0.012531
0.007235
0.000000
0.000000
0.014470
0.000000
0.000000
0.000000
0.011501
0.00000
0.00000
0.00000
Prasad, G.S.
Stura, E.A.
Mcree, D.E.
Laco, G.S.
Hasselkus-Light, C.
Elder, J.H.
Stout, C.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
79.800
79.800
86.950
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
MG
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
R
C
N
310
N
O
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
N
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
N
360
N
O
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Protein Sci.
PRCIEI
0795
0961-8368
5
2429
2437
8976551
Crystal structure of dUTP pyrophosphatase from feline immunodeficiency virus.
1996
10.2210/pdb1dut/pdb
pdb_00001dut
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
IMAGE PLATE
MARRESEARCH
M
x-ray
1
1.08
1.0
BL7-1
SSRL
1.08
SYNCHROTRON
SSRL BEAMLINE BL7-1
14369.802
DUTP PYROPHOSPHATASE
3.6.1.23
2
man
polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
18.015
water
72
nat
water
DUTPASE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
no
no
MIIEGDGILDKRSEDAGYDLLAAKEIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKGLDVLGGVIDEGYRGEIGV
IMINVSRKSITLMERQKIAQLIILPCKHEVLEQGKVVMDSERGDNGYGSTGVF
MIIEGDGILDKRSEDAGYDLLAAKEIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKGLDVLGGVIDEGYRGEIGV
IMINVSRKSITLMERQKIAQLIILPCKHEVLEQGKVVMDSERGDNGYGSTGVF
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Lentivirus
Feline immunodeficiency virus
(isolate Petaluma)
cabbage looper
Trichoplusia
sample
11674
Feline immunodeficiency virus
TN5
7111
Trichoplusia ni
BACULOVIRUS
2.78
55.
diffrn_detector
pdbx_database_status
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Derived calculations
Source and taxonomy
Version format compliance
Atomic model
Data collection
Other
Data collection
Database references
Derived calculations
1
0
1997-01-27
1
1
2008-03-03
1
2
2011-07-13
1
3
2011-11-16
1
4
2018-03-21
1
5
2024-02-07
_diffrn_detector.pdbx_collection_date
_pdbx_database_status.process_site
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1996-09-15
REL
MG
MAGNESIUM ION
HOH
water
MG
1
2
MG
MG
134
A
MG
1
2
MG
MG
134
B
HOH
1
3
HOH
HOH
135
A
HOH
2
3
HOH
HOH
136
A
HOH
3
3
HOH
HOH
137
A
HOH
4
3
HOH
HOH
138
A
HOH
5
3
HOH
HOH
139
A
HOH
6
3
HOH
HOH
140
A
HOH
7
3
HOH
HOH
141
A
HOH
8
3
HOH
HOH
142
A
HOH
9
3
HOH
HOH
143
A
HOH
10
3
HOH
HOH
144
A
HOH
11
3
HOH
HOH
145
A
HOH
12
3
HOH
HOH
146
A
HOH
13
3
HOH
HOH
147
A
HOH
14
3
HOH
HOH
148
A
