0.017727 0.010235 0.000000 0.000000 0.020470 0.000000 0.000000 0.000000 0.007398 0.00000 0.00000 0.00000 Faure, M. Cohen-Addad, C. Neuburger, M. Douce, R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 56.410 56.410 135.170 C3 H7 N O2 89.093 y ALANINE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C8 H16 O2 S2 208.341 DIHYDROLIPOIC ACID non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N O N 21 N N N 22 N O N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N N N 32 S C N 33 N C N 34 N O N 35 N C N 36 N C N 37 N O N 38 N O N 39 N O N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N N N 48 R C N 49 N C N 50 N O N 51 N C N 52 N S N 53 N O N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N N N 62 S C N 63 N C N 64 N O N 65 N C N 66 N C N 67 N C N 68 N O N 69 N N N 70 N O N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N N N 82 S C N 83 N C N 84 N O N 85 N C N 86 N C N 87 N C N 88 N O N 89 N O N 90 N O N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N N N 101 N C N 102 N C N 103 N O N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N N N 111 S C N 112 N C N 113 N O N 114 N C Y 115 N C Y 116 N N Y 117 N C Y 118 N C Y 119 N N N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N O N 132 N H N 133 N H N 134 N N N 135 S C N 136 N C N 137 N O N 138 S C N 139 N C N 140 N C N 141 N C N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N N N 157 S C N 158 N C N 159 N O N 160 N C N 161 N C N 162 N C N 163 N C N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N N N 179 S C N 180 N C N 181 N O N 182 N C N 183 N C N 184 N C N 185 N C N 186 N N N 187 N O N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N N N 204 S C N 205 N C N 206 N O N 207 N C N 208 N C N 209 N S N 210 N C N 211 N O N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N N N 224 S C N 225 N C N 226 N O N 227 N C Y 228 N C Y 229 N C Y 230 N C Y 231 N C Y 232 N C Y 233 N C N 234 N O N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N N N 247 S C N 248 N C N 249 N O N 250 N C N 251 N C N 252 N C N 253 N O N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N C N 264 N O N 265 N O N 266 N C N 267 N C N 268 N C N 269 N C N 270 R C N 271 N C N 272 N C N 273 N S N 274 N S N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N O N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 R C N 310 N O N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N N Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C N 360 N O N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N doub N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N doub