0.020921
0.000000
0.000000
0.000000
0.013624
0.000000
0.000000
0.000000
0.008418
0.00000
0.00000
0.00000
CIS PROLINE - PRO A 92
CIS PROLINE - PRO B 92
Schlauderer, G.J.
Schulz, G.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
47.800
73.400
118.800
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C11 H16 F2 N5 O12 P3
541.189
PHOSPHODIFLUOROMETHYLPHOSPHONIC ACID-ADENYLATE ESTER
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
P
N
75
N
O
N
76
N
O
N
77
N
O
N
78
R
P
N
79
N
O
N
80
N
O
N
81
N
C
N
82
N
F
N
83
N
F
N
84
R
P
N
85
N
O
N
86
N
O
N
87
N
O
N
88
N
O
N
89
N
C
N
90
R
C
N
91
N
O
N
92
S
C
N
93
N
O
N
94
R
C
N
95
N
O
N
96
R
C
Y
97
N
N
Y
98
N
C
Y
99
N
N
Y
100
N
C
Y
101
N
C
N
102
N
N
Y
103
N
N
Y
104
N
C
Y
105
N
N
Y
106
N
C
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
R
C
N
125
N
C
N
126
N
O
N
127
N
C
N
128
N
S
N
129
N
O
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
C
N
143
N
C
N
144
N
O
N
145
N
N
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
N
N
158
S
C
N
159
N
C
N
160
N
O
N
161
N
C
N
162
N
C
N
163
N
C
N
164
N
O
N
165
N
O
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
N
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
O
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
N
N
187
S
C
N
188
N
C
N
189
N
O
N
190
N
C
Y
191
N
C
Y
192
N
N
Y
193
N
C
Y
194
N
C
Y
195
N
N
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
S
C
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
N
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
N
284
N
C
N
285
N
S
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
N
N
300
S
C
N
301
N
C
N
302
N
O
N
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
N
327
N
C
N
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
N
344
N
O
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
R
C
N
358
N
O
N
359
N
C
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
N
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
N
N
398
S
C
N
399
N
C
N
400
N
O
N
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
N
408
N
O
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
N
N
422
S
C
N
423
N
C
N
424
N
O
N
425
N
C
N
426
N
C
N
427
N
C
N
428
N
O
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
Y
191
N
sing
Y
192
N
doub
Y
193
N
doub
N
194
N
sing
Y
195
N
sing
N
196
N
sing
Y
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
Y
299
N
doub
Y
300
N
sing
Y
301
N
sing
N
302
N
sing
Y
303
N
doub
N
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
doub
Y
373
N
sing
Y
374
N
sing
N
375
N
sing
Y
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
doub
N
380
N
sing
Y
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
doub
N
401
N
sing
Y
402
N
doub
N
403
N
sing
Y
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
256
223
227
10.1006/jmbi.1996.0080
8594191
Structure of a mutant adenylate kinase ligated with an ATP-analogue showing domain closure over ATP.
1996
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
231
405
Stability, Activity and Structure of Adenylate Kinase Mutants
1995
US
Protein Sci.
PRCIEI
0795
0961-8368
4
1262
High-Resolution Structures of Adenylate Kinase from Yeast Ligated with Inhibitor Ap5A, Showing the Pathway of Phosphoryl Transfer
1995
UK
Structure
STRUE6
2005
0969-2126
3
483
Movie of the Structural Changes During a Catalytic Cycle of Nucleoside Monophosphate Kinases
1995
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
15
7187
The C-DNA Sequence Encoding Cytosolic Adenylate Kinase from Baker'S Yeast (Saccharomyces Cerevisiae)
1987
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
195
649
Structure of the Complex of Yeast Adenylate Kinase with the Inhibitor Ap5A at 2.6 Angstroms Resolution
1987
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
155
111
The Complete Amino Acid Sequence of Adenylate Kinase from Baker'S Yeast
1986
10.2210/pdb1dvr/pdb
pdb_00001dvr
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
AREA DETECTOR
1991
SIEMENS
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
24008.525
ADENYLATE KINASE
2.7.4.3
D89V, R165I
2
man
polymer
541.189
PHOSPHODIFLUOROMETHYLPHOSPHONIC ACID-ADENYLATE ESTER
2
syn
non-polymer
18.015
water
161
nat
water
ATP:AMP-PHOSPHOTRANSFERASE, MYOKINASE
no
no
SSESIRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNP
ACKNGFILVGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGE
ALVQISDDNADALKKRLAAYHAQTEPIVDFYKKTGIWAGVDASQPPATVWADILNKLGKN
SSESIRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNP
ACKNGFILVGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGE
ALVQISDDNADALKKRLAAYHAQTEPIVDFYKKTGIWAGVDASQPPATVWADILNKLGKN
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
baker's yeast
Saccharomyces
Escherichia
sample
CYTOSOL
4932
Saccharomyces cerevisiae
562
Escherichia coli
HB101
PUAKYI
2.17
43.29
diffrn_source
pdbx_database_status
pdbx_unobs_or_zero_occ_atoms
database_2
pdbx_unobs_or_zero_occ_atoms
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Advisory
Data collection
Other
Advisory
Database references
Derived calculations
Data collection
1
0
1996-04-03
1
1
2008-03-24
1
2
2011-07-13
1
3
2018-04-04
1
4
2021-11-03
1
5
2024-02-07
_diffrn_source.type
_pdbx_database_status.process_site
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
SHEET
THE HELIX AND SHEET ASSIGNMENTS BELOW ARE AUTOMATIC
WITH PROGRAM DSSP.