HOH
15
3
HOH
HOH
149
A
HOH
16
3
HOH
HOH
150
A
HOH
17
3
HOH
HOH
151
A
HOH
18
3
HOH
HOH
152
A
HOH
19
3
HOH
HOH
153
A
HOH
20
3
HOH
HOH
154
A
HOH
21
3
HOH
HOH
155
A
HOH
23
3
HOH
HOH
156
A
HOH
24
3
HOH
HOH
157
A
HOH
25
3
HOH
HOH
158
A
HOH
26
3
HOH
HOH
159
A
HOH
27
3
HOH
HOH
160
A
HOH
28
3
HOH
HOH
161
A
HOH
29
3
HOH
HOH
162
A
HOH
30
3
HOH
HOH
163
A
HOH
31
3
HOH
HOH
164
A
HOH
32
3
HOH
HOH
165
A
HOH
33
3
HOH
HOH
166
A
HOH
34
3
HOH
HOH
167
A
HOH
35
3
HOH
HOH
168
A
HOH
36
3
HOH
HOH
169
A
HOH
37
3
HOH
HOH
170
A
HOH
38
3
HOH
HOH
171
A
HOH
39
3
HOH
HOH
172
A
HOH
40
3
HOH
HOH
173
A
HOH
41
3
HOH
HOH
174
A
HOH
58
3
HOH
HOH
175
A
HOH
60
3
HOH
HOH
176
A
HOH
61
3
HOH
HOH
177
A
HOH
62
3
HOH
HOH
178
A
HOH
64
3
HOH
HOH
179
A
HOH
65
3
HOH
HOH
180
A
HOH
66
3
HOH
HOH
181
A
HOH
69
3
HOH
HOH
182
A
HOH
70
3
HOH
HOH
183
A
HOH
22
3
HOH
HOH
135
B
HOH
42
3
HOH
HOH
136
B
HOH
43
3
HOH
HOH
137
B
HOH
44
3
HOH
HOH
138
B
HOH
45
3
HOH
HOH
139
B
HOH
46
3
HOH
HOH
140
B
HOH
47
3
HOH
HOH
141
B
HOH
48
3
HOH
HOH
142
B
HOH
49
3
HOH
HOH
143
B
HOH
50
3
HOH
HOH
144
B
HOH
51
3
HOH
HOH
145
B
HOH
52
3
HOH
HOH
146
B
HOH
53
3
HOH
HOH
147
B
HOH
54
3
HOH
HOH
148
B
HOH
55
3
HOH
HOH
149
B
HOH
56
3
HOH
HOH
150
B
HOH
57
3
HOH
HOH
151
B
HOH
59
3
HOH
HOH
152
B
HOH
63
3
HOH
HOH
153
B
HOH
67
3
HOH
HOH
154
B
HOH
68
3
HOH
HOH
155
B
HOH
71
3
HOH
HOH
156
B
HOH
72
3
HOH
HOH
157
B
MET
1
n
1
MET
1
A
ILE
2
n
2
ILE
2
A
ILE
3
n
3
ILE
3
A
GLU
4
n
4
GLU
4
A
GLY
5
n
5
GLY
5
A
ASP
6
n
6
ASP
6
A
GLY
7
n
7
GLY
7
A
ILE
8
n
8
ILE
8
A
LEU
9
n
9
LEU
9
A
ASP
10
n
10
ASP
10
A
LYS
11
n
11
LYS
11
A
ARG
12
n
12
ARG
12
A
SER
13
n
13
SER
13
A
GLU
14
n
14
GLU
14
A
ASP
15
n
15
ASP
15
A
ALA
16
n
16
ALA
16
A
GLY
17
n
17
GLY
17
A
TYR
18
n
18
TYR
18
A
ASP
19
n
19
ASP
19
A
LEU
20
n
20
LEU
20
A
LEU
21
n
21
LEU
21
A
ALA
22
n
22
ALA
22
A
ALA
23
n
23
ALA
23
A
LYS
24
n
24
LYS
24
A
GLU
25
n
25
GLU
25
A
ILE
26
n
26
ILE
26
A
HIS
27
n
27
HIS
27
A
LEU
28
n
28
LEU
28
A
LEU
29
n
29
LEU
29
A
PRO
30
n
30
PRO
30
A
GLY
31
n
31
GLY
31
A
GLU
32
n
32
GLU
32
A
VAL
33
n
33
VAL
33
A
LYS
34
n
34
LYS
34
A
VAL
35
n
35
VAL
35
A
ILE
36
n
36
ILE
36
A
PRO
37
n
37
PRO
37
A
THR
38
n
38
THR
38
A
GLY
39
n
39
GLY
39
A
VAL
40
n
40
VAL
40
A
LYS
41
n
41
LYS
41
A
LEU
42
n
42
LEU
42
A
MET
43
n
43
MET
43
A
LEU
44
n
44
LEU
44
A
PRO
45
n
45
PRO
45
A
LYS
46
n
46
LYS
46
A
GLY
47
n
47
GLY
47
A
TYR
48
n
48
TYR
48
A
TRP
49
n
49
TRP
49
A
GLY
50
n
50
GLY
50
A
LEU
51
n
51
LEU
51
A
ILE
52
n
52
ILE
52
A
ILE
53
n
53
ILE
53
A
GLY
54
n
54
GLY
54
A
LYS
55
n
55
LYS
55
A
SER
56
n
56
