1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Hasegawa, J.
Uchiyama, S.
Tanimoto, Y.
Mizutani, M.
Kobayashi, Y.
Sambongi, Y.
Igarashi, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
C
N
139
N
C
N
140
N
C
Y
141
N
C
Y
142
N
C
Y
143
N
C
Y
144
N
C
N
145
N
C
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
C
Y
158
N
C
Y
159
N
C
Y
160
N
C
Y
161
N
C
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
O
N
174
N
O
Y
175
N
N
N
176
N
N
Y
177
N
N
N
178
N
N
N
179
N
FE
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
Y
217
N
C
Y
218
N
N
Y
219
N
C
Y
220
N
C
Y
221
N
N
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
S
C
N
238
N
C
N
239
N
C
N
240
N
C
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
N
N
256
S
C
N
257
N
C
N
258
N
O
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
N
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
N
N
303
S
C
N
304
N
C
N
305
N
O
N
306
N
C
N
307
N
C
N
308
N
S
N
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
N
367
N
O
N
368
N
O
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
R
C
N
381
N
O
N
382
N
C
N
383
N
O
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
N
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
N
N
421
S
C
N
422
N
C
N
423
N
O
N
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
Y
430
N
C
N
431
N
O
N
432
N
O
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
N
N
445
S
C
N
446
N
C
N
447
N
O
N
448
N
C
N
449
N
C
N
450
N
C
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
Y
141
N
doub
Y
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
sing
Y
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
Y
173
N
sing
Y
174
N
sing
Y
175
N
doub
N
176
N
sing
Y
177
N
sing
N
178
N
sing
Y
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
Y
222
N
sing
Y
223
N
doub
Y
224
N
doub
N
225
N
sing
Y
226
N
sing
N
227
N
sing
Y
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
doub
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
Y
328
N
doub
Y
329
N
sing
Y
330
N
sing
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
Y
397
N
doub
Y
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
Y
402
N
sing
Y
403
N
sing
N
404
N
sing
Y
405
N
sing
Y
406
N
doub
N
407
N
sing
Y
408
N
doub
N
409
N
sing
Y
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
doub
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
Y
425
N
doub
Y
426
N
sing
Y
427
N
sing
N
428
N
sing
Y
429
N
doub
N
430
N
sing
Y
431
N
doub
N
432
N
sing
Y
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
doub
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
275
37824
37828
10.1074/jbc.M005861200
10918067
Selected mutations in a mesophilic cytochrome c confer the stability of a thermophilic counterpart.
2000
10.2210/pdb1dvv/pdb
pdb_00001dvv
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
8724.947
CYTOCHROME C551
F7A, V13M, F34Y, E43Y, V78I
1
man
polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
no
no
EDPEVLAKNKGCMACHAIDTKMVGPAYKDVAAKYAGQAGAEAYLAQRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWILS
QK
EDPEVLAKNKGCMACHAIDTKMVGPAYKDVAAKYAGQAGAEAYLAQRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWILS
QK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Pseudomonas
Escherichia
sample
287
Pseudomonas aeruginosa
562
Escherichia coli
PKK223-3
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
Database references
Derived calculations
1
0
2000-11-29
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-03-14
1
4
2024-04-10
_struct_ref_seq_dif.details
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-01-22
REL
REL
HEM
PROTOPORPHYRIN IX CONTAINING FE
The structure was determined using triple-resonance NMR spectroscopy.
