4
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N1
DA
6
1_555
B
DT
17
B
N3
DT
6
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N6
DA
6
1_555
B
DT
17
B
O4
DT
6
1_555
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
7
1_555
B
DA
16
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
7
1_555
B
DA
16
B
N6
DA
5
1_555
hydrog
DT-DC MISPAIR
A
DT
8
A
O4
DT
8
1_555
B
DC
14
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
15
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
15
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DG
9
A
N1
DG
9
1_555
B
DC
14
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
9
A
N2
DG
9
1_555
B
DC
14
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
9
A
O6
DG
9
1_555
B
DC
14
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DA
10
A
N1
DA
10
1_555
B
DT
13
B
N3
DT
2
1_555
hydrog
WATSON-CRICK
A
DA
10
A
N6
DA
10
1_555
B
DT
13
B
O4
DT
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
12
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
12
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
12
B
N2
DG
1
1_555
DNA
DEOXYRIBONUCLEIC ACID, DUOCARMYCIN, DNA, MINOR GROOVE BINDING, ANTITUMOR AGENT, LIGAND-DNA COMPLEX
1DSI
PDB
1
1DSI
1DSI
PDB
2
1DSI
1
11
1DSI
1
11
1DSI
A
1
1
11
12
22
1DSI
12
22
1DSI
B
2
1
11
BINDING SITE FOR RESIDUE DSI B 23
B
DSI
23
Software
7
A
DA
5
A
DA
5
7
1_555
A
DA
6
A
DA
6
7
1_555
A
DT
7
A
DT
7
7
1_555
B
DT
18
B
DT
7
7
1_555
B
DA
19
B
DA
8
7
1_555
B
DG
20
B
DG
9
7
1_555
B
DT
21
B
DT
10
7
1_555
1
P 1