SER
56
A
SER
57
n
57
SER
57
A
ILE
58
n
58
ILE
58
A
GLY
59
n
59
GLY
59
A
SER
60
n
60
SER
60
A
LYS
61
n
61
LYS
61
A
GLY
62
n
62
GLY
62
A
LEU
63
n
63
LEU
63
A
ASP
64
n
64
ASP
64
A
VAL
65
n
65
VAL
65
A
LEU
66
n
66
LEU
66
A
GLY
67
n
67
GLY
67
A
GLY
68
n
68
GLY
68
A
VAL
69
n
69
VAL
69
A
ILE
70
n
70
ILE
70
A
ASP
71
n
71
ASP
71
A
GLU
72
n
72
GLU
72
A
GLY
73
n
73
GLY
73
A
TYR
74
n
74
TYR
74
A
ARG
75
n
75
ARG
75
A
GLY
76
n
76
GLY
76
A
GLU
77
n
77
GLU
77
A
ILE
78
n
78
ILE
78
A
GLY
79
n
79
GLY
79
A
VAL
80
n
80
VAL
80
A
ILE
81
n
81
ILE
81
A
MET
82
n
82
MET
82
A
ILE
83
n
83
ILE
83
A
ASN
84
n
84
ASN
84
A
VAL
85
n
85
VAL
85
A
SER
86
n
86
SER
86
A
ARG
87
n
87
ARG
87
A
LYS
88
n
88
LYS
88
A
SER
89
n
89
SER
89
A
ILE
90
n
90
ILE
90
A
THR
91
n
91
THR
91
A
LEU
92
n
92
LEU
92
A
MET
93
n
93
MET
93
A
GLU
94
n
94
GLU
94
A
ARG
95
n
95
ARG
95
A
GLN
96
n
96
GLN
96
A
LYS
97
n
97
LYS
97
A
ILE
98
n
98
ILE
98
A
ALA
99
n
99
ALA
99
A
GLN
100
n
100
GLN
100
A
LEU
101
n
101
LEU
101
A
ILE
102
n
102
ILE
102
A
ILE
103
n
103
ILE
103
A
LEU
104
n
104
LEU
104
A
PRO
105
n
105
PRO
105
A
CYS
106
n
106
CYS
106
A
LYS
107
n
107
LYS
107
A
HIS
108
n
108
HIS
108
A
GLU
109
n
109
GLU
109
A
VAL
110
n
110
VAL
110
A
LEU
111
n
111
LEU
111
A
GLU
112
n
112
GLU
112
A
GLN
113
n
113
GLN
113
A
GLY
114
n
114
GLY
114
A
LYS
115
n
115
LYS
115
A
VAL
116
n
116
VAL
116
A
VAL
117
n
117
VAL
117
A
n
118
118
A
n
119
119
A
n
120
120
A
n
121
121
A
n
122
122
A
n
123
123
A
n
124
124
A
n
125
125
A
n
126
126
A
n
127
127
A
n
128
128
A
n
129
129
A
n
130
130
A
n
131
131
A
n
132
132
A
n
133
133
A
MET
1
n
1
MET
1
B
ILE
2
n
2
ILE
2
B
ILE
3
n
3
ILE
3
B
GLU
4
n
4
GLU
4
B
GLY
5
n
5
GLY
5
B
ASP
6
n
6
ASP
6
B
GLY
7
n
7
GLY
7
B
ILE
8
n
8
ILE
8
B
LEU
9
n
9
LEU
9
B
ASP
10
n
10
ASP
10
B
LYS
11
n
11
LYS
11
B
ARG
12
n
12
ARG
12
B
SER
13
n
13
SER
13
B
GLU
14
n
14
GLU
14
B
ASP
15
n
15
ASP
15
B
ALA
16
n
16
ALA
16
B
GLY
17
n
17
GLY
17
B
TYR
18
n
18
TYR
18
B
ASP
19
n
19
ASP
19
B
LEU
20
n
20
LEU
20
B
LEU
21
n
21
LEU
21
B
ALA
22
n
22
ALA
22
B
ALA
23
n
23
ALA
23
B
LYS
24
n
24
LYS
24
B
GLU
25
n
25
GLU
25
B
ILE
26
n
26
ILE
26
B
HIS
27
n
27
HIS
27
B
LEU
28
n
28
LEU
28
B
LEU
29
n
29
LEU
29
B
PRO
30
n
30
PRO
30
B
GLY
31
n
31
GLY
31
B
GLU
32
n
32
GLU
32
B
VAL
33
n
33
VAL
33
B
LYS
34
n
34
LYS
34
B
VAL
35
n
35
VAL
35
B
ILE
36
n
36
ILE
36
B
PRO
37
n
37
PRO
37
B
THR
38
n
38
THR
38
B
GLY
39
n
39
GLY
39
B
VAL
40
n
40
VAL
40
B
LYS
41
n
41
LYS
41
B
LEU
42
n
42
LEU
42
B
MET
43
n
43
MET
43
B
LEU
44
n
44
LEU
44
B
PRO
45
n
45
PRO
45
B
LYS
46
n
46
LYS
46
B
