0.007880 0.000000 0.004531 0.000000 0.021954 0.000000 0.000000 0.000000 0.016106 0.00000 0.00000 0.00000 Grant, R.A. Rould, M.A. Klemm, J.D. Pabo, C.O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 119.90 90.00 126.900 45.550 71.620 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N O N 59 N P N 60 N O N 61 N O N 62 N O N 63 N C N 64 R C N 65 N O N 66 S C N 67 N O N 68 N C N 69 R C Y 70 N N Y 71 N C Y 72 N N Y 73 N C Y 74 N C N 75 N N Y 76 N N Y 77 N C Y 78 N N Y 79 N C N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N O N 95 N P N 96 N O N 97 N O N 98 N O N 99 N C N 100 R C N 101 N O N 102 S C N 103 N O N 104 N C N 105 R C N 106 N N N 107 N C N 108 N O N 109 N N N 110 N C N 111 N N N 112 N C N 113 N C N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N O N 129 N P N 130 N O N 131 N O N 132 N O N 133 N C N 134 R C N 135 N O N 136 S C N 137 N O N 138 N C N 139 R C Y 140 N N Y 141 N C Y 142 N N Y 143 N C N 144 N C N 145 N O N 146 N N N 147 N C N 148 N N N 149 N N Y 150 N C N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N O N 166 N P N 167 N O N 168 N O N 169 N O N 170 N C N 171 R C N 172 N O N 173 S C N 174 N O N 175 N C N 176 R C N 177 N N N 178 N C N 179 N O N 180 N N N 181 N C N 182 N O N 183 N C N 184 N C N 185 N C N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N N N 202 S C N 203 N C N 204 N O N 205 N C N 206 N C N 207 N C N 208 N O N 209 N N N 210 N O N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N N N 222 S C N 223 N C N 224 N O N 225 N C N 226 N C N 227 N C N 228 N O N 229 N O N 230 N O N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N N N 241 N C N 242 N C N 243 N O N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N O N 251 N H N 252 N H N 253 N N N 254 S C N 255 N C N 256 N O N 257 S C N 258 N C N 259 N C N 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N N N 276 S C N 277 N C N 278 N O N 279 N C N 280 N C N 281 N C N 282 N C N 283 N O N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N N N 298 S C N 299 N C N 300 N O N 301 N C N 302 N C N 303 N C N 304 N C N 305 N N N 306 N O N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C Y 332 N C N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N N N 363 S C N 364 N C N 365 N O N 366 N C N 367 N O N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N N N 377 S C N 378 N C N 379 N O N 380 R C N 381 N O N 382 N C N 383 N O N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N N N 394 S C N 395 N C N 396 N O N 397 N C Y 398 N C Y 399 N C Y 400 N C Y 401 N N Y 402 N C Y 403 N C Y 404 N C Y 405 N C Y 406 N C N 407 N O N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N N N 421 S C N 422 N C N 423 N O N 424 N C Y 425 N C Y 426 N C Y 427 N C Y 428 N