0.010599
0.006119
0.000000
0.000000
0.012238
0.000000
0.000000
0.000000
0.012140
0.00000
0.00000
0.00000
Di Marco, S.
Rizzi, M.
Volpari, C.
Walsh, M.
Narjes, F.
Colarusso, S.
De Francesco, R.
Matassa, V.G.
Sollazzo, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
94.350
94.350
82.370
C21 H33 F2 N3 O9
509.498
N-(tert-butoxycarbonyl)-L-alpha-glutamyl-N-[(1R)-1-(carboxycarbonyl)-3,3-difluoropropyl]-L-leucinamide
peptide-like
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
O
N
2
N
C
N
3
N
O
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
C
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
C
N
14
N
C
N
15
N
O
N
16
N
O
N
17
N
N
N
18
S
C
N
19
N
C
N
20
N
O
N
21
N
C
N
22
N
C
N
23
N
C
N
24
N
C
N
25
N
N
N
26
S
C
N
27
N
C
N
28
N
O
N
29
N
C
N
30
N
C
N
31
N
F
N
32
N
F
N
33
N
C
N
34
N
O
N
35
N
O
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
N
N
70
S
C
N
71
N
C
N
72
N
O
N
73
N
C
N
74
N
O
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
N
N
83
S
C
N
84
N
C
N
85
N
O
N
86
N
C
N
87
N
C
N
88
N
C
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
N
93
N
O
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
N
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
N
N
127
S
C
N
128
N
C
N
129
N
O
N
130
N
C
N
131
N
C
N
132
N
O
N
133
N
O
N
134
N
O
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
N
N
143
R
C
N
144
N
C
N
145
N
O
N
146
N
C
N
147
N
S
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
N
N
157
S
C
N
158
N
C
N
159
N
O
N
160
N
C
N
161
N
C
N
162
N
C
N
163
N
O
N
164
N
N
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
N
N
177
S
C
N
178
N
C
N
179
N
O
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
O
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
N
N
196
N
C
N
197
N
C
N
198
N
O
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
Y
210
N
C
Y
211
N
N
Y
212
N
C
Y
213
N
C
Y
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
N
N
230
S
C
N
231
N
C
N
232
N
O
N
233
S
C
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
N
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
N
N
299
S
C
N
300
N
C
N
301
N
O
N
302
N
C
N
303
N
C
N
304
N
S
N
305
N
C
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
O
N
364
N
O
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
R
C
N
377
N
O
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
N
N
390
S
C
N
391
N
C
N
392
N
O
N
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
N
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
N
403
N
O
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
N
427
N
O
N
428
N
O
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
N
N
441
S
C
N
442
N
C
N
443
N
O
N
444
N
C
N
445
N
C
N
446
N
C
N
447
N
O
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
ZN
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
doub
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
doub
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
doub
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
doub
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
Y
207
N
sing
Y
208
N
doub
Y
209
N
doub
N
210
N
sing
Y
211
N
sing
N
212
N
sing
Y
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
doub
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
N
320
N
sing
Y
321
N
doub
N
322
N
sing
Y
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
doub
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
Y
384
N
doub
Y
385
N
sing
Y
386
N
sing
N
387
N
sing
Y
388
N
doub
Y
389
N
sing
Y
390
N
sing
N
391
N
sing
Y
392
N
sing
Y
393
N
doub
N
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
doub
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
Y
412
N
doub
Y
413
N
sing
Y
414
N
sing
N
