1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Hsu, S.-T.
Chou, M.-T.
Cheng, J.-W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
Y
20
N
N
Y
21
N
C
Y
22
N
N
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
O
N
39
N
P
N
40
N
O
N
41
N
O
N
42
N
O
N
43
N
C
N
44
R
C
N
45
N
O
N
46
S
C
N
47
N
O
N
48
N
C
N
49
R
C
N
50
N
N
N
51
N
C
N
52
N
O
N
53
N
N
N
54
N
C
N
55
N
N
N
56
N
C
N
57
N
C
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
O
N
73
N
P
N
74
N
O
N
75
N
O
N
76
N
O
N
77
N
C
N
78
R
C
N
79
N
O
N
80
S
C
N
81
N
O
N
82
N
C
N
83
R
C
Y
84
N
N
Y
85
N
C
Y
86
N
N
Y
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
C
N
92
N
N
N
93
N
N
Y
94
N
C
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
O
N
110
N
P
N
111
N
O
N
112
N
O
N
113
N
O
N
114
N
C
N
115
R
C
N
116
N
O
N
117
S
C
N
118
N
O
N
119
N
C
N
120
R
C
N
121
N
N
N
122
N
C
N
123
N
O
N
124
N
N
N
125
N
C
N
126
N
O
N
127
N
C
N
128
N
C
N
129
N
C
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
Y
30
N
sing
Y
31
N
doub
N
32
N
sing
Y
33
N
doub
N
34
N
sing
N
35
N
sing
Y
36
N
sing
Y
37
N
doub
N
38
N
sing
Y
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
doub
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
doub
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
Y
98
N
sing
Y
99
N
sing
Y
100
N
doub
N
101
N
sing
Y
102
N
sing
N
103
N
sing
Y
104
N
doub
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
295
1129
10.1006/JMBI.1999.3388
10653692
Hydration of [D(Cgc)R(Aaa)D(Tttgcg)]2
2000
10.2210/pdb1dxn/pdb
pdb_00001dxn
10.13018/BMR4618
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
3710.401
DNA/RNA (5'-D(*CP*GP*CP)-R(*AP*AP*AP)-D(*TP*TP*TP*GP*CP*G)-3')
2
syn
polymer
no
no
(DC)(DG)(DC)AAA(DT)(DT)(DT)(DG)(DC)(DG)
CGCAAATTTGCG
A,B
polydeoxyribonucleotide/polyribonucleotide hybrid
n
n
n
n
n
n
n
n
n
n
n
n
15.758
1
19
A
1
B
24
-0.681
A_DC1:DG24_B
1
-14.150
0.639
-0.377
-0.383
-8.975
1
19
A
2
B
23
0.300
A_DG2:DC23_B
2
-5.476
-0.653
-0.286
-0.363
-2.482
1
19
A
3
B
22
-1.828
A_DC3:DG22_B
3
-1.194
0.519
0.187
-0.260
-3.240
1
20
A
4
B
21
-0.771
A_A4:DT21_B
4
-13.875
0.220
-0.006
-0.202
5.169
1
20
A
5
B
20
-5.747
A_A5:DT20_B
5
-33.497
0.211
-0.025
-0.241
-4.140
1
20
A
6
B
19
-7.240
A_A6:DT19_B
6
-30.963
0.225
-0.175
-0.205
2.336
1
20
A
7
B
18
-7.654
A_DT7:A18_B
7
-30.316
-0.194
-0.158
-0.200
-6.655
1
20
A
8
B
17
-6.402
A_DT8:A17_B
8
-31.945
-0.204
-0.038
-0.233
3.056
1
20
A
9
B
16
1.999
A_DT9:A16_B
9
-13.937
-0.179
0.027
-0.198
-1.688
1
19
A
10
B
15
-3.016
A_DG10:DC15_B
10
-8.636
-0.481
0.172
-0.283
-1.476
1
19
A
11
B
14
-0.365
A_DC11:DG14_B
11
-6.816
0.478
0.068
-0.326
4.637
1
19
A
12
B
13
-1.107
A_DG12:DC13_B
12
-11.186
-0.413
0.006
-0.329
2.442
30.753
A
A
1
2
24.658
B
B
24
23
3.647
12.702
0.743
-2.241
AA_DC1DG2:DC23DG24_BB
1
0.589
-1.144
28.059
-6.653
-1.289
2.882
38.656
A
A
2
3
9.838
B
B
23
22
2.906
6.455
-1.151
-0.835
AA_DG2DC3:DG22DC23_BB
2
-6.555
9.992
37.586
-1.975
1.015
2.734
24.412
A
A
3
4
10.064
B
B
22
21
3.014
4.233
0.235
-1.422
AA_DC3A4:DT21DG22_BB
3
1.169
-2.780
24.020
-4.534
-0.232
2.890
40.132
A
A
4
5
-7.077
B
B
21
20
2.961
-4.845
-1.116
0.230
AA_A4A5:DT20DT21_BB
4
0.885
-1.292
39.841
0.830
1.716
3.426
34.220
A
A
5
6
2.824
B
B
20
19
3.461
1.661
0.641
-1.091
AA_A5A6:DT19DT20_BB
5
1.227
-2.086
34.159
-2.130
-0.886
2.768
36.405
A
A
6
7
-4.772
B
B
19
18
2.678
-2.978
-0.017
-1.236
AA_A6DT7:A18DT19_BB
6
-0.093
0.149
36.287
-1.633
0.017
3.352
33.343
A
A
7
8
4.434
B
B
18
17
3.427
2.541
-0.719
-1.176
AA_DT7DT8:A17A18_BB
7
-1.111
1.939
33.231
-2.487
1.062
2.852
39.058
A
A
8
9
-4.645
B
B
17
16
2.906
-3.103
1.313
0.323
AA_DT8DT9:A16A17_BB
8
-0.619
0.927
38.935
0.812
-2.029
2.793
25.694
A
A
9
10
10.460
B
B
16
15
3.096
4.627
-0.369
-1.445
AA_DT9DG10:DC15A16_BB
9
-0.094
0.213
25.281
-4.433
0.806
2.903
41.451
A
A
10
11
9.681
B
B
15
14
3.044
6.811
0.677
-0.993
AA_DG10DC11:DG14DC15_BB
10
4.417
-6.278
40.683
-2.070
-0.525
1.384
27.712
A
A
11
12
45.327
B
B
14
13
2.757
19.605
-0.134
-0.821
AA_DC11DG12:DC13DG14_BB
11
1.098
-2.538
19.652
-5.251
0.478
pdbx_database_status
pdbx_nmr_spectrometer
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Other
Data collection
Database references