Y
BNL
1995-12-14
REL
REL
ATF
PHOSPHODIFLUOROMETHYLPHOSPHONIC ACID-ADENYLATE ESTER
HOH
water
ATF
230
2
ATF
ATF
230
A
ATF
230
2
ATF
ATF
230
B
HOH
301
3
HOH
HOH
231
A
HOH
302
3
HOH
HOH
232
A
HOH
303
3
HOH
HOH
233
A
HOH
304
3
HOH
HOH
234
A
HOH
305
3
HOH
HOH
235
A
HOH
306
3
HOH
HOH
236
A
HOH
307
3
HOH
HOH
237
A
HOH
308
3
HOH
HOH
238
A
HOH
309
3
HOH
HOH
239
A
HOH
310
3
HOH
HOH
240
A
HOH
311
3
HOH
HOH
241
A
HOH
312
3
HOH
HOH
242
A
HOH
313
3
HOH
HOH
243
A
HOH
314
3
HOH
HOH
244
A
HOH
315
3
HOH
HOH
245
A
HOH
316
3
HOH
HOH
246
A
HOH
317
3
HOH
HOH
247
A
HOH
318
3
HOH
HOH
248
A
HOH
319
3
HOH
HOH
249
A
HOH
320
3
HOH
HOH
250
A
HOH
321
3
HOH
HOH
251
A
HOH
322
3
HOH
HOH
252
A
HOH
323
3
HOH
HOH
253
A
HOH
324
3
HOH
HOH
254
A
HOH
325
3
HOH
HOH
255
A
HOH
328
3
HOH
HOH
256
A
HOH
329
3
HOH
HOH
257
A
HOH
330
3
HOH
HOH
258
A
HOH
331
3
HOH
HOH
259
A
HOH
332
3
HOH
HOH
260
A
HOH
333
3
HOH
HOH
261
A
HOH
334
3
HOH
HOH
262
A
HOH
335
3
HOH
HOH
263
A
HOH
338
3
HOH
HOH
264
A
HOH
339
3
HOH
HOH
265
A
HOH
340
3
HOH
HOH
266
A
HOH
341
3
HOH
HOH
267
A
HOH
342
3
HOH
HOH
268
A
HOH
343
3
HOH
HOH
269
A
HOH
344
3
HOH
HOH
270
A
HOH
345
3
HOH
HOH
271
A
HOH
346
3
HOH
HOH
272
A
HOH
347
3
HOH
HOH
273
A
HOH
348
3
HOH
HOH
274
A
HOH
349
3
HOH
HOH
275
A
HOH
350
3
HOH
HOH
276
A
HOH
351
3
HOH
HOH
277
A
HOH
352
3
HOH
HOH
278
A
HOH
353
3
HOH
HOH
279
A
HOH
354
3
HOH
HOH
280
A
HOH
355
3
HOH
HOH
281
A
HOH
356
3
HOH
HOH
282
A
HOH
357
3
HOH
HOH
283
A
HOH
358
3
HOH
HOH
284
A
HOH
359
3
HOH
HOH
285
A
HOH
360
3
HOH
HOH
286
A
HOH
361
3
HOH
HOH
287
A
HOH
362
3
HOH
HOH
288
A
HOH
363
3
HOH
HOH
289
A
HOH
364
3
HOH
HOH
290
A
HOH
365
3
HOH
HOH
291
A
HOH
366
3
HOH
HOH
292
A
HOH
367
3
HOH
HOH
293
A
HOH
368
3
HOH
HOH
294
A
HOH
369
3
HOH
HOH
295
A
HOH
370
3
HOH
HOH
296
A
HOH
371
3
HOH
HOH
297
A
HOH
372
3
HOH
HOH
298
A
HOH
373
3
HOH
HOH
299
A
HOH
374
3
HOH
HOH
300
A
HOH
375
3
HOH
HOH
301
A
HOH
376
3
HOH
HOH
302
A
HOH
377
3
HOH
HOH
303
A
HOH
378
3
HOH
HOH
304
A
HOH
379
3
HOH
HOH
305
A
HOH
380
3
HOH
HOH
306
A
HOH
381
3
HOH
HOH
307
A
HOH
382
3
HOH
HOH
308
A
HOH
383
3
HOH
HOH
309
A
HOH
384
3
HOH
HOH
310
A
HOH
385
3
HOH
HOH
311
A
HOH
386
3
HOH
HOH
312
A
HOH
387
3
HOH
HOH
313
A
HOH
360
3
HOH
HOH
314
A
HOH
326
3
HOH
HOH
231
B
HOH
327
3
HOH
HOH
232
B
HOH
336
3
HOH
HOH
233
B
HOH
337
3
HOH
HOH
234
B
HOH
301
3
HOH
HOH
235
B
HOH
302
3
HOH
HOH
236
B
HOH
303
3
HOH
HOH
237
B
HOH
304
3
HOH
HOH
238
B
HOH
305
3
HOH
HOH
239
B
HOH
306
3
HOH
HOH
240
B
HOH
307
3
HOH
HOH
241
B
HOH
308
3
HOH
HOH
242
B
HOH
309
3
HOH
HOH
243
B
HOH
310
3
HOH
HOH
244
B
HOH
311
3
HOH
HOH
245
B
HOH
312
3
HOH
HOH
246
B
HOH
313
3
HOH
HOH
247
B
HOH
314
3
HOH
HOH
248
B
HOH
315
3
HOH
HOH
249
B
HOH
316
3
HOH
HOH
250
B
HOH
317
3
HOH
HOH
251
B
HOH
318
3
HOH
HOH
252
B
HOH
319
3
HOH
HOH
253
B
HOH
320
3
