0.00 5.411 -9.488 2.240 A O5' DG 1 ATOM A O5' DG 1 1 1.00 1 O 0.00 6.641 -9.427 1.549 A C5' DG 1 ATOM A C5' DG 1 1 1.00 1 C 0.00 7.160 -7.987 1.492 A C4' DG 1 ATOM A C4' DG 1 1 1.00 1 C 0.00 6.219 -7.172 0.808 A O4' DG 1 ATOM A O4' DG 1 1 1.00 1 O 0.00 7.375 -7.379 2.887 A C3' DG 1 ATOM A C3' DG 1 1 1.00 1 C 0.00 8.634 -6.724 2.909 A O3' DG 1 ATOM A O3' DG 1 1 1.00 1 O 0.00 6.209 -6.400 2.989 A C2' DG 1 ATOM A C2' DG 1 1 1.00 1 C 0.00 6.075 -5.968 1.533 A C1' DG 1 ATOM A C1' DG 1 1 1.00 1 C 0.00 4.759 -5.347 1.264 A N9 DG 1 ATOM A N9 DG 1 1 1.00 1 N 0.00 3.516 -5.929 1.303 A C8 DG 1 ATOM A C8 DG 1 1 1.00 1 C 0.00 2.540 -5.127 0.983 A N7 DG 1 ATOM A N7 DG 1 1 1.00 1 N 0.00 3.174 -3.919 0.716 A C5 DG 1 ATOM A C5 DG 1 1 1.00 1 C 0.00 2.627 -2.667 0.303 A C6 DG 1 ATOM A C6 DG 1 1 1.00 1 C 0.00 1.450 -2.393 0.078 A O6 DG 1 ATOM A O6 DG 1 1 1.00 1 O 0.00 3.604 -1.686 0.144 A N1 DG 1 ATOM A N1 DG 1 1 1.00 1 N 0.00 4.958 -1.894 0.342 A C2 DG 1 ATOM A C2 DG 1 1 1.00 1 C 0.00 5.770 -0.842 0.201 A N2 DG 1 ATOM A N2 DG 1 1 1.00 1 N 0.00 5.474 -3.075 0.715 A N3 DG 1 ATOM A N3 DG 1 1 1.00 1 N 0.00 4.533 -4.044 0.887 A C4 DG 1 ATOM A C4 DG 1 1 1.00 1 C 0.00 6.497 -9.801 0.535 A H5' DG 1 ATOM A H5' DG 1 1 1.00 1 H 0.00 7.369 -10.059 2.059 A H5'' DG 1 ATOM A H5'' DG 1 1 1.00 1 H 0.00 8.101 -7.982 0.939 A H4' DG 1 ATOM A H4' DG 1 1 1.00 1 H 0.00 7.332 -8.136 3.672 A H3' DG 1 ATOM A H3' DG 1 1 1.00 1 H 0.00 5.316 -6.939 3.306 A H2' DG 1 ATOM A H2' DG 1 1 1.00 1 H 0.00 6.393 -5.570 3.670 A H2'' DG 1 ATOM A H2'' DG 1 1 1.00 1 H 0.00 6.891 -5.296 1.260 A H1' DG 1 ATOM A H1' DG 1 1 1.00 1 H 0.00 3.359 -6.964 1.567 A H8 DG 1 ATOM A H8 DG 1 1 1.00 1 H 0.00 3.276 -0.764 -0.118 A H1 DG 1 ATOM A H1 DG 1 1 1.00 1 H 0.00 5.391 0.067 -0.029 A H21 DG 1 ATOM A H21 DG 1 1 1.00 1 H 0.00 6.758 -0.951 0.381 A H22 DG 1 ATOM A H22 DG 1 1 1.00 1 H 0.00 4.789 -8.903 1.800 A HO5' DG 1 ATOM A HO5' DG 1 1 1.00 1 H 0.00 9.205 -5.977 4.226 A P DG 2 ATOM A P DG 1 2 1.00 1 P 0.00 10.671 -6.180 4.264 A OP1 DG 2 ATOM A OP1 DG 1 2 1.00 1 O 0.00 8.380 -6.374 5.388 A OP2 DG 2 ATOM A OP2 DG 1 2 1.00 1 O 0.00 8.916 -4.419 3.913 A O5' DG 2 ATOM A O5' DG 1 2 1.00 1 O 0.00 9.658 -3.721 2.930 A C5' DG 2 ATOM A C5' DG 1 2 1.00 1 C 0.00 9.298 -2.231 2.878 A C4' DG 2 ATOM A C4' DG 1 2 1.00 1 C 0.00 7.940 -2.052 2.498 A O4' DG 2 ATOM A O4' DG 1 2 1.00 1 O 0.00 9.442 -1.522 4.232 A C3' DG 2 ATOM A C3' DG 1 2 1.00 1 C 0.00 10.033 -0.243 4.057 A O3' DG 2 ATOM A O3' DG 1 2 1.00 1 O 0.00 8.033 -1.513 4.760 A C2' DG 2 ATOM A C2' DG 1 2 1.00 1 C 0.00 7.323 -1.227 3.474 A C1' DG 2 ATOM A C1' DG 1 2 1.00 1 C 0.00 5.877 -1.491 3.605 A N9 DG 2 ATOM A N9 DG 1 2 1.00 1 N 0.00 5.280 -2.653 4.004 A C8 DG 2 ATOM A C8 DG 1 2 1.00 1 C 0.00 3.981 -2.654 3.901 A N7 DG 2 ATOM A N7 DG 1 2 1.00 1 N 0.00 3.690 -1.371 3.452 A C5 DG 2 ATOM A C5 DG 1 2 1.00 1 C 0.00 2.433 -0.766 3.158 A C6 DG 2 ATOM A C6 DG 1 2 1.00 1 C 0.00 1.329 -1.303 3.127 A O6 DG 2 ATOM A O6 DG 1 2 1.00 1 O 0.00 2.552 0.592 2.873 A N1 DG 2 ATOM A N1 DG 1 2 1.00 1 N 0.00 3.752 1.280 2.840 A C2 DG 2 ATOM A C2 DG 1 2 1.00 1 C 0.00 3.700 2.601 2.644 A N2 DG 2 ATOM A N2 DG 1 2 1.00 1 N 0.00 4.942 0.692 3.031 A N3 DG 2 ATOM A N3 DG 1 2 1.00 1 N 0.00 4.842 -0.627 3.343 A C4 DG 2 ATOM A C4 DG 1 2 1.00 1 C 0.00 9.474 -4.166 1.951 A H5' DG 2 ATOM A H5' DG 1 2 1.00 1 H 0.00 10.722 -3.799 3.156 A H5'' DG 2 ATOM A H5'' DG 1 2 1.00 1 H 0.00 9.966 -1.781 2.137 A H4' DG 2 ATOM A H4' DG 1 2 1.00 1 H 0.00 9.937 -2.085 4.981 A H3' DG 2 ATOM A H3' DG 1 2 1.00 1 H 0.00 7.796 -2.502 5.147 A H2' DG 2 ATOM A H2' DG 1 2 1.00 1 H 0.00 7.878 -0.737 5.494 A H2'' DG 2 ATOM A H2'' DG 1 2 1.00 1 H 0.00 7.586 -0.192 3.331 A H1' DG 2 ATOM A H1' DG 1 2 1.00 1 H 0.00 5.861 -3.485 4.363 A H8 DG 2 ATOM A H8 DG 1 2 1.00 1 H 0.00 1.689 1.090 2.695 A H1 DG 2 ATOM A H1 DG 1 2 1.00 1 H 0.00 2.810 3.066 2.521 A H21 DG 2 ATOM A H21 DG 1 2 1.00 1 H 0.00 4.556 3.136 2.642 A H22 DG 2 ATOM A H22 DG 1 2 1.00 1 H 0.00 10.354 0.754 5.290 A P DT 3 ATOM A P DT 1 3 1.00 1 P 0.00 11.533 1.569 4.923 A OP1 DT 3 ATOM A OP1 DT 1 3 1.00 1 O 0.00 10.367 -0.030 6.546 A OP2 DT 3 ATOM A OP2 DT 1 3 1.00 1 O 0.00 9.062 1.718 5.314 A O5' DT 3 ATOM A O5' DT 1 3 1.00 1 O 0.00 8.799 2.606 4.244 A C5' DT 3 ATOM A C5' DT 1 3 1.00 1 C 0.00 7.572 3.467 4.544 A C4' DT 3 ATOM A C4' DT 1 3 1.00 1 C 0.00 6.431 2.652 4.722 A O4' DT 3 ATOM A O4' DT 1 3 1.00 1 O 0.00 7.734 4.315 5.812 A C3' DT 3 ATOM A C3' DT 1 3 1.00 1 C 0.00 7.351 5.639 5.464 A O3' DT 3 ATOM A O3' DT 1 3 1.00 1 O 0.00 6.753 3.657 6.795 A C2' DT 3 ATOM A C2' DT 1 3 1.00 1 C 0.00 5.690 3.139 5.823 A C1' DT 3 ATOM A C1' DT 1 3 1.00 1 C 0.00 4.832 2.026 6.314 A N1 DT 3 ATOM A N1 DT 1 3 1.00 1 N 0.00 3.463 2.095 6.056 A C2 DT 3 ATOM A C2 DT 1 3 1.00 1 C 0.00 2.883 3.131 5.741 A O2 DT 3 ATOM A O2 DT 1 3 1.00 1 O 0.00 2.761 0.904 6.149 A N3 DT 3 ATOM A N3 DT 1 3 1.00 1 N 0.00 3.278 -0.326 6.519 A C4 DT 3 ATOM A C4 DT 1 3 1.00 1 C 0.00 2.556 -1.321 6.502 A O4 DT 3 ATOM A O4 DT 1 3 1.00 1 O 0.00 4.681 -0.291 6.893 A C5 DT 3 ATOM A C5 DT 1 3 1.00 1 C 0.00 5.347 -1.529 7.466 A C7 DT 3 ATOM A C7 DT 1 3 1.00 1 C 0.00 5.396 0.857 6.771 A C6 DT 3 ATOM A C6 DT 1 3 1.00 1 C 0.00 8.622 2.041 3.329 A H5' DT 3 ATOM A H5' DT 1 3 1.00 1 H 0.00 9.654 3.266 4.090 A H5'' DT 3 ATOM A H5'' DT 1 3 1.00 1 H 0.00 7.399 4.116 3.683 A H4' DT 3 ATOM A H4' DT 1 3 1.00 1 H 0.00 8.767 4.309 6.168 A H3' DT 3 ATOM A H3' DT 1 3 1.00 1 H 0.00 7.204 2.844 7.364 A H2' DT 3 ATOM A H2' DT 1 3 1.00 1 H 0.00 6.375 4.370 7.514 A H2'' DT 3 ATOM A H2'' DT 1 3 1.00 1 H 0.00 5.091 3.989 5.494 A H1' DT 3 ATOM A H1' DT 1 3 1.00 1 H 0.00 1.776 0.946 5.927 A H3 DT 3 ATOM A H3 DT 1 3 1.00 1 H 0.00 5.230 -1.530 8.550 A H71 DT 3 ATOM A H71 DT 1 3 1.00 1 H 0.00 4.890 -2.430 7.058 A H72 DT 3 ATOM A H72 DT 1 3 1.00 1 H 0.00 6.411 -1.539 7.232 A H73 DT 3 ATOM A H73 DT 1 3 1.00 1 H 0.00 6.443 0.846 7.023 A H6 DT 3 ATOM A H6 DT 1 3 1.00 1 H 0.00 7.555 6.898 6.453 A P DC 4 ATOM A P DC 1 4 1.00 1 P 0.00 7.440 8.136 5.650 A OP1 DC 4 ATOM A OP1 DC 1 4 1.00 1 O 0.00 8.766 6.664 7.271 A OP2 DC 4 ATOM A OP2 DC 1 4 1.00 1 O 0.00 6.268 6.795 7.413 A O5' DC 4 ATOM A O5' DC 1 4 1.00 1 O 