1
0
2000-04-11
1
1
2011-05-07
1
2
2011-07-13
1
3
2020-01-15
1
4
2024-05-15
_pdbx_database_status.status_code_cs
_pdbx_nmr_spectrometer.model
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
PDBE
Y
PDBE
2000-01-11
REL
REL
RESIDUES 4, 5, 6 IN CHAIN A AND 16, 17, 18 IN CHAIN B ARE
ARE RNA, THE REMAINING RESIDUES ARE ALL DNA
LOWEST ENERGY
10
THE STRUCTURE WAS DETERMINED FROM 2D NMR SPECTROSCOPY WITH UNLABELED SAMPLE
7.0
pH
1
atm
300
K
SA, MD, MATRIX RELAXATION REFINEMENT
100% D2O OR 90% H2O:10% D2O
BRUNGER
refinement
X-PLOR
3.851
structure solution
X-PLOR
600
Bruker
AVANCE
DC
1
n
1
DC
1
A
DG
2
n
2
DG
2
A
DC
3
n
3
DC
3
A
A
4
n
4
A
4
A
A
5
n
5
A
5
A
A
6
n
6
A
6
A
DT
7
n
7
DT
7
A
DT
8
n
8
DT
8
A
DT
9
n
9
DT
9
A
DG
10
n
10
DG
10
A
DC
11
n
11
DC
11
A
DG
12
n
12
DG
12
A
DC
13
n
1
DC
13
B
DG
14
n
2
DG
14
B
DC
15
n
3
DC
15
B
A
16
n
4
A
16
B
A
17
n
5
A
17
B
A
18
n
6
A
18
B
DT
19
n
7
DT
19
B
DT
20
n
8
DT
20
B
DT
21
n
9
DT
21
B
DG
22
n
10
DG
22
B
DC
23
n
11
DC
23
B
DG
24
n
12
DG
24
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
4.07
0.30
108.30
112.37
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
1
-6.29
0.80
105.90
99.61
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
1
3.67
0.30
108.30
111.97
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
4.21
0.60
118.90
123.11
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
1
-6.12
0.70
109.70
103.58
A
A
A
C1'
O4'
C4'
A
A
A
4
4
4
N
1
8.64
0.70
108.50
117.14
A
A
A
O4'
C1'
N9
A
A
A
4
4
4
N
1
6.17
0.70
108.50
114.67
A
A
A
O4'
C1'
N9
A
A
A
6
6
6
N
1
3.09
0.30
108.30
111.39
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
1
-3.99
0.60
122.90
118.91
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
1
-7.10
0.80
105.90
98.80
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
1
3.52
0.30
108.30
111.82
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
1
-5.42
0.80
105.90
100.48
A
A
A
O4'
C1'
C2'
DG
DG
DG
12
12
12
N
1
5.42
0.30
108.30
113.72
A
A
A
O4'
C1'
N9
DG
DG
DG
12
12
12
N
1
-5.85
0.80
105.90
100.05
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
1
4.25
0.30
108.30
112.55
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
1
8.15
1.20
119.70
127.85
B
B
B
C3'
O3'
P
DG
DG
DC
14
14
15
Y
1
4.13
0.60
118.90
123.03
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
1
-5.49
0.70
109.70
104.21
B
B
B
C1'
O4'
C4'
A
A
A
16
16
16
N
1
7.22
0.70
108.50
115.72
B
B
B
O4'
C1'
N9
A
A
A
16
16
16
N
1
6.19
0.70
108.50
114.69
B
B
B
O4'
C1'
N9
A
A
A
18
18
18
N
1
3.01
0.30
108.30
111.31
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
1
-3.84
0.60
122.90
119.06
B
B
B
C6
C5
C7
DT
DT
DT
21
21
21
N
1
-6.72
0.80
105.90
99.18
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
1
3.07
0.30
108.30
111.37
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
1
3.40
0.30
108.30
111.70
B
B
B
O4'
C1'
N1
DC
DC
DC
23
23
23
N
1
3.56
0.30
108.30
111.86
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
2
5.01
0.30
108.30
113.31
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
2
-6.18
0.80
105.90
99.72
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
2
3.56
0.30
108.30
111.86
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
2
8.44
1.20
119.70
128.14
A
A
A
C3'
O3'
P
DG
DG
DC
2
2
3
Y
2
3.73
0.60
118.90
122.63
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
2
-6.15
0.70
109.70
103.55
A
A
A
C1'
O4'
C4'
A
A
A
4
4
4
N
2
8.84
0.70
108.50
117.34
A
A
A
O4'
C1'
N9
A
A
A
4
4
4
N
2
6.24
0.70
108.50
114.74
A
A
A
O4'
C1'
N9
A
A
A
6
6
6
N
2
2.96
0.30
108.30
111.26
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
2
-3.94
0.60
122.90
118.96
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
2
-6.58
0.80
105.90
99.32
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
2
2.56
0.30
108.30
110.86
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
2
3.66
0.60
118.90
122.56
B
B
B
N1
C2
O2
DC
DC
DC
13
13
13
N
2
-6.46
0.80
105.90
99.44
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
2
3.84
0.30
108.30
112.14
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
2
4.12
0.60
118.90
123.02
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
2
-5.85
0.70
109.70
103.85
B