N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N doub N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N doub N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N doub N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing Y 114 N sing Y 115 N doub Y 116 N doub N 117 N sing Y 118 N sing N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N sing Y 222 N doub Y 223 N sing Y 224 N sing N 225 N sing Y 226 N doub N 227 N sing Y 228 N doub N 229 N sing Y 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N doub N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N doub N 314 N sing N 315 N sing N 316 N sing N 317 N sing Y 318 N doub Y 319 N sing Y 320 N sing N 321 N sing Y 322 N doub Y 323 N sing Y 324 N sing N 325 N sing Y 326 N sing Y 327 N doub N 328 N sing Y 329 N doub N 330 N sing Y 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing Y 346 N doub Y 347 N sing Y 348 N sing N 349 N sing Y 350 N doub N 351 N sing Y 352 N doub N 353 N sing Y 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N doub N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing IX Eur.J.Biochem. EJBCAI 0262 0014-2956 267 2890 10.1046/J.1432-1033.2000.01330.X 10806386 Interaction between the Lipoamide-Containing H-Protein and the Lipoamide Dehydrogenase (L-Protein) of the Glycine Decarboxylase Multienzyme System. 2. Crystal Structure of H- and L-Proteins 2000 FR Biochimie BICMBE 0466 0300-9084 79 637 10.1016/S0300-9084(97)83496-7 9479445 Structural Studies of the Glycine Decarboxylase Complex from Pea Leaf Mitochondria 1997 US Nat.Struct.Biol. NSBIEW 2024 1072-8368 2 63 10.1038/NSB0195-63 7719855 The Lipoamide Arm in the Glycine Decarboxylase is not Freely Swinging 1995 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 D51 1041 10.1107/S0907444995006421 15299773 Refined Structures at 2 and 2.2 A Resolution of Two Forms of the H-Protein, a Lipoamide-Containing Protein of the Glycine Decarboxylase Complex 1995 10.2210/pdb1dxm/pdb pdb_00001dxm 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 MIRRORS IMAGE PLATE 1998-12-15 SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE 13962.464 H PROTEIN 2 man polymer 208.341 DIHYDROLIPOIC ACID 2 syn non-polymer 18.015 water 145 nat water GLYCINE CLEAVAGE SYSTEM H PROTEIN no no SNVLDGLKYAPSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVN TGLTGKPGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH SNVLDGLKYAPSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVN TGLTGKPGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n GARDEN PEA sample 3888 LEAF MITOCHONDRIA PISUM SATIVUM CYTOPLASM 469008 ESCHERICHIA COLI BL21(DE3) PET-HM 