0.015921
0.000000
0.000000
0.000000
0.015921
0.000000
0.000000
0.000000
0.011355
0.00000
0.00000
0.00000
Hohenester, E.
Sasaki, T.
Timpl, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
62.810
62.810
88.070
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
297
1
10.1006/JMBI.2000.3553
10704302
Variable Zinc Coordination in Endostatin
2000
UK
Embo J.
EMJODG
0897
0261-4189
17
1656
10.1093/EMBOJ/17.6.1656
9501087
Crystal Structure of the Angiogenesis Inhibitor Endostatin at 1.5 Angstrom Resolution
1998
10.2210/pdb1dy0/pdb
pdb_00001dy0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293.0
1
IMAGE PLATE
1998-03-15
MARRESEARCH
GRAPHITE(002)
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
1.5418
ROTATING ANODE
ELLIOTT GX-21
20753.387
COLLAGEN ALPHA1(XVIII) CHAIN
ENDOSTATIN DOMAIN
YES
1
man
polymer
65.409
ZINC ION
2
syn
non-polymer
18.015
water
44
nat
water
no
no
APLAHTHQDFQPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKD
EVLSPSWDSLFSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGR
LLEQKAASCHNSYIVLCIENSFMTSFSK
APLAHTHQDFQPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKD
EVLSPSWDSLFSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGR
LLEQKAASCHNSYIVLCIENSFMTSFSK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
MOUSE
sample
10090
MUS MUSCULUS
EMBRYONIC KIDNEY CELL
EBNA-293
9606
HOMO SAPIENS
PCEP-PU
1
2.09
41.22
8.50
pH 8.50
diffrn_source
pdbx_unobs_or_zero_occ_atoms
refine
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_atoms
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Advisory
Data collection
Data collection
Refinement description
Advisory
Data collection
Database references
Derived calculations
Refinement description
1
0
2000-04-11
1
1
2011-05-07
1
2
2011-07-13
1
3
2017-06-28
1
4
2019-05-22
1
5
2023-12-06
_diffrn_source.pdbx_wavelength_list
_diffrn_source.type
_refine.pdbx_ls_cross_valid_method
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
ENDOSTATIN, C-TERMINAL 184 RESIDUES OF ALPHA1 CHAIN OF COLLAGEN XVIII
MURINE ENDOSTATIN, CRYSTAL FORM III, COLLAGEN ALPHA1(XVIII) CHAIN
MURINE COLLAGEN ALPHA1(XV), ENDOSTATIN DOMAIN MURINE ENDOSTATIN, CRYSTAL FORM III, COLLAGEN ALPHA1(XVIII) CHAIN
PDBE
Y
PDBE
2000-01-21
REL
ZN
ZINC ION
HOH
water
N-TERMINAL APLA MUTATION
1KOE
PDB ENTRY 1KOE
PDB
experimental model
ZN
401
2
ZN
ZN
401
A
ZN
402
2
ZN
ZN
402