415
N
sing
Y
416
N
doub
N
417
N
sing
Y
418
N
doub
N
419
N
sing
Y
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
doub
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
275
7152
10.1074/JBC.275.10.7152
10702283
Inhibition of the Hepatitis C Virus Ns3/4A Protease the Crystal Structures of Two Protease-Inhibitor Complexes
2000
10.2210/pdb1dy9/pdb
pdb_00001dy9
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
TOROIDAL MIRROR
CCD
1999-02-15
MARRESEARCH
SI(111)
SINGLE WAVELENGTH
M
x-ray
1
0.936
1.0
ID14-3
ESRF
0.936
SYNCHROTRON
ESRF BEAMLINE ID14-3
19749.553
PROTEASE/HELICASE NS3 (P70)
3.4.22.-
PROTEASE
2
man
polymer
1686.097
NONSTRUCTURAL PROTEIN NS4A (P4)
RESIDUES 956-967
YES
2
syn
polymer
509.498
N-(tert-butoxycarbonyl)-L-alpha-glutamyl-N-[(1R)-1-(carboxycarbonyl)-3,3-difluoropropyl]-L-leucinamide
2
syn
non-polymer
65.409
ZINC ION
1
syn
non-polymer
18.015
water
213
nat
water
no
no
APITAYSQQTRGLLGCIITSLTGRDKNQVDGEVQVLSTATQSFLATCVNGVCWTVYHGAGSKTLAGPKGPITQMYTNVDQ
DLVGWPAPPGARSMTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPVSYLKGSSGGPLLCPSGHVVGIFRAAVCT
RGVAKAVDFIPVESMETTMRSPVFTDN
APITAYSQQTRGLLGCIITSLTGRDKNQVDGEVQVLSTATQSFLATCVNGVCWTVYHGAGSKTLAGPKGPITQMYTNVDQ
DLVGWPAPPGARSMTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPVSYLKGSSGGPLLCPSGHVVGIFRAAVCT
RGVAKAVDFIPVESMETTMRSPVFTDN
A,B
polypeptide(L)
no
no
KGSVVIVGRIILSGRK
KGSVVIVGRIILSGRK
C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ISOLATE TAIWAN
sample
CDNA OF HEPATITIS C VIRUS
HCV
31645
HEPATITIS C VIRUS (ISOLATE TAIWAN)
469008
ESCHERICHIA COLI
BL21(DE3)
PT7-7
1
2.37
47.68
VAPOR DIFFUSION
5.10
THE NS3 PROTEIN (1MG/ML) WAS INCUBATE AT 4C WITH THE NS4A COFACTOR PEPTIDE, CONTAINING A SOLUBIZING LYSINE TAG AT ITS N- AND C-TERMINI(KGSVVIVGRIILSGRK), AT A MOLAR RATIO OF 1:2 AND CONCENTRATED TO 290 MICROMOLAR. NS3J/4A CRYSTALS, WITH A MAXIMUM SIZE OF 0.6 X 0.3 X 0.2 MM**3, WERE OBTAINED BY BOTH HANGING- AND SITTING-DROP VAPOUR DIFFUSION METHODS AFTER TWO WEEKS AT ROOM TEMPERATURE, WITH 3.4 M NACL, 10MM DTT, 0.1 M CITRATE BUFFER PH 5.1. THE TERNARY COMPLEX WITH INHIBITOR WAS PREPARED BY ADDING 5.0 MM OF INIBITOR TO CRYSTALS THAT WERE STABILISED IN 4.5 M NACL, 10 MM DTT, 0.1 M CITRATE BUFFER, PH 5.1.
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
struct_biol
struct_conn
pdbx_database_status
reflns_shell
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_conn_type
struct_site
repository
Initial release
Atomic model
Database references
Derived calculations
Non-polymer description
Structure summary
Version format compliance
Other
Data collection
Derived calculations
Experimental preparation
Other
Data collection
Other
Data collection
Database references
Derived calculations
Refinement description
1
0
2001-01-28
1
1
2011-07-13
1
2
2012-11-30
1
3
2019-05-08
1
4
2019-10-09
1
5
2023-12-06
_exptl_crystal_grow.method
_pdbx_database_status.recvd_author_approval
_struct_conn.pdbx_leaving_atom_flag
_pdbx_database_status.status_code_sf
_reflns_shell.pdbx_Rsym_value
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn_type.id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
INHIBITION OF THE HEPATITIS C VIRUS NS3/4A PROTEASE. THE CRYSTAL STRUCTURES OF TWO PROTEASE-INHIBITOR COMPLEXES (APO STRUCTURE)
INHIBITION OF THE HEPATITIS C VIRUS NS3/4A PROTEASE. THE CRYSTAL STRUCTURES OF TWO PROTEASE-INHIBITOR COMPLEXES (INHIBITOR II)
BK STRAIN HEPATITIS C VIRUS (HCV) NS3-NS4A (PROTEASE)
SHEET
DETERMINATION METHOD: DSSP
THE SHEETS PRESENTED AS AC AND BC IN EACH CHAIN ON SHEET RECORDS
BELOW IS ACTUALLY AN 6-STRANDED BARREL THIS IS REPRESENTED BY
A 7-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS
ARE IDENTICAL.