0.00 4.996 7.271 7.019 A C5' DC 4 ATOM A C5' DC 1 4 1.00 1 C 0.00 3.922 6.862 8.036 A C4' DC 4 ATOM A C4' DC 1 4 1.00 1 C 0.00 3.628 5.486 7.948 A O4' DC 4 ATOM A O4' DC 1 4 1.00 1 O 0.00 4.304 7.127 9.503 A C3' DC 4 ATOM A C3' DC 1 4 1.00 1 C 0.00 3.592 8.281 9.925 A O3' DC 4 ATOM A O3' DC 1 4 1.00 1 O 0.00 3.862 5.835 10.236 A C2' DC 4 ATOM A C2' DC 1 4 1.00 1 C 0.00 2.999 5.151 9.164 A C1' DC 4 ATOM A C1' DC 1 4 1.00 1 C 0.00 2.921 3.674 9.282 A N1 DC 4 ATOM A N1 DC 1 4 1.00 1 N 0.00 1.708 3.031 9.029 A C2 DC 4 ATOM A C2 DC 1 4 1.00 1 C 0.00 0.710 3.658 8.683 A O2 DC 4 ATOM A O2 DC 1 4 1.00 1 O 0.00 1.653 1.676 9.160 A N3 DC 4 ATOM A N3 DC 1 4 1.00 1 N 0.00 2.739 0.969 9.505 A C4 DC 4 ATOM A C4 DC 1 4 1.00 1 C 0.00 2.639 -0.363 9.543 A N4 DC 4 ATOM A N4 DC 1 4 1.00 1 N 0.00 4.022 1.601 9.652 A C5 DC 4 ATOM A C5 DC 1 4 1.00 1 C 0.00 4.059 2.948 9.513 A C6 DC 4 ATOM A C6 DC 1 4 1.00 1 C 0.00 4.728 6.870 6.040 A H5' DC 4 ATOM A H5' DC 1 4 1.00 1 H 0.00 5.029 8.360 6.961 A H5'' DC 4 ATOM A H5'' DC 1 4 1.00 1 H 0.00 3.002 7.398 7.797 A H4' DC 4 ATOM A H4' DC 1 4 1.00 1 H 0.00 5.391 7.287 9.552 A H3' DC 4 ATOM A H3' DC 1 4 1.00 1 H 0.00 4.749 5.259 10.512 A H2' DC 4 ATOM A H2' DC 1 4 1.00 1 H 0.00 3.275 5.958 11.151 A H2'' DC 4 ATOM A H2'' DC 1 4 1.00 1 H 0.00 2.003 5.598 9.206 A H1' DC 4 ATOM A H1' DC 1 4 1.00 1 H 0.00 1.736 -0.794 9.394 A H41 DC 4 ATOM A H41 DC 1 4 1.00 1 H 0.00 3.446 -0.932 9.747 A H42 DC 4 ATOM A H42 DC 1 4 1.00 1 H 0.00 4.937 1.058 9.838 A H5 DC 4 ATOM A H5 DC 1 4 1.00 1 H 0.00 4.994 3.490 9.546 A H6 DC 4 ATOM A H6 DC 1 4 1.00 1 H 0.00 4.001 9.129 11.236 A P DA 5 ATOM A P DA 1 5 1.00 1 P 0.00 3.254 10.407 11.201 A OP1 DA 5 ATOM A OP1 DA 1 5 1.00 1 O 0.00 5.478 9.152 11.334 A OP2 DA 5 ATOM A OP2 DA 1 5 1.00 1 O 0.00 3.437 8.241 12.458 A O5' DA 5 ATOM A O5' DA 1 5 1.00 1 O 0.00 2.206 8.518 13.105 A C5' DA 5 ATOM A C5' DA 1 5 1.00 1 C 0.00 0.968 8.363 12.203 A C4' DA 5 ATOM A C4' DA 1 5 1.00 1 C 0.00 1.089 7.310 11.264 A O4' DA 5 ATOM A O4' DA 1 5 1.00 1 O 0.00 -0.301 8.032 12.958 A C3' DA 5 ATOM A C3' DA 1 5 1.00 1 C 0.00 -0.905 9.104 13.657 A O3' DA 5 ATOM A O3' DA 1 5 1.00 1 O 0.00 -1.207 7.474 11.888 A C2' DA 5 ATOM A C2' DA 1 5 1.00 1 C 0.00 -0.151 6.625 11.199 A C1' DA 5 ATOM A C1' DA 1 5 1.00 1 C 0.00 -0.052 5.226 11.676 A N9 DA 5 ATOM A N9 DA 1 5 1.00 1 N 0.00 -0.763 4.157 11.210 A C8 DA 5 ATOM A C8 DA 1 5 1.00 1 C 0.00 -0.323 2.990 11.600 A N7 DA 5 ATOM A N7 DA 1 5 1.00 1 N 0.00 0.769 3.317 12.400 A C5 DA 5 ATOM A C5 DA 1 5 1.00 1 C 0.00 1.709 2.551 13.125 A C6 DA 5 ATOM A C6 DA 1 5 1.00 1 C 0.00 1.698 1.213 13.155 A N6 DA 5 ATOM A N6 DA 1 5 1.00 1 N 0.00 2.622 3.198 13.877 A N1 DA 5 ATOM A N1 DA 1 5 1.00 1 N 0.00 2.628 4.524 13.885 A C2 DA 5 ATOM A C2 DA 1 5 1.00 1 C 0.00 1.826 5.350 13.233 A N3 DA 5 ATOM A N3 DA 1 5 1.00 1 N 0.00 0.905 4.680 12.494 A C4 DA 5 ATOM A C4 DA 1 5 1.00 1 C 0.00 2.229 9.529 13.512 A H5' DA 5 ATOM A H5' DA 1 5 1.00 1 H 0.00 2.139 7.824 13.941 A H5'' DA 5 ATOM A H5'' DA 1 5 1.00 1 H 0.00 0.747 9.277 11.692 A H4' DA 5 ATOM A H4' DA 1 5 1.00 1 H 0.00 -0.024 7.178 13.521 A H3' DA 5 ATOM A H3' DA 1 5 1.00 1 H 0.00 -2.069 6.905 12.251 A H2' DA 5 ATOM A H2' DA 1 5 1.00 1 H 0.00 -1.533 8.273 11.220 A H2'' DA 5 ATOM A H2'' DA 1 5 1.00 1 H 0.00 -0.476 6.556 10.193 A H1' DA 5 ATOM A H1' DA 1 5 1.00 1 H 0.00 -1.579 4.315 10.527 A H8 DA 5 ATOM A H8 DA 1 5 1.00 1 H 0.00 1.085 0.698 12.538 A H61 DA 5 ATOM A H61 DA 1 5 1.00 1 H 0.00 3.372 4.994 14.502 A H2 DA 5 ATOM A H2 DA 1 5 1.00 1 H 0.00 -0.724 9.315 15.249 A P DC 6 ATOM A P DC 1 6 1.00 1 P 0.00 -1.492 10.518 15.639 A OP1 DC 6 ATOM A OP1 DC 1 6 1.00 1 O 0.00 0.711 9.223 15.593 A OP2 DC 6 ATOM A OP2 DC 1 6 1.00 1 O 0.00 -1.463 8.025 15.871 A O5' DC 6 ATOM A O5' DC 1 6 1.00 1 O 0.00 -2.834 7.777 15.634 A C5' DC 6 ATOM A C5' DC 1 6 1.00 1 C 0.00 -3.338 6.672 16.565 A C4' DC 6 ATOM A C4' DC 1 6 1.00 1 C 0.00 -2.652 5.447 16.323 A O4' DC 6 ATOM A O4' DC 1 6 1.00 1 O 0.00 -3.138 7.035 18.048 A C3' DC 6 ATOM A C3' DC 1 6 1.00 1 C 0.00 -4.377 6.826 18.707 A O3' DC 6 ATOM A O3' DC 1 6 1.00 1 O 0.00 -1.997 6.087 18.415 A C2' DC 6 ATOM A C2' DC 1 6 1.00 1 C 0.00 -2.368 4.869 17.582 A C1' DC 6 ATOM A C1' DC 1 6 1.00 1 C 0.00 -1.224 3.908 17.527 A N1 DC 6 ATOM A N1 DC 1 6 1.00 1 N 0.00 -1.406 2.627 18.060 A C2 DC 6 ATOM A C2 DC 1 6 1.00 1 C 0.00 -2.506 2.248 18.457 A O2 DC 6 ATOM A O2 DC 1 6 1.00 1 O 0.00 -0.337 1.782 18.114 A N3 DC 6 ATOM A N3 DC 1 6 1.00 1 N 0.00 0.870 2.158 17.669 A C4 DC 6 ATOM A C4 DC 1 6 1.00 1 C 0.00 1.878 1.286 17.751 A N4 DC 6 ATOM A N4 DC 1 6 1.00 1 N 0.00 1.079 3.453 17.081 A C5 DC 6 ATOM A C5 DC 1 6 1.00 1 C 0.00 0.012 4.286 17.035 A C6 DC 6 ATOM A C6 DC 1 6 1.00 1 C 0.00 -2.983 7.477 14.597 A H5' DC 6 ATOM A H5' DC 1 6 1.00 1 H 0.00 -3.417 8.678 15.829 A H5'' DC 6 ATOM A H5'' DC 1 6 1.00 1 H 0.00 -4.399 6.519 16.362 A H4' DC 6 ATOM A H4' DC 1 6 1.00 1 H 0.00 -2.866 8.076 18.220 A H3' DC 6 ATOM A H3' DC 1 6 1.00 1 H 0.00 -1.044 6.493 18.067 A H2' DC 6 ATOM A H2' DC 1 6 1.00 1 H 0.00 -1.895 5.870 19.465 A H2'' DC 6 ATOM A H2'' DC 1 6 1.00 1 H 0.00 -3.300 4.439 17.986 A H1' DC 6 ATOM A H1' DC 1 6 1.00 1 H 0.00 1.700 0.360 18.119 A H41 DC 6 ATOM A H41 DC 1 6 1.00 1 H 0.00 2.797 1.537 17.420 A H42 DC 6 ATOM A H42 DC 1 6 1.00 1 H 0.00 2.027 3.784 16.674 A H5 DC 6 ATOM A H5 DC 1 6 1.00 1 H 0.00 0.179 5.278 16.626 A H6 DC 6 ATOM A H6 DC 1 6 1.00 1 H 0.00 -4.630 7.200 20.258 A P DG 7 ATOM A P DG 1 7 1.00 1 P 0.00 -5.692 8.229 20.319 A OP1 DG 7 ATOM A OP1 DG 1 7 1.00 1 O 0.00 -3.326 7.452 20.912 A OP2 DG 7 ATOM A OP2 DG 1 7 1.00 1 O 0.00 -5.217 5.822 20.847 A O5' DG 7 ATOM A O5' DG 1 7 1.00 1 O 0.00 -6.509 5.378 20.475 A C5' DG 7 ATOM A C5' DG 1 7 1.00 1 C 0.00 -6.902 4.086 21.197 A C4' DG 7 ATOM A C4' DG 1 7 1.00 1 C 0.00 -5.927 3.090 20.931 A O4' DG 7 ATOM A O4' DG 1 7 1.00 1 O 0.00 -6.996 4.246 22.721 A C3' DG 7 ATOM A C3' DG 1 7 1.00 1 C 0.00 -8.028 3.389 23.182 A O3' DG 7 ATOM A O3' DG 1 7 1.00 1 O 0.00 -5.603 3.802 23.155 A C2' DG 7 ATOM A C2' DG 1 7 1.00 1 C 0.00 -5.338 2.678 22.152 A C1' DG 7 ATOM A C1' DG 1 7 1.00 1 C 0.00 -3.893 2.438 21.956 A N9 DG 7 ATOM A N9 DG 1 7 1.00 1 N 0.00 -2.893 3.349 21.738 A C8 DG 7 ATOM A C8 DG 1 7 1.00 1 C 0.00 -1.730 2.814 21.483 A N7 DG 7 ATOM A N7 DG 1 7 1.00 1 N 0.00 -1.972 1.444 21.541 A C5 DG 7 ATOM A C5 DG 1 7 1.00 1 C 0.00 -1.094 0.335 21.329 A C6 DG 7 ATOM A C6 DG 1 7 1.00 1 C 0.00 0.091 0.353 21.001 A O6 DG 7 ATOM A O6 DG 1 7 1.00 1 O 0.00 -1.729 -0.888 21.542 A N1 DG 7 ATOM A N1 DG 1 7 1.00 1 N 0.00 -3.065 -1.031 21.881 A C2 DG 7 ATOM A C2 DG 1 7 1.00 1 C 0.00 -3.547 -2.267 22.037 A N2 DG 7 ATOM A N2 DG 1 7 1.00 1 N 0.00 -3.893 0.007 22.047 A N3 DG 7 ATOM A N3 DG 1 7 1.00 1 N 0.00 -3.288 1.210 21.865 A C4 DG 7 ATOM A C4 DG 1 7 1.00 1 C 0.00 -6.528 5.195 19.400 A H5' DG 7 ATOM A H5' DG 1 7 1.00 1 H 0.00 -7.250 6.142 20.712 A H5'' DG 7 ATOM A H5'' DG 1 7 1.00 1 H 0.00 -7.870 3.777 20.795 A H4' DG 7 ATOM A H4' DG 1 7 1.00 1 H 0.00 -7.204 5.277 23.014 A H3' DG 7 ATOM A H3' DG 1 7 1.00 1 H 0.00 -4.922 4.637 23.010 A H2' DG 7 ATOM A H2' DG 1 7 1.00 1 H 0.00 -5.520 3.483 24.191 A H2'' DG 7 ATOM A H2'' DG 1 7 1.00 1 H 0.00 -5.837 1.760 22.473 A H1' DG 7 ATOM A H1' DG 1 7 1.00 1 H 0.00 -3.074 4.414 21.778 A H8 DG 7 ATOM A H8 DG 1 7 1.00 1 H 0.00 -1.155 -1.716 21.437 A H1 DG 7 ATOM A H1 DG 1 7 1.00 1 H 0.00 -2.946 -3.069 21.910 A H21 DG 7 ATOM A H21 DG 1 7 1.00 1 H 0.00 -4.515 -2.393 22.291 A H22 DG 7 ATOM A H22 DG 1 7 1.00 1 H 0.00 -8.381 3.194 24.746 A P DA 8 ATOM A P DA 1 8 1.00 1 P 0.00 -9.847 3.037 24.871 A OP1 DA 8 ATOM A OP1 DA 1 8 1.00 1 O 0.00 -7.685 4.239 25.529 A OP2 DA 8 ATOM A OP2 DA 1 8 1.00 1 O 0.00 -7.691 1.772 25.068 A O5' DA 8 ATOM A O5' DA 1 8 1.00 1 O 0.00 -8.187 0.576 24.495 A C5' DA 8 ATOM A C5' DA 1 8 1.00 1 C 0.00 -7.399 -0.637 24.997 A C4' DA 8 ATOM A C4' DA 1 8 1.00 1 C 0.00 -6.048 -0.539 24.575 A O4' DA 8 ATOM A O4' DA 1 8 1.00 1 O 0.00 -7.408 -0.739 26.530 A C3' DA 8 ATOM A C3' DA 1 8 1.00 1 C 0.00 -7.625 -2.095 26.895 A O3' DA 8 ATOM A O3' DA 1 8 1.00 1 O 0.00 -6.001 -0.266 26.878 A C2' DA 8 ATOM A C2' DA 1 8 1.00 1 C 0.00 -5.217 -0.790 25.690 A C1' DA 8 ATOM A C1' DA 1 8 1.00 1 C 0.00 -3.909 -0.126 25.516 A N9 DA 8 ATOM A N9 DA 1 8 1.00 1 N 0.00 -3.627 1.215 25.514 A C8 DA 8 ATOM A C8 DA 1 8 1.00 1 C 0.00 -2.410 1.510 25.145 A N7 DA 8 ATOM A N7 DA 1 8 1.00 1 N 0.00 -1.830 0.267 24.919 A C5 DA 8 ATOM A C5 DA 1 8 1.00 1 C 0.00 -0.548 -0.135 24.490 A C6 DA 8 ATOM A C6 DA 1 8 1.00 1 C 0.00 0.412 0.728 24.136 A N6 DA 8 ATOM A N6 DA 1 8 1.00 1 N 0.00 -0.289 -1.454 24.406 A N1 DA 8 ATOM A N1 DA 1 8 1.00 1 N 0.00 -1.245 -2.327 24.716 A C2 DA 8 ATOM A C2 DA 1 8 1.00 1 C 0.00 -2.491 -2.077 25.105 A N3 DA 8 ATOM A N3 DA 1 8 1.00 1 N 0.00 -2.725 -0.740 25.187 A C4 DA 8 ATOM A C4 DA 1 8 1.00 1 C 0.00 -8.110 0.625 23.408 A H5' DA 8 ATOM A H5' DA 1 8 1.00 1 H 0.00 -9.235 0.443 24.769 A H5'' DA 8 ATOM A H5'' DA 1 8 1.00 1 H 0.00 -7.836 -1.538 24.565 A H4' DA 8 ATOM A H4' DA 1 8 1.00 1 H 0.00 -8.170 -0.102 26.982 A H3' DA 8 ATOM A H3' DA 1 8 1.00 1 H 0.00 -5.955 0.818 26.957 A H2' DA 8 ATOM A H2' DA 1 8 1.00 1 H 0.00 -5.636 -0.705 27.788 A H2'' DA 8 ATOM A H2'' DA 1 8 1.00 1 H 0.00 -5.096 -1.862 25.836 A H1' DA 8 ATOM A H1' DA 1 8 1.00 1 H 0.00 -4.362 1.955 25.787 A H8 DA 8 ATOM A H8 DA 1 8 1.00 1 H 0.00 1.308 0.395 23.807 A H61 DA 8 ATOM A H61 DA 1 8 1.00 1 H 0.00 0.225 1.720 24.182 A H62 DA 8 ATOM A H62 DA 1 8 1.00 1 H 0.00 -0.982 -3.370 24.630 A H2 DA 8 ATOM A H2 DA 1 8 1.00 1 H 0.00 -7.614 -2.600 28.433 A P DG 9 ATOM A P DG 1 9 1.00 1 P 0.00 -8.461 -3.810 28.526 A OP1 DG 9 ATOM A OP1 DG 1 9 1.00 1 O 0.00 -7.892 -1.443 29.312 A OP2 DG 9 ATOM A OP2 DG 1 9 1.00 1 O 0.00 -6.075 -3.043 28.659 A O5' DG 9 ATOM A O5' DG 1 9 1.00 1 O 0.00 -5.554 -4.212 28.056 A C5' DG 9 ATOM A C5' DG 1 9 1.00 1 C 0.00 -4.122 -4.515 28.515 A C4' DG 9 ATOM A C4' DG 1 9 1.00 1 C 0.00 -3.187 -3.608 27.934 A O4' DG 9 ATOM A O4' DG 1 9 1.00 1 O 0.00 -3.957 -4.395 30.039 A C3' DG 9 ATOM A C3' DG 1 9 1.00 1 C 0.00 -3.152 -5.450 30.525 A O3' DG 9 ATOM A O3' DG 1 9 1.00 1 O 0.00 -3.213 -3.071 30.197 A C2' DG 9 ATOM A C2' DG 1 9 1.00 1 C 0.00 -2.337 -3.099 28.954 A C1' DG 9 ATOM A C1' DG 1 9 1.00 1 C 0.00 -1.733 -1.797 28.581 A N9 DG 9 ATOM A N9 DG 1 9 1.00 1 N 0.00 -2.257 -0.528 28.647 A C8 DG 9 ATOM A C8 DG 1 9 1.00 1 C 0.00 -1.453 0.407 28.227 A N7 DG 9 ATOM A N7 DG 1 9 1.00 1 N 0.00 -0.301 -0.280 27.869 A C5 DG 9 ATOM A C5 DG 1 9 1.00 1 C 0.00 0.936 0.213 27.360 A C6 DG 9 ATOM A C6 DG 1 9 1.00 1 C 0.00 1.219 1.372 27.071 A O6 DG 9 ATOM A O6 DG 1 9 1.00 1 O 0.00 1.886 -0.793 27.194 A N1 DG 9 ATOM A N1 DG 1 9 1.00 1 N 0.00 1.664 -2.127 27.483 A C2 DG 9 ATOM A C2 DG 1 9 1.00 1 C 0.00 2.712 -2.952 27.397 A N2 DG 9 ATOM A N2 DG 1 9 1.00 1 N 0.00 0.490 -2.595 27.936 A N3 DG 9 ATOM A N3 DG 1 9 1.00 1 N 0.00 -0.452 -1.626 28.104 A C4 DG 9 ATOM A C4 DG 1 9 1.00 1 C 0.00 -5.574 -4.115 26.969 A H5' DG 9 ATOM A H5' DG 1 9 1.00 1 H 0.00 -6.176 -5.062 28.341 A H5'' DG 9 ATOM A H5'' DG 1 9 1.00 1 H 0.00 -3.925 -5.540 28.181 A H4' DG 9 ATOM A H4' DG 1 9 1.00 1 H 0.00 -4.908 -4.393 30.572 A H3' DG 9 ATOM A H3' DG 1 9 1.00 1 H 0.00 -3.613 -6.279 30.373 A HO3' DG 9 ATOM A HO3' DG 1 9 1.00 1 H 0.00 -3.921 -2.242 30.170 A H2' DG 9 ATOM A H2' DG 1 9 1.00 1 H 0.00 -2.597 -3.041 31.094 A H2'' DG 9 ATOM A H2'' DG 1 9 1.00 1 H 0.00 -1.518 -3.781 29.187 A H1' DG 9 ATOM A H1' DG 1 9 1.00 1 H 0.00 -3.236 -0.293 29.024 A H8 DG 9 ATOM A H8 DG 1 9 1.00 1 H 0.00 2.802 -0.516 26.864 A H1 DG 9 ATOM A H1 DG 1 9 1.00 1 H 0.00 3.616 -2.610 27.101 A H21 DG 9 ATOM A H21 DG 1 9 1.00 1 H 0.00 2.591 -3.931 27.615 A H22 DG 9 ATOM A H22 DG 1 9 1.00 1 H 0.00 10.663 0.160 24.486 B O5' DC 1 ATOM B O5' DC 2 1 1.00 1 O 0.00 11.330 -0.616 25.457 B C5' DC 1 ATOM B C5' DC 2 1 1.00 1 C 0.00 10.440 -1.717 26.054 B C4' DC 1 ATOM B C4' DC 2 1 1.00 1 C 0.00 9.266 -1.135 26.613 B O4' DC 1 ATOM B O4' DC 2 1 1.00 1 O 0.00 9.931 -2.719 25.008 B C3' DC 1 ATOM B C3' DC 2 1 1.00 1 C 0.00 9.746 -4.001 25.593 B O3' DC 1 ATOM B O3' DC 2 1 1.00 1 O 0.00 8.628 -2.076 24.547 B C2' DC 1 ATOM B C2' DC 2 1 1.00 1 C 0.00 8.133 -1.643 25.914 B C1' DC 1 ATOM B C1' DC 2 1 1.00 1 C 0.00 6.974 -0.707 25.903 B N1 DC 1 ATOM B N1 DC 2 1 1.00 1 N 0.00 5.720 -1.120 26.369 B C2 DC 1 ATOM B C2 DC 2 1 1.00 1 C 0.00 5.513 -2.281 26.711 