structures with the lowest energy
100
20
2D NOESY
DQF-COSY
3D_15N-separated_NOESY
HNHA
HNHB
3D_13C,15N_simultanously_separated NOESY
5.0
1
atm
298
K
simulated annealing
1mM cytochrome c551(F7A/V13M/F34Y/E43Y/V78I) reduced with dithionite
90% H2O/10% D2O
1mM cytochrome c551(F7A/V13M/F34Y/E43Y/V78I) reduced with dithionite
100% D2O
1mM cytochrome c551(F7A/V13M/F34Y/E43Y/V78I) U-15N reduced with dithionite
90% H2O/10% D2O
1mM cytochrome c551(F7A/V13M/F34Y/E43Y/V78I) U-15N,13C reduced with dithionite
90% H2O/10% D2O
Brunger
refinement
X-PLOR
3.1
600
Varian
INOVA
HEM
83
2
HEM
HEM
83
A
GLU
1
n
1
GLU
1
A
ASP
2
n
2
ASP
2
A
PRO
3
n
3
PRO
3
A
GLU
4
n
4
GLU
4
A
VAL
5
n
5
VAL
5
A
LEU
6
n
6
LEU
6
A
ALA
7
n
7
ALA
7
A
LYS
8
n
8
LYS
8
A
ASN
9
n
9
ASN
9
A
LYS
10
n
10
LYS
10
A
GLY
11
n
11
GLY
11
A
CYS
12
n
12
CYS
12
A
MET
13
n
13
MET
13
A
ALA
14
n
14
ALA
14
A
CYS
15
n
15
CYS
15
A
HIS
16
n
16
HIS
16
A
ALA
17
n
17
ALA
17
A
ILE
18
n
18
ILE
18
A
ASP
19
n
19
ASP
19
A
THR
20
n
20
THR
20
A
LYS
21
n
21
LYS
21
A
MET
22
n
22
MET
22
A
VAL
23
n
23
VAL
23
A
GLY
24
n
24
GLY
24
A
PRO
25
n
25
PRO
25
A
ALA
26
n
26
ALA
26
A
TYR
27
n
27
TYR
27
A
LYS
28
n
28
LYS
28
A
ASP
29
n
29
ASP
29
A
VAL
30
n
30
VAL
30
A
ALA
31
n
31
ALA
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
TYR
34
n
34
TYR
34
A
ALA
35
n
35
ALA
35
A
GLY
36
n
36
GLY
36
A
GLN
37
n
37
GLN
37
A
ALA
38
n
38
ALA
38
A
GLY
39
n
39
GLY
39
A
ALA
40
n
40
ALA
40
A
GLU
41
n
41
GLU
41
A
ALA
42
n
42
ALA
42
A
TYR
43
n
43
TYR
43
A
LEU
44
n
44
LEU
44
A
ALA
45
n
45
ALA
45
A
GLN
46
n
46
GLN
46
A
ARG
47
n
47
ARG
47
A
ILE
48
n
48
ILE
48
A
LYS
49
n
49
LYS
49
A
ASN
50
n
50
ASN
50
A
GLY
51
n
51
GLY
51
A
SER
52
n
52
SER
52
A
GLN
53
n
53
GLN
53
A
GLY
54
n
54
GLY
54
A
VAL
55
n
55
VAL
55
A
TRP
56
n
56
TRP
56
A
GLY
57
n
57
GLY
57
A
PRO
58
n
58
PRO
58
A
ILE
59
n
59
ILE
59
A
PRO
60
n
60
PRO
60
A
MET
61
n
61
MET
61
A
PRO
62
n
62
PRO
62
A
PRO
63
n
63
PRO
63
A
ASN
64
n
64
ASN
64
A
ALA
65
n
65
ALA
65
A
VAL
66
n
66
VAL
66
A
SER
67
n
67
SER
67
A
ASP
68
n
68
ASP
68
A
ASP
69
n
69
ASP
69
A
GLU
70
n
70
GLU
70
A
ALA
71
n
71
ALA
71
A
GLN
72
n
72
GLN
72
A
THR
73
n
73
THR
73
A
LEU
74
n
74
LEU
74
A
ALA
75
n
75
ALA
75
A
LYS
76
n
76
LYS
76
A
TRP