PDBE
Y
PDBE
2000-01-31
REL
REL
2ZF
N-(tert-butoxycarbonyl)-L-alpha-glutamyl-N-[(1R)-1-(carboxycarbonyl)-3,3-difluoropropyl]-L-leucinamide
ZN
ZINC ION
HOH
water
31645
HEPATITIS C VIRUS
sample
GENOME POLYPROTEIN, ID POLG_HCVJA_7, PROTEASE NS3
GENOME POLYPROTEIN, ID POLG_HCVJA_8, NONSTRUCTURAL PROTEIN
THE SWISSPROT ENTRY POLG_HCVJA GIVES A FULL DESCRIPTION OF THE
GENOME POLYPROTEIN FROM HEPATITIS C VIRUS (ISOLATE JAPANESE)
THAT CONTAINS THE FOLLOWING MATURE PROTEINS PRODUCED BY
POST-TRANSLATIONAL PROCESSING -
CAPSID PROTEIN C (CORE PROTEIN) (P22);
ENVELOPE GLYCOPROTEIN E1 (GP32) (GP35);
ENVELOPE GLYCOPROTEIN E2 (GP68) (GP70) (NS1);
PROTEIN P7;
NONSTRUCTURAL PROTEIN NS2 (P21) (EC 3.4.22.*);
PROTEASE/HELICASE NS3 (P70) (EC 3.4.21.*);
NONSTRUCTURAL PROTEIN NS4A (P4);
NONSTRUCTURAL PROTEIN NS4B (P27);
NONSTRUCTURAL PROTEIN NS5A (P56);
NONSTRUCTURAL PROTEIN NS5B (P66) (P70)
(RNA-DIRECTED RNA POLYMERASE) (EC 2.7.7.48)].
HOWEVER, THE SWISSPROT ENTRY Q81755 (ISOLATE TAIWANESE)
IS A 100% MATCH TO THE NS3 PROTEIN STUDIED HERE.
1DY7
PDB ENTRY 1DY7
PDB
experimental model
Inhibitor
BOC-GLU-LEU-FKI, PEPTIDE INHIBITOR
Peptide-like
2ZF
401
3
2ZF
2ZF
401
A
2ZF
401
3
2ZF
2ZF
401
B
ZN
300
4
ZN
ZN
300
B
HOH
2001
5
HOH
HOH
2001
A
HOH
2002
5
HOH
HOH
2002
A
HOH
2003
5
HOH
HOH
2003
A
HOH
2004
5
HOH
HOH
2004
A
HOH
2005
5
HOH
HOH
2005
A
HOH
2006
5
HOH
HOH
2006
A
HOH
2007
5
HOH
HOH
2007
A
HOH
2008
5
HOH
HOH
2008
A
HOH
2009
5
HOH
HOH
2009
A
HOH
2010
5
HOH
HOH
2010
A
HOH
2011
5
HOH
HOH
2011
A
HOH
2012
5
HOH
HOH
2012
A
HOH
2013
5
HOH
HOH
2013
A
HOH
2014
5
HOH
HOH
2014
A
HOH
2015
5
HOH
HOH
2015
A
HOH
2016
5
HOH
HOH
2016
A
HOH
2017
5
HOH
HOH
2017
A
HOH
2018
5
HOH
HOH
2018
A
HOH
2019
5
HOH
HOH
2019
A
HOH
2020
5
HOH
HOH
2020
A
HOH
2021
5
HOH
HOH
2021
A
HOH
2022
5
HOH
HOH
2022
A
HOH
2023
5
HOH
HOH
2023
A
HOH
2024
5
HOH
HOH
2024
A
HOH
2025
5
HOH
HOH
2025
A
HOH
2026
5
HOH
HOH
2026
A
HOH
2027
5
HOH
HOH
2027
A
HOH
2028
5
HOH
HOH
2028
A
HOH
2029