B O2 DC 1 ATOM B O2 DC 2 1 1.00 1 O 0.00 4.708 -0.201 26.420 B N3 DC 1 ATOM B N3 DC 2 1 1.00 1 N 0.00 4.896 1.062 26.002 B C4 DC 1 ATOM B C4 DC 2 1 1.00 1 C 0.00 3.891 1.937 26.083 B N4 DC 1 ATOM B N4 DC 2 1 1.00 1 N 0.00 6.156 1.482 25.463 B C5 DC 1 ATOM B C5 DC 2 1 1.00 1 C 0.00 7.144 0.568 25.445 B C6 DC 1 ATOM B C6 DC 2 1 1.00 1 C 0.00 11.661 0.046 26.259 B H5' DC 1 ATOM B H5' DC 2 1 1.00 1 H 0.00 12.209 -1.073 25.000 B H5'' DC 1 ATOM B H5'' DC 2 1 1.00 1 H 0.00 11.075 -2.207 26.806 B H4' DC 1 ATOM B H4' DC 2 1 1.00 1 H 0.00 10.612 -2.818 24.189 B H3' DC 1 ATOM B H3' DC 2 1 1.00 1 H 0.00 8.801 -1.313 23.790 B H2' DC 1 ATOM B H2' DC 2 1 1.00 1 H 0.00 7.921 -2.760 24.131 B H2'' DC 1 ATOM B H2'' DC 2 1 1.00 1 H 0.00 7.856 -2.596 26.340 B H1' DC 1 ATOM B H1' DC 2 1 1.00 1 H 0.00 2.998 1.646 26.453 B H41 DC 1 ATOM B H41 DC 2 1 1.00 1 H 0.00 4.016 2.885 25.761 B H42 DC 1 ATOM B H42 DC 2 1 1.00 1 H 0.00 6.375 2.461 25.072 B H5 DC 1 ATOM B H5 DC 2 1 1.00 1 H 0.00 8.068 0.845 24.999 B H6 DC 1 ATOM B H6 DC 2 1 1.00 1 H 0.00 11.273 0.821 24.151 B HO5' DC 1 ATOM B HO5' DC 2 1 1.00 1 H 0.00 9.400 -5.311 24.703 B P DT 2 ATOM B P DT 2 2 1.00 1 P 0.00 10.115 -6.462 25.299 B OP1 DT 2 ATOM B OP1 DT 2 2 1.00 1 O 0.00 9.615 -4.978 23.277 B OP2 DT 2 ATOM B OP2 DT 2 2 1.00 1 O 0.00 7.815 -5.533 24.919 B O5' DT 2 ATOM B O5' DT 2 2 1.00 1 O 0.00 7.303 -6.084 26.119 B C5' DT 2 ATOM B C5' DT 2 2 1.00 1 C 0.00 5.798 -6.345 25.997 B C4' DT 2 ATOM B C4' DT 2 2 1.00 1 C 0.00 5.122 -5.117 25.795 B O4' DT 2 ATOM B O4' DT 2 2 1.00 1 O 0.00 5.444 -7.274 24.824 B C3' DT 2 ATOM B C3' DT 2 2 1.00 1 C 0.00 4.542 -8.267 25.289 B O3' DT 2 ATOM B O3' DT 2 2 1.00 1 O 0.00 4.780 -6.314 23.826 B C2' DT 2 ATOM B C2' DT 2 2 1.00 1 C 0.00 4.158 -5.295 24.779 B C1' DT 2 ATOM B C1' DT 2 2 1.00 1 C 0.00 3.876 -3.974 24.156 B N1 DT 2 ATOM B N1 DT 2 2 1.00 1 N 0.00 2.614 -3.408 24.326 B C2 DT 2 ATOM B C2 DT 2 2 1.00 1 C 0.00 1.643 -4.035 24.740 B O2 DT 2 ATOM B O2 DT 2 2 1.00 1 O 0.00 2.502 -2.063 24.007 B N3 DT 2 ATOM B N3 DT 2 2 1.00 1 N 0.00 3.510 -1.247 23.515 B C4 DT 2 ATOM B C4 DT 2 2 1.00 1 C 0.00 3.303 -0.047 23.354 B O4 DT 2 ATOM B O4 DT 2 2 1.00 1 O 0.00 4.757 -1.942 23.247 B C5 DT 2 ATOM B C5 DT 2 2 1.00 1 C 0.00 5.922 -1.198 22.616 B C7 DT 2 ATOM B C7 DT 2 2 1.00 1 C 0.00 4.892 -3.251 23.579 B C6 DT 2 ATOM B C6 DT 2 2 1.00 1 C 0.00 7.487 -5.396 26.945 B H5' DT 2 ATOM B H5' DT 2 2 1.00 1 H 0.00 7.794 -7.034 26.333 B H5'' DT 2 ATOM B H5'' DT 2 2 1.00 1 H 0.00 5.450 -6.785 26.933 B H4' DT 2 ATOM B H4' DT 2 2 1.00 1 H 0.00 6.340 -7.764 24.430 B H3' DT 2 ATOM B H3' DT 2 2 1.00 1 H 0.00 5.519 -5.855 23.170 B H2' DT 2 ATOM B H2' DT 2 2 1.00 1 H 0.00 4.025 -6.783 23.205 B H2'' DT 2 ATOM B H2'' DT 2 2 1.00 1 H 0.00 3.274 -5.748 25.229 B H1' DT 2 ATOM B H1' DT 2 2 1.00 1 H 0.00 1.593 -1.646 24.151 B H3 DT 2 ATOM B H3 DT 2 2 1.00 1 H 0.00 6.256 -0.404 23.276 B H71 DT 2 ATOM B H71 DT 2 2 1.00 1 H 0.00 6.765 -1.861 22.424 B H72 DT 2 ATOM B H72 DT 2 2 1.00 1 H 0.00 5.613 -0.748 21.676 B H73 DT 2 ATOM B H73 DT 2 2 1.00 1 H 0.00 5.829 -3.748 23.405 B H6 DT 2 ATOM B H6 DT 2 2 1.00 1 H 0.00 4.070 -9.508 24.364 B P DC 3 ATOM B P DC 2 3 1.00 1 P 0.00 3.644 -10.608 25.257 B OP1 DC 3 ATOM B OP1 DC 2 3 1.00 1 O 0.00 5.109 -9.756 23.340 B OP2 DC 3 ATOM B OP2 DC 2 3 1.00 1 O 0.00 2.762 -8.927 23.620 B O5' DC 3 ATOM B O5' DC 2 3 1.00 1 O 0.00 1.503 -8.895 24.263 B C5' DC 3 ATOM B C5' DC 2 3 1.00 1 C 0.00 0.472 -8.131 23.424 B C4' DC 3 ATOM B C4' DC 2 3 1.00 1 C 0.00 0.818 -6.763 23.338 B O4' DC 3 ATOM B O4' DC 2 3 1.00 1 O 0.00 0.331 -8.630 21.975 B C3' DC 3 ATOM B C3' DC 2 3 1.00 1 C 0.00 -0.847 -9.418 21.869 B O3' DC 3 ATOM B O3' DC 2 3 1.00 1 O 0.00 0.249 -7.332 21.145 B C2' DC 3 ATOM B C2' DC 2 3 1.00 1 C 0.00 0.147 -6.243 22.209 B C1' DC 3 ATOM B C1' DC 2 3 1.00 1 C 0.00 0.775 -4.991 21.744 B N1 DC 3 ATOM B N1 DC 2 3 1.00 1 N 0.00 0.024 -3.828 21.601 B C2 DC 3 ATOM B C2 DC 2 3 1.00 1 C 0.00 -1.182 -3.812 21.826 B O2 DC 3 ATOM B O2 DC 2 3 1.00 1 O 0.00 0.658 -2.697 21.186 B N3 DC 3 ATOM B N3 DC 2 3 1.00 1 N 0.00 1.959 -2.714 20.860 B C4 DC 3 ATOM B C4 DC 2 3 1.00 1 C 0.00 2.528 -1.563 20.489 B N4 DC 3 ATOM B N4 DC 2 3 1.00 1 N 0.00 2.727 -3.931 20.925 B C5 DC 3 ATOM B C5 DC 2 3 1.00 1 C 0.00 2.086 -5.027 21.384 B C6 DC 3 ATOM B C6 DC 2 3 1.00 1 C 0.00 1.593 -8.406 25.234 B H5' DC 3 ATOM B H5' DC 2 3 1.00 1 H 0.00 1.149 -9.916 24.412 B H5'' DC 3 ATOM B H5'' DC 2 3 1.00 1 H 0.00 -0.489 -8.223 23.937 B H4' DC 3 ATOM B H4' DC 2 3 1.00 1 H 0.00 1.218 -9.222 21.728 B H3' DC 3 ATOM B H3' DC 2 3 1.00 1 H 0.00 1.112 -7.198 20.482 B H2' DC 3 ATOM B H2' DC 2 3 1.00 1 H 0.00 -0.635 -7.250 20.528 B H2'' DC 3 ATOM B H2'' DC 2 3 1.00 1 H 0.00 -0.895 -6.090 22.452 B H1' DC 3 ATOM B H1' DC 2 3 1.00 1 H 0.00 1.958 -0.727 20.460 B H41 DC 3 ATOM B H41 DC 2 3 1.00 1 H 0.00 3.503 -1.530 20.233 B H42 DC 3 ATOM B H42 DC 2 3 1.00 1 H 0.00 3.755 -4.041 20.631 B H5 DC 3 ATOM B H5 DC 2 3 1.00 1 H 0.00 2.564 -5.991 21.457 B H6 DC 3 ATOM B H6 DC 2 3 1.00 1 H 0.00 -1.338 -10.088 20.477 B P DG 4 ATOM B P DG 2 4 1.00 1 P 0.00 -2.168 -11.269 20.808 B OP1 DG 4 ATOM B OP1 DG 2 4 1.00 1 O 0.00 -0.162 -10.246 19.593 B OP2 DG 4 ATOM B OP2 DG 2 4 1.00 1 O 0.00 -2.306 -8.967 19.826 B O5' DG 4 ATOM B O5' DG 2 4 1.00 1 O 0.00 -3.545 -8.622 20.423 B C5' DG 4 ATOM B C5' DG 2 4 1.00 1 C 0.00 -4.203 -7.451 19.682 B C4' DG 4 ATOM B C4' DG 2 4 1.00 1 C 0.00 -3.329 -6.333 19.709 B O4' DG 4 ATOM B O4' DG 2 4 1.00 1 O 0.00 -4.522 -7.766 18.210 B C3' DG 4 ATOM B C3' DG 2 4 1.00 1 C 0.00 -5.851 -7.361 17.899 B O3' DG 4 ATOM B O3' DG 2 4 1.00 1 O 0.00 -3.513 -6.903 17.467 B C2' DG 4 ATOM B C2' DG 2 4 1.00 1 C 0.00 -3.344 -5.733 18.432 B C1' DG 4 ATOM B C1' DG 2 4 1.00 1 C 0.00 -2.116 -4.925 18.230 B N9 DG 4 ATOM B N9 DG 2 4 1.00 1 N 0.00 -0.852 -5.337 17.890 B C8 DG 4 ATOM B C8 DG 2 4 1.00 1 C 0.00 0.033 -4.381 17.851 B N7 DG 4 ATOM B N7 DG 2 4 1.00 1 N 0.00 -0.698 -3.238 18.152 B C5 DG 4 ATOM B C5 DG 2 4 1.00 1 C 0.00 -0.289 -1.870 18.183 B C6 DG 4 ATOM B C6 DG 2 4 1.00 1 C 0.00 0.840 -1.414 18.024 B O6 DG 4 ATOM B O6 DG 2 4 1.00 1 O 0.00 -1.353 -1.002 18.409 B N1 DG 4 ATOM B N1 DG 2 4 1.00 1 N 0.00 -2.659 -1.407 18.613 B C2 DG 4 ATOM B C2 DG 2 4 1.00 1 C 0.00 -3.571 -0.452 18.820 B N2 DG 4 ATOM B N2 DG 2 4 1.00 1 N 0.00 -3.039 -2.694 18.622 B N3 DG 4 ATOM B N3 DG 2 4 1.00 1 N 0.00 -2.017 -3.559 18.372 B C4 DG 4 ATOM B C4 DG 2 4 1.00 1 C 0.00 -3.379 -8.326 21.460 B H5' DG 4 ATOM B H5' DG 2 4 1.00 1 H 0.00 -4.216 -9.481 20.404 B H5'' DG 4 ATOM B H5'' DG 2 4 1.00 1 H 0.00 -5.126 -7.190 20.202 B H4' DG 4 ATOM B H4' DG 2 4 1.00 1 H 0.00 -4.379 -8.824 17.988 B H3' DG 4 ATOM B H3' DG 2 4 1.00 1 H 0.00 -2.580 -7.431 17.347 B H2' DG 4 ATOM B H2' DG 2 4 1.00 1 H 0.00 -3.890 -6.635 16.491 B H2'' DG 4 ATOM B H2'' DG 2 4 1.00 1 H 0.00 -4.222 -5.105 18.344 B H1' DG 4 ATOM B H1' DG 2 4 1.00 1 H 0.00 -0.613 -6.360 17.646 B H8 DG 4 ATOM B H8 DG 2 4 1.00 1 H 0.00 -1.132 -0.014 18.424 B H1 DG 4 ATOM B H1 DG 2 4 1.00 1 H 0.00 -3.302 0.522 18.814 B H21 DG 4 ATOM B H21 DG 2 4 1.00 1 H 0.00 -4.532 -0.710 18.987 B H22 DG 4 ATOM B H22 DG 2 4 1.00 1 H 0.00 -6.560 -7.688 16.472 B P DG 5 ATOM B P DG 2 5 1.00 1 P 0.00 -8.023 -7.684 16.692 B OP1 DG 5 ATOM B OP1 DG 2 5 1.00 1 O 0.00 -5.916 -8.893 15.903 B OP2 DG 5 ATOM B OP2 DG 2 5 1.00 1 O 0.00 -6.213 -6.434 15.503 B O5' DG 5 ATOM B O5' DG 2 5 1.00 1 O 0.00 -6.444 -6.516 14.105 B C5' DG 5 ATOM B C5' DG 2 5 1.00 1 C 0.00 -6.338 -5.145 13.420 B C4' DG 5 ATOM B C4' DG 2 5 1.00 1 C 0.00 -5.015 -4.645 13.404 B O4' DG 5 ATOM B O4' DG 2 5 1.00 1 O 0.00 -6.770 -5.196 11.945 B C3' DG 5 ATOM B C3' DG 2 5 1.00 1 C 0.00 -8.060 -4.616 11.826 B O3' DG 5 ATOM B O3' DG 2 5 1.00 1 O 0.00 -5.678 -4.380 11.222 B C2' DG 5 ATOM B C2' DG 2 5 1.00 1 C 0.00 -4.972 -3.678 12.374 B C1' DG 5 ATOM B C1' DG 2 5 1.00 1 C 0.00 -3.579 -3.281 12.053 B N9 DG 5 ATOM B N9 DG 2 5 1.00 1 N 0.00 -2.495 -4.091 11.826 B C8 DG 5 ATOM B C8 DG 2 5 1.00 1 C 0.00 -1.368 -3.452 11.679 B N7 DG 5 ATOM B N7 DG 2 5 1.00 1 N 0.00 -1.724 -2.115 11.804 B C5 DG 5 ATOM B C5 DG 2 5 1.00 1 C 0.00 -0.910 -0.942 11.761 B C6 DG 5 ATOM B C6 DG 2 5 1.00 1 C 0.00 0.308 -0.868 11.626 B O6 DG 5 ATOM B O6 DG 2 5 1.00 1 O 0.00 -1.652 0.229 11.887 B N1 DG 5 ATOM B N1 DG 2 5 1.00 1 N 0.00 -3.023 0.264 12.062 B C2 DG 5 ATOM B C2 DG 2 5 1.00 1 C 0.00 -3.587 1.471 12.166 B N2 DG 5 ATOM B N2 DG 2 5 1.00 1 N 0.00 -3.787 -0.839 12.142 B N3 DG 5 ATOM B N3 DG 2 5 1.00 1 N 0.00 -3.081 -1.996 12.003 B C4 DG 5 ATOM B C4 DG 2 5 1.00 1 C 0.00 -7.455 -6.892 13.940 B H5' DG 5 ATOM B H5' DG 2 5 1.00 1 H 0.00 -5.732 -7.209 13.654 B H5'' DG 5 ATOM B H5'' DG 2 5 1.00 1 H 0.00 -6.966 -4.431 13.956 B H4' DG 5 ATOM B H4' DG 2 5 1.00 1 H 0.00 -6.816 -6.237 11.607 B H3' DG 5 ATOM B H3' DG 2 5 1.00 1 H 0.00 -4.961 -5.016 10.694 B H2' DG 5 ATOM B H2' DG 2 5 1.00 1 H 0.00 -6.084 -3.644 10.534 B H2'' DG 5 ATOM B H2'' DG 2 5 1.00 1 H 0.00 -5.559 -2.805 12.660 B H1' DG 5 ATOM B H1' DG 2 5 1.00 1 H 0.00 -2.562 -5.169 11.797 B H8 DG 5 ATOM B H8 DG 2 5 1.00 1 H 0.00 -1.143 1.103 11.832 B H1 DG 5 ATOM B H1 DG 2 5 1.00 1 H 0.00 -3.020 2.306 12.112 B H21 DG 5 ATOM B H21 DG 2 5 1.00 1 H 0.00 -4.586 1.541 12.293 B H22 DG 5 ATOM B H22 DG 2 5 1.00 1 H 0.00 -8.873 -4.579 10.427 B P DG 6 ATOM B P DG 2 6 1.00 1 P 0.00 -10.317 -4.484 10.736 B OP1 DG 6 ATOM B OP1 DG 2 6 1.00 1 O 0.00 -8.378 -5.676 9.565 B OP2 DG 6 ATOM B OP2 DG 2 6 1.00 1 O 0.00 -8.407 -3.180 9.774 B O5' DG 6 ATOM B O5' DG 2 6 1.00 1 O 0.00 -8.827 -1.942 10.314 B C5' DG 6 ATOM B C5' DG 2 6 1.00 1 C 0.00 -8.154 -0.776 9.584 B C4' DG 6 ATOM B C4' DG 2 6 1.00 1 C 0.00 -6.756 -0.781 9.837 B O4' DG 6 ATOM B O4' DG 2 6 1.00 1 O 0.00 -8.349 -0.837 8.059 B C3' DG 6 ATOM B C3' DG 2 6 1.00 1 C 0.00 -8.711 0.458 7.609 B O3' DG 6 ATOM B O3' DG 2 6 1.00 1 O 0.00 -6.951 -1.249 7.593 B C2' DG 6 ATOM B C2' DG 2 6 1.00 1 C 0.00 -6.103 -0.504 8.615 B C1' DG 6 ATOM B C1' DG 2 6 1.00 1 C 0.00 -4.700 -0.970 8.628 B N9 DG 6 ATOM B N9 DG 2 6 1.00 1 N 0.00 -4.227 -2.256 8.682 B C8 DG 6 ATOM B C8 DG 2 6 1.00 1 C 0.00 -2.929 -2.351 8.713 B N7 DG 6 ATOM B N7 DG 2 6 1.00 1 N 0.00 -2.501 -1.030 8.674 B C5 DG 6 ATOM B C5 DG 2 6 1.00 1 C 0.00 -1.179 -0.495 8.725 B C6 DG 6 ATOM B C6 DG 2 6 1.00 1 C 0.00 -0.125 -1.112 8.846 B O6 DG 6 ATOM B O6 DG 2 6 1.00 1 O 0.00 -1.166 0.897 8.677 B N1 DG 6 ATOM B N1 DG 2 6 1.00 1 N 0.00 -2.298 1.680 8.539 B C2 DG 6 ATOM B C2 DG 2 6 1.00 1 C 0.00 -2.119 2.991 8.363 B N2 DG 6 ATOM B N2 DG 2 6 1.00 1 N 0.00 -3.543 1.181 8.521 B N3 DG 6 ATOM B N3 DG 2 6 1.00 1 N 0.00 -3.577 -0.177 8.604 B C4 DG 6 ATOM B C4 DG 2 6 1.00 1 C 0.00 -8.570 -1.890 11.374 B H5' DG 6 ATOM B H5' DG 2 6 1.00 1 H 0.00 -9.909 -1.848 10.207 B H5'' DG 6 ATOM B H5'' DG 2 6 1.00 1 H 0.00 -8.574 0.154 9.972 B H4' DG 6 ATOM B H4' DG 2 6 1.00 1 H 0.00 -9.123 -1.545 7.758 B H3' DG 6 ATOM B H3' DG 2 6 1.00 1 H 0.00 -6.812 -2.326 7.706 B H2' DG 6 ATOM B H2' DG 2 6 1.00 1 H 0.00 -6.717 -0.963 6.573 B H2'' DG 6 ATOM B H2'' DG 2 6 1.00 1 H 0.00 -6.151 0.567 8.413 B H1' DG 6 ATOM B H1' DG 2 6 1.00 1 H 0.00 -4.879 -3.114 8.698 B H8 DG 6 ATOM B H8 DG 2 6 1.00 1 H 0.00 -0.256 1.340 8.715 B H1 DG 6 ATOM B H1 DG 2 6 1.00 1 H 0.00 -1.185 3.379 8.343 B H21 DG 6 ATOM B H21 DG 2 6 1.00 1 H 0.00 -2.920 3.587 8.216 B H22 DG 6 ATOM B H22 DG 2 6 1.00 1 H 0.00 -9.129 0.769 6.080 B P DA 7 ATOM B P DA 2 7 1.00 1 P 0.00 -10.457 1.423 6.086 B OP1 DA 7 ATOM B OP1 DA 2 7 1.00 1 O 0.00 -8.911 -0.445 5.262 B OP2 DA 7 ATOM B OP2 DA 2 7 1.00 1 O 0.00 -8.025 1.861 5.655 B O5' DA 7 ATOM B O5' DA 2 7 1.00 1 O 0.00 -8.046 3.171 6.193 B C5' DA 7 ATOM B C5' DA 2 7 1.00 1 C 0.00 -6.870 3.990 5.655 B C4' DA 7 ATOM B C4' DA 2 7 1.00 1 C 0.00 -5.655 3.381 6.070 B O4' DA 7 ATOM B O4' DA 2 7 1.00 1 O 0.00 -6.868 4.061 4.119 B C3' DA 7 ATOM B C3' DA 2 7 1.00 1 C 0.00 -6.512 5.376 3.721 B O3' DA 7 ATOM B O3' DA 2 7 1.00 1 O 0.00 -5.803 3.026 3.771 B C2' DA 7 ATOM B C2' DA 2 7 1.00 1 C 0.00 -4.838 3.199 4.932 B C1' DA 7 ATOM B C1' DA 2 7 1.00 1 C 0.00 -3.965 2.016 5.084 B N9 DA 7 ATOM B N9 DA 2 7 1.00 1 N 0.00 -4.329 0.695 5.125 B C8 DA 7 ATOM B C8 DA 2 7 1.00 1 C 0.00 -3.336 -0.133 5.296 B N7 DA 7 ATOM B N7 DA 2 7 1.00 1 N 0.00 -2.226 0.702 5.369 B C5 DA 7 ATOM B C5 DA 2 7 1.00 1 C 0.00 -0.849 0.458 5.556 B C6 DA 7 ATOM B C6 DA 2 7 1.00 1 C 0.00 -0.343 -0.767 5.741 B N6 DA 7 ATOM B N6 