GLY
47
n
47
GLY
47
B
TYR
48
n
48
TYR
48
B
TRP
49
n
49
TRP
49
B
GLY
50
n
50
GLY
50
B
LEU
51
n
51
LEU
51
B
ILE
52
n
52
ILE
52
B
ILE
53
n
53
ILE
53
B
GLY
54
n
54
GLY
54
B
LYS
55
n
55
LYS
55
B
SER
56
n
56
SER
56
B
SER
57
n
57
SER
57
B
ILE
58
n
58
ILE
58
B
GLY
59
n
59
GLY
59
B
SER
60
n
60
SER
60
B
LYS
61
n
61
LYS
61
B
GLY
62
n
62
GLY
62
B
LEU
63
n
63
LEU
63
B
ASP
64
n
64
ASP
64
B
VAL
65
n
65
VAL
65
B
LEU
66
n
66
LEU
66
B
GLY
67
n
67
GLY
67
B
GLY
68
n
68
GLY
68
B
VAL
69
n
69
VAL
69
B
ILE
70
n
70
ILE
70
B
ASP
71
n
71
ASP
71
B
GLU
72
n
72
GLU
72
B
GLY
73
n
73
GLY
73
B
TYR
74
n
74
TYR
74
B
ARG
75
n
75
ARG
75
B
GLY
76
n
76
GLY
76
B
GLU
77
n
77
GLU
77
B
ILE
78
n
78
ILE
78
B
GLY
79
n
79
GLY
79
B
VAL
80
n
80
VAL
80
B
ILE
81
n
81
ILE
81
B
MET
82
n
82
MET
82
B
ILE
83
n
83
ILE
83
B
ASN
84
n
84
ASN
84
B
VAL
85
n
85
VAL
85
B
SER
86
n
86
SER
86
B
ARG
87
n
87
ARG
87
B
LYS
88
n
88
LYS
88
B
SER
89
n
89
SER
89
B
ILE
90
n
90
ILE
90
B
THR
91
n
91
THR
91
B
LEU
92
n
92
LEU
92
B
MET
93
n
93
MET
93
B
GLU
94
n
94
GLU
94
B
ARG
95
n
95
ARG
95
B
GLN
96
n
96
GLN
96
B
LYS
97
n
97
LYS
97
B
ILE
98
n
98
ILE
98
B
ALA
99
n
99
ALA
99
B
GLN
100
n
100
GLN
100
B
LEU
101
n
101
LEU
101
B
ILE
102
n
102
ILE
102
B
ILE
103
n
103
ILE
103
B
LEU
104
n
104
LEU
104
B
PRO
105
n
105
PRO
105
B
CYS
106
n
106
CYS
106
B
LYS
107
n
107
LYS
107
B
HIS
108
n
108
HIS
108
B
GLU
109
n
109
GLU
109
B
VAL
110
n
110
VAL
110
B
LEU
111
n
111
LEU
111
B
GLU
112
n
112
GLU
112
B
GLN
113
n
113
GLN
113
B
GLY
114
n
114
GLY
114
B
LYS
115
n
115
LYS
115
B
VAL
116
n
116
VAL
116
B
VAL
117
n
117
VAL
117
B
n
118
118
B
n
119
119
B
n
120
120
B
n
121
121
B
n
122
122
B
n
123
123
B
n
124
124
B
n
125
125
B
n
126
126
B
n
127
127
B
n
128
128
B
n
129
129
B
n
130
130
B
n
131
131
B
n
132
132
B
n
133
133
B
author_and_software_defined_assembly
PISA,PQS
3
trimeric
author_and_software_defined_assembly
PISA,PQS
3
trimeric
8790
-71
14530
9200
-93
13850
A
ASP
64
A
OD2
ASP
64
1_555
A
MG
134
C
MG
MG
1_555
A
ASP
64
A
OD2
ASP
64
2_555
95.2
A
ASP
64
A
OD2
ASP
64
1_555
A
MG
134
C
MG
MG
1_555
A
ASP
64
A
OD2
ASP
64
3_555
95.2
A
ASP
64
A
OD2
ASP
64
2_555
A
MG
134
C
MG
MG
1_555
A
ASP
64
A
OD2
ASP
64
3_555
95.2
A
ASP
64
A
OD2
ASP
64
1_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
1_555
86.5
A
ASP
64
A
OD2
ASP
64
2_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
1_555
86.2
A
ASP
64
A
OD2
ASP
64
3_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
1_555
177.8
A
ASP
64
A
OD2
ASP
64
1_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