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2017
3
HOH
HOH
2017
A
HOH
2018
3
HOH
HOH
2018
A
HOH
2019
3
HOH
HOH
2019
A
HOH
2020
3
HOH
HOH
2020
A
HOH
2021
3
HOH
HOH
2021
A
HOH
2022
3
HOH
HOH
2022
A
HOH
2023
3
HOH
HOH
2023
A
HOH
2024
3
HOH
HOH
2024
A
HOH
2025
3
HOH
HOH
2025
A
HOH
2026
3
HOH
HOH
2026
A
HOH
2027
3
HOH
HOH
2027
A
HOH
2028
3
HOH
HOH
2028
A
HOH
2029
3
HOH
HOH
2029
A
HOH
2030
3
HOH
HOH
2030
A
HOH
2031
3
HOH
HOH
2031
A
HOH
2032
3
HOH
HOH
2032
A
HOH
2033
3
HOH
HOH
2033
A
HOH
2034
3
HOH
HOH
2034
A
HOH
2035
3
HOH
HOH
2035
A
HOH
2036
3
HOH
HOH
2036
A
HOH
2037
3
HOH
HOH
2037
A
HOH
2038
3
HOH
HOH
2038
A
HOH
2039
3
HOH
HOH
2039
A
HOH
2040
3
HOH
HOH
2040
A
HOH
2041
3
HOH
HOH
2041
A
HOH
2042
3
HOH
HOH
2042
A
HOH
2043
3
HOH
HOH
2043
A
HOH
2044
3
HOH
HOH
2044
A
n
1
128
A
n
2
129
A
n
3
130
A
ALA
131
n
4
ALA
131
A
HIS
132
n
5
HIS
132
A
THR
133
n
6
THR
133
A
HIS
134
n
7
HIS
134
A
GLN
135
n
8
GLN
135
A
ASP
136
n
9
ASP
136
A
PHE
137
n
10
PHE
137
A
GLN
138
n
11
GLN
138
A
PRO
139
n
12
PRO
139
A
VAL
140
n
13
VAL
140
A
LEU
141
n
14
LEU
141
A
HIS
142
n
15
HIS
142
A
LEU
143
n
16
LEU
143
A
VAL
144
n
17
VAL
144
A
ALA
145
n
18
ALA
145
A
LEU
146
n
19
LEU
146
A
ASN
147
n
20
ASN
147
A
THR
148
n
21
THR
148
A
PRO
149
n
22
PRO
149
A
LEU
150
n
23
LEU
150
A
SER
151
n
24
SER
151
A
GLY
152
n
25
GLY
152
A
GLY
153
n
26
GLY
153
A
MET
154
n
27
MET
154
A
ARG
155
n
28
ARG
155
A
GLY
156
n
29
GLY
156
A
ILE
157
n
30
ILE
157
A
ARG
158
n
31
ARG
158
A
GLY
159
n
32
GLY
159
A
ALA
160
n
33
ALA
160
A
ASP
161
n
34
ASP
161
A
PHE
162
n
35
PHE
162
A
GLN
163
n
36
GLN
163
A
CYS
164
n
37
CYS
164
A
PHE
165
n
38
PHE
165
A
GLN
166
n
39
GLN
166
A
GLN
167
n
40
GLN
167
A
ALA
168
n
41
ALA
168
A
ARG
169
n
42
ARG
169
A
ALA
170
n
43
ALA
170
A
VAL
171
n
44
VAL
171
A
GLY
172
n
45
GLY
172
A
LEU
173
n
46
LEU
173
A
SER
174
n
47
SER
174
A
GLY
175
n
48
GLY
175
A
THR
176
n
49
THR
176
A
PHE
177
n
50
PHE
177
A
ARG
178
n
51
ARG
178
A
ALA
179
n
52
ALA
179
A
PHE
180
n
53
PHE
180
A
LEU
181
n
54
LEU
181
A
SER
182
n
55
SER
182
A
SER
183
n
56
SER
183
A
ARG
184
n
57
ARG
184
A
LEU
185
n
58
LEU
185
A
GLN
186
n
59
GLN
186
A
ASP
187
n
60
ASP
187
A
LEU
188
n
61
LEU
188
A
TYR
189
n
62
TYR
189
A
SER
190
n
63
SER
190
A
ILE
191
n
64
ILE
191
A
VAL
192
n
65
VAL
192
A
ARG
193
n
66
ARG
193
A
ARG
194
n
67
ARG
194
A
ALA
195
n
68
ALA
195
A
ASP
196
n
69
ASP
196
A
ARG
197
n
70
ARG
197
A
GLY
198
n
71
GLY
198
A
SER
199
n
72
SER
199
A
VAL
200
n