C Y 429 N C Y 430 N C N 431 N O N 432 N O N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N doub N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing Y 78 N sing Y 79 N sing Y 80 N doub N 81 N sing Y 82 N sing Y 83 N sing Y 84 N doub N 85 N sing Y 86 N doub N 87 N sing N 88 N sing Y 89 N sing Y 90 N doub N 91 N sing Y 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N doub N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing Y 151 N sing Y 152 N sing Y 153 N doub N 154 N sing Y 155 N sing N 156 N sing Y 157 N doub N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N doub N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N doub N 325 N sing N 326 N sing N 327 N sing N 328 N sing Y 329 N doub Y 330 N sing Y 331 N sing N 332 N sing Y 333 N doub N 334 N sing Y 335 N doub N 336 N sing Y 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N doub N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing Y 398 N doub Y 399 N sing Y 400 N sing N 401 N sing Y 402 N doub Y 403 N sing Y 404 N sing N 405 N sing Y 406 N sing Y 407 N doub N 408 N sing Y 409 N doub N 410 N sing Y 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N doub N 422 N sing N 423 N sing N 424 N sing N 425 N sing Y 426 N doub Y 427 N sing Y 428 N sing N 429 N sing Y 430 N doub N 431 N sing Y 432 N doub N 433 N sing Y 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing US Biochemistry BICHAW 0033 0006-2960 39 8187 8192 10.1021/bi000071a 10889025 Exploring the role of glutamine 50 in the homeodomain-DNA interface: crystal structure of engrailed (Gln50 --> ala) complex at 2.0 A. 2000 UK J.Mol.Biol. JMOBAK 0070 0022-2836 284 351 361 10.1006/jmbi.1998.2147 Engrailed homeodomain-DNA complex at 2.2 Angstroms resolution: A detailed view of the interface and comparison with other engrailed structures 1998 UK Structure STRUE6 2005 0969-2126 5 1047 1054 10.1016/S0969-2126(97)00256-6 Engrailed (gln50->lys) homeodomain-DNA complex at 1.9 Angstroms resolution: structural basis for enhanced affinity and altered specificity 1997 US Biochemistry BICHAW 0033 0006-2960 33 9187 9194 Differential DNA-binding specificity of the engrailed homeodomain: the role of residue 50 1994 US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 63 579 590 10.1016/0092-8674(90)90453-L Crystal structure of an engrailed homeodomain-DNA comples at 2.8 Angstroms resolution: a framework for understanding homeodomain-DNA interactions 1990 10.2210/pdb1du0/pdb pdb_00001du0 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 128 1 IMAGE PLATE 1996-01-24 RIGAKU RAXIS IIC SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 6387.157 DNA (5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*TP*AP*CP*CP*TP*AP*A)-3') 