B
B
C1'
O4'
C4'
A
A
A
16
16
16
N
2
7.99
0.70
108.50
116.49
B
B
B
O4'
C1'
N9
A
A
A
16
16
16
N
2
5.91
0.70
108.50
114.41
B
B
B
O4'
C1'
N9
A
A
A
18
18
18
N
2
2.85
0.30
108.30
111.15
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
2
-3.89
0.60
122.90
119.01
B
B
B
C6
C5
C7
DT
DT
DT
21
21
21
N
2
-7.02
0.80
105.90
98.88
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
2
2.94
0.30
108.30
111.24
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
2
2.92
0.30
108.30
111.22
B
B
B
O4'
C1'
N1
DC
DC
DC
23
23
23
N
2
7.87
1.20
119.70
127.57
B
B
B
C3'
O3'
P
DC
DC
DG
23
23
24
Y
3
3.67
0.60
118.90
122.57
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
3
-6.73
0.80
105.90
99.17
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
3
4.39
0.30
108.30
112.69
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
3
4.09
0.60
118.90
122.99
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
3
-5.97
0.70
109.70
103.73
A
A
A
C1'
O4'
C4'
A
A
A
4
4
4
N
3
8.25
0.70
108.50
116.75
A
A
A
O4'
C1'
N9
A
A
A
4
4
4
N
3
5.93
0.70
108.50
114.43
A
A
A
O4'
C1'
N9
A
A
A
6
6
6
N
3
2.81
0.30
108.30
111.11
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
3
-3.89
0.60
122.90
119.01
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
3
-6.93
0.80
105.90
98.97
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
3
3.62
0.30
108.30
111.92
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
3
2.88
0.30
108.30
111.18
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
3
9.46
1.20
119.70
129.16
A
A
A
C3'
O3'
P
DC
DC
DG
11
11
12
Y
3
3.36
0.30
108.30
111.66
B
B
B
O4'
C1'
N1
DC
DC
DC
13
13
13
N
3
-6.40
0.80
105.90
99.50
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
3
2.89
0.30
108.30
111.19
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
3
7.43
1.20
119.70
127.13
B
B
B
C3'
O3'
P
DG
DG
DC
14
14
15
Y
3
3.89
0.60
118.90
122.79
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
3
-6.12
0.70
109.70
103.58
B
B
B
C1'
O4'
C4'
A
A
A
16
16
16
N
3
8.88
0.70
108.50
117.38
B
B
B
O4'
C1'
N9
A
A
A
16
16
16
N
3
6.15
0.70
108.50
114.65
B
B
B
O4'
C1'
N9
A
A
A
18
18
18
N
3
2.99
0.30
108.30
111.29
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
3
-3.83
0.60
122.90
119.07
B
B
B
C6
C5
C7
DT
DT
DT
21
21
21
N
3
-6.61
0.80
105.90
99.29
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
3
3.51
0.30
108.30
111.81
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
4
-6.04
0.80
105.90
99.86
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
4
4.02
0.30
108.30
112.32
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
4
7.57
1.20
119.70
127.27
A
A
A
C3'
O3'
P
DG
DG
DC
2
2
3
Y
4
4.22
0.60
118.90
123.12
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
4
-5.87
0.70
109.70
103.83
A
A
A
C1'
O4'
C4'
A
A
A
4
4
4
N
4
8.23
0.70
108.50
116.73
A
A
A
O4'
C1'
N9
A
A
A
4
4
4
N
4
6.22
0.70
108.50
114.72
A
A
A
O4'
C1'
N9
A
A
A
6
6
6
N
4
2.82
0.30
108.30
111.12
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
4
-3.78
0.60
122.90
119.12
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
4
-6.78
0.80
105.90
99.12
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
4
3.20
0.30
108.30
111.50
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
4
3.23
0.30
108.30
111.53
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
4
2.80
0.30
108.30
111.10
A
A
A
O4'
C1'
N9
DG
DG
DG
12
12
12
N
4
4.70
0.30
108.30
113.00
B
B
B
O4'
C1'
N1
DC
DC
DC
13
13
13
N
4
-5.88
0.80
105.90
100.02
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
4
3.65
0.30
108.30
111.95
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
4
4.22
0.60
118.90
123.12
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
4
-6.01
0.70
109.70
103.69
B
B
B
C1'
O4'
C4'
A
A
A
16
16
16
N
4
8.29
0.70
108.50
116.79
B
B
B
O4'
C1'
N9
A
A
A
16
16
16
N
4
6.34
0.70
108.50
114.84
B
B
B
O4'
C1'
N9
A
A
A
18
18
18
N
4
2.71
0.30
108.30
111.01
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
4
-3.88
0.60
122.90
119.02
B
B
B
C6
C5
C7
DT
DT
DT
21
21
21
N
4
-6.75
0.80
105.90
99.15
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
4
3.10
0.30
108.30
111.40
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
4
-4.82
