1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Atkinson, R.A.
Kieffer, B.
Dejaegere, A.
Sirockin, F.
Lefevre, J.-F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
39
3908
3919
10.1021/bi992651h
10747778
Structural and dynamic characterization of omega-conotoxin MVIIA: the binding loop exhibits slow conformational exchange.
2000
10.2210/pdb1dw5/pdb
pdb_00001dw5
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
2650.224
OMEGA-CONOTOXIN MVIIA
1
syn
polymer
no
yes
CKGKGAKCSRLMYDCCTGSCRSGKC(NH2)
CKGKGAKCSRLMYDCCTGSCRSGKCX
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2000-03-01
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-01-24
REL
REL
THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE OF THIS PEPTIDE NATURALLY OCCURS IN CONUS MAGUS (MAGUS CONE)
sample
TEMPERATURE DEPENDENCE OF CHEMICAL SHIFTS, NH EXCHANGE INTO D2O, RELAXATION MEASUREMENTS AT 500 AND 600 MHZ
structures with the lowest energy
500
25
2D NOESY
2D COSY
2D HOHAHA
2D 13C-1H HSQC
0
3.50
AMBIENT
283.00
K
SUBSTRUCTURE EMBEDDING BY DISTANCE GEOMETRY, SIMULATED ANNEALING REGULARISATION OF FULL STRUCTURE, SIMULATED ANNEALING REFINEMENT
simulated annealing
1
1
structure solution
XwinNMR
1.2
structure solution
Felix
2.10
structure solution
X-PLOR
3.1
refinement
X-PLOR
3.1
500
Bruker
AMX
600
Bruker
DRX
CYS
1
n
1
CYS
1
A
LYS
2
n
2
LYS
2
A
GLY
3
n
3
GLY
3
A
LYS
4
n
4
LYS
4
A
GLY
5
n
5
GLY
5
A
ALA
6
n
6
ALA
6
A
LYS
7
n
7
LYS
7
A
CYS
8
n
8
CYS
8
A
SER
9
n
9
SER
9
A
ARG
10
n
10
ARG
10
A
LEU
11
n
11
LEU
11
A
MET
12
n
12
MET
12
A
TYR
13
n
13
TYR
13
A
ASP
14
n
14
ASP
14
A
CYS
15
n
15
CYS
15
A
CYS
16
n
16
CYS
16
A
THR
17
n
17
THR
17
A
GLY
18
n
18
GLY
18
A
SER
19
n
19
SER
19
A
CYS
20
n
20
CYS
20
A
ARG
21
n
21
ARG
21
A
SER
22
n
22
SER
22
A
GLY
23
n
23
GLY
23
A
LYS
24
n
24
LYS
24
A
CYS
25
n
25
CYS
25
A
CYS
25
n
26
NH2
26
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
O
H
LYS
CYS
2
16
1.55
2
A
A
O
H
LEU
TYR
11
13
1.56
2
A
A
O
H
LYS
CYS
2
16
1.56
2
A
A
H
O
ARG
LYS
21
24
1.58
3
A
A
H
O
ARG
LYS
21
24
1.56
4
A
A
O
H
LYS
CYS
2
16
1.55
4
A
A
H
O
ARG
LYS
21
24
1.55
5
A
A
H
O
ARG
LYS
21
24
1.51
5
A
A
O
H
LYS
CYS
2
16
1.52
6
A
A
H
O
ARG
LYS
21
24
1.48
6
A
A
O
H
LYS
CYS
2
16
1.58
7
A
A
H
O
ARG
LYS
21
24
1.46
7
A
A
O
H
LYS
CYS
2
16
1.49
8
A
A
O
H
LYS
CYS
2
16
1.55
9
A
A
H
O
ARG
LYS
21
24
1.55
9
A
A
O
H
LYS
CYS
2
16
1.56
11
A
A
O