1 syn polymer 6494.248 DNA (5'-D(*AP*TP*TP*AP*GP*GP*TP*AP*AP*TP*TP*AP*CP*AP*TP*GP*GP*CP*AP*AP*A)-3') 1 syn polymer 6907.921 ENGRAILED HOMEODOMAIN GLN50ALA 2 man polymer 18.015 water 103 nat water HOMEOTIC PROTEIN ENGRAILED, SEGMENTATION POLARITY HOMEOBOX PROTEIN ENGRAILED no no (DT)(DT)(DT)(DT)(DG)(DC)(DC)(DA)(DT)(DG)(DT)(DA)(DA)(DT)(DT)(DA)(DC)(DC)(DT)(DA) (DA) TTTTGCCATGTAATTACCTAA C polydeoxyribonucleotide no no (DA)(DT)(DT)(DA)(DG)(DG)(DT)(DA)(DA)(DT)(DT)(DA)(DC)(DA)(DT)(DG)(DG)(DC)(DA)(DA) (DA) ATTAGGTAATTACATGGCAAA D polydeoxyribonucleotide no no RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFANKRAKIKKS RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFANKRAKIKKS A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n fruit fly Drosophila Escherichia sample 7227 Drosophila melanogaster 562 Escherichia coli 1 3.31 62.80 VAPOR DIFFUSION, HANGING DROP 7.0 bis-Tris-propane, PEG 400, ammonium acetate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K 295 ammonium acetate 1 bis-Tris-propane 1 PEG 400 1 PEG 400 2 -4.251 1 20 C 202 D 321 -0.097 C_DT202:DA321_D 1 -9.917 -0.125 0.138 -0.316 -5.355 1 20 C 203 D 320 8.248 C_DT203:DA320_D 2 -2.372 0.306 0.281 -0.264 1.426 1 20 C 204 D 319 0.553 C_DT204:DA319_D 3 -12.409 0.293 -0.061 -0.277 -8.877 1 19 C 205 D 318 -2.372 C_DG205:DC318_D 4 -1.959 -0.466 -0.359 -0.305 3.114 1 19 C 206 D 317 5.229 C_DC206:DG317_D 5 -4.711 0.106 -0.083 -0.219 5.417 1 19 C 207 D 316 0.761 C_DC207:DG316_D 6 -10.558 0.021 -0.130 -0.350 -3.221 1 20 C 208 D 315 2.010 C_DA208:DT315_D 7 -10.094 -0.688 -0.047 -0.411 -0.889 1 20 C 209 D 314 3.392 C_DT209:DA314_D 8 -15.515 0.000 -0.125 -0.038 -4.718 1 19 C 210 D 313 3.298 C_DG210:DC313_D 9 -3.308 -0.476 -0.066 -0.030 6.306 1 20 C 211 D 312 8.225 C_DT211:DA312_D 10 -4.211 -0.126 -0.039 -0.129 4.232 1 20 C 212 D 311 4.996 C_DA212:DT311_D 11 -21.626 0.059 -0.023 -0.209 -3.656 1 20 C 213 D 310 2.076 C_DA213:DT310_D 12 -15.422 0.252 0.076 -0.110 -2.464 1 20 C 214 D 309 3.410 C_DT214:DA309_D 13 -12.796 0.035 0.070 -0.037 -3.056 1 20 C 215 D 308 4.323 C_DT215:DA308_D 14 -13.719 0.181 -0.003 -0.187 -1.973 1 20 C 216 D 307 -0.233 C_DA216:DT307_D 15 -4.258 0.121 0.404 -0.059 13.217 1 19 C 217 D 306 0.951 C_DC217:DG306_D 16 -3.937 0.080 0.048 -0.002 -2.102 1 19 C 218 D 305 1.542 C_DC218:DG305_D 17 -6.106 0.444 -0.002 -0.093 2.879 1 20 C 219 D 304 0.352 C_DT219:DA304_D 18 -6.217 0.020 -0.087 -0.107 -0.671 1 20 C 220 D 303 0.784 C_DA220:DT303_D 19 -9.317 -0.191 -0.198 -0.158 2.611 1 20 C 221 D 302 2.654 C_DA221:DT302_D 20 -14.575 0.016 -0.170 -0.243 3.494 39.320 C C 202 203 8.315 D D 321 320 3.338 5.574 1.678 0.637 CC_DT202DT203:DA320DA321_DD 1 2.611 -3.895 38.854 0.251 -2.168 3.052 33.500 C C 203 204 4.743 