1 2.22 44.67 5.20 50 % AMMONIUM SULFATE, 100 MM TRIS MALEATE PH 5.2, 2 MM TCEP (TRIS CARBOXYETHYL PHOSPHINE) chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2000-07-04 1 1 2011-05-07 1 2 2011-07-13 1 3 2023-12-06 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id H PROTEIN OF THE GLYCINE CLEAVAGE SYSTEM, AMINOMETHYLTRANSFERASE (E.C.1.4.4.2) FROM GARDEN PEA (PISUM SATIVUM) H-PROTEIN (E.C.1.4.4.2) COMPLEXED WITH LIPOIC ACID CHARGED IN METHYLAMINE FROM PEA (PISUM SATIVUM) PDBE Y PDBE 2000-01-10 REL RED DIHYDROLIPOIC ACID HOH water 1HPC PDB experimental model RED 163 2 RED RED 163 A RED 163 2 RED RED 163 B HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2024 3 HOH HOH 2024 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A HOH 2033 3 HOH HOH 2033 A HOH 2034 3 HOH HOH 2034 A HOH 2035 3 HOH HOH 2035 A HOH 2036 3 HOH HOH 2036 A HOH 2037 3 HOH HOH 2037 A HOH 2038 3 HOH HOH 2038 A HOH 2039 3 HOH HOH 2039 A HOH 2040 3 HOH HOH 2040 A HOH 2041 3 HOH HOH 2041 A HOH 2042 3 HOH HOH 2042 A HOH 2043 3 HOH HOH 2043 A HOH 2044 3 HOH HOH 2044 A HOH 2045 3 HOH HOH 2045 A HOH 2046 3 HOH HOH 2046 A HOH 2047 3 HOH HOH 2047 A HOH 2048 3 HOH HOH 2048 A HOH 2049 3 HOH HOH 2049 A HOH 2050 3 HOH HOH 2050 A HOH 2051 3 HOH HOH 2051 A HOH 2052 3 HOH HOH 2052 A HOH 2053 3 HOH HOH 2053 A HOH 2054 3 HOH HOH 2054 A HOH 2055 3 HOH HOH 2055 A HOH 2056 3 HOH HOH 2056 A HOH 2057 3 HOH HOH 2057 A HOH 2058 3 HOH HOH 2058 A HOH 2059 3 HOH HOH 2059 A HOH 2060 3 HOH HOH 2060 A HOH 2061 3 HOH HOH 2061 A HOH 2001 3 HOH HOH 2001 B HOH 2002 3 HOH HOH 2002 B HOH 2003 3 HOH HOH 2003 B HOH 2004 3 HOH HOH 2004 B HOH 2005 3 HOH HOH 2005 B HOH 2006 3 HOH HOH 2006 B HOH 2007 3 HOH HOH 2007 B HOH 2008 3 HOH HOH 2008 B HOH 2009 3 HOH HOH 2009 B HOH 2010 3 HOH HOH 2010 B HOH 2011 3 HOH HOH 2011 B HOH 2012 3 HOH HOH 2012 B HOH 2013 3 HOH HOH 2013 B HOH 2014 3 HOH HOH 2014 B HOH 2015 3 HOH HOH 2015 B HOH 2016 3 HOH HOH 2016 B HOH 2017 3 HOH HOH 2017 B HOH 2018 3 HOH HOH 2018 B HOH 2019 3 HOH HOH 2019 B HOH 2020 3 HOH HOH 2020 B HOH 2021 3 HOH HOH 2021 B HOH 2022 3 HOH HOH 2022 B HOH 2023 3 HOH HOH 2023 B HOH 2024 3 HOH HOH 2024 B HOH 2025 3 HOH HOH 2025 B HOH 2026 3 HOH HOH 2026 B HOH 2027 3 HOH HOH 2027 B HOH 2028 3 HOH HOH 2028 B HOH 2029 3 HOH HOH 2029 B HOH 2030 3 HOH HOH 2030 B HOH 2031 3 HOH HOH 2031 B HOH 2032 3 HOH HOH 2032 B HOH 2033 3 HOH HOH 2033 B HOH 2034 3 HOH HOH 2034 B HOH 2035 3 HOH HOH 2035 B HOH 2036 3 HOH HOH 2036 B HOH 2037 3 HOH HOH 2037 B HOH 2038 3 HOH HOH 2038 B HOH 2039 3 HOH HOH 2039 B HOH 2040 3 HOH HOH 2040 B HOH 2041 3 HOH HOH 2041 B HOH 2042 3 HOH HOH 2042 B HOH 2043 3 HOH HOH 