73
VAL
200
A
PRO
201
n
74
PRO
201
A
ILE
202
n
75
ILE
202
A
VAL
203
n
76
VAL
203
A
ASN
204
n
77
ASN
204
A
LEU
205
n
78
LEU
205
A
LYS
206
n
79
LYS
206
A
ASP
207
n
80
ASP
207
A
GLU
208
n
81
GLU
208
A
VAL
209
n
82
VAL
209
A
LEU
210
n
83
LEU
210
A
SER
211
n
84
SER
211
A
PRO
212
n
85
PRO
212
A
SER
213
n
86
SER
213
A
TRP
214
n
87
TRP
214
A
ASP
215
n
88
ASP
215
A
SER
216
n
89
SER
216
A
LEU
217
n
90
LEU
217
A
PHE
218
n
91
PHE
218
A
SER
219
n
92
SER
219
A
GLY
220
n
93
GLY
220
A
SER
221
n
94
SER
221
A
GLN
222
n
95
GLN
222
A
GLY
223
n
96
GLY
223
A
GLN
224
n
97
GLN
224
A
LEU
225
n
98
LEU
225
A
GLN
226
n
99
GLN
226
A
PRO
227
n
100
PRO
227
A
GLY
228
n
101
GLY
228
A
ALA
229
n
102
ALA
229
A
ARG
230
n
103
ARG
230
A
ILE
231
n
104
ILE
231
A
PHE
232
n
105
PHE
232
A
SER
233
n
106
SER
233
A
PHE
234
n
107
PHE
234
A
ASP
235
n
108
ASP
235
A
GLY
236
n
109
GLY
236
A
ARG
237
n
110
ARG
237
A
ASP
238
n
111
ASP
238
A
VAL
239
n
112
VAL
239
A
LEU
240
n
113
LEU
240
A
ARG
241
n
114
ARG
241
A
HIS
242
n
115
HIS
242
A
PRO
243
n
116
PRO
243
A
ALA
244
n
117
ALA
244
A
TRP
245
n
118
TRP
245
A
PRO
246
n
119
PRO
246
A
GLN
247
n
120
GLN
247
A
LYS
248
n
121
LYS
248
A
SER
249
n
122
SER
249
A
VAL
250
n
123
VAL
250
A
TRP
251
n
124
TRP
251
A
HIS
252
n
125
HIS
252
A
GLY
253
n
126
GLY
253
A
SER
254
n
127
SER
254
A
ASP
255
n
128
ASP
255
A
PRO
256
n
129
PRO
256
A
SER
257
n
130
SER
257
A
GLY
258
n
131
GLY
258
A
ARG
259
n
132
ARG
259
A
ARG
260
n
133
ARG
260
A
LEU
261
n
134
LEU
261
A
MET
262
n
135
MET
262
A
GLU
263
n
136
GLU
263
A
SER
264
n
137
SER
264
A
TYR
265
n
138
TYR
265
A
CYS
266
n
139
CYS
266
A
GLU
267
n
140
GLU
267
A
THR
268
n
141
THR
268
A
TRP
269
n
142
TRP
269
A
ARG
270
n
143
ARG
270
A
THR
271
n
144
THR
271
A
GLU
272
n
145
GLU
272
A
THR
273
n
146
THR
273
A
THR
274
n
147
THR
274
A
GLY
275
n
148
GLY
275
A
ALA
276
n
149
ALA
276
A
THR
277
n
150
THR
277
A
GLY
278
n
151
GLY
278
A
GLN
279
n
152
GLN
279
A
ALA
280
n
153
ALA
280
A
SER
281
n
154
SER
281
A
SER
282
n
155
SER
282
A
LEU
283
n
156
LEU
283
A
LEU
284
n
157
LEU
284
A
SER
285
n
158
SER
285
A
GLY
286
n
159
GLY
286
A
ARG
287
n
160
ARG
287
A
LEU
288
n
161
LEU
288
A
LEU
289
n
162
LEU
289
A
GLU
290
n
163
GLU
290
A
GLN
291
n
164
GLN
291
A
LYS
292
n
165
LYS
292
A
ALA
293
n
166
ALA
293
A
ALA
294
n
167
ALA
294
A
SER
295
n
168
SER
295
A
CYS
296
n
169
CYS
296
A
HIS
297
n
170
HIS
297
A
ASN
298
n
171
ASN
298
A
SER
299
n
172
SER
299
A
TYR
300