D D 320 319 3.077 2.731 -0.857 0.031 CC_DT203DT204:DA319DA320_DD 2 0.686 -1.191 33.385 -0.368 1.593 3.458 29.799 C C 204 205 12.764 D D 319 318 3.519 6.496 0.523 -0.077 CC_DT204DG205:DC318DA319_DD 3 3.806 -7.478 28.853 -1.619 -0.155 3.065 33.457 C C 205 206 3.605 D D 318 317 3.051 2.073 -0.170 0.240 CC_DG205DC206:DG317DC318_DD 4 -1.909 3.320 33.342 0.096 0.000 3.309 33.999 C C 206 207 -1.376 D D 317 316 3.322 -0.805 -0.521 0.220 CC_DC206DC207:DG316DG317_DD 5 0.470 -0.804 33.986 0.507 0.967 3.485 41.552 C C 207 208 -2.905 D D 316 315 3.524 -2.060 0.198 0.718 CC_DC207DA208:DT315DG316_DD 6 -0.152 0.215 41.503 1.247 -0.296 3.193 35.390 C C 208 209 0.896 D D 315 314 3.187 0.544 -0.376 -0.102 CC_DA208DT209:DA314DT315_DD 7 -0.863 1.419 35.376 -0.246 0.495 3.400 39.629 C C 209 210 -2.046 D D 314 313 3.430 -1.386 0.339 0.110 CC_DT209DG210:DC313DA314_DD 8 -2.285 3.373 39.542 0.332 -0.780 3.029 25.187 C C 210 211 7.741 D D 313 312 3.087 3.366 -0.154 -0.233 CC_DG210DT211:DA312DC313_DD 9 0.069 -0.159 24.964 -1.460 0.373 3.348 42.141 C C 211 212 1.896 D D 312 311 3.315 1.363 -0.782 1.166 CC_DT211DA212:DT311DA312_DD 10 0.073 -0.101 42.120 1.479 1.095 3.342 36.842 C C 212 213 1.865 D D 311 310 3.370 1.178 0.307 -0.311 CC_DA212DA213:DT310DT311_DD 11 -1.711 2.709 36.785 -0.656 -0.725 3.252 32.822 C C 213 214 -4.453 D D 310 309 3.207 -2.513 -0.241 -0.865 CC_DA213DT214:DA309DT310_DD 12 1.170 -2.072 32.708 -1.104 0.626 3.156 34.925 C C 214 215 3.017 D D 309 308 3.165 1.809 0.200 -0.226 CC_DT214DT215:DA308DA309_DD 13 1.799 -3.000 34.834 -0.641 -0.070 2.879 30.513 C C 215 216 14.268 D D 308 307 3.162 7.424 0.153 -0.678 CC_DT215DA216:DT307DA308_DD 14 -3.124 6.004 29.455 -2.678 -0.876 2.814 27.069 C C 216 217 10.808 D D 307 306 2.973 5.028 0.767 -0.806 CC_DA216DC217:DG306DT307_DD 15 1.521 -3.270 26.563 -2.859 -1.295 3.586 40.936 C C 217 218 2.056 D D 306 305 3.585 1.437 -0.650 -0.879 CC_DC217DC218:DG305DG306_DD 16 -2.622 3.752 40.832 -1.430 0.614 2.971 33.258 C C 218 219 14.906 D D 305 304 3.123 8.426 -0.028 -0.132 CC_DC218DT219:DA304DG305_DD 17 3.718 -6.577 31.992 -1.570 0.639 3.095 28.643 C C 219 220 16.949 D D 304 303 3.406 8.270 -0.046 -0.597 CC_DT219DA220:DT303DA304_DD 18 0.797 -1.633 27.436 -3.106 0.275 3.191 35.417 C C 220 221 7.744 D D 303 302 3.230 4.698 0.144 -0.086 CC_DA220DA221:DT302DT303_DD 19 -0.268 0.442 35.113 -0.822 -0.276 database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Data collection 1 0 2000-07-31 1 1 2008-04-27 1 2 2011-07-13 1 3 2021-11-03 1 4 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details WILD TYPE ENGRAILED-DNA CO-CRYSTAL 2.8 ANGSTROMS Q50K VARIANT ENGRAILED-DNA CO-CRYSTAL WILD TYPE ENGRAILED-DNA CO-CRYSTAL 2.2 ANGSTROMS RCSB Y RCSB 2000-01-13 