2_555
177.8
A
ASP
64
A
OD2
ASP
64
2_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
2_555
86.5
A
ASP
64
A
OD2
ASP
64
3_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
2_555
86.2
A
HOH
147
E
O
HOH
1_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
2_555
92.1
A
ASP
64
A
OD2
ASP
64
1_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
3_555
86.2
A
ASP
64
A
OD2
ASP
64
2_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
3_555
177.8
A
ASP
64
A
OD2
ASP
64
3_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
3_555
86.5
A
HOH
147
E
O
HOH
1_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
3_555
92.1
A
HOH
147
E
O
HOH
2_555
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
3_555
92.1
B
ASP
64
B
OD2
ASP
64
1_555
B
MG
134
D
MG
MG
1_555
B
ASP
64
B
OD2
ASP
64
3_565
59.7
B
ASP
64
B
OD2
ASP
64
1_555
B
MG
134
D
MG
MG
1_555
B
ASP
64
B
OD2
ASP
64
2_665
59.5
B
ASP
64
B
OD2
ASP
64
3_565
B
MG
134
D
MG
MG
1_555
B
ASP
64
B
OD2
ASP
64
2_665
60.3
B
ASP
64
B
OD2
ASP
64
1_555
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
1_555
91.2
B
ASP
64
B
OD2
ASP
64
3_565
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
1_555
139.2
B
ASP
64
B
OD2
ASP
64
2_665
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
1_555
80.7
B
ASP
64
B
OD2
ASP
64
1_555
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
2_665
141.9
B
ASP
64
B
OD2
ASP
64
3_565
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
2_665
83.3
B
ASP
64
B
OD2
ASP
64
2_665
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
2_665
95.6
B
HOH
143
F
O
HOH
1_555
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
2_665
114.4
B
ASP
64
B
OD2
ASP
64
1_555
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
3_565
79.3
B
ASP
64
B
OD2
ASP
64
3_565
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
3_565
94.0
B
ASP
64
B
OD2
ASP
64
2_665
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
3_565
138.1
B
HOH
143
F
O
HOH
1_555
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
3_565
109.0
B
HOH
143
F
O
HOH
2_665
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
3_565
114.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_555
-y,x-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_555
-x+y,-x,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-y+1,x-y+1,z
crystal symmetry operation
39.9000000000
69.1088272220
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_565
-x+y,-x+1,z
crystal symmetry operation
-39.9000000000
69.1088272220
0.0000000000
A
O