HOH
HOH
254
B
HOH
321
3
HOH
HOH
255
B
HOH
322
3
HOH
HOH
256
B
HOH
323
3
HOH
HOH
257
B
HOH
324
3
HOH
HOH
258
B
HOH
325
3
HOH
HOH
259
B
HOH
326
3
HOH
HOH
260
B
HOH
327
3
HOH
HOH
261
B
HOH
328
3
HOH
HOH
262
B
HOH
329
3
HOH
HOH
263
B
HOH
330
3
HOH
HOH
264
B
HOH
331
3
HOH
HOH
265
B
HOH
332
3
HOH
HOH
266
B
HOH
333
3
HOH
HOH
267
B
HOH
334
3
HOH
HOH
268
B
HOH
335
3
HOH
HOH
269
B
HOH
336
3
HOH
HOH
270
B
HOH
337
3
HOH
HOH
271
B
HOH
338
3
HOH
HOH
272
B
HOH
339
3
HOH
HOH
273
B
HOH
340
3
HOH
HOH
274
B
HOH
341
3
HOH
HOH
275
B
HOH
342
3
HOH
HOH
276
B
HOH
343
3
HOH
HOH
277
B
HOH
344
3
HOH
HOH
278
B
HOH
345
3
HOH
HOH
279
B
HOH
346
3
HOH
HOH
280
B
HOH
347
3
HOH
HOH
281
B
HOH
348
3
HOH
HOH
282
B
HOH
349
3
HOH
HOH
283
B
HOH
350
3
HOH
HOH
284
B
HOH
351
3
HOH
HOH
285
B
HOH
352
3
HOH
HOH
286
B
HOH
353
3
HOH
HOH
287
B
HOH
354
3
HOH
HOH
288
B
HOH
355
3
HOH
HOH
289
B
HOH
356
3
HOH
HOH
290
B
HOH
357
3
HOH
HOH
291
B
HOH
358
3
HOH
HOH
292
B
HOH
359
3
HOH
HOH
293
B
HOH
361
3
HOH
HOH
294
B
HOH
362
3
HOH
HOH
295
B
HOH
363
3
HOH
HOH
296
B
HOH
364
3
HOH
HOH
297
B
HOH
365
3
HOH
HOH
298
B
HOH
366
3
HOH
HOH
299
B
HOH
367
3
HOH
HOH
300
B
HOH
368
3
HOH
HOH
301
B
HOH
369
3
HOH
HOH
302
B
HOH
370
3
HOH
HOH
303
B
HOH
371
3
HOH
HOH
304
B
HOH
372
3
HOH
HOH
305
B
HOH
373
3
HOH
HOH
306
B
HOH
374
3
HOH
HOH
307
B
SER
1
n
1
SER
1
A
SER
2
n
2
SER
2
A
GLU
3
n
3
GLU
3
A
SER
4
n
4
SER
4
A
ILE
5
n
5
ILE
5
A
ARG
6
n
6
ARG
6
A
MET
7
n
7
MET
7
A
VAL
8
n
8
VAL
8
A
LEU
9
n
9
LEU
9
A
ILE
10
n
10
ILE
10
A
GLY
11
n
11
GLY
11
A
PRO
12
n
12
PRO
12
A
PRO
13
n
13
PRO
13
A
GLY
14
n
14
GLY
14
A
ALA
15
n
15
ALA
15
A
GLY
16
n
16
GLY
16
A
LYS
17
n
17
LYS
17
A
GLY
18
n
18
GLY
18
A
THR
19
n
19
THR
19
A
GLN
20
n
20
GLN
20
A
ALA
21
n
21
ALA
21
A
PRO
22
n
22
PRO
22
A
ASN
23
n
23
ASN
23
A
LEU
24
n
24
LEU
24
A
GLN
25
n
25
GLN
25
A
GLU
26
n
26
GLU
26
A
ARG
27
n
27
ARG
27
A
PHE
28
n
28
PHE
28
A
HIS
29
n
29
HIS
29
A
ALA
30
n
30
ALA
30
A
ALA
31
n
31
ALA
31
A
HIS
32
n
32
HIS
32
A
LEU
33
n
33
LEU
33
A
ALA
34
n
34
ALA
34
A
THR
35
n
35
THR
35
A
GLY
36
n
36
GLY
36
A
ASP
37
n
37
ASP
37
A
MET
38
n
38
MET
38
A
LEU
39
n
39
LEU
39
A
ARG
40
n
40
ARG
40
A
SER
41
n
41
SER
41
A
GLN
42
n
42
GLN
42
A
ILE
43
n
43
ILE
43
A
ALA
44
n
44
ALA
44
A
LYS
45
n
45
LYS
45
A
GLY
46
n
46
GLY
46
A
THR
47
n
47
THR
47
A
GLN
48
n
48
GLN
48
A
LEU
49
n
49
LEU
49
A
GLY
50
n
50
GLY
50
A
LEU
51
n
51
LEU
51
A
GLU
52
n
52
GLU
52
A
ALA
53
n
53
ALA
53
A
LYS
54
n
54
LYS
54
A
LYS
55
n
55
LYS
55
A
ILE
56
n
56
ILE
56
A
MET
57
n
57
MET
57
A
ASP
58
n
58
ASP
58
A
GLN
59
n
59
GLN
59
A
GLY
60
n
60
GLY
60
A
GLY
61
n
61
GLY
61
A
LEU
62
n
62
LEU
62
A
VAL
63
n
63
VAL
63
A
SER
64
n
64
SER
64
A
ASP
65
n
65
ASP
65
A
ASP
66
n
66
ASP
66
A
ILE
67
n
67
ILE
67
A
MET
68
n
68
MET
68
A
VAL
69
n
69
VAL
69
A
ASN
70
n
70