0.80
105.90
101.08
B
B
B
O4'
C1'
C2'
DG
DG
DG
24
24
24
N
4
6.40
0.30
108.30
114.70
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
5
3.72
0.60
118.90
122.62
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
5
-6.95
0.80
105.90
98.95
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
5
5.02
0.30
108.30
113.32
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
5
4.15
0.60
118.90
123.05
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
5
-5.92
0.70
109.70
103.78
A
A
A
C1'
O4'
C4'
A
A
A
4
4
4
N
5
8.55
0.70
108.50
117.05
A
A
A
O4'
C1'
N9
A
A
A
4
4
4
N
5
6.09
0.70
108.50
114.59
A
A
A
O4'
C1'
N9
A
A
A
6
6
6
N
5
2.69
0.30
108.30
110.99
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
5
-3.87
0.60
122.90
119.03
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
5
-6.69
0.80
105.90
99.21
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
5
3.53
0.30
108.30
111.83
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
5
-5.03
0.80
105.90
100.87
A
A
A
O4'
C1'
C2'
DC
DC
DC
11
11
11
N
5
6.17
0.30
108.30
114.47
A
A
A
O4'
C1'
N9
DG
DG
DG
12
12
12
N
5
-5.98
0.80
105.90
99.92
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
5
4.15
0.30
108.30
112.45
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
5
7.76
1.20
119.70
127.46
B
B
B
C3'
O3'
P
DG
DG
DC
14
14
15
Y
5
4.28
0.60
118.90
123.18
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
5
-5.99
0.70
109.70
103.71
B
B
B
C1'
O4'
C4'
A
A
A
16
16
16
N
5
8.26
0.70
108.50
116.76
B
B
B
O4'
C1'
N9
A
A
A
16
16
16
N
5
5.47
0.70
108.50
113.97
B
B
B
O4'
C1'
N9
A
A
A
18
18
18
N
5
2.92
0.30
108.30
111.22
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
5
-3.85
0.60
122.90
119.05
B
B
B
C6
C5
C7
DT
DT
DT
21
21
21
N
5
-6.69
0.80
105.90
99.21
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
5
3.99
0.30
108.30
112.29
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
5
-5.26
0.80
105.90
100.64
B
B
B
O4'
C1'
C2'
DC
DC
DC
23
23
23
N
5
2.15
0.30
108.30
110.45
B
B
B
O4'
C1'
N1
DC
DC
DC
23
23
23
N
5
3.61
0.60
118.90
122.51
B
B
B
N1
C2
O2
DC
DC
DC
23
23
23
N
5
2.62
0.30
108.30
110.92
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
6
3.71
0.60
118.90
122.61
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
6
-6.40
0.80
105.90
99.50
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
6
5.55
0.30
108.30
113.85
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
6
7.60
1.20
119.70
127.30
A
A
A
C3'
O3'
P
DG
DG
DC
2
2
3
Y
6
4.09
0.60
118.90
122.99
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
6
-6.03
0.70
109.70
103.67
A
A
A
C1'
O4'
C4'
A
A
A
4
4
4
N
6
8.88
0.70
108.50
117.38
A
A
A
O4'
C1'
N9
A
A
A
4
4
4
N
6
5.88
0.70
108.50
114.38
A
A
A
O4'
C1'
N9
A
A
A
6
6
6
N
6
2.98
0.30
108.30
111.28
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
6
-3.99
0.60
122.90
118.91
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
6
-6.92
0.80
105.90
98.98
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
6
4.22
0.30
108.30
112.52
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
6
-5.33
0.80
105.90
100.57
A
A
A
O4'
C1'
C2'
DC
DC
DC
11
11
11
N
6
3.67
0.60
118.90
122.57
A
A
A
N1
C2
O2
DC
DC
DC
11
11
11
N
6
-7.33
0.80
105.90
98.57
A
A
A
O4'
C1'
C2'
DG
DG
DG
12
12
12
N
6
5.03
0.30
108.30
113.33
A
A
A
O4'
C1'
N9
DG
DG
DG
12
12
12
N
6
3.82
0.60
118.90
122.72
B
B
B
N1
C2
O2
DC
DC
DC
13
13
13
N
6
-7.03
0.80
105.90
98.87
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
6
5.48
0.30
108.30
113.78
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
6
4.02
0.60
118.90
122.92
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
6
-5.65
0.70
109.70
104.05
B
B
B
C1'
O4'
C4'
A
A
A
16
16
16
N
6
7.84
0.70
108.50
116.34
B
B
B
O4'
C1'
N9
A
A
A
16
16
16
N
6
5.96
0.70
108.50
114.46
B
B
B
O4'
C1'
N9
A
A
A
18
18
18
N
6
2.83
0.30
108.30
111.13
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
6
-3.64
0.60
122.90
119.26
B
B
B
C6
C5
C7
DT
DT
DT
20
20
20
N
6
-3.95
0.60
122.90
118.95
B
B
B
C6
C5
C7
DT
DT
DT
21
21
21
N
6
-6.84
0.80
105.90
99.06
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
6
4.80
0.30
108.30
113.10
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
6
-5.75