H
LYS
CYS
2
16
1.52
12
A
A
O
H
LYS
CYS
2
16
1.55
13
A
A
HZ1
OG1
LYS
THR
4
17
1.51
14
A
A
O
H
LYS
CYS
2
16
1.52
15
A
A
H
O
LYS
ASP
2
14
1.55
15
A
A
H
O
ARG
LYS
21
24
1.56
15
A
A
O
H
LYS
CYS
2
16
1.58
16
A
A
H
O
ARG
LYS
21
24
1.50
16
A
A
O
H
LYS
CYS
2
16
1.59
18
A
A
H
O
ARG
LYS
21
24
1.47
18
A
A
O
H
LYS
CYS
2
16
1.53
19
A
A
H
O
ARG
LYS
21
24
1.51
21
A
A
H
O
ARG
LYS
21
24
1.46
21
A
A
O
H
LYS
CYS
2
16
1.54
23
A
A
H
O
ARG
LYS
21
24
1.46
23
A
A
O
H
LYS
CYS
2
16
1.56
24
A
A
O
H
LYS
CYS
2
16
1.53
24
A
A
O
H
ARG
LYS
21
24
1.59
1
A
LYS
4
-43.56
159.81
1
A
LYS
7
56.33
154.98
1
A
CYS
8
178.37
-147.33
1
A
SER
9
-137.28
-142.52
1
A
LEU
11
83.96
77.28
1
A
TYR
13
70.69
52.51
1
A
THR
17
-154.34
75.55
1
A
SER
19
-127.37
-164.55
2
A
LYS
4
-49.46
157.88
2
A
LYS
7
55.41
156.17
2
A
CYS
8
177.47
-165.57
2
A
SER
9
-101.53
-145.14
2
A
LEU
11
-133.08
-105.91
2
A
MET
12
67.41
-58.16
2
A
TYR
13
71.02
45.49
2
A
SER
19
-137.09
-158.96
2
A
SER
22
59.84
13.49
3
A
LYS
7
55.79
155.32
3
A
CYS
8
178.84
-175.17
3
A
SER
9
-98.68
-142.01
3
A
ARG
10
-92.34
-62.45
4
A
LYS
7
-22.51
145.09
4
A
SER
9
-93.92
-122.87
4
A
TYR
13
70.29
38.13
4
A
THR
17
-99.42
-144.57
4
A
SER
22
47.43
24.64
5
A
LYS
2
-113.21
-167.11
5
A
ALA
6
-69.42
73.89
5
A
LYS
7
-31.59
150.30
5
A
SER
9
-94.99
-125.75
5
A
TYR
13
53.28
80.57
5
A
ASP
14
-136.35
-38.25
5
A
SER
22
48.19
22.62
6
A
LYS
4
-45.30
156.53
6
A
LYS
7
56.41
151.33
6
A
CYS
8
177.73
-151.06
6
A
SER
9
-115.27
-123.48
6
A
LEU
11
-150.58
70.33
6
A
SER
22
47.72
23.55
7
A
ALA
6
-80.00
26.68
7
A
LYS
7
55.43
155.55
7
A
CYS
8
-179.20
-158.67
7
A
SER
9
-106.96
-102.37
7
A
ARG
10
-140.23
-44.36
7
A
LEU
11
-140.22
39.01
7
A
TYR
13
60.85
73.14
7
A
THR
17
-153.18
72.04
8
A
LYS
2
-107.48
-166.75
8
A
LYS
7
-28.44
149.14
8
A
SER
9
-94.07
-101.20
8
A
ARG
10
-167.48
115.65
8
A
CYS
20
-57.65
92.20
9
A
LYS
2
-122.52
-167.65
9
A
LYS
7
-33.09
155.61
9
A
CYS
8
-142.48
-145.76
9
A
ARG
10
82.95
-13.62
9
A
LEU
11
-161.06
22.89
9
A
TYR
13
61.95
66.95
9
A
SER
22
49.26
27.32
10
A
ALA
6
-79.59
21.86
10
A
LYS
7
34.72
43.10
10
A
CYS
8
-68.52
-148.95
10
A
SER
9
-106.53
-140.45
10
A
THR
17
-153.66
31.80
10
A
CYS
20
-43.01
97.71
10
A
SER
22
47.47
24.65
11
A
ALA
6
-69.86
75.17
11
A
LYS
7
-28.26
149.08
11
A
CYS
8
-152.11
-156.96
11
A
SER
9
-93.42
-110.86
11
A
ARG
10
-135.35
-45.70
11
A
CYS
20
-50.50
99.62
12
A
LYS
7
-30.71
150.19
12
A
SER
9