ASN
70
A
MET
71
n
71
MET
71
A
ILE
72
n
72
ILE
72
A
LYS
73
n
73
LYS
73
A
ASP
74
n
74
ASP
74
A
GLU
75
n
75
GLU
75
A
LEU
76
n
76
LEU
76
A
THR
77
n
77
THR
77
A
ASN
78
n
78
ASN
78
A
ASN
79
n
79
ASN
79
A
PRO
80
n
80
PRO
80
A
ALA
81
n
81
ALA
81
A
CYS
82
n
82
CYS
82
A
LYS
83
n
83
LYS
83
A
ASN
84
n
84
ASN
84
A
GLY
85
n
85
GLY
85
A
PHE
86
n
86
PHE
86
A
ILE
87
n
87
ILE
87
A
LEU
88
n
88
LEU
88
A
VAL
89
n
89
VAL
89
A
GLY
90
n
90
GLY
90
A
PHE
91
n
91
PHE
91
A
PRO
92
n
92
PRO
92
A
ARG
93
n
93
ARG
93
A
THR
94
n
94
THR
94
A
ILE
95
n
95
ILE
95
A
PRO
96
n
96
PRO
96
A
GLN
97
n
97
GLN
97
A
ALA
98
n
98
ALA
98
A
GLU
99
n
99
GLU
99
A
LYS
100
n
100
LYS
100
A
LEU
101
n
101
LEU
101
A
ASP
102
n
102
ASP
102
A
GLN
103
n
103
GLN
103
A
MET
104
n
104
MET
104
A
LEU
105
n
105
LEU
105
A
LYS
106
n
106
LYS
106
A
GLU
107
n
107
GLU
107
A
GLN
108
n
108
GLN
108
A
GLY
109
n
109
GLY
109
A
THR
110
n
110
THR
110
A
PRO
111
n
111
PRO
111
A
LEU
112
n
112
LEU
112
A
GLU
113
n
113
GLU
113
A
LYS
114
n
114
LYS
114
A
ALA
115
n
115
ALA
115
A
ILE
116
n
116
ILE
116
A
GLU
117
n
117
GLU
117
A
LEU
118
n
118
LEU
118
A
LYS
119
n
119
LYS
119
A
VAL
120
n
120
VAL
120
A
ASP
121
n
121
ASP
121
A
ASP
122
n
122
ASP
122
A
GLU
123
n
123
GLU
123
A
LEU
124
n
124
LEU
124
A
LEU
125
n
125
LEU
125
A
VAL
126
n
126
VAL
126
A
ALA
127
n
127
ALA
127
A
ARG
128
n
128
ARG
128
A
ILE
129
n
129
ILE
129
A
THR
130
n
130
THR
130
A
GLY
131
n
131
GLY
131
A
ARG
132
n
132
ARG
132
A
LEU
133
n
133
LEU
133
A
ILE
134
n
134
ILE
134
A
HIS
135
n
135
HIS
135
A
PRO
136
n
136
PRO
136
A
ALA
137
n
137
ALA
137
A
SER
138
n
138
SER
138
A
GLY
139
n
139
GLY
139
A
ARG
140
n
140
ARG
140
A
SER
141
n
141
SER
141
A
TYR
142
n
142
TYR
142
A
HIS
143
n
143
HIS
143
A
LYS
144
n
144
LYS
144
A
ILE
145
n
145
ILE
145
A
PHE
146
n
146
PHE
146
A
ASN
147
n
147
ASN
147
A
PRO
148
n
148
PRO
148
A
PRO
149
n
149
PRO
149
A
LYS
150
n
150
LYS
150
A
GLU
151
n
151
GLU
151
A
ASP
152
n
152
ASP
152
A
MET
153
n
153
MET
153
A
LYS
154
n
154
LYS
154
A
ASP
155
n
155
ASP
155
A
ASP
156
n
156
ASP
156
A
VAL
157
n
157
VAL
157
A
THR
158
n
158
THR
158
A
GLY
159
n
159
GLY
159
A
GLU
160
n
160
GLU
160
A
ALA
161
n
161
ALA
161
A
LEU
162
n
162
LEU
162
A
VAL
163
n
163
VAL
163
A
GLN
164
n
164
GLN
164
A
ILE
165
n
165
ILE
165
A
SER
166
n
166
SER
166
A
ASP
167
n
167
ASP
167
A
ASP
168
n
168
ASP
168
A
ASN
169
n
169
ASN
169
A
ALA
170
n
170
ALA
170
A
ASP
171
n
171
ASP
171
A
ALA
172
n
172
ALA
172
A
LEU
173
n
173
LEU
173
A
LYS
174
n
174
LYS
174
A
LYS
175
n
175
LYS
175
A
ARG
176
n
176
ARG
176
A
LEU
177
n
177
LEU
177
A
ALA
178
n
178
ALA
178
A
ALA
179
n
179
ALA
179
A
TYR
180
n
180
TYR
180
A
HIS
181
n
181
HIS
181
A
ALA
182
n
182
ALA
182
A
GLN
183
n
183
GLN
183
A
THR
184
n
184
THR
184
A
GLU
185
n
185
GLU
185
A
PRO
186
n
186
PRO
186
A
ILE
187
n
187