0.80
105.90
100.15
B
B
B
O4'
C1'
C2'
DC
DC
DC
23
23
23
N
6
3.83
0.60
118.90
122.73
B
B
B
N1
C2
O2
DC
DC
DC
23
23
23
N
6
4.72
0.30
108.30
113.02
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
7
3.75
0.60
118.90
122.65
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
7
-6.39
0.80
105.90
99.51
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
7
5.56
0.30
108.30
113.86
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
7
4.16
0.60
118.90
123.06
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
7
-6.30
0.70
109.70
103.40
A
A
A
C1'
O4'
C4'
A
A
A
4
4
4
N
7
8.73
0.70
108.50
117.23
A
A
A
O4'
C1'
N9
A
A
A
4
4
4
N
7
5.89
0.70
108.50
114.39
A
A
A
O4'
C1'
N9
A
A
A
6
6
6
N
7
3.03
0.30
108.30
111.33
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
7
-4.02
0.60
122.90
118.88
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
7
-6.63
0.80
105.90
99.27
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
7
4.31
0.30
108.30
112.61
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
7
-5.22
0.80
105.90
100.68
A
A
A
O4'
C1'
C2'
DC
DC
DC
11
11
11
N
7
-7.07
0.80
105.90
98.83
A
A
A
O4'
C1'
C2'
DG
DG
DG
12
12
12
N
7
5.78
0.30
108.30
114.08
A
A
A
O4'
C1'
N9
DG
DG
DG
12
12
12
N
7
2.69
0.30
108.30
110.99
B
B
B
O4'
C1'
N1
DC
DC
DC
13
13
13
N
7
-6.18
0.80
105.90
99.72
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
7
5.24
0.30
108.30
113.54
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
7
3.98
0.60
118.90
122.88
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
7
-5.82
0.70
109.70
103.88
B
B
B
C1'
O4'
C4'
A
A
A
16
16
16
N
7
7.93
0.70
108.50
116.43
B
B
B
O4'
C1'
N9
A
A
A
16
16
16
N
7
5.90
0.70
108.50
114.40
B
B
B
O4'
C1'
N9
A
A
A
18
18
18
N
7
2.64
0.30
108.30
110.94
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
7
-3.92
0.60
122.90
118.98
B
B
B
C6
C5
C7
DT
DT
DT
21
21
21
N
7
-6.85
0.80
105.90
99.05
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
7
4.32
0.30
108.30
112.62
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
7
-5.60
0.80
105.90
100.30
B
B
B
O4'
C1'
C2'
DC
DC
DC
23
23
23
N
7
3.70
0.60
118.90
122.60
B
B
B
N1
C2
O2
DC
DC
DC
23
23
23
N
7
5.39
0.30
108.30
113.69
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
8
-6.28
0.80
105.90
99.62
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
8
3.96
0.30
108.30
112.26
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
8
7.26
1.20
119.70
126.96
A
A
A
C3'
O3'
P
DG
DG
DC
2
2
3
Y
8
4.10
0.60
118.90
123.00
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
8
-5.91
0.70
109.70
103.79
A
A
A
C1'
O4'
C4'
A
A
A
4
4
4
N
8
8.23
0.70
108.50
116.73
A
A
A
O4'
C1'
N9
A
A
A
4
4
4
N
8
6.24
0.70
108.50
114.74
A
A
A
O4'
C1'
N9
A
A
A
6
6
6
N
8
3.20
0.30
108.30
111.50
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
8
-3.82
0.60
122.90
119.08
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
8
-6.53
0.80
105.90
99.37
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
8
3.70
0.30
108.30
112.00
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
8
-5.22
0.80
105.90
100.68
A
A
A
O4'
C1'
C2'
DC
DC
DC
11
11
11
N
8
-6.60
0.80
105.90
99.30
A
A
A
O4'
C1'
C2'
DG
DG
DG
12
12
12
N
8
4.14
0.30
108.30
112.44
A
A
A
O4'
C1'
N9
DG
DG
DG
12
12
12
N
8
-6.67
0.80
105.90
99.23
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
8
4.71
0.30
108.30
113.01
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
8
4.05
0.60
118.90
122.95
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
8
-5.61
0.70
109.70
104.09
B
B
B
C1'
O4'
C4'
A
A
A
16
16
16
N
8
7.93
0.70
108.50
116.43
B
B
B
O4'
C1'
N9
A
A
A
16
16
16
N
8
6.14
0.70
108.50
114.64
B
B
B
O4'
C1'
N9
A
A
A
18
18
18
N
8
3.33
0.30
108.30
111.63
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
8
-3.84
0.60
122.90
119.06
B
B
B
C6
C5
C7
DT
DT
DT
21
21
21
N
8
-6.79
0.80
105.90
99.11
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
8
3.35
0.30
108.30
111.65
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
9
3.61
0.60
118.90
122.51
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
9
-6.12
0.80
105.90
99.78
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
9
4.17
0.30
108.30
112.47