-94.31
-102.63
12
A
THR
17
-90.73
-128.84
12
A
CYS
20
-45.39
103.77
13
A
ALA
6
-78.62
21.87
13
A
LYS
7
30.79
44.65
13
A
CYS
8
-70.63
-153.64
13
A
SER
9
-103.26
-140.93
13
A
LEU
11
80.20
53.05
14
A
LYS
4
-41.37
150.47
14
A
ALA
6
-69.11
75.89
14
A
LYS
7
-28.93
150.09
14
A
SER
9
-98.84
-143.72
14
A
LEU
11
-153.84
44.07
15
A
LYS
7
56.88
154.17
15
A
CYS
8
175.14
173.95
15
A
SER
19
-125.07
-167.79
16
A
LYS
7
55.56
157.04
16
A
CYS
8
179.23
-174.06
16
A
SER
9
-94.48
-118.52
16
A
ARG
10
-119.86
-76.65
16
A
THR
17
-146.21
-106.65
16
A
SER
22
55.81
16.35
17
A
LYS
4
-48.84
152.77
17
A
LYS
7
55.77
157.90
17
A
CYS
8
-179.48
-157.64
17
A
SER
9
-116.85
-89.27
17
A
ARG
10
-141.41
-118.72
17
A
THR
17
-153.96
54.50
18
A
ALA
6
-79.90
25.96
18
A
LYS
7
54.62
157.59
18
A
CYS
8
-179.90
-157.47
18
A
SER
9
-116.78
-82.79
18
A
ARG
10
-156.96
-66.65
18
A
THR
17
-106.07
-122.23
19
A
ALA
6
-79.16
37.74
19
A
LYS
7
50.57
167.94
19
A
CYS
8
179.17
-175.54
19
A
SER
9
-105.26
-103.74
19
A
ARG
10
-128.26
-106.99
19
A
TYR
13
77.56
40.91
19
A
THR
17
-150.55
37.49
20
A
LYS
7
54.72
154.46
20
A
CYS
8
-178.71
-158.19
20
A
SER
9
-98.00
-131.81
20
A
LEU
11
-174.44
35.12
20
A
THR
17
-143.27
-22.03
21
A
LYS
4
-43.65
152.05
21
A
LYS
7
-33.47
153.97
21
A
SER
9
-93.02
-83.70
21
A
ARG
10
-175.18
105.82
21
A
LEU
11
70.06
44.33
21
A
SER
22
59.89
12.89
22
A
LYS
2
-116.36
-167.49
22
A
LYS
7
-29.57
152.47
22
A
CYS
8
-156.95
-156.18
22
A
SER
9
-93.73
-137.29
22
A
LEU
11
63.64
65.96
22
A
CYS
20
-45.75
103.21
23
A
LYS
4
-41.88
150.82
23
A
LYS
7
-31.38
152.48
23
A
SER
9
-93.62
-88.97
23
A
ARG
10
-148.52
-74.74
24
A
LYS
7
-31.76
151.09
24
A
SER
19
-140.38
-157.67
25
A
ALA
6
-79.67
36.69
25
A
LYS
7
51.67
161.19
25
A
CYS
8
179.05
-167.00
25
A
LEU
11
-153.18
22.37
25
A
THR
17
-154.56
89.89
NMR STRUCTURE OF OMEGA-CONOTOXIN MVIIA: NO CONSTRAINTS ON DISULPHIDE BRIDGES
1
N
N
disulf
2.022
A
CYS
1
A
SG
CYS
1
1_555
A
CYS
16
A
SG
CYS
16
1_555
disulf
2.022
A
CYS
8
A
SG
CYS
8
1_555
A
CYS
20
A
SG
CYS
20
1_555
disulf
2.020
A
CYS
15
A
SG
CYS
15
1_555
A
CYS
25
A
SG
CYS
25
1_555
covale
1.304
both
A
CYS
25
A
C
CYS
25
1_555
A
NH2
26
A
N
NH2
26
1_555
TOXIN
CONOTOXIN, CALCIUM CHANNEL, CONFORMATIONAL EXCHANGE, TOXIN
CXO7A_CONMA
UNP
1
P05484
1
25
1DW5
1
25
P05484
A
1
1
25
BINDING SITE FOR RESIDUE NH2 A 26
A
NH2
26
Software
2
A
SER
19
A
SER
19
2
1_555
A
CYS
25
A
CYS
25
2
1_555
1
P 1