2043 B HOH 2044 3 HOH HOH 2044 B HOH 2045 3 HOH HOH 2045 B HOH 2046 3 HOH HOH 2046 B HOH 2047 3 HOH HOH 2047 B HOH 2048 3 HOH HOH 2048 B HOH 2049 3 HOH HOH 2049 B HOH 2050 3 HOH HOH 2050 B HOH 2051 3 HOH HOH 2051 B HOH 2052 3 HOH HOH 2052 B HOH 2053 3 HOH HOH 2053 B HOH 2054 3 HOH HOH 2054 B HOH 2055 3 HOH HOH 2055 B HOH 2056 3 HOH HOH 2056 B HOH 2057 3 HOH HOH 2057 B HOH 2058 3 HOH HOH 2058 B HOH 2059 3 HOH HOH 2059 B HOH 2060 3 HOH HOH 2060 B HOH 2061 3 HOH HOH 2061 B HOH 2062 3 HOH HOH 2062 B HOH 2063 3 HOH HOH 2063 B HOH 2064 3 HOH HOH 2064 B HOH 2065 3 HOH HOH 2065 B HOH 2066 3 HOH HOH 2066 B HOH 2067 3 HOH HOH 2067 B HOH 2068 3 HOH HOH 2068 B HOH 2069 3 HOH HOH 2069 B HOH 2070 3 HOH HOH 2070 B HOH 2071 3 HOH HOH 2071 B HOH 2072 3 HOH HOH 2072 B HOH 2073 3 HOH HOH 2073 B HOH 2074 3 HOH HOH 2074 B HOH 2075 3 HOH HOH 2075 B HOH 2076 3 HOH HOH 2076 B HOH 2077 3 HOH HOH 2077 B HOH 2078 3 HOH HOH 2078 B HOH 2079 3 HOH HOH 2079 B HOH 2080 3 HOH HOH 2080 B HOH 2081 3 HOH HOH 2081 B HOH 2082 3 HOH HOH 2082 B HOH 2083 3 HOH HOH 2083 B HOH 2084 3 HOH HOH 2084 B SER 1 n 1 SER 1 A ASN 2 n 2 ASN 2 A VAL 3 n 3 VAL 3 A LEU 4 n 4 LEU 4 A ASP 5 n 5 ASP 5 A GLY 6 n 6 GLY 6 A LEU 7 n 7 LEU 7 A LYS 8 n 8 LYS 8 A TYR 9 n 9 TYR 9 A ALA 10 n 10 ALA 10 A PRO 11 n 11 PRO 11 A SER 12 n 12 SER 12 A HIS 13 n 13 HIS 13 A GLU 14 n 14 GLU 14 A TRP 15 n 15 TRP 15 A VAL 16 n 16 VAL 16 A LYS 17 n 17 LYS 17 A HIS 18 n 18 HIS 18 A GLU 19 n 19 GLU 19 A GLY 20 n 20 GLY 20 A SER 21 n 21 SER 21 A VAL 22 n 22 VAL 22 A ALA 23 n 23 ALA 23 A THR 24 n 24 THR 24 A ILE 25 n 25 ILE 25 A GLY 26 n 26 GLY 26 A ILE 27 n 27 ILE 27 A THR 28 n 28 THR 28 A ASP 29 n 29 ASP 29 A HIS 30 n 30 HIS 30 A ALA 31 n 31 ALA 31 A GLN 32 n 32 GLN 32 A ASP 33 n 33 ASP 33 A HIS 34 n 34 HIS 34 A LEU 35 n 35 LEU 35 A GLY 36 n 36 GLY 36 A GLU 37 n 37 GLU 37 A VAL 38 n 38 VAL 38 A VAL 39 n 39 VAL 39 A PHE 40 n 40 PHE 40 A VAL 41 n 41 VAL 41 A GLU 42 n 42 GLU 42 A LEU 43 n 43 LEU 43 A PRO 44 n 44 PRO 44 A GLU 45 n 45 GLU 45 A PRO 46 n 46 PRO 46 A GLY 47 n 47 GLY 47 A VAL 48 n 48 VAL 48 A SER 49 n 49 SER 49 A VAL 50 n 50 VAL 50 A THR 51 n 51 THR 51 A LYS 52 n 52 LYS 52 A GLY 53 n 53 GLY 53 A LYS 54 n 54 LYS 54 A GLY 55 n 55 GLY 55 A PHE 56 n 56 PHE 56 A GLY 57 n 57 GLY 57 A ALA 58 n 58 ALA 58 A VAL 59 n 59 VAL 59 A GLU 60 n 60 GLU 60 A SER 61 n 61 SER 61 A VAL 62 n 62 VAL 62 A LYS 63 n 63 LYS 63 A ALA 64 n 64 ALA 64 A THR 65 n 65 THR 65 A SER 66 n 66 SER 66 A ASP 67 n 67 ASP 67 A VAL 68 n 68 VAL 68 A ASN 69 n 69 ASN 69 A SER 70 n 70 SER 70 A PRO 71 n 71 PRO 71 A ILE 72 n 72 ILE 72 A SER 73 n 73 SER 73 A GLY 74 n 74 GLY 74 A GLU 75 n 75 