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
9
4.15
0.60
118.90
123.05
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
9
-5.76
0.70
109.70
103.94
A
A
A
C1'
O4'
C4'
A
A
A
4
4
4
N
9
8.09
0.70
108.50
116.59
A
A
A
O4'
C1'
N9
A
A
A
4
4
4
N
9
6.35
0.70
108.50
114.85
A
A
A
O4'
C1'
N9
A
A
A
6
6
6
N
9
2.82
0.30
108.30
111.12
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
9
-3.92
0.60
122.90
118.98
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
9
-6.62
0.80
105.90
99.28
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
9
2.95
0.30
108.30
111.25
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
9
-7.03
0.80
105.90
98.87
A
A
A
O4'
C1'
C2'
DG
DG
DG
12
12
12
N
9
7.37
0.30
108.30
115.67
A
A
A
O4'
C1'
N9
DG
DG
DG
12
12
12
N
9
-6.07
0.80
105.90
99.83
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
9
4.29
0.30
108.30
112.59
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
9
4.16
0.60
118.90
123.06
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
9
-5.76
0.70
109.70
103.94
B
B
B
C1'
O4'
C4'
A
A
A
16
16
16
N
9
8.10
0.70
108.50
116.60
B
B
B
O4'
C1'
N9
A
A
A
16
16
16
N
9
6.42
0.70
108.50
114.92
B
B
B
O4'
C1'
N9
A
A
A
18
18
18
N
9
2.91
0.30
108.30
111.21
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
9
-3.91
0.60
122.90
118.99
B
B
B
C6
C5
C7
DT
DT
DT
21
21
21
N
9
-6.63
0.80
105.90
99.27
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
9
3.00
0.30
108.30
111.30
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
9
6.33
0.30
108.30
114.63
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
10
-5.94
0.80
105.90
99.96
A
A
A
O4'
C1'
C2'
DG
DG
DG
2
2
2
N
10
3.98
0.30
108.30
112.28
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
10
4.04
0.60
118.90
122.94
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
10
-5.64
0.70
109.70
104.06
A
A
A
C1'
O4'
C4'
A
A
A
4
4
4
N
10
7.80
0.70
108.50
116.30
A
A
A
O4'
C1'
N9
A
A
A
4
4
4
N
10
6.27
0.70
108.50
114.77
A
A
A
O4'
C1'
N9
A
A
A
6
6
6
N
10
2.80
0.30
108.30
111.10
A
A
A
O4'
C1'
N1
DT
DT
DT
7
7
7
N
10
-3.68
0.60
122.90
119.22
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
10
-6.68
0.80
105.90
99.22
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
10
3.08
0.30
108.30
111.38
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
10
-4.87
0.80
105.90
101.03
A
A
A
O4'
C1'
C2'
DC
DC
DC
11
11
11
N
10
3.70
0.60
118.90
122.60
A
A
A
N1
C2
O2
DC
DC
DC
11
11
11
N
10
-7.68
0.80
105.90
98.22
A
A
A
O4'
C1'
C2'
DG
DG
DG
12
12
12
N
10
8.73
0.30
108.30
117.03
A
A
A
O4'
C1'
N9
DG
DG
DG
12
12
12
N
10
1.91
0.30
108.30
110.21
B
B
B
O4'
C1'
N1
DC
DC
DC
13
13
13
N
10
-6.29
0.80
105.90
99.61
B
B
B
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
10
4.05
0.30
108.30
112.35
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
10
4.11
0.60
118.90
123.01
B
B
B
N1
C2
O2
DC
DC
DC
15
15
15
N
10
-5.52
0.70
109.70
104.18
B
B
B
C1'
O4'
C4'
A
A
A
16
16
16
N
10
7.78
0.70
108.50
116.28
B
B
B
O4'
C1'
N9
A
A
A
16
16
16
N
10
6.23
0.70
108.50
114.73
B
B
B
O4'
C1'
N9
A
A
A
18
18
18
N
10
2.97
0.30
108.30
111.27
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
10
-3.60
0.60
122.90
119.30
B
B
B
C6
C5
C7
DT
DT
DT
21
21
21
N
10
-6.63
0.80
105.90
99.27
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
10
3.15
0.30
108.30
111.45
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
10
-4.93
0.80
105.90
100.97
B
B
B
O4'
C1'
C2'
DC
DC
DC
23
23
23
N
10
6.73
0.30
108.30
115.03
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
1
A
A
N7
C8
DG
DG
2
2
0.045
0.006
1.305
1.350
N
1
A
A
C5
C7
DT
DT
7
7
0.042
0.006
1.496
1.538
N
1
A
A
C5
C7
DT
DT
8
8
0.044
0.006
1.496
1.540
N
1
A
A
N7
C8
DG
DG
10
10
0.047
0.006
1.305
1.352
N
1
A
A
N7
C8
DG
DG
12
12
0.045
0.006
1.305
1.350
N
1
B
B
C3'
C2'
DC
DC
13
13
0.088
0.012
1.518
1.606
N
1
B
B
N7
C8
DG
DG
14
14
0.048
0.006
1.305
1.353
N
1
B
B
C5
C7
DT
DT
19
19
0.042
0.006
1.496
1.538
N
1
B
B
C5
C7
DT
DT
20
20
0.044
0.006
1.496
1.540
N
1
B
B
C5
C7
DT
DT
21
21
0.037
0.006
1.496
1.533
N
1
B
B
N7
C8
DG
DG
22
22
0.047
0.006
1.305
1.352
N
1
B
B
N7
C8
DG
DG
24
24
0.043
0.006
1.305
1.348
N
2
A
A
C3'
C2'
DC
DC
1
1
0.082
0.012
1.518
1.600
N
2
A
A
N7
C8
DG
DG
2
2
0.048
0.006
1.305