77
n
77
TRP
77
A
ILE
78
n
78
ILE
78
A
LEU
79
n
79
LEU
79
A
SER
80
n
80
SER
80
A
GLN
81
n
81
GLN
81
A
LYS
82
n
82
LYS
82
A
author_defined_assembly
1
monomeric
A
HIS
16
A
NE2
HIS
16
1_555
A
HEM
83
B
FE
HEM
1_555
A
HEM
83
B
NA
HEM
1_555
72.9
A
HIS
16
A
NE2
HIS
16
1_555
A
HEM
83
B
FE
HEM
1_555
A
HEM
83
B
NB
HEM
1_555
101.7
A
HEM
83
B
NA
HEM
1_555
A
HEM
83
B
FE
HEM
1_555
A
HEM
83
B
NB
HEM
1_555
89.0
A
HIS
16
A
NE2
HIS
16
1_555
A
HEM
83
B
FE
HEM
1_555
A
HEM
83
B
NC
HEM
1_555
110.0
A
HEM
83
B
NA
HEM
1_555
A
HEM
83
B
FE
HEM
1_555
A
HEM
83
B
NC
HEM
1_555
177.1
A
HEM
83
B
NB
HEM
1_555
A
HEM
83
B
FE
HEM
1_555
A
HEM
83
B
NC
HEM
1_555
90.8
A
HIS
16
A
NE2
HIS
16
1_555
A
HEM
83
B
FE
HEM
1_555
A
HEM
83
B
ND
HEM
1_555
77.5
A
HEM
83
B
NA
HEM
1_555
A
HEM
83
B
FE
HEM
1_555
A
HEM
83
B
ND
HEM
1_555
90.8
A
HEM
83
B
NB
HEM
1_555
A
HEM
83
B
FE
HEM
1_555
A
HEM
83
B
ND
HEM
1_555
179.2
A
HEM
83
B
NC
HEM
1_555
A
HEM
83
B
FE
HEM
1_555
A
HEM
83
B
ND
HEM
1_555
89.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
SG
CAB
CYS
HEM
12
83
1.81
1
A
A
SG
CAC
CYS
HEM
15
83
1.82
2
A
A
SG
CAB
CYS
HEM
12
83
1.81
2
A
A
SG
CAC
CYS
HEM
15
83
1.82
3
A
A
SG
CAB
CYS
HEM
12
83
1.81
3
A
A
SG
CAC
CYS
HEM
15
83
1.82
4
A
A
SG
CAB
CYS
HEM
12
83
1.81
4
A
A
SG
CAC
CYS
HEM
15
83
1.82
5
A
A
SG
CAB
CYS
HEM
12
83
1.81
5
A
A
SG
CAC
CYS
HEM
15
83
1.82
6
A
A
SG
CAB
CYS
HEM
12
83
1.81
6
A
A
SG
CAC
CYS
HEM
15
83
1.82
7
A
A
SG
CAB
CYS
HEM
12
83
1.81
7
A
A
SG
CAC
CYS
HEM
15
83
1.82
8
A
A
SG
CAB
CYS
HEM
12
83
1.81
8
A
A
SG
CAC
CYS
HEM
15
83
1.82
9
A
A
SG
CAB
CYS
HEM
12
83
1.81
9
A
A
SG
CAC
CYS
HEM
15
83
1.82
10
A
A
SG
CAB
CYS
HEM
12
83
1.81
10
A
A
SG
CAC
CYS
HEM
15
83
1.82
11
A
A
SG
CAB
CYS
HEM
12
83
1.81
11
A
A
SG
CAC
CYS
HEM
15
83
1.82
12
A
A
SG
CAB
CYS
HEM
12
83
1.81
12
A
A
SG
CAC
CYS
HEM
15
83
1.82
13
A
A
SG
CAB
CYS
HEM
12
83
1.81
13
A
A
SG
CAC
CYS
HEM
15
83
1.82
14
A
A
SG
CAB
CYS
HEM
12
83
1.81
14
A
A
SG
CAC
CYS
HEM
15
83
1.82
15
A
A
SG
CAB
CYS
HEM
12
83
1.81
15
A
A
SG
CAC
CYS
HEM
15
83
1.82
16
A
A
SG
CAB
CYS
HEM
12
83
1.81
16
A
A
SG
CAC
CYS
HEM
15
83
1.82
17
A
A
SG
CAB
CYS
HEM
12
83
1.81
17
A
A
SG
CAC
CYS
HEM
15
83
1.82
18
A
A
SG
CAB
CYS
HEM
12
83
1.81
18
A
A
SG
CAC
CYS
HEM
15
83
1.82
19
A