GLU 75 A VAL 76 n 76 VAL 76 A ILE 77 n 77 ILE 77 A GLU 78 n 78 GLU 78 A VAL 79 n 79 VAL 79 A ASN 80 n 80 ASN 80 A THR 81 n 81 THR 81 A GLY 82 n 82 GLY 82 A LEU 83 n 83 LEU 83 A THR 84 n 84 THR 84 A GLY 85 n 85 GLY 85 A LYS 86 n 86 LYS 86 A PRO 87 n 87 PRO 87 A GLY 88 n 88 GLY 88 A LEU 89 n 89 LEU 89 A ILE 90 n 90 ILE 90 A ASN 91 n 91 ASN 91 A SER 92 n 92 SER 92 A SER 93 n 93 SER 93 A PRO 94 n 94 PRO 94 A TYR 95 n 95 TYR 95 A GLU 96 n 96 GLU 96 A ASP 97 n 97 ASP 97 A GLY 98 n 98 GLY 98 A TRP 99 n 99 TRP 99 A MET 100 n 100 MET 100 A ILE 101 n 101 ILE 101 A LYS 102 n 102 LYS 102 A ILE 103 n 103 ILE 103 A LYS 104 n 104 LYS 104 A PRO 105 n 105 PRO 105 A THR 106 n 106 THR 106 A SER 107 n 107 SER 107 A PRO 108 n 108 PRO 108 A ASP 109 n 109 ASP 109 A GLU 110 n 110 GLU 110 A LEU 111 n 111 LEU 111 A GLU 112 n 112 GLU 112 A SER 113 n 113 SER 113 A LEU 114 n 114 LEU 114 A LEU 115 n 115 LEU 115 A GLY 116 n 116 GLY 116 A ALA 117 n 117 ALA 117 A LYS 118 n 118 LYS 118 A GLU 119 n 119 GLU 119 A TYR 120 n 120 TYR 120 A THR 121 n 121 THR 121 A LYS 122 n 122 LYS 122 A PHE 123 n 123 PHE 123 A CYS 124 n 124 CYS 124 A GLU 125 n 125 GLU 125 A GLU 126 n 126 GLU 126 A GLU 127 n 127 GLU 127 A ASP 128 n 128 ASP 128 A ALA 129 n 129 ALA 129 A ALA 130 n 130 ALA 130 A HIS 131 n 131 HIS 131 A SER 1 n 1 SER 1 B ASN 2 n 2 ASN 2 B VAL 3 n 3 VAL 3 B LEU 4 n 4 LEU 4 B ASP 5 n 5 ASP 5 B GLY 6 n 6 GLY 6 B LEU 7 n 7 LEU 7 B LYS 8 n 8 LYS 8 B TYR 9 n 9 TYR 9 B ALA 10 n 10 ALA 10 B PRO 11 n 11 PRO 11 B SER 12 n 12 SER 12 B HIS 13 n 13 HIS 13 B GLU 14 n 14 GLU 14 B TRP 15 n 15 TRP 15 B VAL 16 n 16 VAL 16 B LYS 17 n 17 LYS 17 B HIS 18 n 18 HIS 18 B GLU 19 n 19 GLU 19 B GLY 20 n 20 GLY 20 B SER 21 n 21 SER 21 B VAL 22 n 22 VAL 22 B ALA 23 n 23 ALA 23 B THR 24 n 24 THR 24 B ILE 25 n 25 ILE 25 B GLY 26 n 26 GLY 26 B ILE 27 n 27 ILE 27 B THR 28 n 28 THR 28 B ASP 29 n 29 ASP 29 B HIS 30 n 30 HIS 30 B ALA 31 n 31 ALA 31 B GLN 32 n 32 GLN 32 B ASP 33 n 33 ASP 33 B HIS 34 n 34 HIS 34 B LEU 35 n 35 LEU 35 B GLY 36 n 36 GLY 36 B GLU 37 n 37 GLU 37 B VAL 38 n 38 VAL 38 B VAL 39 n 39 VAL 39 B PHE 40 n 40 PHE 40 B VAL 41 n 41 VAL 41 B GLU 42 n 42 GLU 42 B LEU 43 n 43 LEU 43 B PRO 44 n 44 PRO 44 B GLU 45 n 45 GLU 45 B PRO 46 n 46 PRO 46 B GLY 47 n 47 GLY 47 B VAL 48 n 48 VAL 48 B SER 49 n 49 SER 49 B VAL 50 n 50 VAL 50 B THR 51 n 51 THR 51 B LYS 52 n 52 LYS 52 B GLY 53 n 53 GLY 53 B LYS 54 n 54 LYS 54 B GLY 55 n 55 GLY 55 B PHE 56 n 56 PHE 56 B GLY 57 n 57 GLY 57 B ALA 58 n 58 ALA 58 B VAL 59 n 59 VAL 59 B GLU 60 n 60 GLU 60 B SER 61 n 61 SER 61 B VAL 62 n 62 VAL 62 B LYS 63 n 63 LYS 63 B ALA 64 n 64 ALA 64 B THR 65 n 65 THR 