1.353
N
2
A
A
C5
C7
DT
DT
7
7
0.043
0.006
1.496
1.539
N
2
A
A
C5
C7
DT
DT
8
8
0.043
0.006
1.496
1.539
N
2
A
A
C5
C7
DT
DT
9
9
0.037
0.006
1.496
1.533
N
2
A
A
N7
C8
DG
DG
10
10
0.048
0.006
1.305
1.353
N
2
A
A
N7
C8
DG
DG
12
12
0.041
0.006
1.305
1.346
N
2
B
B
C3'
C2'
DC
DC
13
13
0.087
0.012
1.518
1.605
N
2
B
B
N7
C8
DG
DG
14
14
0.046
0.006
1.305
1.351
N
2
B
B
C5
C7
DT
DT
19
19
0.045
0.006
1.496
1.541
N
2
B
B
C5
C7
DT
DT
20
20
0.044
0.006
1.496
1.540
N
2
B
B
C5
C7
DT
DT
21
21
0.037
0.006
1.496
1.533
N
2
B
B
N7
C8
DG
DG
22
22
0.048
0.006
1.305
1.353
N
2
B
B
N7
C8
DG
DG
24
24
0.043
0.006
1.305
1.348
N
3
A
A
C3'
C2'
DC
DC
1
1
0.088
0.012
1.518
1.606
N
3
A
A
N7
C8
DG
DG
2
2
0.046
0.006
1.305
1.351
N
3
A
A
C5
C7
DT
DT
7
7
0.043
0.006
1.496
1.539
N
3
A
A
C5
C7
DT
DT
8
8
0.044
0.006
1.496
1.540
N
3
A
A
C5
C7
DT
DT
9
9
0.037
0.006
1.496
1.533
N
3
A
A
N7
C8
DG
DG
10
10
0.046
0.006
1.305
1.351
N
3
A
A
N7
C8
DG
DG
12
12
0.044
0.006
1.305
1.349
N
3
B
B
C3'
C2'
DC
DC
13
13
0.081
0.012
1.518
1.599
N
3
B
B
N7
C8
DG
DG
14
14
0.048
0.006
1.305
1.353
N
3
B
B
N7
C8
A
A
16
16
0.044
0.007
1.311
1.355
N
3
B
B
C5
C7
DT
DT
19
19
0.041
0.006
1.496
1.537
N
3
B
B
C5
C7
DT
DT
20
20
0.044
0.006
1.496
1.540
N
3
B
B
C5
C7
DT
DT
21
21
0.037
0.006
1.496
1.533
N
3
B
B
N7
C8
DG
DG
22
22
0.046
0.006
1.305
1.351
N
3
B
B
N7
C8
DG
DG
24
24
0.040
0.006
1.305
1.345
N
4
A
A
C3'
C2'
DC
DC
1
1
0.085
0.012
1.518
1.603
N
4
A
A
N7
C8
DG
DG
2
2
0.048
0.006
1.305
1.353
N
4
A
A
C5
C7
DT
DT
7
7
0.042
0.006
1.496
1.538
N
4
A
A
C5
C7
DT
DT
8
8
0.043
0.006
1.496
1.539
N
4
A
A
N7
C8
DG
DG
10
10
0.047
0.006
1.305
1.352
N
4
A
A
N7
C8
DG
DG
12
12
0.043
0.006
1.305
1.348
N
4
B
B
C3'
C2'
DC
DC
13
13
0.080
0.012
1.518
1.598
N
4
B
B
N7
C8
DG
DG
14
14
0.046
0.006
1.305
1.351
N
4
B
B
C5
C7
DT
DT
19
19
0.043
0.006
1.496
1.539
N
4
B
B
C5
C7
DT
DT
20
20
0.045
0.006
1.496
1.541
N
4
B
B
N7
C8
DG
DG
22
22
0.046
0.006
1.305
1.351
N
4
B
B
N7
C8
DG
DG
24
24
0.045
0.006
1.305
1.350
N
5
A
A
N7
C8
DG
DG
2
2
0.048
0.006
1.305
1.353
N
5
A
A
C5
C7
DT
DT
7
7
0.042
0.006
1.496
1.538
N
5
A
A
C5
C7
DT
DT
8
8
0.043
0.006
1.496
1.539
N
5
A
A
C5
C7
DT
DT
9
9
0.038
0.006
1.496
1.534
N
5
A
A
N7
C8
DG
DG
10
10
0.046
0.006
1.305
1.351
N
5
A
A
N7
C8
DG
DG
12
12
0.046
0.006
1.305
1.351
N
5
B
B
C3'
C2'
DC
DC
13
13
0.086
0.012
1.518
1.604
N
5
B
B
N7
C8
DG
DG
14
14
0.047
0.006
1.305
1.352
N
5
B
B
C5
C7
DT
DT
19
19
0.043
0.006
1.496
1.539
N
5
B
B
C5
C7
DT
DT
20
20
0.044
0.006
1.496
1.540
N
5
B
B
C5
C7
DT
DT
21
21
0.036
0.006
1.496
1.532
N
5
B
B
N7
C8
DG
DG
22
22
0.047
0.006
1.305
1.352
N
5
B
B
N7
C8
DG
DG
24
24
0.042
0.006
1.305
1.347
N
6
A
A
C3'
C2'
DC
DC
1
1
0.086
0.012
1.518
1.604
N
6
A
A
N7
C8
DG
DG
2
2
0.047
0.006
1.305
1.352
N
6
A
A
C5
C7
DT
DT
7
7
0.041
0.006
1.496
1.537
N
6
A
A
C5
C7
DT
DT
8
8
0.043
0.006
1.496
1.539
N
6
A
A
C5
C7
DT
DT
9
9
0.038
0.006
1.496
1.534
N
6
A
A
N7
C8
DG
DG
10
10
0.048
0.006
1.305
1.353
N
6
A
A
N7
C8
DG
DG
12
12
0.042
0.006
1.305
1.347
N
6
B
B
N7
C8
DG
DG
14
14
0.048
0.006
1.305
1.353
N
6
B
B
C5
C7
DT
DT
19
19
0.044
0.006
1.496
1.540
N
6
B
B
C5
C7
DT
DT
20
20
0.044
0.006
1.496
1.540
N
6
B
B
C5
C7
DT
DT
21
21
0.037
0.006
1.496
1.533
N
6
B
B
N7
C8
DG
DG
22
22
0.047
0.006
1.305
1.352
N
6
B
B
N7
C8
DG
DG
24
24
0.043
0.006
1.305
1.348
N
7
A
A
C3'
C2'
DC
DC
1
1
0.088
0.012
1.518
1.606
N
7
A
A
N7
C8
DG
DG
2
2
0.048
0.006
1.305
1.353
N
7
A
A
C5
C7
DT
DT
7
7
0.041
0.006
1.496
1.537
N
7
A
A
C5
C7
DT
DT
8
8
0.043
0.006
1.496
1.539
N
7
A
A
C5
C7
DT
DT
9
9
0.039
0.006
1.496
1.535
N
7
A
A
N7
C8
DG
DG
10
10
0.048
0.006
1.305
1.353
N
7
A
A
N7
C8
DG
DG
12
12
0.043
0.006
1.305
1.348
N
7
B
B
C3'
C2'
DC
DC
13
13
0.087
0.012
1.518
1.605
N
7
B
B
N7
C8
DG
DG
14
14
0.049
0.006
1.305
1.354
N
7
B
B
C5
C7
DT
DT
19
19
0.044
0.006
1.496
1.540
N
7
B
B
C5
C7
DT
DT
20
20
0.042
0.006
1.496
1.538
N
7
B
B
C5
C7
DT
DT
21
21
0.037
0.006
1.496
1.533
N
7
B
B
N7
C8
DG
DG
22
22
0.047
0.006
1.305
1.352
N
7
B
B
N7
C8
DG
DG
24
24
0.043
0.006
1.305
1.348
N
8
A
A
C3'
C2'
DC
DC
1
1
0.086
0.012
1.518
1.604
N
8
A
A
N7
C8
DG
DG
2
2
0.046
0.006
1.305
1.351
N
8
A
A
C5
C7
DT
DT
7
7
0.042
0.006
1.496
1.538
N
8
A
A
C5
C7
DT
DT
8
8
0.046
0.006
1.496
1.542
N
8