A
SG
CAB
CYS
HEM
12
83
1.81
19
A
A
SG
CAC
CYS
HEM
15
83
1.82
20
A
A
SG
CAB
CYS
HEM
12
83
1.81
20
A
A
SG
CAC
CYS
HEM
15
83
1.82
1
A
ASP
2
-48.68
159.97
1
A
ILE
18
-37.79
-27.75
1
A
ASP
19
-155.24
-32.78
1
A
MET
22
-123.02
-117.79
1
A
ALA
26
-42.28
156.17
1
A
SER
52
163.87
167.98
1
A
GLN
53
-101.90
-161.14
1
A
VAL
55
-104.54
-62.92
1
A
PRO
58
-68.94
6.83
1
A
ALA
65
-89.26
35.72
1
A
SER
67
-46.39
172.82
1
A
GLN
81
-50.51
179.04
2
A
ILE
18
-38.66
-27.31
2
A
ASP
19
-148.65
-35.90
2
A
THR
20
-69.05
-179.29
2
A
MET
22
-78.82
-100.89
2
A
ALA
26
-46.11
151.24
2
A
ALA
35
-51.27
90.13
2
A
ALA
38
-90.02
39.46
2
A
SER
52
164.02
168.13
2
A
VAL
55
-98.28
-69.13
2
A
ALA
65
-90.50
36.37
2
A
SER
67
-42.22
152.84
2
A
GLN
81
37.83
-155.47
3
A
ASP
19
-152.21
-35.68
3
A
MET
22
-85.49
-95.22
3
A
ALA
35
-54.86
88.96
3
A
GLN
37
-42.24
157.63
3
A
PRO
58
-69.44
6.87
3
A
ALA
65
-91.66
30.32
3
A
SER
67
-48.85
179.69
4
A
ILE
18
-37.45
-27.96
4
A
ASP
19
-155.68
-34.46
4
A
MET
22
-124.73
-98.03
4
A
ALA
26
-42.43
150.97
4
A
ALA
38
-89.42
41.12
4
A
SER
52
167.42
158.72
4
A
GLN
53
-106.15
-164.82
4
A
VAL
55
-94.72
-69.25
4
A
SER
67
-43.61
157.22
5
A
ASP
19
-162.22
19.35
5
A
THR
20
-114.93
-166.40
5
A
MET
22
-97.89
-98.43
5
A
ALA
26
-41.42
163.23
5
A
ALA
35
-62.21
89.77
5
A
ALA
38
-90.15
40.29
5
A
SER
52
166.28
167.07
5
A
VAL
55
-91.58
-67.60
5
A
ALA
65
-89.87
30.68
5
A
SER
67
-50.99
-176.07
5
A
GLN
81
-53.27
94.10
6
A
ILE
18
-39.98
-25.21
6
A
ASP
19
-147.52
-39.59
6
A
MET
22
-97.13
-121.58
6
A
ALA
26
-47.01
153.00
6
A
SER
52
168.88
166.27
6
A
PRO
58
-69.72
5.06
6
A
ALA
65
-90.46
38.31
6
A
SER
67
-51.62
178.16
7
A
ILE
18
-38.72
-26.65
7
A
ASP
19
-152.19
-37.43
7
A
MET
22
-85.05
-88.23
7
A
ALA
26
-44.90
163.59
7
A
ALA
35
-57.34
95.54
7
A
SER
52
177.51
161.40
7
A
VAL
55
-97.96
-60.64
7
A
ILE
59
-109.61
78.54
7
A
ALA
65
-96.11
35.50
7
A
SER
67
-43.16
163.74
8
A
ILE
18
-37.78
-33.18
8
A
ASP
19
-156.58
8.36
8
A
MET
22
-118.26
-106.55
8
A
ALA
26
-42.80
150.02
8
A
ALA
38
-89.79
49.15
8
A
SER
52
167.70
167.85
8
A
VAL
55
-95.17
-71.23
8
A
ALA
65
-89.49
34.10
8
A
SER
67
-50.52
-177.74
8
A
GLN
81
-50.60
92.46
9
A
THR
20
-72.11
-169.61
9
A
LYS
21
-150.51
87.46
9
A
MET
22
-79.88