REL HOH water HOH 408 4 HOH HOH 408 C HOH 409 4 HOH HOH 409 C HOH 411 4 HOH HOH 411 C HOH 417 4 HOH HOH 417 C HOH 419 4 HOH HOH 419 C HOH 426 4 HOH HOH 426 C HOH 429 4 HOH HOH 429 C HOH 430 4 HOH HOH 430 C HOH 431 4 HOH HOH 431 C HOH 432 4 HOH HOH 432 C HOH 434 4 HOH HOH 434 C HOH 435 4 HOH HOH 435 C HOH 441 4 HOH HOH 441 C HOH 445 4 HOH HOH 445 C HOH 450 4 HOH HOH 450 C HOH 451 4 HOH HOH 451 C HOH 453 4 HOH HOH 453 C HOH 454 4 HOH HOH 454 C HOH 457 4 HOH HOH 457 C HOH 461 4 HOH HOH 461 C HOH 463 4 HOH HOH 463 C HOH 481 4 HOH HOH 481 C HOH 483 4 HOH HOH 483 C HOH 485 4 HOH HOH 485 C HOH 490 4 HOH HOH 490 C HOH 491 4 HOH HOH 491 C HOH 496 4 HOH HOH 496 C HOH 501 4 HOH HOH 501 C HOH 503 4 HOH HOH 503 C HOH 405 4 HOH HOH 405 D HOH 406 4 HOH HOH 406 D HOH 418 4 HOH HOH 418 D HOH 420 4 HOH HOH 420 D HOH 421 4 HOH HOH 421 D HOH 423 4 HOH HOH 423 D HOH 428 4 HOH HOH 428 D HOH 433 4 HOH HOH 433 D HOH 438 4 HOH HOH 438 D HOH 439 4 HOH HOH 439 D HOH 440 4 HOH HOH 440 D HOH 449 4 HOH HOH 449 D HOH 455 4 HOH HOH 455 D HOH 456 4 HOH HOH 456 D HOH 459 4 HOH HOH 459 D HOH 460 4 HOH HOH 460 D HOH 476 4 HOH HOH 476 D HOH 478 4 HOH HOH 478 D HOH 482 4 HOH HOH 482 D HOH 487 4 HOH HOH 487 D HOH 498 4 HOH HOH 498 D HOH 499 4 HOH HOH 499 D HOH 500 4 HOH HOH 500 D HOH 401 4 HOH HOH 401 A HOH 402 4 HOH HOH 402 A HOH 403 4 HOH HOH 403 A HOH 404 4 HOH HOH 404 A HOH 413 4 HOH HOH 413 A HOH 414 4 HOH HOH 414 A HOH 422 4 HOH HOH 422 A HOH 442 4 HOH HOH 442 A HOH 452 4 HOH HOH 452 A HOH 464 4 HOH HOH 464 A HOH 465 4 HOH HOH 465 A HOH 466 4 HOH HOH 466 A HOH 471 4 HOH HOH 471 A HOH 475 4 HOH HOH 475 A HOH 480 4 HOH HOH 480 A HOH 486 4 HOH HOH 486 A HOH 488 4 HOH HOH 488 A HOH 492 4 HOH HOH 492 A HOH 494 4 HOH HOH 494 A HOH 495 4 HOH HOH 495 A HOH 497 4 HOH HOH 497 A HOH 407 4 HOH HOH 407 B HOH 410 4 HOH HOH 410 B HOH 412 4 HOH HOH 412 B HOH 415 4 HOH HOH 415 B HOH 416 4 HOH HOH 416 B HOH 424 4 HOH HOH 424 B HOH 425 4 HOH HOH 425 B HOH 427 4 HOH HOH 427 B HOH 436 4 HOH HOH 436 B HOH 437 4 HOH HOH 437 B HOH 443 4 HOH HOH 443 B HOH 444 4 HOH HOH 444 B HOH 446 4 HOH HOH 446 B HOH 447 4 HOH HOH 447 B HOH 448 4 HOH HOH 448 B HOH 458 4 HOH HOH 458 B HOH 467 4 HOH HOH 467 B HOH 468 4 HOH HOH 468 B HOH 469 4 HOH HOH 469 B HOH 470 4 HOH HOH 470 B HOH 472 4 HOH HOH 472 B HOH 473 4 HOH HOH 473 B HOH 474 4 HOH HOH 474 B HOH 477 4 HOH HOH 477 B HOH 479 4 HOH HOH 479 B HOH 484 4 HOH HOH 484 B HOH 489 4 HOH HOH 489 B HOH 493 4 HOH HOH 493 B HOH 502 4 HOH HOH 502 B HOH 504 4 HOH HOH 504 B T 201 n 1 DT 201 C T 202 n 2 DT 202 C T 203 n 3 DT 203 C T 204 n 4 DT 204 C G 205 n 5 DG 205 C C 206 n 6 DC 206 C C 207 n 7 DC 207 C A 208 n 8 DA 208 C T 209 n 9 DT 209 C G 210 n 10 DG 210 C T 211 n 11 DT 211 C A 212 n 12 DA 212 C