DA 2 7 1.00 1 N 0.00 -0.013 1.514 5.585 B N1 DA 7 ATOM B N1 DA 2 7 1.00 1 N 0.00 -0.505 2.738 5.410 B C2 DA 7 ATOM B C2 DA 2 7 1.00 1 C 0.00 -1.772 3.098 5.228 B N3 DA 7 ATOM B N3 DA 2 7 1.00 1 N 0.00 -2.598 2.016 5.222 B C4 DA 7 ATOM B C4 DA 2 7 1.00 1 C 0.00 -7.977 3.125 7.281 B H5' DA 7 ATOM B H5' DA 2 7 1.00 1 H 0.00 -8.977 3.668 5.918 B H5'' DA 7 ATOM B H5'' DA 2 7 1.00 1 H 0.00 -6.931 4.995 6.074 B H4' DA 7 ATOM B H4' DA 2 7 1.00 1 H 0.00 -7.838 3.796 3.697 B H3' DA 7 ATOM B H3' DA 2 7 1.00 1 H 0.00 -6.269 2.037 3.735 B H2' DA 7 ATOM B H2' DA 2 7 1.00 1 H 0.00 -5.266 3.218 2.854 B H2'' DA 7 ATOM B H2'' DA 2 7 1.00 1 H 0.00 -4.253 4.103 4.750 B H1' DA 7 ATOM B H1' DA 2 7 1.00 1 H 0.00 -5.357 0.383 5.013 B H8 DA 7 ATOM B H8 DA 2 7 1.00 1 H 0.00 0.648 -0.895 5.893 B H61 DA 7 ATOM B H61 DA 2 7 1.00 1 H 0.00 -0.962 -1.565 5.741 B H62 DA 7 ATOM B H62 DA 2 7 1.00 1 H 0.00 0.212 3.545 5.435 B H2 DA 7 ATOM B H2 DA 2 7 1.00 1 H 0.00 -6.387 5.818 2.169 B P DC 8 ATOM B P DC 2 8 1.00 1 P 0.00 -6.915 7.195 2.037 B OP1 DC 8 ATOM B OP1 DC 2 8 1.00 1 O 0.00 -6.931 4.737 1.317 B OP2 DC 8 ATOM B OP2 DC 2 8 1.00 1 O 0.00 -4.789 5.869 1.958 B O5' DC 8 ATOM B O5' DC 2 8 1.00 1 O 0.00 -4.003 6.843 2.618 B C5' DC 8 ATOM B C5' DC 2 8 1.00 1 C 0.00 -2.514 6.625 2.341 B C4' DC 8 ATOM B C4' DC 2 8 1.00 1 C 0.00 -2.147 5.319 2.760 B O4' DC 8 ATOM B O4' DC 2 8 1.00 1 O 0.00 -2.141 6.764 0.855 B C3' DC 8 ATOM B C3' DC 2 8 1.00 1 C 0.00 -0.943 7.522 0.784 B O3' DC 8 ATOM B O3' DC 2 8 1.00 1 O 0.00 -1.934 5.300 0.451 B C2' DC 8 ATOM B C2' DC 2 8 1.00 1 C 0.00 -1.347 4.747 1.747 B C1' DC 8 ATOM B C1' DC 2 8 1.00 1 C 0.00 -1.373 3.264 1.833 B N1 DC 8 ATOM B N1 DC 2 8 1.00 1 N 0.00 -0.208 2.572 2.172 B C2 DC 8 ATOM B C2 DC 2 8 1.00 1 C 0.00 0.875 3.144 2.277 B O2 DC 8 ATOM B O2 DC 2 8 1.00 1 O 0.00 -0.286 1.226 2.373 B N3 DC 8 ATOM B N3 DC 2 8 1.00 1 N 0.00 -1.442 0.563 2.223 B C4 DC 8 ATOM B C4 DC 2 8 1.00 1 C 0.00 -1.465 -0.748 2.476 B N4 DC 8 ATOM B N4 DC 2 8 1.00 1 N 0.00 -2.640 1.250 1.836 B C5 DC 8 ATOM B C5 DC 2 8 1.00 1 C 0.00 -2.550 2.583 1.661 B C6 DC 8 ATOM B C6 DC 2 8 1.00 1 C 0.00 -4.166 6.776 3.695 B H5' DC 8 ATOM B H5' DC 2 8 1.00 1 H 0.00 -4.286 7.842 2.281 B H5'' DC 8 ATOM B H5'' DC 2 8 1.00 1 H 0.00 -1.954 7.354 2.928 B H4' DC 8 ATOM B H4' DC 2 8 1.00 1 H 0.00 -2.921 7.270 0.279 B H3' DC 8 ATOM B H3' DC 2 8 1.00 1 H 0.00 -2.892 4.829 0.226 B H2' DC 8 ATOM B H2' DC 2 8 1.00 1 H 0.00 -1.261 5.168 -0.392 B H2'' DC 8 ATOM B H2'' DC 2 8 1.00 1 H 0.00 -0.341 5.142 1.850 B H1' DC 8 ATOM B H1' DC 2 8 1.00 1 H 0.00 -0.607 -1.208 2.754 B H41 DC 8 ATOM B H41 DC 2 8 1.00 1 H 0.00 -2.326 -1.269 2.408 B H42 DC 8 ATOM B H42 DC 2 8 1.00 1 H 0.00 -3.607 0.800 1.689 B H5 DC 8 ATOM B H5 DC 2 8 1.00 1 H 0.00 -3.442 3.104 1.372 B H6 DC 8 ATOM B H6 DC 2 8 1.00 1 H 0.00 -0.179 7.853 -0.602 B P DC 9 ATOM B P DC 2 9 1.00 1 P 0.00 0.231 9.274 -0.576 B OP1 DC 9 ATOM B OP1 DC 2 9 1.00 1 O 0.00 -0.986 7.343 -1.734 B OP2 DC 9 ATOM B OP2 DC 2 9 1.00 1 O 0.00 1.148 6.942 -0.478 B O5' DC 9 ATOM B O5' DC 2 9 1.00 1 O 0.00 2.130 7.219 0.503 B C5' DC 9 ATOM B C5' DC 2 9 1.00 1 C 0.00 3.335 6.278 0.389 B C4' DC 9 ATOM B C4' DC 2 9 1.00 1 C 0.00 2.923 4.937 0.627 B O4' DC 9 ATOM B O4' DC 2 9 1.00 1 O 0.00 3.975 6.310 -1.006 B C3' DC 9 ATOM B C3' DC 2 9 1.00 1 C 0.00 5.374 6.145 -0.899 B O3' DC 9 ATOM B O3' DC 2 9 1.00 1 O 0.00 3.369 5.073 -1.668 B C2' DC 9 ATOM B C2' DC 2 9 1.00 1 C 0.00 3.319 4.125 -0.469 B C1' DC 9 ATOM B C1' DC 2 9 1.00 1 C 0.00 2.370 2.992 -0.651 B N1 DC 9 ATOM B N1 DC 2 9 1.00 1 N 0.00 2.819 1.682 -0.464 B C2 DC 9 ATOM B C2 DC 2 9 1.00 1 C 0.00 4.007 1.424 -0.285 B O2 DC 9 ATOM B O2 DC 2 9 1.00 1 O 0.00 1.907 0.669 -0.497 B N3 DC 9 ATOM B N3 DC 2 9 1.00 1 N 0.00 0.611 0.908 -0.741 B C4 DC 9 ATOM B C4 DC 2 9 1.00 1 C 0.00 -0.244 -0.120 -0.720 B N4 DC 9 ATOM B N4 DC 2 9 1.00 1 N 0.00 0.139 2.238 -1.004 B C5 DC 9 ATOM B C5 DC 2 9 1.00 1 C 0.00 1.050 3.234 -0.939 B C6 DC 9 ATOM B C6 DC 2 9 1.00 1 C 0.00 1.694 7.114 1.498 B H5' DC 9 ATOM B H5' DC 2 9 1.00 1 H 0.00 2.486 8.244 0.384 B H5'' DC 9 ATOM B H5'' DC 2 9 1.00 1 H 0.00 4.054 6.599 1.148 B H4' DC 9 ATOM B H4' DC 2 9 1.00 1 H 0.00 3.770 7.240 -1.542 B H3' DC 9 ATOM B H3' DC 2 9 1.00 1 H 0.00 5.733 6.890 -0.412 B HO3' DC 9 ATOM B HO3' DC 2 9 1.00 1 H 0.00 2.375 5.295 -2.055 B H2' DC 9 ATOM B H2' DC 2 9 1.00 1 H 0.00 3.980 4.670 -2.471 B H2'' DC 9 ATOM B H2'' DC 2 9 1.00 1 H 0.00 4.335 3.767 -0.291 B H1' DC 9 ATOM B H1' DC 2 9 1.00 1 H 0.00 0.107 -1.043 -0.501 B H41 DC 9 ATOM B H41 DC 2 9 1.00 1 H 0.00 -1.228 0.029 -0.886 B H42 DC 9 ATOM B H42 DC 2 9 1.00 1 H 0.00 -0.884 2.495 -1.226 B H5 DC 9 ATOM B H5 DC 2 9 1.00 1 H 0.00 0.718 4.240 -1.118 B H6 DC 9 ATOM B H6 DC 2 9 1.00 1 H 0.00 -4.490 -2.431 15.602 A C1 BAP 10 HETATM C C1 BAP 3 1.00 1 C 0.00 -5.033 -1.167 15.752 A C2 BAP 10 HETATM C C2 BAP 3 1.00 1 C 0.00 -4.198 -0.046 15.655 A C3 BAP 10 HETATM C C3 BAP 3 1.00 1 C 0.00 -2.817 -0.218 15.405 A C3A BAP 10 HETATM C C3A BAP 3 1.00 1 C 0.00 -1.973 0.899 15.309 A C4 BAP 10 HETATM C C4 BAP 3 1.00 1 C 0.00 -0.612 0.723 15.058 A C5 BAP 10 HETATM C C5 BAP 3 1.00 1 C 0.00 -0.075 -0.571 14.858 A C5A BAP 10 HETATM C C5A BAP 3 1.00 1 C 0.00 1.286 -0.761 14.482 A C6 BAP 10 HETATM C C6 BAP 3 1.00 1 C 0.00 1.769 -2.058 14.224 A C7 BAP 10 HETATM C C7 BAP 3 1.00 1 C 0.00 0.928 -3.151 14.450 A C8 BAP 10 HETATM C C8 BAP 3 1.00 1 C 0.00 -0.418 -2.949 14.787 A C8A BAP 10 HETATM C C8A BAP 3 1.00 1 C 0.00 -1.261 -4.064 14.906 A C9 BAP 10 HETATM C C9 BAP 3 1.00 1 C 0.00 -2.603 -3.879 15.198 A C10 BAP 10 HETATM C C10 BAP 3 1.00 1 C 0.00 -3.119 -2.590 15.347 A C1A BAP 10 HETATM C C1A BAP 3 1.00 1 C 0.00 -2.282 -1.490 15.243 A C3B BAP 10 HETATM C C3B BAP 3 1.00 1 C 0.00 -0.924 -1.667 14.967 A C5B BAP 10 HETATM C C5B BAP 3 1.00 1 C 0.00 3.168 -2.296 13.682 A C1' BAP 10 HETATM C C1' BAP 3 1.00 1 C 0.00 3.122 -3.263 12.653 A O1' BAP 10 HETATM C O1' BAP 3 1.00 1 O 0.00 3.843 -1.049 13.108 A C2' BAP 10 HETATM C C2' BAP 3 1.00 1 C 0.00 5.209 -1.304 12.859 A O2' BAP 10 HETATM C O2' BAP 3 1.00 1 O 0.00 3.699 0.097 14.104 A C3' BAP 10 HETATM C C3' BAP 3 1.00 1 C 0.00 4.262 -0.267 15.349 A O3' BAP 10 