5
HOH
HOH
2029
A
HOH
2030
5
HOH
HOH
2030
A
HOH
2031
5
HOH
HOH
2031
A
HOH
2032
5
HOH
HOH
2032
A
HOH
2033
5
HOH
HOH
2033
A
HOH
2034
5
HOH
HOH
2034
A
HOH
2035
5
HOH
HOH
2035
A
HOH
2036
5
HOH
HOH
2036
A
HOH
2037
5
HOH
HOH
2037
A
HOH
2038
5
HOH
HOH
2038
A
HOH
2039
5
HOH
HOH
2039
A
HOH
2040
5
HOH
HOH
2040
A
HOH
2041
5
HOH
HOH
2041
A
HOH
2042
5
HOH
HOH
2042
A
HOH
2043
5
HOH
HOH
2043
A
HOH
2044
5
HOH
HOH
2044
A
HOH
2045
5
HOH
HOH
2045
A
HOH
2046
5
HOH
HOH
2046
A
HOH
2047
5
HOH
HOH
2047
A
HOH
2048
5
HOH
HOH
2048
A
HOH
2049
5
HOH
HOH
2049
A
HOH
2050
5
HOH
HOH
2050
A
HOH
2051
5
HOH
HOH
2051
A
HOH
2052
5
HOH
HOH
2052
A
HOH
2053
5
HOH
HOH
2053
A
HOH
2054
5
HOH
HOH
2054
A
HOH
2055
5
HOH
HOH
2055
A
HOH
2056
5
HOH
HOH
2056
A
HOH
2057
5
HOH
HOH
2057
A
HOH
2058
5
HOH
HOH
2058
A
HOH
2059
5
HOH
HOH
2059
A
HOH
2060
5
HOH
HOH
2060
A
HOH
2061
5
HOH
HOH
2061
A
HOH
2062
5
HOH
HOH
2062
A
HOH
2063
5
HOH
HOH
2063
A
HOH
2064
5
HOH
HOH
2064
A
HOH
2065
5
HOH
HOH
2065
A
HOH
2066
5
HOH
HOH
2066
A
HOH
2067
5
HOH
HOH
2067
A
HOH
2068
5
HOH
HOH
2068
A
HOH
2069
5
HOH
HOH
2069
A
HOH
2070
5
HOH
HOH
2070
A
HOH
2071
5
HOH
HOH
2071
A
HOH
2072
5
HOH
HOH
2072
A
HOH
2073
5
HOH
HOH
2073
A
HOH
2074
5
HOH
HOH
2074
A
HOH
2075
5
HOH
HOH
2075
A
HOH
2076
5
HOH
HOH
2076
A
HOH
2077
5
HOH
HOH
2077
A
HOH
2078
5
HOH
HOH
2078
A
HOH
2079
5
HOH
HOH
2079
A
HOH
2080
5
HOH
HOH
2080
A
HOH
2081
5
HOH
HOH
2081
A
HOH
2082
5
HOH
HOH
2082
A
HOH
2083
5
HOH
HOH
2083
A
HOH
2084
5
HOH
HOH
2084
A
HOH
2085
5
HOH
HOH
2085
A
HOH
2086
5
HOH
HOH
2086
A
HOH
2087
5
HOH
HOH
2087
A
HOH
2088
5
HOH
HOH
2088
A
HOH
2089
5
HOH
HOH
2089
A
HOH
2090
5
HOH
HOH
2090
A
HOH
2091
5
HOH
HOH
2091
A
HOH
2092
5
HOH
HOH
2092
A
HOH
2093
5
HOH
HOH
2093
A
HOH
2094
5
HOH
HOH
2094
A
HOH
2095
5
HOH
HOH
2095
A
HOH
2096
5
HOH
HOH
2096
A
HOH
2097
5
HOH
HOH
2097
A
HOH
2098
5
HOH
HOH
2098
A
HOH
2099
5
HOH
HOH
2099
A
HOH
2001
5
HOH
HOH
2001
B
HOH
2002
5
HOH
HOH
2002
B
HOH
2003
5
HOH
HOH
2003
B
HOH
2004
5
HOH
HOH
2004