A 213 n 13 DA 213 C T 214 n 14 DT 214 C T 215 n 15 DT 215 C A 216 n 16 DA 216 C C 217 n 17 DC 217 C C 218 n 18 DC 218 C T 219 n 19 DT 219 C A 220 n 20 DA 220 C A 221 n 21 DA 221 C A 301 n 1 DA 301 D T 302 n 2 DT 302 D T 303 n 3 DT 303 D A 304 n 4 DA 304 D G 305 n 5 DG 305 D G 306 n 6 DG 306 D T 307 n 7 DT 307 D A 308 n 8 DA 308 D A 309 n 9 DA 309 D T 310 n 10 DT 310 D T 311 n 11 DT 311 D A 312 n 12 DA 312 D C 313 n 13 DC 313 D A 314 n 14 DA 314 D T 315 n 15 DT 315 D G 316 n 16 DG 316 D G 317 n 17 DG 317 D C 318 n 18 DC 318 D A 319 n 19 DA 319 D A 320 n 20 DA 320 D A 321 n 21 DA 321 D n 1 3 A n 2 4 A n 3 5 A n 4 6 A ALA 7 n 5 ALA 7 A PHE 8 n 6 PHE 8 A SER 9 n 7 SER 9 A SER 10 n 8 SER 10 A GLU 11 n 9 GLU 11 A GLN 12 n 10 GLN 12 A LEU 13 n 11 LEU 13 A ALA 14 n 12 ALA 14 A ARG 15 n 13 ARG 15 A LEU 16 n 14 LEU 16 A LYS 17 n 15 LYS 17 A ARG 18 n 16 ARG 18 A GLU 19 n 17 GLU 19 A PHE 20 n 18 PHE 20 A ASN 21 n 19 ASN 21 A GLU 22 n 20 GLU 22 A ASN 23 n 21 ASN 23 A ARG 24 n 22 ARG 24 A TYR 25 n 23 TYR 25 A LEU 26 n 24 LEU 26 A THR 27 n 25 THR 27 A GLU 28 n 26 GLU 28 A ARG 29 n 27 ARG 29 A ARG 30 n 28 ARG 30 A ARG 31 n 29 ARG 31 A GLN 32 n 30 GLN 32 A GLN 33 n 31 GLN 33 A LEU 34 n 32 LEU 34 A SER 35 n 33 SER 35 A SER 36 n 34 SER 36 A GLU 37 n 35 GLU 37 A LEU 38 n 36 LEU 38 A GLY 39 n 37 GLY 39 A LEU 40 n 38 LEU 40 A ASN 41 n 39 ASN 41 A GLU 42 n 40 GLU 42 A ALA 43 n 41 ALA 43 A GLN 44 n 42 GLN 44 A ILE 45 n 43 ILE 45 A LYS 46 n 44 LYS 46 A ILE 47 n 45 ILE 47 A TRP 48 n 46 TRP 48 A PHE 49 n 47 PHE 49 A ALA 50 n 48 ALA 50 A ASN 51 n 49 ASN 51 A LYS 52 n 50 LYS 52 A ARG 53 n 51 ARG 53 A ALA 54 n 52 ALA 54 A LYS 55 n 53 LYS 55 A ILE 56 n 54 ILE 56 A LYS 57 n 55 LYS 57 A LYS 58 n 56 LYS 58 A SER 59 n 57 SER 59 A ARG 103 n 1 ARG 103 B PRO 104 n 2 PRO 104 B ARG 105 n 3 ARG 105 B THR 106 n 4 THR 106 B ALA 107 n 5 ALA 107 B PHE 108 n 6 PHE 108 B SER 109 n 7 SER 109 B SER 110 n 8 SER 110 B GLU 111 n 9 GLU 111 B GLN 112 n 10 GLN 112 B LEU 113 n 11 LEU 113 B ALA 114 n 12 ALA 114 B ARG 115 n 13 ARG 115 B LEU 116 n 14 LEU 116 B LYS 117 n 15 LYS 117 B ARG 118 n 16 ARG 118 B GLU 119 n 17 GLU 119 B PHE 120 n 18 PHE 120 B ASN 121 n 19 ASN 121 B GLU 122 n 20 GLU 122 B ASN 123 n 21 ASN 123 B ARG 124 n 22 ARG 124 B TYR 125 n 23 TYR 125 B LEU 126 n 24 LEU 126 B THR 127 n 25 THR 127 B GLU 128 n 26 GLU 128 B ARG 129 n 27 ARG 129 B ARG 130 n 28 ARG 130 B ARG 131 n 29 ARG 131 B GLN 132 n 30 GLN 132 B GLN 133 n 31 GLN 133 B LEU 134 n 32 LEU 134 B SER 135 n 33 SER 135 B SER 136 n 34 SER 136 B GLU 137 n 35 GLU 137 B LEU 138 n 36 LEU 138 B GLY 139 n 37 GLY 139 B LEU 140 n 38 LEU 140 B ASN 141 n 39 ASN 141 B GLU 142 n 40 GLU 142 B ALA 143 n 41 ALA 143 B GLN 144 n 42 GLN 144 B ILE 145 n 43 ILE 145 B LYS 146 n 44 