HETATM C O3' BAP 3 1.00 1 O 0.00 2.213 0.428 14.286 A C4' BAP 10 HETATM C C4' BAP 3 1.00 1 C 0.00 -5.160 -3.268 15.672 A H1 BAP 10 HETATM C H1 BAP 3 1.00 1 H 0.00 -6.088 -1.133 15.940 A H2 BAP 10 HETATM C H2 BAP 3 1.00 1 H 0.00 -4.616 0.943 15.777 A H3 BAP 10 HETATM C H3 BAP 3 1.00 1 H 0.00 -2.366 1.898 15.421 A H4 BAP 10 HETATM C H4 BAP 3 1.00 1 H 0.00 -0.013 1.615 15.011 A H5 BAP 10 HETATM C H5 BAP 3 1.00 1 H 0.00 1.288 -4.161 14.315 A H8 BAP 10 HETATM C H8 BAP 3 1.00 1 H 0.00 -0.894 -5.067 14.770 A H9 BAP 10 HETATM C H9 BAP 3 1.00 1 H 0.00 -3.244 -4.724 15.310 A H10 BAP 10 HETATM C H10 BAP 3 1.00 1 H 0.00 3.778 -2.694 14.494 A H1' BAP 10 HETATM C H1' BAP 3 1.00 1 H 0.00 4.013 -3.389 12.318 A HO1 BAP 10 HETATM C HO1 BAP 3 1.00 1 H 0.00 3.364 -0.771 12.169 A H2' BAP 10 HETATM C H2' BAP 3 1.00 1 H 0.00 5.639 -1.482 13.699 A HO2 BAP 10 HETATM C HO2 BAP 3 1.00 1 H 0.00 4.236 0.971 13.733 A H3' BAP 10 HETATM C H3' BAP 3 1.00 1 H 0.00 4.176 0.475 15.950 A HO3 BAP 10 HETATM C HO3 BAP 3 1.00 1 H 0.00 2.153 1.035 15.186 A H4'1 BAP 10 HETATM C H4'1 BAP 3 1.00 1 H 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Yeh, H.J.C. Sayer, J.M. Liu, X. Altieri, A.S. Byrd, R.A. Lakshman, M.K. Yagi, H. Schurter, E.J. Gorenstein, D.G. Jerina, D.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C20 H16 O3 304.339 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE non-polymer C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking Y 1 N C Y 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N C Y 7 N C Y 8 N C Y 9 N C Y 10 N C Y 11 N C Y 12 N C Y 13 N C Y 14 N C Y 15 N C Y 16 N C N 17 R C N 18 N O N 19 R C N 20 N O N 21 R C N 22 N O N 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N O N 41 N P N 42 N O N 43 N O N 44 N O N 45 N C N 46 R C N 47 N O N 48 S C N 49 N O N 50 N C N 51 R C Y 52 N N Y 53 N C Y 54 N N Y 55 N C Y 56 N C N 57 N N Y 58 N N Y 59 N C Y 60 N N Y 61 N C N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N O N 77 N P N 78 N O N 79 N O N 80 N O N 81 N C N 82 R C N 83 N O N 84 S C N 85 N O N 86 N C N 87 R C N 88 N N N 89 N C N 90 N O N 91 N N N 92 N C N 93 N N N 94 N C N 95 N C N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N O N 111 N P N 112 N O N 113 N O N 114 N O N 115 N C N 116 R C N 117 N O N 118 S C N 119 N O N 120 N C N 121 R C Y 122 N N Y 123 N C Y 124 N N Y 125 N C N 126 N C N 127 N O N 128 N N N 129 N C N 130 N N N 131 N N Y 132 N C N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N O N 148 N P N 149 N O N 150 N O N 151 N O N 152 N C N 153 R C N 154 N O N 155 S C N 156 N O N 157 N C N 158 R C N 159 N N N 160 N C N 161 N O N 162 N N N 163 N C N 164 N O N 165 N C N 166 N C N 167 N C N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H Y 1 N doub Y 2 N sing N 3 N sing Y 4 N sing N 5 N sing Y 6 N doub N 7 N sing Y 8 N sing Y 9 N sing Y 10 N doub N 11 N sing Y 12 N sing N 13 N sing Y 14 N doub Y 15 N sing Y 16 N sing N 17 N sing Y 18 N doub N 19 N sing Y 20 N sing N 21 N sing Y 22 N doub Y 23 N sing Y 24 N sing N 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N doub N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing Y 67 N sing Y 68 N sing Y 69 N doub N 70 N sing Y 71 N sing Y 72 N sing Y 73 N doub N 74 N sing Y 75 N doub N 76 N sing N 77 N sing Y 78 N sing Y 79 N doub N 80 N sing Y 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N sing Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N doub N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing US Biochemistry BICHAW 0033 0006-2960 34 13570 13581 10.1021/bi00041a037 7577946 NMR solution structure of a nonanucleotide duplex with a dG mismatch opposite a 10S adduct derived from trans addition of a deoxyadenosine N6-amino group to (+)-(7R,8S,9S,10R)-7,8-dihydroxy-9,10-epoxy-7,8,9,10- tetrahydrobenzo[a]pyrene: an unusual syn glycosidic torsion angle at the modified dA 1995 10.2210/pdb1dxa/pdb pdb_00001dxa 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 BENZO[A]PYRENE DIOL EPOXIDE ADDUCT OF DA 2780.836 DNA (5'-D(*GP*GP*TP*CP*AP*CP*GP*AP*G)-3') 1 syn polymer BENZO[A]PYRENE DIOL EPOXIDE ADDUCT OF DA 2716.787 DNA (5'-D(*CP*TP*CP*GP*GP*GP*AP*CP*C)-3') 1 syn polymer chemically synthesized 304.339 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE 1 syn non-polymer DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID no no (DG)(DG)(DT)(DC)(DA)(DC)(DG)(DA)(DG) GGTCACGAG A polydeoxyribonucleotide no no (DC)(DT)(DC)(DG)(DG)(DG)(DA)(DC)(DC) CTCGGGACC B polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n 8.126 1 19 A 1 B 9 -1.433 A_DG1:DC9_B 1 -5.923 -0.950 0.123 -0.293 -2.005 1 19 A 2 B 8 -1.499 A_DG2:DC8_B 2 -10.092 -1.004 0.001 -0.354 5.711 1 20 A 3 B 7 1.754 A_DT3:DA7_B 3 -8.808 0.402 -0.015 -0.104 5.815 1 19 A 4 B 6 -1.811 A_DC4:DG6_B 4 -7.584 0.730 0.226 -0.217 41.195 9 A 5 B 5 90.797 A_DA5:DG5_B 5 21.481 -0.021 -1.217 -4.454 -26.293 1 19 A 6 B 4 -2.966 A_DC6:DG4_B 6 2.338 0.560 0.661 -0.086 10.862 1 19 A 7 B 3 3.263 A_DG7:DC3_B 7 -5.893 -1.226 0.223 -0.301 7.669 1 20 A 8 B 2 4.234 A_DA8:DT2_B 8 -13.597 -0.505 -0.130 -0.145 1.349 1 19 A 9 B 1 -2.969 A_DG9:DC1_B 9 -8.773 0.195 -0.174 -0.024 3.375 39.707 A A 1 2 -0.157 B B 9 8 3.373 -0.106 0.033 -0.951 AA_DG1DG2:DC8DC9_BB 1 1.027 -1.512 39.694 -1.388 0.075 2.944 41.911 A A 2 3 4.558 B B 8 7 2.990 3.257 0.024 -0.509 AA_DG2DT3:DA7DC8_BB 2 0.263 -0.368 41.789 -1.020 -0.008 3.036 33.785 A A 3 4 8.960 B B 7 6 3.150 5.186 0.560 -0.376 AA_DT3DC4:DG6DA7_BB 3 -1.244 2.149 33.373 -1.446 -1.154 -0.086 170.390 A A 4 5 9.661 B B 6 5 2.146 18.315 -0.267 -3.791 AA_DC4DA5:DG5DG6_BB 4 -169.400 89.354 2.982 -2.011 -0.867 0.254 157.326 A A 5 6 -43.319 B B 5 4 -1.793 -80.862 -1.494 -5.703 AA_DA5DC6:DG4DG5_BB 5 127.489 -68.297 76.680 -3.108 0.447 2.216 26.648 A A 6 7 2.844 B B 4 3 2.267 1.310 -0.783 -0.554 AA_DC6DG7:DC3DG4_BB 6 0.705 -1.530 26.607 -1.437 1.825 3.197 37.098 A A 7 8 3.392 B B 3 2 3.247 2.155 -0.259 -0.387 AA_DG7DA8:DT2DC3_BB 7 2.493 -3.923 36.957 -0.893 0.736 3.196 38.338 A A 8 9 7.384 B B 2 1 3.325 4.837 0.361 -0.851 AA_DA8DG9:DC1DT2_BB 8 -0.147 0.224 38.043 -1.901 -0.567 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list struct_conn struct_site chem_comp_atom chem_comp_bond entity pdbx_entity_src_syn repository Initial release Version format compliance Version format compliance Database references Derived calculations Other Data collection Source and taxonomy Structure summary 1 0 1995-12-07 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-16 1 4 2024-03-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_conn.pdbx_leaving_atom_flag _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _entity.details Y BNL 1995-09-01 REL REL BAP 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE chemically synthesized sample chemically synthesized sample (+)-(7R,8S,9S,10R)-7,8-DIHYDROXY-9,10-EPOXY-7,8,9,10- TETRAHYDROBENZO[A]PYRENE IS COVALENTLY BONDED TO THE EXOCYCLIC N6 AMINO GROUP OF DEOXYADENOSINE IN THE CENTER OF THE DUPLEX THROUGH TRANS ADDITION AT THE C10 OF THE EPOXIDE. 