1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Lopez-Garcia, F.
Zahn, R.
Riek, R.
Billeter, M.
Wuthrich, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
97
8334
10.1073/PNAS.97.15.8334
10899999
NMR Structure of the Bovine Prion Protein
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
13111.546
PRION PROTEIN
RESIDUES 121-230
YES
1
man
polymer
PRP, MAJOR PRION PROTEIN
no
no
GSVVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNITVKEHTVTTTTKGENF
TETDIKMMERVVEQMCITQYQRESQAYYQRGA
GSVVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNITVKEHTVTTTTKGENF
TETDIKMMERVVEQMCITQYQRESQAYYQRGA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
BOVINE
sample
EXTRACELLULAR
PRNP
9913
BRAIN
BOS TAURUS
CYTOPLASM
469008
ESCHERICHIA COLI
BL21(DE3)
PRSET A
repository
Initial release
Version format compliance
Version format compliance
1
0
2000-07-20
1
1
2011-05-07
1
2
2011-07-13
BOVINE PRION PROTEIN FRAGMENT 121-230 NMR, 20 STRUCTURES MINIMIZED STRUCTURE
BOVINE PRION PROTEIN NMR, REPRESENTATIVE MINIMIZED STRUCTURE
BOVINE PRION PROTEIN NMR, 20 STRUCTURES
PRION PROTEIN DOMAIN PRP(121-231) FROM MOUSE, NMR, MINIMIZED AVERAGE STRUCTURE
SOLUTION NMR STRUCTURE OF RECOMBINANT SYRIAN HAMSTER PRION PROTEIN RPRP(90-231), 25 STRUCTURES
HUMAN PRION PROTEIN RESIDUES 23-230 NMR, REPRESENTATIVE STRUCTURE
HUMAN PRION PROTEIN FRAGMENT 90-230 NMR, REPRESENTATIVE STRUCTURE
HUMAN PRION PROTEIN FRAGMENT 90-230 NMR, 20 STRUCTURES
HUMAN PRION PROTEIN FRAGMENT 121-230 NMR, REPRESENTATIVE STRUCTURE
HUMAN PRION PROTEIN FRAGMENT 121-230 NMR, 20 STRUCTURES
PDBE
Y
PDBE
1999-12-15
REL
THE PDB ENTRIES 1DWY, 1DWZ, 1DX0 AND 1DX1 FORM
A SET OF STRUCTURE DETERMINATIONS AS:
1DWY THE MINIMIZED CONFORMER CLOSEST TO THE MEAN
OF THE FRAGMENT BPRP(121-230) (ONLY SUBMITTED
RESIDUES 124-227)
1DWZ 20 MINIMIZED CONFORMERS OF THE FRAGMENT BPRP(121-230)
(ONLY SUBMITTED RESIDUES 124-227)
1DX0 THE MINIMIZED CONFORMER CLOSEST TO THE MEAN OF
THE FULL LENGTH BPRP(23-230) (ONLY SUBMITTED RESIDUES
124-227)
1DX1 20 MINIMIZED CONFORMERS OF THE FULL LENGTH BPRP(23-230)
(ONLY SUBMITTED RESIDUES 124-227)
THE SEQUENCE NUMBERING GIVEN IN THESE ENTRIES IS THAT
FOR HUMAN PRION PROTEIN (RATHER THAN SEQUENTIAL) BASED
ON SEQUENCE ALIGNMENT.
RESIDUES (GLY SER) INSERTED AT THE N-TERMINUS
GLY A 119 CLONING ARTIFACT
SER A 120 CLONING ARTIFACT
CLOSEST TO THE MEAN (BACKBONE HEAVY ATOMS OF RESIDUES 125-227). THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELED PROTEIN
LEAST RESTRAINT VIOLATION
50
1
NOESY
COSY
0.01
4.5
pH
1
atm
293
K
torsion angle dynamics
90% WATER/10% D2O
KORADI, BILLETER,GUNTERT
refinement
OPALP
structure solution
DYANA
750
Bruker
DRX
n
1
119
A
n
2
120
A
n
3
121
A
n
4
122
A
n
5
123
A
GLY
124
n
6
GLY
124
A
LEU
125
n
7
LEU
125
A
GLY
126
n
8
GLY
126
A
GLY
127
n
9
GLY
127
A
TYR
128
n
10
TYR
128
A
MET
129
n
11
MET
129
A
LEU
130
n
12
LEU
130
A
GLY
131
n
13
GLY
131
A
SER
132
n
14
SER
132
A
ALA
133
n
15
ALA
133
A
MET
134
n
16
MET
134
A
SER
135
n
17
SER
135
A
ARG
136
n
18
ARG
136
A
PRO
137
n
19
PRO
137
A
LEU
138
n
20
LEU
138
A
ILE
139
n