LYS 146 B ILE 147 n 45 ILE 147 B TRP 148 n 46 TRP 148 B PHE 149 n 47 PHE 149 B ALA 150 n 48 ALA 150 B ASN 151 n 49 ASN 151 B LYS 152 n 50 LYS 152 B ARG 153 n 51 ARG 153 B ALA 154 n 52 ALA 154 B LYS 155 n 53 LYS 155 B ILE 156 n 54 ILE 156 B LYS 157 n 55 LYS 157 B LYS 158 n 56 LYS 158 B n 57 159 B author_defined_assembly 4 tetrameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ARG 3 C ARG 1 1 Y 1 A PRO 4 C PRO 2 1 Y 1 A ARG 5 C ARG 3 1 Y 1 A THR 6 C THR 4 1 Y 1 B SER 159 D SER 57 1 Y 1 C DC 217 0.070 SIDE CHAIN 1 D DA 301 0.055 SIDE CHAIN 1 D DG 305 0.083 SIDE CHAIN 1 D DG 306 0.071 SIDE CHAIN 1 D DT 311 0.062 SIDE CHAIN 1 D DA 314 0.064 SIDE CHAIN 1 2.05 0.30 108.30 110.35 D D D O4' C1' N9 DG DG DG 305 305 305 N PARHCSDX.PRO TOPHCSDX.PRO DNA-RNA.PARAM TOPH19.SOL PARAM19.SOL DNA-RNA.TOP 39.7 0.2700000 0.006 0.2340000 0.2370000 0.2370000 2.00 20.00 2168 23204 21566 10.1 89.0 RANDOM 10000000.00 0.00 1 RESTRAINED THROUGHOUT 2.0 Engh & Huber 0.36 0.33 5.00 0.39 0.41 2.00 20.00 104 1889 0 855 930 0.007 1.2 18.4 1.44 2.71 1.50 4.07 2.00 4.80 2.00 7.33 2.50 0.3510000 0.025 0.3630000 2.13 203 2044 6 9.0 56.2 24.7 2.0 20 1DU0 23204 23204 0 0 0.0390000 1 4.9 95.5 0.3510000 2.00 2.07 1697 3 70.3 model building X-PLOR refinement X-PLOR 3.851 data reduction DENZO data scaling SCALEPACK phasing X-PLOR ENGRAILED HOMEODOMAIN Q50A VARIANT DNA COMPLEX 1 N N 2 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N A SER 9 C SER 7 HELX_P A ASN 23 C ASN 21 1 1 15 A THR 27 C THR 25 HELX_P A GLY 39 C GLY 37 1 2 13 A ASN 41 C ASN 39 HELX_P A LYS 57 C LYS 55 1 3 17 B SER 109 D SER 7 HELX_P B ASN 123 D ASN 21 1 4 15 B THR 127 D THR 25 HELX_P B GLY 139 D GLY 37 1 5 13 B ASN 141 D ASN 39 HELX_P B LYS 157 D LYS 55 1 6 17 hydrog WATSON-CRICK C DT 202 A N3 DT 2 1_555 D DA 321 B N1 DA 21 1_555 hydrog WATSON-CRICK C DT 202 A O4 DT 2 1_555 D DA 321 B N6 DA 21 1_555 hydrog WATSON-CRICK C DT 203 A N3 DT 3 1_555 D DA 320 B N1 DA 20 1_555 hydrog WATSON-CRICK C DT 203 A O4 DT 3 1_555 D DA 320 B N6 DA 20 1_555 hydrog WATSON-CRICK C DT 204 A N3 DT 4 1_555 D DA 319 B N1 DA 19 1_555 hydrog WATSON-CRICK C DT 204 A O4 DT 4 1_555 D DA 319 B N6 DA 19 1_555 hydrog WATSON-CRICK C DG 205 A N1 DG 5 1_555 D DC 318 B N3 DC 18 1_555 hydrog WATSON-CRICK C DG 205 A N2 DG 5 1_555 D DC 318 B O2 DC 18 1_555 hydrog WATSON-CRICK C DG 205 A O6 DG 5 1_555 D DC 318 B N4 DC 18 1_555 hydrog WATSON-CRICK C DC 206 A N3 DC 6 1_555 D DG 317 B N1 DG 17 1_555 hydrog WATSON-CRICK C DC 206 A N4 DC 6 1_555 D DG 317 B O6 DG 17 1_555 hydrog WATSON-CRICK C DC 206 A O2 DC 6 1_555 D DG 317 B N2 DG 17 1_555 hydrog WATSON-CRICK C DC 207 A N3 DC 7 1_555 D DG 316 B N1 DG 16 1_555 hydrog WATSON-CRICK C DC 207 A N4 DC 7 1_555 D DG 316 B O6 DG 16 1_555 