1 TWO STARTING STRUCTURES WITH BENZO[A]PYRENE MOIETY INSIDE THE DUPLEX AND OUTSIDE THE DUPLEX, RESPECTIVELY, WERE GENERATED BY CONNECTING A STANDARD B-TYPE DNA FRAGMENT WITH A MANUALLY BUILD (+)-DE2-[BAP] FRAGMENT. SOLUTION STRUCTURES FOR THE DUPLEX WERE GENERATED BY RESTRAINTED MOLECULAR DYNAMICS AND RESTRAINTED ENERGY MINIMIZATION USING A SET OF INTER-PROTON DISTANCE RESTRAINTS AND DIHEDRAL ANGLE RESTRAINTS WHICH WERE DERIVED FROM NMR EXPERIMENTS. SOME OF STRUCTURES WITH MINIMUM RESTRAINT VIOLATIONS WERE FURTHER REFINED BY THE ITERATIVE RELAXATION MATRIX ANALYSIS (IRMA) METHOD OVER 111 WELL-SEPARATED CROSS PEAKS IN NOESY SPECTRA RECORDED IN D2O AND MIXING TIMES OF 50, 80, 120, 160 AND 200 MS. THE STRUCTURE PRESENTED HERE WAS ONE OF THE FIVE REFINED AND MINIMIZED STRUCTURES. THE FOLLOWING RESTRAINTS WERE APPLIED IN THE MOLECULAR DYNAMICS/ENERGY MINIMIZATION CALCULATIONS. THESE WERE; (1) INTER-PROTON DISTANCE RESTRAINTS DIRECTLY DERIVED FROM NOE DATA; (2) BACKBONE DIHEDRAL ANGLE RESTRAINTS FOR A STANDARD B-DNA EXCEPT THOSE IMMEDIATELY ADJACENT TO THE MODIFIED RESIDUE; (3) DIHEDRAL ANGLE RESTRAINTS FOR ALL GLYCOSIDIC BONDS, EXCEPT MODIFIED DA RESIDUE IN THE CENTER; (4) HYDROGEN BOND RESTRAINTS (BOTH DISTANCE AND PLANARITY ) FOR ALL BASE-PAIRS EXCEPT CENTRAL DA-DG MISMATCH PAIR. THESE RESTRAINTS WERE JUSTIFIED BY THE FACT THAT THE MODIFIED DUPLEX DISPLAYED CHARACTERISTIC NMR SPECTRA OF A B-DNA EXCEPT NEAR LESION SITE, WHERE THE BAP MOIETY WAS INTERCALATED. THE MODIFIED DA RESIDUE DISPLAYED C3'-ENDO SUGAR RING AND A SYN GLYCOSIDIC BOND. IT ALSO FORMED A NON-WATSON-CRICK BASE PAIR WITH THE OPPOSITE DG. ENERGY MINIMIZATION, MOLECULAR DYNAMICS BIOSYM refinement NMRCHITECT BAP 1 3 BAP BAP 10 A G 1 n 1 DG 1 A G 2 n 2 DG 2 A T 3 n 3 DT 3 A C 4 n 4 DC 4 A A 5 n 5 DA 5 A C 6 n 6 DC 6 A G 7 n 7 DG 7 A A 8 n 8 DA 8 A G 9 n 9 DG 9 A C 1 n 1 DC 1 B T 2 n 2 DT 2 B C 3 n 3 DC 3 B G 4 n 4 DG 4 B G 5 n 5 DG 5 B G 6 n 6 DG 6 B A 7 n 7 DA 7 B C 8 n 8 DC 8 B C 9 n 9 DC 9 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A DG 2 0.096 SIDE CHAIN 1 A DT 3 0.132 SIDE CHAIN 1 A DA 5 0.082 SIDE CHAIN 1 A DA 8 0.072 SIDE CHAIN 1 B DT 2 0.115 SIDE CHAIN 1 2.49 0.30 108.30 110.79 A A A O4' C1' N9 DG DG DG 1 1 1 N 1 4.22 0.30 108.30 112.52 A A A O4' C1' N9 DG DG DG 2 2 2 N 1 -6.04 0.80 102.40 96.36 A A A C3' C2' C1' DA DA DA 5 5 5 N 1 4.22 0.30 108.30 112.52 A A A O4' C1' N9 DA DA DA 5 5 5 N 1 4.26 0.30 108.30 112.56 A A A O4' C1' N1 DC DC DC 6 6 6 N 1 2.06 0.30 108.30 110.36 A A A O4' C1' N9 DA DA DA 8 8 8 N 1 3.87 0.30 108.30 112.17 A A A O4' C1' N9 DG DG DG 9 9 9 N 1 -5.12 0.80 102.40 97.28 B B B C3' C2' C1' DC DC DC 1 1 1 N 1 5.17 0.30 108.30 113.47 B B B O4' C1' N1 DC DC DC 1 1 1 N 1 2.92 0.30 108.30 111.22 B B B O4' C1' N1 DC DC DC 3 3 3 N 1 1.94 0.30 108.30 110.24 B B B O4' C1' N9 DG DG DG 4 4 4 N 1 3.37 0.30 108.30 111.67 B B B O4' C1' N9 DG DG DG 5 5 5 N 1 3.36 0.30 108.30 111.67 B B B O4' C1' N9 DG DG DG 6 6 6 N 1 2.91 0.30 108.30 111.21 B B B O4' C1' N9 DA DA DA 7 7 7 N 1 2.37 0.30 108.30 110.67 B B B O4' C1' N1 DC DC DC 8 8 8 N 1 2.29 0.30 108.30 110.59 B B B O4' C1' N1 DC DC DC 9 9 9 N BENZO[A]PYRENE DIOL EPOXIDE ADDUCT OF DA IN DUPLEX DNA 1 N N 2 N N 3 N N covale 1.470 none A DA 5 A N6 DA 5 1_555 A BAP 10 C C4' BAP 1_555 hydrog WATSON-CRICK A DG 1 A N1 DG 1 1_555 B DC 9 B N3 DC 9 1_555 hydrog WATSON-CRICK A DG 1 A N2 DG 1 1_555 B DC 9 B O2 DC 9 1_555 hydrog WATSON-CRICK A DG 1 A O6 DG 1 1_555 B DC 9 B N4 DC 9 1_555 hydrog WATSON-CRICK A DG 2 A N1 DG 2 1_555 B DC 8 B N3 DC 8 1_555 hydrog WATSON-CRICK A DG 2 A N2 DG 2 1_555 B DC 8 B O2 DC 8 1_555 hydrog WATSON-CRICK A DG 2 A O6 DG 2 1_555 B DC 8 B N4 DC 8 1_555 hydrog WATSON-CRICK A DT 3 A N3 DT 3 1_555 B DA 7 B N1 DA 7 1_555 hydrog WATSON-CRICK A DT 3 A O4 DT 3 1_555 B DA 7 B N6 DA 7 1_555 hydrog WATSON-CRICK A DC 4 A N3 DC 4 1_555 B DG 6 B N1 DG 6 1_555 hydrog WATSON-CRICK A DC 4 A N4 DC 4 1_555 B DG 6 B O6 DG 6 1_555 hydrog WATSON-CRICK A DC 4 A O2 DC 4 1_555 B DG 6 B N2 DG 6 1_555 hydrog TYPE_9_PAIR A DA 5 A N6 DA 5 1_555 B DG 5 B O6 DG 5 1_555 hydrog TYPE_9_PAIR A DA 5 A N7 DA 5 1_555 B DG 5 B N1 DG 5 1_555 hydrog WATSON-CRICK A DC 6 A N3 DC 6 1_555 B DG 4 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 6 A N4 DC 6 1_555 B DG 4 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 6 A O2 DC 6 1_555 B DG 4 B N2 DG 4 1_555 hydrog WATSON-CRICK A DG 7 A N1 DG 7 1_555 B DC 3 B N3 DC 3 1_555 hydrog WATSON-CRICK A DG 7 A N2 DG 7 1_555 B DC 3 B O2 DC 3 1_555 hydrog WATSON-CRICK A DG 7 A O6 DG 7 1_555 B DC 3 B N4 DC 3 1_555 hydrog WATSON-CRICK A DA 8 A N1 DA 8 1_555 B DT 2 B N3 DT 2 1_555 hydrog WATSON-CRICK A DA 8 A N6 DA 8 1_555 B DT 2 B O4 DT 2 1_555 hydrog WATSON-CRICK A DG 9 A N1 DG 9 1_555 B DC 1 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 9 A N2 DG 9 1_555 B DC 1 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 9 A O6 DG 9 1_555 B DC 1 B N4 DC 1 1_555 DNA DOUBLE HELIX, BENZO[A]PYRENE DIOL EPOXIDE ADDUCT, DUPLEX DNA, NON-WATSON-CRICK BASE PAIR, DNA 1DXA PDB 1 1DXA 1DXA PDB 2 1DXA 1 9 1DXA 1 9 1DXA A 1 1 9 1 9 1DXA 1 9 1DXA B 2 1 9 BINDING SITE FOR RESIDUE BAP A 10 A BAP 10 Software 4 A DA 5 A DA 5 4 1_555 A DC 6 A DC 6 4 1_555 B DG 4 B DG 4 4 1_555 B DG 5 B DG 5 4 1_555 1 P 1