ILE
26
A
O
ILE
26
A
N
LEU
92
A
N
LEU
92
A
O
LYS
34
A
O
LYS
34
A
N
MET
82
A
N
MET
82
A
O
ILE
81
A
O
ILE
81
A
N
LEU
66
A
N
LEU
66
A
O
TRP
49
A
O
TRP
49
A
N
LEU
104
A
N
LEU
104
A
O
ILE
98
A
O
ILE
98
A
N
LEU
20
A
N
LEU
20
B
O
ILE
2
B
O
ILE
2
B
N
MET
43
B
N
MET
43
B
O
ILE
26
B
O
ILE
26
B
N
LEU
92
B
N
LEU
92
B
O
LYS
34
B
O
LYS
34
B
N
MET
82
B
N
MET
82
B
O
ILE
81
B
O
ILE
81
B
N
LEU
66
B
N
LEU
66
B
O
TRP
49
B
O
TRP
49
B
N
LEU
104
B
N
LEU
104
B
O
ILE
98
B
O
ILE
98
B
N
LEU
20
B
N
LEU
20
1
A
MG
134
C
MG
1
B
MG
134
D
MG
1
A
MET
118
A
MET
118
1
Y
1
A
ASP
119
A
ASP
119
1
Y
1
A
SER
120
A
SER
120
1
Y
1
A
GLU
121
A
GLU
121
1
Y
1
A
ARG
122
A
ARG
122
1
Y
1
A
GLY
123
A
GLY
123
1
Y
1
A
ASP
124
A
ASP
124
1
Y
1
A
ASN
125
A
ASN
125
1
Y
1
A
GLY
126
A
GLY
126
1
Y
1
A
TYR
127
A
TYR
127
1
Y
1
A
GLY
128
A
GLY
128
1
Y
1
A
SER
129
A
SER
129
1
Y
1
A
THR
130
A
THR
130
1
Y
1
A
GLY
131
A
GLY
131
1
Y
1
A
VAL
132
A
VAL
132
1
Y
1
A
PHE
133
A
PHE
133
1
Y
1
B
MET
118
B
MET
118
1
Y
1
B
ASP
119
B
ASP
119
1
Y
1
B
SER
120
B
SER
120
1
Y
1
B
GLU
121
B
GLU
121
1
Y
1
B
ARG
122
B
ARG
122
1
Y
1
B
GLY
123
B
GLY
123
1
Y
1
B
ASP
124
B
ASP
124
1
Y
1
B
ASN
125
B
ASN
125
1
Y
1
B
GLY
126
B
GLY
126
1
Y
1
B
TYR
127
B
TYR
127
1
Y
1
B
GLY
128
B
GLY
128
1
Y
1
B
SER
129
B
SER
129
1
Y
1
B
THR
130
B
THR
130
1
Y
1
B
GLY
131
B
GLY
131
1
Y
1
B
VAL
132
B
VAL
132
1
Y
1
B
PHE
133
B
PHE
133
1
Y
1
-11.51
1.90
111.40
99.89
A
A
A
CB
CA
C
VAL
VAL
VAL
33
33
33
N
1
-15.64
2.00
111.60
95.96
A
A
A
CB
CA
C
ILE
ILE
ILE
83
83
83
N
1
-4.51
0.50
120.30
115.79
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
87
87
87
N
1
4.40
0.50
120.30
124.70
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
87
87
87
N
1
A
A
CB
SG
CYS
CYS
106
106
-0.098
0.016
1.812
1.714
N
1
B
B
CZ
NH1
ARG
ARG
12
12
0.095
0.013
1.326
1.421
N
1
B
B
CZ
NH2
ARG
ARG
12
12
0.087
0.013
1.326
1.413
N
1
B
B
CD
OE1
GLU
GLU
112
112
0.095
0.011
1.252
1.347
N
1
B
B
CD
OE2
GLU
GLU
112
112
0.097
0.011
1.252
1.349
N
1
B
VAL
85
-92.36
30.29
1
B
SER
86
-114.55
-169.37
DUTP PYROPHOSPHATASE IS AN INTERDIGITATED, FUNCTIONAL
TRIMER. IN THE STRUCTURE ONE TRIMER (CHAIN A) LIES ON A
CRYSTALLOGRAPHIC 6(3) AXIS AND ANOTHER TRIMER (CHAIN B)
LIES ON THE CRYSTALLOGRAPHIC THREE-FOLD AXIS. THE SPACE
GROUP IS P6(3) WITH 2 MONOMERS (CHAINS A AND B) IN THE
ASYMMETRIC UNIT. EACH MONOMER CONSISTS OF 117 RESIDUES
AND A MG2+ ION COORDINATED ON THE THREE-FOLD AXIS OF THE
TRIMER. THE C-TERMINAL 16 AMINO-ACIDS OF THE KNOWN
PRIMARY SEQUENCE ARE DISORDERED IN EACH UNIQUE MONOMER.