hydrog WATSON-CRICK C DC 207 A O2 DC 7 1_555 D DG 316 B N2 DG 16 1_555 hydrog WATSON-CRICK C DA 208 A N1 DA 8 1_555 D DT 315 B N3 DT 15 1_555 hydrog WATSON-CRICK C DA 208 A N6 DA 8 1_555 D DT 315 B O4 DT 15 1_555 hydrog WATSON-CRICK C DT 209 A N3 DT 9 1_555 D DA 314 B N1 DA 14 1_555 hydrog WATSON-CRICK C DT 209 A O4 DT 9 1_555 D DA 314 B N6 DA 14 1_555 hydrog WATSON-CRICK C DG 210 A N1 DG 10 1_555 D DC 313 B N3 DC 13 1_555 hydrog WATSON-CRICK C DG 210 A N2 DG 10 1_555 D DC 313 B O2 DC 13 1_555 hydrog WATSON-CRICK C DG 210 A O6 DG 10 1_555 D DC 313 B N4 DC 13 1_555 hydrog WATSON-CRICK C DT 211 A N3 DT 11 1_555 D DA 312 B N1 DA 12 1_555 hydrog WATSON-CRICK C DT 211 A O4 DT 11 1_555 D DA 312 B N6 DA 12 1_555 hydrog WATSON-CRICK C DA 212 A N1 DA 12 1_555 D DT 311 B N3 DT 11 1_555 hydrog WATSON-CRICK C DA 212 A N6 DA 12 1_555 D DT 311 B O4 DT 11 1_555 hydrog WATSON-CRICK C DA 213 A N1 DA 13 1_555 D DT 310 B N3 DT 10 1_555 hydrog WATSON-CRICK C DA 213 A N6 DA 13 1_555 D DT 310 B O4 DT 10 1_555 hydrog WATSON-CRICK C DT 214 A N3 DT 14 1_555 D DA 309 B N1 DA 9 1_555 hydrog WATSON-CRICK C DT 214 A O4 DT 14 1_555 D DA 309 B N6 DA 9 1_555 hydrog WATSON-CRICK C DT 215 A N3 DT 15 1_555 D DA 308 B N1 DA 8 1_555 hydrog WATSON-CRICK C DT 215 A O4 DT 15 1_555 D DA 308 B N6 DA 8 1_555 hydrog WATSON-CRICK C DA 216 A N1 DA 16 1_555 D DT 307 B N3 DT 7 1_555 hydrog WATSON-CRICK C DA 216 A N6 DA 16 1_555 D DT 307 B O4 DT 7 1_555 hydrog WATSON-CRICK C DC 217 A N3 DC 17 1_555 D DG 306 B N1 DG 6 1_555 hydrog WATSON-CRICK C DC 217 A N4 DC 17 1_555 D DG 306 B O6 DG 6 1_555 hydrog WATSON-CRICK C DC 217 A O2 DC 17 1_555 D DG 306 B N2 DG 6 1_555 hydrog WATSON-CRICK C DC 218 A N3 DC 18 1_555 D DG 305 B N1 DG 5 1_555 hydrog WATSON-CRICK C DC 218 A N4 DC 18 1_555 D DG 305 B O6 DG 5 1_555 hydrog WATSON-CRICK C DC 218 A O2 DC 18 1_555 D DG 305 B N2 DG 5 1_555 hydrog WATSON-CRICK C DT 219 A N3 DT 19 1_555 D DA 304 B N1 DA 4 1_555 hydrog WATSON-CRICK C DT 219 A O4 DT 19 1_555 D DA 304 B N6 DA 4 1_555 hydrog WATSON-CRICK C DA 220 A N1 DA 20 1_555 D DT 303 B N3 DT 3 1_555 hydrog WATSON-CRICK C DA 220 A N6 DA 20 1_555 D DT 303 B O4 DT 3 1_555 hydrog WATSON-CRICK C DA 221 A N1 DA 21 1_555 D DT 302 B N3 DT 2 1_555 hydrog WATSON-CRICK C DA 221 A N6 DA 21 1_555 D DT 302 B O4 DT 2 1_555 TRANSCRIPTION/DNA homeodomain, DNA-binding protein, protein-DNA complex, TRANSCRIPTION-DNA COMPLEX HMEN_DROME UNP 3 456 P02836 1DU0 PDB 1 1DU0 1DU0 PDB 2 1DU0 456 512 1DU0 3 59 P02836 A 1 1 57 456 512 1DU0 103 159 P02836 B 1 1 57 201 221 1DU0 201 221 1DU0 C 2 1 21 301 321 1DU0 301 321 1DU0 D 3 1 21 1 GLN engineered mutation ALA 50 1DU0 A P02836 UNP 503 48 2 GLN engineered mutation ALA 150 1DU0 B P02836 UNP 503 48 5 monoclinic C 1 2 1