B
HOH
2005
5
HOH
HOH
2005
B
HOH
2006
5
HOH
HOH
2006
B
HOH
2007
5
HOH
HOH
2007
B
HOH
2008
5
HOH
HOH
2008
B
HOH
2009
5
HOH
HOH
2009
B
HOH
2010
5
HOH
HOH
2010
B
HOH
2011
5
HOH
HOH
2011
B
HOH
2012
5
HOH
HOH
2012
B
HOH
2013
5
HOH
HOH
2013
B
HOH
2014
5
HOH
HOH
2014
B
HOH
2015
5
HOH
HOH
2015
B
HOH
2016
5
HOH
HOH
2016
B
HOH
2017
5
HOH
HOH
2017
B
HOH
2018
5
HOH
HOH
2018
B
HOH
2019
5
HOH
HOH
2019
B
HOH
2020
5
HOH
HOH
2020
B
HOH
2021
5
HOH
HOH
2021
B
HOH
2022
5
HOH
HOH
2022
B
HOH
2023
5
HOH
HOH
2023
B
HOH
2024
5
HOH
HOH
2024
B
HOH
2025
5
HOH
HOH
2025
B
HOH
2026
5
HOH
HOH
2026
B
HOH
2027
5
HOH
HOH
2027
B
HOH
2028
5
HOH
HOH
2028
B
HOH
2029
5
HOH
HOH
2029
B
HOH
2030
5
HOH
HOH
2030
B
HOH
2031
5
HOH
HOH
2031
B
HOH
2032
5
HOH
HOH
2032
B
HOH
2033
5
HOH
HOH
2033
B
HOH
2034
5
HOH
HOH
2034
B
HOH
2035
5
HOH
HOH
2035
B
HOH
2036
5
HOH
HOH
2036
B
HOH
2037
5
HOH
HOH
2037
B
HOH
2038
5
HOH
HOH
2038
B
HOH
2039
5
HOH
HOH
2039
B
HOH
2040
5
HOH
HOH
2040
B
HOH
2041
5
HOH
HOH
2041
B
HOH
2042
5
HOH
HOH
2042
B
HOH
2043
5
HOH
HOH
2043
B
HOH
2044
5
HOH
HOH
2044
B
HOH
2045
5
HOH
HOH
2045
B
HOH
2046
5
HOH
HOH
2046
B
HOH
2047
5
HOH
HOH
2047
B
HOH
2048
5
HOH
HOH
2048
B
HOH
2049
5
HOH
HOH
2049
B
HOH
2050
5
HOH
HOH
2050
B
HOH
2051
5
HOH
HOH
2051
B
HOH
2052
5
HOH
HOH
2052
B
HOH
2053
5
HOH
HOH
2053
B
HOH
2054
5
HOH
HOH
2054
B
HOH
2055
5
HOH
HOH
2055
B
HOH
2056
5
HOH
HOH
2056
B
HOH
2057
5
HOH
HOH
2057
B
HOH
2058
5
HOH
HOH
2058
B
HOH
2059
5
HOH
HOH
2059
B
HOH
2060
5
HOH
HOH
2060
B
HOH
2061
5
HOH
HOH
2061
B
HOH
2062
5
HOH
HOH
2062
B
HOH
2063
5
HOH
HOH
2063
B
HOH
2064
5
HOH
HOH
2064
B
HOH
2065
5
HOH
HOH
2065
B
HOH
2066
5
HOH
HOH
2066
B
HOH
2067
5
HOH
HOH
2067
B
HOH
2068
5
HOH
HOH
2068
B
HOH
2069
5
HOH
HOH
2069
B
HOH
2070
5
HOH
HOH
2070
B
HOH
2071
5
HOH
HOH
2071
B
HOH
2072
5
HOH
HOH
2072
B
HOH
2073
5
HOH
HOH
2073
B
HOH
2074
5
HOH
HOH
2074
B
HOH
2075
5
HOH
HOH
2075
B
HOH
2076
5
HOH
HOH
2076
B
HOH
2077
5
HOH
HOH
2077
B
HOH
2078
5
HOH
HOH
2078
B
HOH
2079
5