n
173
TYR
300
A
ILE
301
n
174
ILE
301
A
VAL
302
n
175
VAL
302
A
LEU
303
n
176
LEU
303
A
CYS
304
n
177
CYS
304
A
ILE
305
n
178
ILE
305
A
GLU
306
n
179
GLU
306
A
ASN
307
n
180
ASN
307
A
SER
308
n
181
SER
308
A
PHE
309
n
182
PHE
309
A
MET
310
n
183
MET
310
A
n
184
311
A
n
185
312
A
n
186
313
A
n
187
314
A
n
188
315
A
software_defined_assembly
PQS
1
monomeric
A
HIS
132
A
ND1
HIS
5
1_555
A
ZN
402
C
ZN
ZN
1_555
A
HIS
132
A
N
HIS
5
1_555
95.1
A
HIS
132
A
ND1
HIS
5
1_555
A
ZN
402
C
ZN
ZN
1_555
A
HIS
297
A
NE2
HIS
170
4_464
86.1
A
HIS
132
A
N
HIS
5
1_555
A
ZN
402
C
ZN
ZN
1_555
A
HIS
297
A
NE2
HIS
170
4_464
176.5
A
HIS
134
A
NE2
HIS
7
1_555
A
ZN
401
B
ZN
ZN
1_555
A
ASP
136
A
OD2
ASP
9
1_555
112.7
A
HIS
134
A
NE2
HIS
7
1_555
A
ZN
401
B
ZN
ZN
1_555
A
HIS
142
A
NE2
HIS
15
1_555
107.7
A
ASP
136
A
OD2
ASP
9
1_555
A
ZN
401
B
ZN
ZN
1_555
A
HIS
142
A
NE2
HIS
15
1_555
112.1
A
HIS
134
A
NE2
HIS
7
1_555
A
ZN
401
B
ZN
ZN
1_555
A
ASP
207
A
OD1
ASP
80
1_555
131.4
A
ASP
136
A
OD2
ASP
9
1_555
A
ZN
401
B
ZN
ZN
1_555
A
ASP
207
A
OD1
ASP
80
1_555
98.5
A
HIS
142
A
NE2
HIS
15
1_555
A
ZN
401
B
ZN
ZN
1_555
A
ASP
207
A
OD1
ASP
80
1_555
92.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ARG
178
A
N
ARG
51
A
O
ILE
305
A
O
ILE
178
A
N
GLU
306
A
N
GLU
179
A
O
HIS
142
A
O
HIS
15
A
N
LEU
143
A
N
LEU
16
A
O
VAL
203
A
O
VAL
76
A
O
ILE
202
A
O
ILE
75
A
N
LEU
210
A
N
LEU
83
A
N
VAL
250
A
N
VAL
123
A
O
SER
281
A
O
SER
154
A
N
ALA
280
A
N
ALA
153
A
O
LYS
292
A
O
LYS
165
1
A
CD
ARG
158
A
CD
ARG
31
0
Y
1
A
NE
ARG
158
A
NE
ARG
31
0
Y
1
A
CZ
ARG
158
A
CZ
ARG
31
0
Y
1
A
NH1
ARG
158
A
NH1
ARG
31
0
Y
1
A
NH2
ARG
158
A
NH2
ARG
31
0
Y
1
A
NE
ARG
184
A
NE
ARG
57
0
Y
1
A
CZ
ARG
184
A
CZ
ARG
57
0
Y
1
A
NH1
ARG
184
A
NH1
ARG
57
0
Y
1
A
NH2
ARG
184
A
NH2
ARG
57
0
Y
1
A
NE
ARG
194
A
NE
ARG
67
0
Y
1
A
CZ
ARG
194
A
CZ
ARG
67
0
Y
1
A
NH1
ARG
194
A
NH1
ARG
67
0
Y
1
A
NH2
ARG
194
A
NH2
ARG
67
0
Y
1
A
CE
LYS
206
A
CE
LYS
79
0
Y
1
A
NZ
LYS
206
A
NZ
LYS
79
0
Y
1
A
CD
ARG
259
A
CD
ARG
132
0
Y
1
A
NE
ARG
259
A
NE
ARG
132
0
Y
1
A
CZ
ARG
259
A
CZ
ARG
132
0
Y
1
A
NH1
ARG
259
A
NH1
ARG
132
0
Y
1
A
NH2
ARG
259
A
NH2
ARG
132
0
Y
1
A
CG
LYS
292
A
CG
LYS
165
0
Y
1
A
CD
LYS
292
A
CD
LYS
165
0
Y
1
A
CE
LYS
292
A
CE
LYS
165
0
Y
1
A
NZ
LYS
292
A
NZ
LYS
165
0
Y
1
A
ALA
128
A
ALA
1
1
Y
1
A
PRO
129
A
PRO
2
1
Y
1
A
LEU
130
A
LEU
3
1
Y
1
A
THR
311
A
THR
184
1
Y
1
A
SER
312
A
SER
185
1
Y
1
A
PHE
313
A
PHE
186