0.2490000
0.2090000
0.2090000
1.9
7.0
23522
1
0.0
1.9
7.0
72
1848
2
0
1774
0.015
2.4
1DUT
116665
0.0
0.0640000
1
4.96
96.3
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data reduction
MOSFLM
data reduction
CCP4
phasing
X-PLOR
3.1
FIV DUTP PYROPHOSPHATASE
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
SER
56
A
SER
56
HELX_P
A
LYS
61
A
LYS
61
1
1
6
B
SER
56
B
SER
56
HELX_P
B
LYS
61
B
LYS
61
1
2
6
metalc
2.010
A
ASP
64
A
OD2
ASP
64
1_555
A
MG
134
C
MG
MG
1_555
metalc
2.010
A
ASP
64
A
OD2
ASP
64
2_555
A
MG
134
C
MG
MG
1_555
metalc
2.010
A
ASP
64
A
OD2
ASP
64
3_555
A
MG
134
C
MG
MG
1_555
metalc
1.702
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
1_555
metalc
1.702
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
2_555
metalc
1.702
A
MG
134
C
MG
MG
1_555
A
HOH
147
E
O
HOH
3_555
metalc
2.775
B
ASP
64
B
OD2
ASP
64
1_555
B
MG
134
D
MG
MG
1_555
metalc
2.703
B
ASP
64
B
OD2
ASP
64
3_565
B
MG
134
D
MG
MG
1_555
metalc
2.725
B
ASP
64
B
OD2
ASP
64
2_665
B
MG
134
D
MG
MG
1_555
metalc
1.610
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
1_555
metalc
1.499
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
2_665
metalc
1.601
B
MG
134
D
MG
MG
1_555
B
HOH
143
F
O
HOH
3_565
ASPARTYL PROTEASE
POLYPROTEIN, HYDROLASE, ASPARTYL PROTEASE, ENDONUCLEASE, RNA-DIRECTED DNA POLYMERASE, NUCLEOTIDE METABOLISM, ACID ANHYDRIDE HYDROLASE
POL_FIVPE
UNP
1
1
P16088
KEFGKLEGGASCSPSESNAASSNAICTSNGGETIGFVNYNKVGTTTTLEKRPEILIFVNGYPIKFLLDTGADITILNRRD
FQVKNSIENGRQNMIGVGGGKRGTNYINVHLEIRDENYKTQCIFGNVCVLEDNSLIQPLLGRDNMIKFNIRLVMAQISDK
IPVVKVKMKDPNKGPQIKQWPLTNEKIEALTEIVERLEKEGKVKRADSNNPWNTPVFAIKKKSGKWRMLIDFRELNKLTE
KGAEVQLGLPHPAGLQIKKQVTVLDIGDAYFTIPLDPDYAPYTAFTLPRKNNAGPGRRFVWCSLPQGWILSPLIYQSTLD
NIIQPFIRQNPQLDIYQYMDDIYIGSNLSKKEHKEKVEELRKLLLWWGFETPEDKLQEEPPYTWMGYELHPLTWTIQQKQ
LDIPEQPTLNELQKLAGKINWASQAIPDLSIKALTNMMRGNQNLNSTRQWTKEARLEVQKAKKAIEEQVQLGYYDPSKEL