21
ILE
139
A
HIS
140
n
22
HIS
140
A
PHE
141
n
23
PHE
141
A
GLY
142
n
24
GLY
142
A
SER
143
n
25
SER
143
A
ASP
144
n
26
ASP
144
A
TYR
145
n
27
TYR
145
A
GLU
146
n
28
GLU
146
A
ASP
147
n
29
ASP
147
A
ARG
148
n
30
ARG
148
A
TYR
149
n
31
TYR
149
A
TYR
150
n
32
TYR
150
A
ARG
151
n
33
ARG
151
A
GLU
152
n
34
GLU
152
A
ASN
153
n
35
ASN
153
A
MET
154
n
36
MET
154
A
HIS
155
n
37
HIS
155
A
ARG
156
n
38
ARG
156
A
TYR
157
n
39
TYR
157
A
PRO
158
n
40
PRO
158
A
ASN
159
n
41
ASN
159
A
GLN
160
n
42
GLN
160
A
VAL
161
n
43
VAL
161
A
TYR
162
n
44
TYR
162
A
TYR
163
n
45
TYR
163
A
ARG
164
n
46
ARG
164
A
PRO
165
n
47
PRO
165
A
VAL
166
n
48
VAL
166
A
ASP
167
n
49
ASP
167
A
GLN
168
n
50
GLN
168
A
TYR
169
n
51
TYR
169
A
SER
170
n
52
SER
170
A
ASN
171
n
53
ASN
171
A
GLN
172
n
54
GLN
172
A
ASN
173
n
55
ASN
173
A
ASN
174
n
56
ASN
174
A
PHE
175
n
57
PHE
175
A
VAL
176
n
58
VAL
176
A
HIS
177
n
59
HIS
177
A
ASP
178
n
60
ASP
178
A
CYS
179
n
61
CYS
179
A
VAL
180
n
62
VAL
180
A
ASN
181
n
63
ASN
181
A
ILE
182
n
64
ILE
182
A
THR
183
n
65
THR
183
A
VAL
184
n
66
VAL
184
A
LYS
185
n
67
LYS
185
A
GLU
186
n
68
GLU
186
A
HIS
187
n
69
HIS
187
A
THR
188
n
70
THR
188
A
VAL
189
n
71
VAL
189
A
THR
190
n
72
THR
190
A
THR
191
n
73
THR
191
A
THR
192
n
74
THR
192
A
THR
193
n
75
THR
193
A
LYS
194
n
76
LYS
194
A
GLY
195
n
77
GLY
195
A
GLU
196
n
78
GLU
196
A
ASN
197
n
79
ASN
197
A
PHE
198
n
80
PHE
198
A
THR
199
n
81
THR
199
A
GLU
200
n
82
GLU
200
A
THR
201
n
83
THR
201
A
ASP
202
n
84
ASP
202
A
ILE
203
n
85
ILE
203
A
LYS
204
n
86
LYS
204
A
MET
205
n
87
MET
205
A
MET
206
n
88
MET
206
A
GLU
207
n
89
GLU
207
A
ARG
208
n
90
ARG
208
A
VAL
209
n
91
VAL
209
A
VAL
210
n
92
VAL
210
A
GLU
211
n
93
GLU
211
A
GLN
212
n
94
GLN
212
A
MET
213
n
95
MET
213
A
CYS
214
n
96
CYS
214
A
ILE
215
n
97
ILE
215
A
THR
216
n
98
THR
216
A
GLN
217
n
99
GLN
217
A
TYR
218
n
100
TYR
218
A
GLN
219
n
101
GLN
219
A
ARG
220
n
102
ARG
220
A
GLU
221
n
103
GLU
221
A
SER
222
n
104
SER
222
A
GLN
223
n
105
GLN
223
A
ALA
224
n
106
ALA
224
A
TYR
225
n
107
TYR
225
A
TYR
226
n
108
TYR
226
A
GLN
227
n
109
GLN
227
A
n
110
228
A
n
111
229
A
n
112
230
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
MET
129
A
N
MET
11
A
O
TYR
163
A
O
TYR
45
1
A
GLY
119
A
GLY
1
1
Y
1
A
SER
120
A
SER
2
1
Y
1
A
VAL
121
A
VAL
3
1
Y
1
A
VAL
122
A
VAL
4
1
Y
1
A
GLY
123
A
GLY
5
1
Y
1
A
ARG
228
A
ARG
110
1
Y
1
A
GLY
229
A
GLY
111
1
Y
1
A
ALA
230
A
ALA
112
1
Y
1
A
ARG
151
0.099
SIDE CHAIN
1
A
TYR
163
0.097
SIDE CHAIN
1
A
PHE
141
-138.22
-40.49
1
A
GLN
168
71.41
-20.26
PRION PROTEIN
MINIMIZED AVERAGE
Bovine prion protein fragment 121-230
1
N
N
A
ASP
144
A
ASP
26
HELX_P
A
GLU
152
A
GLU
34
1
H1
9
A
ASN
173
A
ASN
55
HELX_P
A
THR
192
A
THR
74
1
H2
20
A
GLU
200
A
GLU
82
HELX_P
A
TYR
225
A
TYR
107
1
H3
26
disulf
2.012
A
CYS
179
A
SG
CYS
61
1_555
A
CYS
214
A
SG
CYS
96
1_555
PRION PROTEIN
PRION PROTEIN, PRION, BRAIN
1DWY
PDB
1
1DWY
PRIO_BOVIN
UNP
1
P10279
119
120
1DWY
119
120
1DWY
A
1
1
2
132
241
1DWY
121
230
P10279
A
2
3
112
2
anti-parallel
A
TYR
128
A
TYR
10
A
GLY
131
A
GLY
13
A
VAL
161
A
VAL
43
A
ARG
164
A
ARG
46
1
P 1