-101.57
9
A
ALA
26
-43.58
162.86
9
A
ALA
35
-43.15
109.43
9
A
ALA
38
-90.39
47.60
9
A
SER
52
174.52
164.33
9
A
VAL
55
-102.81
-70.75
9
A
ILE
59
-107.71
77.45
9
A
ALA
65
-95.83
34.95
9
A
SER
67
-50.84
-176.32
10
A
ILE
18
-90.44
-75.73
10
A
MET
22
-117.65
-119.52
10
A
ALA
26
-43.21
154.17
10
A
VAL
55
-93.13
-71.14
10
A
PRO
58
-68.91
8.09
10
A
ALA
65
-90.13
32.80
10
A
SER
67
-47.74
174.83
11
A
ASP
19
-157.77
-27.00
11
A
THR
20
-68.86
-173.84
11
A
MET
22
-107.88
-132.19
11
A
ALA
26
-44.97
170.28
11
A
ALA
38
-86.20
46.05
11
A
SER
52
162.11
166.68
11
A
GLN
53
-100.16
-165.26
11
A
VAL
55
-95.50
-67.73
11
A
PRO
58
-69.46
8.25
11
A
ALA
65
-93.67
36.14
12
A
ILE
18
-36.78
-29.03
12
A
ASP
19
-153.45
-32.33
12
A
MET
22
-125.22
-108.08
12
A
ALA
35
-55.70
101.70
12
A
ALA
38
-90.07
41.57
12
A
VAL
55
-99.16
-74.01
12
A
SER
67
-49.68
-178.66
12
A
GLN
81
-57.61
-167.89
13
A
ILE
18
-90.80
-73.78
13
A
THR
20
-77.40
-161.10
13
A
MET
22
-121.58
-113.90
13
A
ALA
26
-42.60
157.50
13
A
ALA
38
-88.02
42.12
13
A
SER
52
172.62
163.50
13
A
VAL
55
-103.91
-67.09
13
A
PRO
58
-69.72
5.06
13
A
ALA
65
-96.80
36.94
13
A
GLN
81
-40.62
96.14
14
A
ILE
18
-37.36
-29.49
14
A
ASP
19
-151.75
-36.13
14
A
MET
22
-127.27
-88.75
14
A
ALA
26
-38.91
149.41
14
A
ALA
35
-44.00
103.66
14
A
SER
52
169.14
167.89
14
A
VAL
55
-99.38
-68.34
14
A
PRO
58
-69.32
9.73
14
A
ALA
65
-90.66
34.90
14
A
SER
67
-47.06
173.31
15
A
ILE
18
-37.16
-35.42
15
A
ASP
19
-151.78
9.24
15
A
THR
20
-112.69
-160.54
15
A
MET
22
-140.83
-99.57
15
A
ALA
26
-42.60
152.63
15
A
ALA
35
-57.69
109.04
15
A
ALA
38
-88.85
39.45
15
A
VAL
55
-96.88
-70.23
15
A
SER
67
-46.80
174.27
16
A
ILE
18
-90.36
-62.49
16
A
MET
22
-97.22
-132.18
16
A
ALA
26
-46.02
153.72
16
A
SER
52
172.60
170.42
16
A
VAL
55
-105.89
-65.60
16
A
PRO
58
-69.74
6.72
16
A
ALA
65
-100.53
48.86
16
A
GLN
81
-45.07
93.76
17
A
ILE
18
-38.65
-28.84
17
A
ASP
19
-149.95
-32.10
17
A
THR
20
-68.90
-161.79
17
A
MET
22
-131.90
-100.54
17
A
ALA
35
-54.09
106.98
17
A
ALA
38
-84.59
42.85
17
A
SER
52
167.10
166.79
17
A
VAL
55
-96.87
-68.47
17
A
PRO
58
-69.73
8.04
17
A
ALA
65
-86.90
43.66
17
A
SER
67
-53.36
-171.02
17
A
GLN
81
-33.66
129.93
18
A
ILE
18
-36.20
-29.78
18
A