ILE
187
A
VAL
188
n
188
VAL
188
A
ASP
189
n
189
ASP
189
A
PHE
190
n
190
PHE
190
A
TYR
191
n
191
TYR
191
A
LYS
192
n
192
LYS
192
A
LYS
193
n
193
LYS
193
A
THR
194
n
194
THR
194
A
GLY
195
n
195
GLY
195
A
ILE
196
n
196
ILE
196
A
TRP
197
n
197
TRP
197
A
ALA
198
n
198
ALA
198
A
GLY
199
n
199
GLY
199
A
VAL
200
n
200
VAL
200
A
ASP
201
n
201
ASP
201
A
ALA
202
n
202
ALA
202
A
SER
203
n
203
SER
203
A
GLN
204
n
204
GLN
204
A
PRO
205
n
205
PRO
205
A
PRO
206
n
206
PRO
206
A
ALA
207
n
207
ALA
207
A
THR
208
n
208
THR
208
A
VAL
209
n
209
VAL
209
A
TRP
210
n
210
TRP
210
A
ALA
211
n
211
ALA
211
A
ASP
212
n
212
ASP
212
A
ILE
213
n
213
ILE
213
A
LEU
214
n
214
LEU
214
A
ASN
215
n
215
ASN
215
A
LYS
216
n
216
LYS
216
A
LEU
217
n
217
LEU
217
A
GLY
218
n
218
GLY
218
A
LYS
219
n
219
LYS
219
A
ASN
220
n
220
ASN
220
A
SER
1
n
1
SER
1
B
SER
2
n
2
SER
2
B
GLU
3
n
3
GLU
3
B
SER
4
n
4
SER
4
B
ILE
5
n
5
ILE
5
B
ARG
6
n
6
ARG
6
B
MET
7
n
7
MET
7
B
VAL
8
n
8
VAL
8
B
LEU
9
n
9
LEU
9
B
ILE
10
n
10
ILE
10
B
GLY
11
n
11
GLY
11
B
PRO
12
n
12
PRO
12
B
PRO
13
n
13
PRO
13
B
GLY
14
n
14
GLY
14
B
ALA
15
n
15
ALA
15
B
GLY
16
n
16
GLY
16
B
LYS
17
n
17
LYS
17
B
GLY
18
n
18
GLY
18
B
THR
19
n
19
THR
19
B
GLN
20
n
20
GLN
20
B
ALA
21
n
21
ALA
21
B
PRO
22
n
22
PRO
22
B
ASN
23
n
23
ASN
23
B
LEU
24
n
24
LEU
24
B
GLN
25
n
25
GLN
25
B
GLU
26
n
26
GLU
26
B
ARG
27
n
27
ARG
27
B
PHE
28
n
28
PHE
28
B
HIS
29
n
29
HIS
29
B
ALA
30
n
30
ALA
30
B
ALA
31
n
31
ALA
31
B
HIS
32
n
32
HIS
32
B
LEU
33
n
33
LEU
33
B
ALA
34
n
34
ALA
34
B
THR
35
n
35
THR
35
B
GLY
36
n
36
GLY
36
B
ASP
37
n
37
ASP
37
B
MET
38
n
38
MET
38
B
LEU
39
n
39
LEU
39
B
ARG
40
n
40
ARG
40
B
SER
41
n
41
SER
41
B
GLN
42
n
42
GLN
42
B
ILE
43
n
43
ILE
43
B
ALA
44
n
44
ALA
44
B
LYS
45
n
45
LYS
45
B
GLY
46
n
46
GLY
46
B
THR
47
n
47
THR
47
B
GLN
48
n
48
GLN
48
B
LEU
49
n
49
LEU
49
B
GLY
50
n
50
GLY
50
B
LEU
51
n
51
LEU
51
B
GLU
52
n
52
GLU
52
B
ALA
53
n
53
ALA
53
B
LYS
54
n
54
LYS
54
B
LYS
55
n
55
LYS
55
B
ILE
56
n
56
ILE
56
B
MET
57
n
57
MET
57
B
ASP
58
n
58
ASP
58
B
GLN
59
n
59
GLN
59
B
GLY
60
n
60
GLY
60
B
GLY
61
n
61
GLY
61
B
LEU
62
n
62
LEU
62
B
VAL
63
n
63
VAL
63
B
SER
64
n
64
SER
64
B
ASP
65
n
65
ASP
65
B
ASP
66
n
66
ASP
66
B
ILE
67
n
67
ILE
67
B
MET
68
n
68
MET
68
B
VAL
69
n
69
VAL
69
B
ASN
70
n
70
ASN
70
B
MET
71
n
71
MET
71
B
ILE
72
n
72
ILE
72
B
LYS
73
n
73
LYS
73
B
ASP
74
n
74
ASP
74
B
GLU
75
n
75
GLU
75
B
LEU
76
n
76
LEU
76
B
THR
77
n
77
THR
77
B
ASN
78
n
78
ASN
78
B
ASN
79
n
79
ASN
79
B
PRO
80
n
80
PRO
80
B
ALA
81
n
81
ALA
81
B
CYS
82
n
82
CYS
82
B
LYS
83
n
83
LYS
83
B
ASN
84
n
84
ASN
84
B
GLY
85
n
85
GLY
85
B
PHE
86
n
86
PHE
86
B
ILE
87
n
87
ILE
87
B
LEU
88
n
88
LEU
88
B
VAL
89
n
89
VAL
89
B
GLY
90
n
90
GLY
90
B
PHE
91
n
91
PHE
91
B
PRO
92
n
92
PRO
92
B
ARG
93
n
93