HOH
HOH
2079
B
HOH
2080
5
HOH
HOH
2080
B
HOH
2081
5
HOH
HOH
2081
B
HOH
2082
5
HOH
HOH
2082
B
HOH
2083
5
HOH
HOH
2083
B
HOH
2084
5
HOH
HOH
2084
B
HOH
2085
5
HOH
HOH
2085
B
HOH
2086
5
HOH
HOH
2086
B
HOH
2087
5
HOH
HOH
2087
B
HOH
2088
5
HOH
HOH
2088
B
HOH
2089
5
HOH
HOH
2089
B
HOH
2090
5
HOH
HOH
2090
B
HOH
2091
5
HOH
HOH
2091
B
HOH
2092
5
HOH
HOH
2092
B
HOH
2093
5
HOH
HOH
2093
B
HOH
2094
5
HOH
HOH
2094
B
HOH
2095
5
HOH
HOH
2095
B
HOH
2096
5
HOH
HOH
2096
B
HOH
2097
5
HOH
HOH
2097
B
HOH
2098
5
HOH
HOH
2098
B
HOH
2099
5
HOH
HOH
2099
B
HOH
2100
5
HOH
HOH
2100
B
HOH
2101
5
HOH
HOH
2101
B
HOH
2102
5
HOH
HOH
2102
B
HOH
2103
5
HOH
HOH
2103
B
HOH
2001
5
HOH
HOH
2001
C
HOH
2002
5
HOH
HOH
2002
C
HOH
2004
5
HOH
HOH
2004
C
HOH
2005
5
HOH
HOH
2005
C
HOH
2006
5
HOH
HOH
2006
C
HOH
2007
5
HOH
HOH
2007
C
HOH
2008
5
HOH
HOH
2008
C
HOH
2001
5
HOH
HOH
2001
D
HOH
2002
5
HOH
HOH
2002
D
HOH
2003
5
HOH
HOH
2003
D
HOH
2004
5
HOH
HOH
2004
D
ALA
1
n
1
ALA
1
A
PRO
2
n
2
PRO
2
A
ILE
3
n
3
ILE
3
A
THR
4
n
4
THR
4
A
ALA
5
n
5
ALA
5
A
TYR
6
n
6
TYR
6
A
SER
7
n
7
SER
7
A
GLN
8
n
8
GLN
8
A
GLN
9
n
9
GLN
9
A
THR
10
n
10
THR
10
A
ARG
11
n
11
ARG
11
A
GLY
12
n
12
GLY
12
A
LEU
13
n
13
LEU
13
A
LEU
14
n
14
LEU
14
A
GLY
15
n
15
GLY
15
A
CYS
16
n
16
CYS
16
A
ILE
17
n
17
ILE
17
A
ILE
18
n
18
ILE
18
A
THR
19
n
19
THR
19
A
SER
20
n
20
SER
20
A
LEU
21
n
21
LEU
21
A
THR
22
n
22
THR
22
A
GLY
23
n
23
GLY
23
A
ARG
24
n
24
ARG
24
A
ASP
25
n
25
ASP
25
A
LYS
26
n
26
LYS
26
A
ASN
27
n
27
ASN
27
A
GLN
28
n
28
GLN
28
A
VAL
29
n
29
VAL
29
A
ASP
30
n
30
ASP
30
A
GLY
31
n
31
GLY
31
A
GLU
32
n
32
GLU
32
A
VAL
33
n
33
VAL
33
A
GLN
34
n
34
GLN
34
A
VAL
35
n
35
VAL
35
A
LEU
36
n
36
LEU
36
A
SER
37
n
37
SER
37
A
THR
38
n
38
THR
38
A
ALA
39
n
39
ALA
39
A
THR
40
n
40
THR
40
A
GLN
41
n
41
GLN
41
A
SER
42
n
42
SER
42
A
PHE
43
n
43
PHE
43
A
LEU
44
n
44
LEU
44
A
ALA
45
n
45
ALA
45
A
THR
46
n
46
THR
46
A
CYS
47
n
47
CYS
47
A
VAL
48
n
48
VAL
48
A
ASN
49
n
49
ASN
49
A
GLY
50
n
50