65 B SER 66 n 66 SER 66 B ASP 67 n 67 ASP 67 B VAL 68 n 68 VAL 68 B ASN 69 n 69 ASN 69 B SER 70 n 70 SER 70 B PRO 71 n 71 PRO 71 B ILE 72 n 72 ILE 72 B SER 73 n 73 SER 73 B GLY 74 n 74 GLY 74 B GLU 75 n 75 GLU 75 B VAL 76 n 76 VAL 76 B ILE 77 n 77 ILE 77 B GLU 78 n 78 GLU 78 B VAL 79 n 79 VAL 79 B ASN 80 n 80 ASN 80 B THR 81 n 81 THR 81 B GLY 82 n 82 GLY 82 B LEU 83 n 83 LEU 83 B THR 84 n 84 THR 84 B GLY 85 n 85 GLY 85 B LYS 86 n 86 LYS 86 B PRO 87 n 87 PRO 87 B GLY 88 n 88 GLY 88 B LEU 89 n 89 LEU 89 B ILE 90 n 90 ILE 90 B ASN 91 n 91 ASN 91 B SER 92 n 92 SER 92 B SER 93 n 93 SER 93 B PRO 94 n 94 PRO 94 B TYR 95 n 95 TYR 95 B GLU 96 n 96 GLU 96 B ASP 97 n 97 ASP 97 B GLY 98 n 98 GLY 98 B TRP 99 n 99 TRP 99 B MET 100 n 100 MET 100 B ILE 101 n 101 ILE 101 B LYS 102 n 102 LYS 102 B ILE 103 n 103 ILE 103 B LYS 104 n 104 LYS 104 B PRO 105 n 105 PRO 105 B THR 106 n 106 THR 106 B SER 107 n 107 SER 107 B PRO 108 n 108 PRO 108 B ASP 109 n 109 ASP 109 B GLU 110 n 110 GLU 110 B LEU 111 n 111 LEU 111 B GLU 112 n 112 GLU 112 B SER 113 n 113 SER 113 B LEU 114 n 114 LEU 114 B LEU 115 n 115 LEU 115 B GLY 116 n 116 GLY 116 B ALA 117 n 117 ALA 117 B LYS 118 n 118 LYS 118 B GLU 119 n 119 GLU 119 B TYR 120 n 120 TYR 120 B THR 121 n 121 THR 121 B LYS 122 n 122 LYS 122 B PHE 123 n 123 PHE 123 B CYS 124 n 124 CYS 124 B GLU 125 n 125 GLU 125 B GLU 126 n 126 GLU 126 B GLU 127 n 127 GLU 127 B ASP 128 n 128 ASP 128 B ALA 129 n 129 ALA 129 B ALA 130 n 130 ALA 130 B HIS 131 n 131 HIS 131 B software_defined_assembly PQS 1 monomeric software_defined_assembly PQS 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O TRP 15 A O TRP 15 A N GLY 26 A N GLY 26 A O ALA 23 A O ALA 23 A N ILE 103 A N ILE 103 A O LYS 102 A O LYS 102 A N GLU 78 A N GLU 78 A O VAL 39 A O VAL 39 A N GLU 60 A N GLU 60 A O PHE 56 A O PHE 56 A N VAL 68 A N VAL 68 B O LYS 8 B O LYS 8 B N VAL 16 B N VAL 16 B O TRP 15 B O TRP 15 B N GLY 26 B N GLY 26 B O ALA 23 B O ALA 23 B N ILE 103 B N ILE 103 B O LYS 102 B O LYS 102 B N GLU 78 B N GLU 78 B O VAL 39 B O VAL 39 B N GLU 60 B N GLU 60 B O PHE 56 B O PHE 56 B N VAL 68 B N VAL 68 1 A LYS 86 -119.78 76.51 1 A GLU 96 -106.73 -80.02 1 A ASP 109 -57.90 -9.86 1 A ALA 130 -75.13 30.28 1 B HIS 13 72.18 36.03 1 B PRO 44 -77.40 -164.42 1 B ALA 58 -176.09 139.25 1 B GLU 96 -107.63 -83.76 PARHCSDX.PRO TOPHCSDX.PRO 37.9 3.41 -2.07 0.00 3.41 0.00 -6.82 BULK SOLVENT MODEL USED 0.260 0.013 0.204 0.204 2.60 40.00 410 7740 5.3 94.8 RANDOM 1374190.82 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT 1HPC FLAT MODEL 48 0.358993 0.43 0.30 5.00 0.63 0.38 2.60 40.00 145 2133 22 0 1966 0.007 1.3 25.0 