ARG
93
B
THR
94
n
94
THR
94
B
ILE
95
n
95
ILE
95
B
PRO
96
n
96
PRO
96
B
GLN
97
n
97
GLN
97
B
ALA
98
n
98
ALA
98
B
GLU
99
n
99
GLU
99
B
LYS
100
n
100
LYS
100
B
LEU
101
n
101
LEU
101
B
ASP
102
n
102
ASP
102
B
GLN
103
n
103
GLN
103
B
MET
104
n
104
MET
104
B
LEU
105
n
105
LEU
105
B
LYS
106
n
106
LYS
106
B
GLU
107
n
107
GLU
107
B
GLN
108
n
108
GLN
108
B
GLY
109
n
109
GLY
109
B
THR
110
n
110
THR
110
B
PRO
111
n
111
PRO
111
B
LEU
112
n
112
LEU
112
B
GLU
113
n
113
GLU
113
B
LYS
114
n
114
LYS
114
B
ALA
115
n
115
ALA
115
B
ILE
116
n
116
ILE
116
B
GLU
117
n
117
GLU
117
B
LEU
118
n
118
LEU
118
B
LYS
119
n
119
LYS
119
B
VAL
120
n
120
VAL
120
B
ASP
121
n
121
ASP
121
B
ASP
122
n
122
ASP
122
B
GLU
123
n
123
GLU
123
B
LEU
124
n
124
LEU
124
B
LEU
125
n
125
LEU
125
B
VAL
126
n
126
VAL
126
B
ALA
127
n
127
ALA
127
B
ARG
128
n
128
ARG
128
B
ILE
129
n
129
ILE
129
B
THR
130
n
130
THR
130
B
GLY
131
n
131
GLY
131
B
ARG
132
n
132
ARG
132
B
LEU
133
n
133
LEU
133
B
ILE
134
n
134
ILE
134
B
HIS
135
n
135
HIS
135
B
PRO
136
n
136
PRO
136
B
ALA
137
n
137
ALA
137
B
SER
138
n
138
SER
138
B
GLY
139
n
139
GLY
139
B
ARG
140
n
140
ARG
140
B
SER
141
n
141
SER
141
B
TYR
142
n
142
TYR
142
B
HIS
143
n
143
HIS
143
B
LYS
144
n
144
LYS
144
B
ILE
145
n
145
ILE
145
B
PHE
146
n
146
PHE
146
B
ASN
147
n
147
ASN
147
B
PRO
148
n
148
PRO
148
B
PRO
149
n
149
PRO
149
B
LYS
150
n
150
LYS
150
B
GLU
151
n
151
GLU
151
B
ASP
152
n
152
ASP
152
B
MET
153
n
153
MET
153
B
LYS
154
n
154
LYS
154
B
ASP
155
n
155
ASP
155
B
ASP
156
n
156
ASP
156
B
VAL
157
n
157
VAL
157
B
THR
158
n
158
THR
158
B
GLY
159
n
159
GLY
159
B
GLU
160
n
160
GLU
160
B
ALA
161
n
161
ALA
161
B
LEU
162
n
162
LEU
162
B
VAL
163
n
163
VAL
163
B
GLN
164
n
164
GLN
164
B
ILE
165
n
165
ILE
165
B
SER
166
n
166
SER
166
B
ASP
167
n
167
ASP
167
B
ASP
168
n
168
ASP
168
B
ASN
169
n
169
ASN
169
B
ALA
170
n
170
ALA
170
B
ASP
171
n
171
ASP
171
B
ALA
172
n
172
ALA
172
B
LEU
173
n
173
LEU
173
B
LYS
174
n
174
LYS
174
B
LYS
175
n
175
LYS
175
B
ARG
176
n
176
ARG
176
B
LEU
177
n
177
LEU
177
B
ALA
178
n
178
ALA
178
B
ALA
179
n
179
ALA
179
B
TYR
180
n
180
TYR
180
B
HIS
181
n
181
HIS
181
B
ALA
182
n
182
ALA
182
B
GLN
183
n
183
GLN
183
B
THR
184
n
184
THR
184
B
GLU
185
n
185
GLU
185
B
PRO
186
n
186
PRO
186
B
ILE
187
n
187
ILE
187
B
VAL
188
n
188
VAL
188
B
ASP
189
n
189
ASP
189
B
PHE
190
n
190
PHE
190
B
TYR
191
n
191
TYR
191
B
LYS
192
n
192
LYS
192
B
LYS
193
n
193
LYS
193
B
THR
194
n
194
THR
194
B
GLY
195
n
195
GLY
195
B
ILE
196
n
196
ILE
196
B
TRP
197
n
197
TRP
197
B
ALA
198
n
198
ALA
198
B
GLY
199
n
199
GLY
199
B
VAL
200
n
200
VAL
200
B
ASP
201
n
201
ASP
201
B
ALA
202
n
202
ALA
202
B
SER
203
n
203
SER
203
B
GLN
204
n
204
GLN
204
B
PRO
205
n
205
PRO
205
B
PRO
206
n
206
PRO
206
B
ALA
207
n
207