GLY
50
A
VAL
51
n
51
VAL
51
A
CYS
52
n
52
CYS
52
A
TRP
53
n
53
TRP
53
A
THR
54
n
54
THR
54
A
VAL
55
n
55
VAL
55
A
TYR
56
n
56
TYR
56
A
HIS
57
n
57
HIS
57
A
GLY
58
n
58
GLY
58
A
ALA
59
n
59
ALA
59
A
GLY
60
n
60
GLY
60
A
SER
61
n
61
SER
61
A
LYS
62
n
62
LYS
62
A
THR
63
n
63
THR
63
A
LEU
64
n
64
LEU
64
A
ALA
65
n
65
ALA
65
A
GLY
66
n
66
GLY
66
A
PRO
67
n
67
PRO
67
A
LYS
68
n
68
LYS
68
A
GLY
69
n
69
GLY
69
A
PRO
70
n
70
PRO
70
A
ILE
71
n
71
ILE
71
A
THR
72
n
72
THR
72
A
GLN
73
n
73
GLN
73
A
MET
74
n
74
MET
74
A
TYR
75
n
75
TYR
75
A
THR
76
n
76
THR
76
A
ASN
77
n
77
ASN
77
A
VAL
78
n
78
VAL
78
A
ASP
79
n
79
ASP
79
A
GLN
80
n
80
GLN
80
A
ASP
81
n
81
ASP
81
A
LEU
82
n
82
LEU
82
A
VAL
83
n
83
VAL
83
A
GLY
84
n
84
GLY
84
A
TRP
85
n
85
TRP
85
A
PRO
86
n
86
PRO
86
A
ALA
87
n
87
ALA
87
A
PRO
88
n
88
PRO
88
A
PRO
89
n
89
PRO
89
A
GLY
90
n
90
GLY
90
A
ALA
91
n
91
ALA
91
A
ARG
92
n
92
ARG
92
A
SER
93
n
93
SER
93
A
MET
94
n
94
MET
94
A
THR
95
n
95
THR
95
A
PRO
96
n
96
PRO
96
A
CYS
97
n
97
CYS
97
A
THR
98
n
98
THR
98
A
CYS
99
n
99
CYS
99
A
GLY
100
n
100
GLY
100
A
SER
101
n
101
SER
101
A
SER
102
n
102
SER
102
A
ASP
103
n
103
ASP
103
A
LEU
104
n
104
LEU
104
A
TYR
105
n
105
TYR
105
A
LEU
106
n
106
LEU
106
A
VAL
107
n
107
VAL
107
A
THR
108
n
108
THR
108
A
ARG
109
n
109
ARG
109
A
HIS
110
n
110
HIS
110
A
ALA
111
n
111
ALA
111
A
ASP
112
n
112
ASP
112
A
VAL
113
n
113
VAL
113
A
ILE
114
n
114
ILE
114
A
PRO
115
n
115
PRO
115
A
VAL
116
n
116
VAL
116
A
ARG
117
n
117
ARG
117
A
ARG
118
n
118
ARG
118
A
ARG
119
n
119
ARG
119
A
GLY
120
n
120
GLY
120
A
ASP
121
n
121
ASP
121
A
SER
122
n
122
SER
122
A
ARG
123
n
123
ARG
123
A
GLY
124
n
124
GLY
124
A
SER
125
n
125
SER
125
A
LEU
126
n
126
LEU
126
A
LEU
127
n
127
LEU
127
A
SER
128
n
128
SER
128
A
PRO
129
n
129
PRO
129
A
ARG
130
n
130
ARG
130
A
PRO
131
n
131
PRO
131
A
VAL
132
n
132
VAL
132
A
SER
133
n
133
SER
133
A
TYR
134
n
134
TYR
134
A
LEU
135
n
135
LEU
135
A
LYS
136
n
136
LYS
136
A
GLY
137
n