YAKLSLVGPHQISYQVYQKDPEKILWYGKMSRQKKKAENTCDIALRACYKIREESIIRIGKEPRYEIPTSREAWESNLIN
SPYLKAPPPEVEYIHAALNIKRALSMIKDAPIPGAETWYIDGGRKLGKAAKAAYWTDTGKWRVMDLEGSNQKAEIQALLL
ALKAGSEEMNIITDSQYVINIILQQPDMMEGIWQEVLEELEKKTAIFIDWVPGHKGIPGNEEVDKLCQTMMIIEGDGILD
KRSEDAGYDLLAAKEIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKGLDVLGGVIDEGYRGEIGVIMINVSRKSI
TLMERQKIAQLIILPCKHEVLEQGKVVMDSERGDNGYGSTGVFSSWVDRIEEAEINHEKFHSDPQYLRTEFNLPKMVAEE
IRRKCPVCRIIGEQVGGQLKIGPGIWQMDCTHFDGKIILVGIHVESGYIWAQIISQETADCTVKAVLQLLSAHNVTELQT
DNGPNFKNQKMEGVLNYMGVKHKFGIPGNPQSQALVENVNHTLKVWIQKFLPETTSLDNALSLAVHSLNFKRRGRIGGMA
PYELLAQQESLRIQDYFSAIPQKLQAQWIYYKDQKDKKWKGPMRVEYWGQGSVLLKDEEKGYFLIPRRHIRRVPEPCALP
EGDE
711
843
1DUT
1
133
P16088
A
1
1
133
711
843
1DUT
1
133
P16088
B
1
1
133
2
3
3
2
2
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
26
A
ILE
26
A
LEU
28
A
LEU
28
A
ILE
90
A
ILE
90
A
LEU
92
A
LEU
92
A
VAL
33
A
VAL
33
A
PRO
37
A
PRO
37
A
GLY
79
A
GLY
79
A
ASN
84
A
ASN
84
A
LEU
63
A
LEU
63
A
LEU
66
A
LEU
66
A
TYR
48
A
TYR
48
A
GLY
54
A
GLY
54
A
LYS
97
A
LYS
97
A
PRO
105
A
PRO
105
A
GLY
17
A
GLY
17
A
LEU
21
A
LEU
21
B
ILE
2
B
ILE
2
B
GLU
4
B
GLU
4
B
LYS
41
B
LYS
41
B
MET
43
B
MET
43
B
ILE
26
B
ILE
26
B
LEU
28
B
LEU
28
B
ILE
90
B
ILE
90
B
LEU
92
B
LEU
92
B
VAL
33
B
VAL
33
B
PRO
37
B
PRO
37
B
GLY
79
B
GLY
79
B
ASN
84
B
ASN
84
B
LEU
63
B
LEU
63
B
LEU
66
B
LEU
66
B
TYR
48
B
TYR
48
B
GLY
54
B
GLY
54
B
LYS
97
B
LYS
97
B
PRO
105
B
PRO
105
B
GLY
17
B
GLY
17
B
LEU
21
B
LEU
21
BINDING SITE FOR RESIDUE MG A 134
A
MG
134
Software
6
BINDING SITE FOR RESIDUE MG B 134
B
MG
134
Software
6
A
ASP
64
A
ASP
64
6
1_555
A
ASP
64
A
ASP
64
6
2_555
A
ASP
64
A
ASP
64
6
3_555
A
HOH
147
E
HOH
6
2_555
A
HOH
147
E
HOH
6
3_555
A
HOH
147
E
HOH
6
1_555
B
ASP
64
B
ASP
64
6
1_555
B
ASP
64
B
ASP
64
6
3_565
B
ASP
64
B
ASP
64
6
2_665
B
HOH
143
F
HOH
6
1_555
B
HOH
143
F
HOH
6
3_565
B
HOH
143
F
HOH
6
2_665
173
P 63