ALA
207
B
THR
208
n
208
THR
208
B
VAL
209
n
209
VAL
209
B
TRP
210
n
210
TRP
210
B
ALA
211
n
211
ALA
211
B
ASP
212
n
212
ASP
212
B
ILE
213
n
213
ILE
213
B
LEU
214
n
214
LEU
214
B
ASN
215
n
215
ASN
215
B
LYS
216
n
216
LYS
216
B
LEU
217
n
217
LEU
217
B
GLY
218
n
218
GLY
218
B
LYS
219
n
219
LYS
219
B
ASN
220
n
220
ASN
220
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ALA
198
A
O
ALA
198
A
N
ALA
115
A
N
ALA
115
A
O
LYS
114
A
O
LYS
114
A
N
VAL
8
A
N
VAL
8
A
O
MET
7
A
O
MET
7
A
N
PHE
86
A
N
PHE
86
A
O
ILE
87
A
O
ILE
87
A
N
ALA
31
A
N
ALA
31
A
O
LEU
133
A
O
LEU
133
A
N
TYR
142
A
N
TYR
142
B
O
ALA
198
B
O
ALA
198
B
N
ALA
115
B
N
ALA
115
B
O
LYS
114
B
O
LYS
114
B
N
VAL
8
B
N
VAL
8
B
O
ILE
5
B
O
ILE
5
B
N
PHE
86
B
N
PHE
86
B
O
ILE
87
B
O
ILE
87
B
N
ALA
31
B
N
ALA
31
B
O
LEU
133
B
O
LEU
133
B
N
TYR
142
B
N
TYR
142
1
A
CG1
ILE
165
A
CG1
ILE
165
0
Y
1
A
CG2
ILE
165
A
CG2
ILE
165
0
Y
1
A
CD1
ILE
165
A
CD1
ILE
165
0
Y
1
A
C1'
ATF
230
PLANAR
1
A
SER
2
67.67
-61.00
1
A
ASP
58
-62.02
0.42
1
A
SER
64
10.10
-114.64
1
A
ASP
65
178.80
-45.27
1
A
PHE
91
-173.64
139.25
1
A
LYS
144
-55.42
-9.51
1
A
ASN
147
-156.36
69.57
1
A
SER
166
-141.02
19.86
1
A
ASP
167
54.40
70.69
1
A
ALA
170
-36.45
-80.70
1
B
SER
2
-1.59
103.51
1
B
GLU
3
111.81
28.87
1
B
ASP
58
-74.79
36.76
1
B
ALA
137
-66.26
-79.94
1
B
ASN
147
-162.44
68.73
1
B
ASP
152
-37.16
117.02
29
RESIDUES SER 166 - ASN 169 IN CHAIN HAVE WEAK DENSITY.
0.191
0.191
2.36
10.
15793
90.
1
0.
0.28
2.36
10.
161
3593
66
0
3366
0.012
1.7
2.4
1.5
3.9
2.0
6.4
2.0
8.7
2.5
2.36
10.
1DVR
15793
0.
0.058
1
4.1
90.
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data reduction
XDS
phasing
X-PLOR
3.1
STRUCTURE OF A MUTANT ADENYLATE KINASE LIGATED WITH AN ATP-ANALOGUE SHOWING DOMAIN CLOSURE OVER ATP
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
LYS
17
A
LYS
17
HELX_P
A
PHE
28
A
PHE
28
1
1
12
A
THR
35
A
THR
35
HELX_P
A
LYS
45
A
LYS
45
1
2
11
A
GLN
48
A
GLN
48
HELX_P
A
GLN
59
A
GLN
59
1
3
12
A
ASP
66
A
ASP
66
HELX_P
A
ASN
78
A
ASN
78
1
4
13
A
PRO
80
A
PRO
80
HELX_P
A
LYS
83
A
LYS
83
5
5
4
A
ILE
95
A
ILE
95
HELX_P
A
GLN
108
A
GLN
108
1
6
14
A
ASP
122
A
ASP
122
HELX_P
A
THR
130
A
THR
130
1
7
9
A
ALA
170
A
ALA
170
HELX_P
A
LYS
193
A
LYS
193
1
8
24
A
PRO
206
A
PRO
206
HELX_P
A
LYS
216
A
LYS
216
1
9
11
B
LYS
17
B
LYS
17
HELX_P
B
PHE
28
B
PHE
28
1
10
12
B
THR
35
B
THR
35
HELX_P
B
ALA
44
B
ALA
44
1
11
10
B
GLN
48
B
GLN
48
HELX_P
B
MET
57
B
MET
57
1
12
10
B
ASP
65
B
ASP
65
HELX_P
B
ASN
78
B
ASN
78
1
13
14
B
PRO
80
B
PRO
80
HELX_P
B
ASN
84
B
ASN
84
5
14
5
B
ILE
95
B
ILE
95
HELX_P
B
GLN
108
B
GLN
108
1
15
14
B
ASP
122
B
ASP
122
HELX_P
B
GLY
131
B
GLY
131
1
16
10
B
ALA
170
B
ALA
170
HELX_P
B
LYS
193
B
LYS
193
1
17
24
B
PRO
206
B
PRO
206
HELX_P
B
LEU
217
B
LEU
217