1
Y
1
A
SER
314
A
SER
187
1
Y
1
A
LYS
315
A
LYS
188
1
Y
1
A
HIS
252
-145.60
-27.69
1
A
TYR
265
-145.86
36.71
0.272
0.208
0.208
2.20
8.00
9412
10.0
99.9
RANDOM
1
INDIVIDUAL RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1KOE
2.20
8.00
44
1446
2
0
1400
0.007
1.6
2.200
15.000
1DY0
9450
0.07900
1
8.100
99.8
0.19700
2.20
2.32
1
99.9
refinement
X-PLOR
data reduction
MOSFLM
data scaling
SCALA
phasing
AMoRE
Murine endostatin, crystal form II
1
N
N
2
N
N
2
N
N
3
N
N
BIOLOGICAL_UNIT: MONOMER
A
ARG
155
A
ARG
28
HELX_P
A
ALA
170
A
ALA
43
1
1
16
A
ASP
187
A
ASP
60
HELX_P
A
VAL
192
A
VAL
65
5
2
6
A
ARG
193
A
ARG
66
HELX_P
A
ARG
197
A
ARG
70
5
3
5
A
SER
213
A
SER
86
HELX_P
A
PHE
218
A
PHE
91
1
4
6
A
TYR
265
A
TYR
138
HELX_P
A
ARG
270
A
ARG
143
1
5
6
A
LEU
284
A
LEU
157
HELX_P
A
GLY
286
A
GLY
159
5
6
3
disulf
2.021
A
CYS
164
A
SG
CYS
37
1_555
A
CYS
304
A
SG
CYS
177
1_555
disulf
2.026
A
CYS
266
A
SG
CYS
139
1_555
A
CYS
296
A
SG
CYS
169
1_555
metalc
2.229
A
HIS
132
A
ND1
HIS
5
1_555
A
ZN
402
C
ZN
ZN
1_555
metalc
2.507
A
HIS
132
A
N
HIS
5
1_555
A
ZN
402
C
ZN
ZN
1_555
metalc
1.865
A
HIS
134
A
NE2
HIS
7
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
1.966
A
ASP
136
A
OD2
ASP
9
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
2.103
A
HIS
142
A
NE2
HIS
15
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
1.805
A
ASP
207
A
OD1
ASP
80
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
2.048
A
HIS
297
A
NE2
HIS
170
4_464
A
ZN
402
C
ZN
ZN
1_555
ANGIOGENESIS INHIBITOR
ANGIOGENESIS INHIBITOR
CA1H_MOUSE
UNP
1
P39061
1128
1315
1DY0
128
315
P39061
A
1
1
188
1
LEU
engineered mutation
ALA
128
1DY0
A
P39061
UNP
1128
1
1
SER
engineered mutation
PRO
129
1DY0
A
P39061
UNP
1129
2
5
3
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
PHE
177
A
PHE
50
A
ALA
179
A
ALA
52
A
LEU
303
A
LEU
176
A
GLU
306
A
GLU
179
A
LEU
141
A
LEU
14
A
ALA
145
A
ALA
18
A
ILE
202
A
ILE
75
A
VAL
203
A
VAL
76
A
VAL
209
A
VAL
82
A
SER
211
A
SER
84
A
SER
249
A
SER
122
A
TRP
251
A
TRP
124
A
THR
277
A
THR
150
A
SER
282
A
SER
155
A
LYS
292
A
LYS
165
A
SER
295
A
SER
168
BINDING SITE FOR RESIDUE ZN A 401
A
ZN
401
Software
4
BINDING SITE FOR RESIDUE ZN A 402
A
ZN
402
Software
3
A
HIS
134
A
HIS
7
4
1_555
A
ASP
136
A
ASP
9
4
1_555
A
HIS
142
A
HIS
15
4
1_555
A
ASP
207
A
ASP
80
4
1_555
A
ALA
131
A
ALA
4
3
1_555
A
HIS
132
A
HIS
5
3
1_555
A
HIS
297
A
HIS
170
3
1_555
92
P 41 21 2