1.17 1.43 1.50 2.44 2.00 1.98 2.00 3.09 2.50 0.360 0.046 0.283 2.76 60 1217 6 4.7 96.4 47.6 2.600 40.000 1DXM 7808 0.000 0.11000 1 4.7000 3.000 97.1 2.60 2.74 3.000 0.24000 1 2.90 98.3 refinement CNS 0.5 data reduction XDS data scaling SCALA phasing CNS 0.5 Reduced form of the H protein from glycine decarboxylase complex 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N BIOLOGICAL_UNIT: MONOMERTHE GLYCINE CLEAVAGE SYSTEM IS COMPOSED OF FOUR PROTEINS:P, T, L, AND H. THE H CHAIN WAS STUDIED HERE. THIS COMPONENTSHUTTLES THE METHYLAMINE GROUP OF GLYCINE FROM THE P PROTEINTO THE T PROTEIN. THE H CHAIN CONTAINS A COVALENTLY-BOUNDLIPOYL COFACTOR. A THR 28 A THR 28 HELX_P A GLY 36 A GLY 36 1 1 9 A THR 81 A THR 81 HELX_P A LYS 86 A LYS 86 1 2 6 A GLY 88 A GLY 88 HELX_P A SER 93 A SER 93 1 3 6 A SER 107 A SER 107 HELX_P A SER 113 A SER 113 5 4 7 A GLY 116 A GLY 116 HELX_P A ALA 130 A ALA 130 1 5 15 B THR 28 B THR 28 HELX_P B GLY 36 B GLY 36 1 6 9 B THR 81 B THR 81 HELX_P B THR 84 B THR 84 5 7 4 B GLY 88 B GLY 88 HELX_P B SER 93 B SER 93 1 8 6 B SER 107 B SER 107 HELX_P B SER 113 B SER 113 5 9 7 B GLY 116 B GLY 116 HELX_P B ALA 129 B ALA 129 1 10 14 covale 1.351 one A LYS 63 A NZ LYS 63 1_555 A RED 163 C C1 RED 1_555 covale 1.346 one B LYS 63 B NZ LYS 63 1_555 B RED 163 D C1 RED 1_555 OXIDOREDUCTASES(ACTING ON CH-NH2 DONOR) OXIDOREDUCTASES(ACTING ON CH-NH2 DONOR), GLYCINE DECARBOXYLASE, MITOCHONDRIA given 0.394430 0.547610 0.737940 0.913690 -0.319300 -0.251430 0.097940 0.773420 -0.626290 -0.16918 -0.57433 0.15324 GCSH_PEA UNP 1 P16048 35 165 1DXM 1 131 P16048 A 1 1 131 35 165 1DXM 1 131 P16048 B 1 1 131 4 3 5 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 14 A GLU 14 A GLU 19 A GLU 19 A VAL 22 A VAL 22 A ILE 27 A ILE 27 A ILE 101 A ILE 101 A PRO 105 A PRO 105 A GLY 74 A GLY 74 A VAL 79 A VAL 79 A VAL 38 A VAL 38 A GLU 42 A GLU 42 A GLY 55 A GLY 55 A SER 61 A SER 61 A THR 65 A THR 65 A ASN 69 A ASN 69 B LYS 8 B LYS 8 B ALA 10 B ALA 10 B GLU 14 B GLU 14 B GLU 19 B GLU 19 B VAL 22 B VAL 22 B ILE 27 B ILE 27 B ILE 101 B ILE 101 B PRO 105 B PRO 105 B GLY 74 B GLY 74 B VAL 79 B VAL 79 B VAL 38 B VAL 38 B GLU 42 B GLU 42 B GLY 55 B GLY 55 B SER 61 B SER 61 B THR 65 B THR 65 B ASN 69 B ASN 69 BINDING SITE FOR RESIDUE RED A 163 A RED 163 Software 4 BINDING SITE FOR RESIDUE RED B 163 B RED 163 Software 6 A HIS 34 A HIS 34 4 1_555 A LEU 35 A LEU 35 4 1_555 A LYS 63 A LYS 63 4 1_555 A GLU 127 A GLU 127 4 1_555 A SER 21 A SER 21 6 1_555 A VAL 22 A VAL 22 6 1_555 A GLU 78 A GLU 78 6 1_555 A LYS 102 A LYS 102 6 1_555 B HIS 34 B HIS 34 6 1_555 B LYS 63 B LYS 63 6 1_555 152 P 31 2 1