A
A
C5
C7
DT
DT
9
9
0.037
0.006
1.496
1.533
N
8
A
A
N7
C8
DG
DG
10
10
0.047
0.006
1.305
1.352
N
8
A
A
N7
C8
DG
DG
12
12
0.042
0.006
1.305
1.347
N
8
B
B
C3'
C2'
DC
DC
13
13
0.085
0.012
1.518
1.603
N
8
B
B
N7
C8
DG
DG
14
14
0.049
0.006
1.305
1.354
N
8
B
B
C5
C7
DT
DT
19
19
0.044
0.006
1.496
1.540
N
8
B
B
C5
C7
DT
DT
20
20
0.045
0.006
1.496
1.541
N
8
B
B
C5
C7
DT
DT
21
21
0.039
0.006
1.496
1.535
N
8
B
B
N7
C8
DG
DG
22
22
0.046
0.006
1.305
1.351
N
8
B
B
N7
C8
DG
DG
24
24
0.042
0.006
1.305
1.347
N
9
A
A
C3'
C2'
DC
DC
1
1
0.085
0.012
1.518
1.603
N
9
A
A
N7
C8
DG
DG
2
2
0.047
0.006
1.305
1.352
N
9
A
A
C5
C7
DT
DT
7
7
0.041
0.006
1.496
1.537
N
9
A
A
C5
C7
DT
DT
8
8
0.044
0.006
1.496
1.540
N
9
A
A
N7
C8
DG
DG
10
10
0.046
0.006
1.305
1.351
N
9
A
A
N7
C8
DG
DG
12
12
0.046
0.006
1.305
1.351
N
9
B
B
C3'
C2'
DC
DC
13
13
0.086
0.012
1.518
1.604
N
9
B
B
N7
C8
DG
DG
14
14
0.047
0.006
1.305
1.352
N
9
B
B
C5
C7
DT
DT
19
19
0.042
0.006
1.496
1.538
N
9
B
B
C5
C7
DT
DT
20
20
0.044
0.006
1.496
1.540
N
9
B
B
N7
C8
DG
DG
22
22
0.046
0.006
1.305
1.351
N
9
B
B
N7
C8
DG
DG
24
24
0.045
0.006
1.305
1.350
N
10
A
A
C3'
C2'
DC
DC
1
1
0.085
0.012
1.518
1.603
N
10
A
A
N7
C8
DG
DG
2
2
0.048
0.006
1.305
1.353
N
10
A
A
C5
C7
DT
DT
7
7
0.043
0.006
1.496
1.539
N
10
A
A
C5
C7
DT
DT
8
8
0.045
0.006
1.496
1.541
N
10
A
A
C5
C7
DT
DT
9
9
0.037
0.006
1.496
1.533
N
10
A
A
N7
C8
DG
DG
10
10
0.046
0.006
1.305
1.351
N
10
A
A
N7
C8
DG
DG
12
12
0.045
0.006
1.305
1.350
N
10
B
B
C3'
C2'
DC
DC
13
13
0.086
0.012
1.518
1.604
N
10
B
B
N7
C8
DG
DG
14
14
0.046
0.006
1.305
1.351
N
10
B
B
C5
C7
DT
DT
19
19
0.043
0.006
1.496
1.539
N
10
B
B
C5
C7
DT
DT
20
20
0.045
0.006
1.496
1.541
N
10
B
B
C5
C7
DT
DT
21
21
0.038
0.006
1.496
1.534
N
10
B
B
N7
C8
DG
DG
22
22
0.047
0.006
1.305
1.352
N
10
B
B
N7
C8
DG
DG
24
24
0.045
0.006
1.305
1.350
N
The Solution Structure of [d(CGC)r(aaa)d(TTTGCG)]2: Hybrid Junctions Flanked by DNA Duplexes
1
N
N
1
N
N
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
24
B
N1
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
24
B
O6
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
24
B
N2
DG
12
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
23
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
23
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
23
B
N4
DC
11
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
22
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
22
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
22
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
A
A
4
A
N1
A
4
1_555
B
DT
21
B
N3
DT
9
1_555
hydrog
WATSON-CRICK
A
A
4
A
N6
A
4
1_555
B
DT
21
B
O4
DT
9
1_555
hydrog
WATSON-CRICK
A
A
5
A
N1
A
5
1_555
B
DT
20
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
A
A
5
A
N6
A
5
1_555
B
DT
20
B
O4
DT
8
1_555
hydrog
WATSON-CRICK
A
A
6
A
N1
A
6
1_555
B
DT
19
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
A
6
A
N6
A
6
1_555
B
DT
19
B
O4
DT
7
1_555
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
7
1_555
B
A
18
B
N1
A
6
1_555
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
7
1_555
B
A
18
B
N6
A
6
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
A
17
B
N1
A
5
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
A
17
B
N6
A
5
1_555
hydrog
WATSON-CRICK
A
DT
9
A
N3
DT
9
1_555
B
A
16
B
N1
A
4
1_555
hydrog
WATSON-CRICK
A
DT
9
A
O4
DT
9
1_555
B
A
16
B
N6
A
4
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
B
DC
15
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
B
DC
15
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
B
DC
15
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
14
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
14
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
14
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N1
DG
12
1_555
B
DC
13
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N2
DG
12
1_555
B
DC
13
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
O6
DG
12
1_555
B
DC
13
B
N4
DC
1
1_555
DNA-RNA HYBRID
DNA-RNA HYBRID, DNA/RNA CHIMERIC HYBRID DUPLEX, DNA/RNA HYBRID, CHIMERIC DUPLEX
1DXN
PDB
1
1DXN
1
12
1DXN
1
12
1DXN
A
1
1
12
13
24
1DXN
13
24
1DXN
B
1
1
12
1
P 1