ASP
19
-161.04
18.04
18
A
MET
22
-95.16
-112.93
18
A
ALA
38
-84.82
46.73
18
A
SER
52
167.21
171.72
18
A
PRO
58
-69.70
7.47
18
A
ILE
59
-108.11
78.04
18
A
ALA
65
-89.41
35.18
18
A
SER
67
-42.41
153.76
19
A
ASP
2
-49.69
169.48
19
A
ILE
18
-39.73
-26.41
19
A
ASP
19
-150.62
-35.34
19
A
THR
20
-69.06
-164.77
19
A
MET
22
-86.55
-91.63
19
A
ALA
26
-43.07
151.65
19
A
ALA
35
-57.55
109.94
19
A
SER
52
171.72
167.91
19
A
VAL
55
-98.53
-68.21
19
A
SER
67
-43.45
159.81
19
A
GLN
81
-49.94
-177.57
20
A
ILE
18
-90.27
-73.49
20
A
MET
22
-88.54
-125.34
20
A
ALA
26
-42.81
154.75
20
A
ALA
38
-90.13
51.31
20
A
SER
52
166.47
165.03
20
A
VAL
55
-91.95
-64.44
20
A
ALA
65
-95.45
32.64
20
A
SER
67
-47.40
175.60
SOLUTION STRUCTURE OF THE QUINTUPLE MUTANT OF CYTOCHROME C-551 FROM PSEUDOMONAS AERUGINOSA
1
N
N
2
N
N
A
ASP
2
A
ASP
2
HELX_P
A
LYS
10
A
LYS
10
1
1
9
A
GLY
11
A
GLY
11
HELX_P
A
HIS
16
A
HIS
16
1
2
6
A
ALA
26
A
ALA
26
HELX_P
A
ALA
35
A
ALA
35
1
3
10
A
GLY
39
A
GLY
39
HELX_P
A
LYS
49
A
LYS
49
1
4
11
A
SER
67
A
SER
67
HELX_P
A
GLN
81
A
GLN
81
1
5
15
metalc
2.512
A
HIS
16
A
NE2
HIS
16
1_555
A
HEM
83
B
FE
HEM
1_555
ELECTRON TRANSPORT
cytochrome c, stability, ELECTRON TRANSPORT
CY551_PSEAE
UNP
1
P00099
23
104
1DVV
1
82
P00099
A
1
1
82
1
PHE
engineered mutation
ALA
7
1DVV
A
P00099
UNP
29
7
1
VAL
engineered mutation
MET
13
1DVV
A
P00099
UNP
35
13
1
PHE
engineered mutation
TYR
34
1DVV
A
P00099
UNP
56
34
1
GLU
engineered mutation
TYR
43
1DVV
A
P00099
UNP
65
43
1
VAL
engineered mutation
ILE
78
1DVV
A
P00099
UNP
100
78
BINDING SITE FOR RESIDUE HEM A 83
A
HEM
83
Software
22
A
LYS
10
A
LYS
10
22
1_555
A
GLY
11
A
GLY
11
22
1_555
A
CYS
12
A
CYS
12
22
1_555
A
CYS
15
A
CYS
15
22
1_555
A
HIS
16
A
HIS
16
22
1_555
A
VAL
23
A
VAL
23
22
1_555
A
PRO
25
A
PRO
25
22
1_555
A
LEU
44
A
LEU
44
22
1_555
A
ARG
47
A
ARG
47
22
1_555
A
ILE
48
A
ILE
48
22
1_555
A
SER
52
A
SER
52
22
1_555
A
GLN
53
A
GLN
53
22
1_555
A
VAL
55
A
VAL
55
22
1_555
A
TRP
56
A
TRP
56
22
1_555
A
GLY
57
A
GLY
57
22
1_555
A
ILE
59
A
ILE
59
22
1_555
A
PRO
60
A
PRO
60
22
1_555
A
MET
61
A
MET
61
22
1_555
A
PRO
62
A
PRO
62
22
1_555
A
ASN
64
A
ASN
64
22
1_555
A
LEU
74
A
LEU
74
22
1_555
A
ILE
78
A
ILE
78
22
1_555
1
P 1