1
18
12
TRANSFERASE (PHOSPHOTRANSFERASE)
NUCLEOSIDE MONOPHOSPHATE KINASE, MYOKINASE, TRANSFERASE (PHOSPHOTRANSFERASE)
A
PHE
91
A
PHE
91
1
A
PRO
92
A
PRO
92
-0.35
B
PHE
91
B
PHE
91
1
B
PRO
92
B
PRO
92
-0.64
given
-0.489945
-0.809503
-0.323511
-0.812717
0.289904
0.505417
-0.315349
0.510549
-0.799934
65.36820
45.29500
-12.50900
KAD1_YEAST
UNP
1
1
P07170
MSSSESIRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTN
NPACKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVT
GEALVQRSDDNADALKKRLAAYHAQTEPIVDFYKKTGIWAGVDASQPPATVWADILNKLGKD
3
221
1DVR
1
219
P07170
A
1
1
219
3
221
1DVR
1
219
P07170
B
1
1
219
1
ASP
engineered mutation
VAL
89
1DVR
A
P07170
UNP
91
89
1
ARG
engineered mutation
ILE
165
1DVR
A
P07170
UNP
167
165
2
ASP
engineered mutation
VAL
89
1DVR
B
P07170
UNP
91
89
2
ARG
engineered mutation
ILE
165
1DVR
B
P07170
UNP
167
165
5
2
5
2
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
A
TRP
197
A
TRP
197
A
ASP
201
A
ASP
201
A
LYS
114
A
LYS
114
A
LYS
119
A
LYS
119
A
ARG
6
A
ARG
6
A
GLY
11
A
GLY
11
A
PHE
86
A
PHE
86
A
VAL
89
A
VAL
89
A
ALA
31
A
ALA
31
A
ALA
34
A
ALA
34
A
ARG
132
A
ARG
132
A
HIS
135
A
HIS
135
A
ARG
140
A
ARG
140
A
HIS
143
A
HIS
143
B
TRP
197
B
TRP
197
B
ASP
201
B
ASP
201
B
LYS
114
B
LYS
114
B
LYS
119
B
LYS
119
B
ILE
5
B
ILE
5
B
GLY
11
B
GLY
11
B
GLY
85
B
GLY
85
B
VAL
89
B
VAL
89
B
ALA
31
B
ALA
31
B
ALA
34
B
ALA
34
B
ARG
132
B
ARG
132
B
ILE
134
B
ILE
134
B
SER
141
B
SER
141
B
HIS
143
B
HIS
143
BINDING SITE FOR RESIDUE ATF A 230
A
ATF
230
Software
23
BINDING SITE FOR RESIDUE ATF B 230
B
ATF
230
Software
19
A
PRO
13
A
PRO
13
23
1_555
A
GLY
14
A
GLY
14
23
1_555
A
ALA
15
A
ALA
15
23
1_555
A
GLY
16
A
GLY
16
23
1_555
A
LYS
17
A
LYS
17
23
1_555
A
GLY
18
A
GLY
18
23
1_555
A
THR
19
A
THR
19
23
1_555
A
ARG
128
A
ARG
128
23
1_555
A
ARG
132
A
ARG
132
23
1_555
A
SER
141
A
SER
141
23
1_555
A
TYR
142
A
TYR
142
23
1_555
A
HIS
143
A
HIS
143
23
1_555
A
PHE
146
A
PHE
146
23
1_555
A
ALA
202
A
ALA
202
23
1_555
A
GLN
204
A
GLN
204
23
1_555
A
PRO
206
A
PRO
206
23
1_555
A
HOH
243
E
HOH
23
1_555
A
HOH
249
E
HOH
23
1_555
A
HOH
252
E
HOH
23
1_555
A
HOH
291
E
HOH
23
1_555
B
LYS
55
B
LYS
55
23
1_555
B
GLN
59
B
GLN
59
23
1_555
B
HOH
231
F
HOH
23
1_555
A
LYS
55
A
LYS
55
19
1_555
A
GLN
59
A
GLN
59
19
1_555
B
PRO
13
B
PRO
13
19
1_555
B
GLY
14
B
GLY
14
19
1_555
B
GLY
16
B
GLY
16
19
1_555
B
LYS
17
B
LYS
17
19
1_555
B
GLY
18
B
GLY
18
19
1_555
B
THR
19
B
THR
19
19
1_555
B
ARG
128
B
ARG
128
19
1_555
B
ARG
132
B
ARG
132
19
1_555
B
SER
141
B
SER
141
19
1_555
B
TYR
142
B
TYR
142
19
1_555
B
HIS
143
B
HIS
143
19
1_555
B
PHE
146
B
PHE
146
19
1_555
B
GLN
204
B
GLN
204
19
1_555
B
PRO
205
B
PRO
205
19
1_555
B
PRO
206
B
PRO
206
19
1_555
B
HOH
261
F
HOH
19
1_555
B
HOH
289
F
HOH
19
1_555
19
P 21 21 21