137
GLY
137
A
SER
138
n
138
SER
138
A
SER
139
n
139
SER
139
A
GLY
140
n
140
GLY
140
A
GLY
141
n
141
GLY
141
A
PRO
142
n
142
PRO
142
A
LEU
143
n
143
LEU
143
A
LEU
144
n
144
LEU
144
A
CYS
145
n
145
CYS
145
A
PRO
146
n
146
PRO
146
A
SER
147
n
147
SER
147
A
GLY
148
n
148
GLY
148
A
HIS
149
n
149
HIS
149
A
VAL
150
n
150
VAL
150
A
VAL
151
n
151
VAL
151
A
GLY
152
n
152
GLY
152
A
ILE
153
n
153
ILE
153
A
PHE
154
n
154
PHE
154
A
ARG
155
n
155
ARG
155
A
ALA
156
n
156
ALA
156
A
ALA
157
n
157
ALA
157
A
VAL
158
n
158
VAL
158
A
CYS
159
n
159
CYS
159
A
THR
160
n
160
THR
160
A
ARG
161
n
161
ARG
161
A
GLY
162
n
162
GLY
162
A
VAL
163
n
163
VAL
163
A
ALA
164
n
164
ALA
164
A
LYS
165
n
165
LYS
165
A
ALA
166
n
166
ALA
166
A
VAL
167
n
167
VAL
167
A
ASP
168
n
168
ASP
168
A
PHE
169
n
169
PHE
169
A
ILE
170
n
170
ILE
170
A
PRO
171
n
171
PRO
171
A
VAL
172
n
172
VAL
172
A
GLU
173
n
173
GLU
173
A
SER
174
n
174
SER
174
A
MET
175
n
175
MET
175
A
n
176
176
A
n
177
177
A
n
178
178
A
n
179
179
A
n
180
180
A
n
181
181
A
n
182
182
A
n
183
183
A
n
184
184
A
n
185
185
A
n
186
186
A
n
187
187
A
ALA
1
n
1
ALA
1
B
PRO
2
n
2
PRO
2
B
ILE
3
n
3
ILE
3
B
THR
4
n
4
THR
4
B
ALA
5
n
5
ALA
5
B
TYR
6
n
6
TYR
6
B
SER
7
n
7
SER
7
B
GLN
8
n
8
GLN
8
B
GLN
9
n
9
GLN
9
B
THR
10
n
10
THR
10
B
ARG
11
n
11
ARG
11
B
GLY
12
n
12
GLY
12
B
LEU
13
n
13
LEU
13
B
LEU
14
n
14
LEU
14
B
GLY
15
n
15
GLY
15
B
CYS
16
n
16
CYS
16
B
ILE
17
n
17
ILE
17
B
ILE
18
n
18
ILE
18
B
THR
19
n
19
THR
19
B
SER
20
n
20
SER
20
B
LEU
21
n
21
LEU
21
B
THR
22
n
22
THR
22
B
GLY
23
n
23
GLY
23
B
ARG
24
n
24
ARG
24
B
ASP
25
n
25
ASP
25
B
LYS
26
n
26
LYS
26
B
ASN
27
n
27
ASN
27
B
GLN
28
n
28
GLN
28
B
VAL
29
n
29
VAL
29
B
ASP
30
n
30
ASP
30
B
GLY
31
n
31
GLY
31
B
GLU
32
n
32
GLU
32
B
VAL
33
n
33
VAL
33
B
GLN
34
n
34
GLN
34
B
VAL
35
n
35
VAL
35
B
LEU
36
n
36
LEU
36
B
SER
37
n
37
SER
37
B
THR
38
n
38
THR
38
B
ALA
39
n
39
ALA
39
B
THR
40
n
40
THR
40
B
GLN
41
n
41
GLN
41
B
SER
42
n
42
SER
42
B
PHE
43
n
43
PHE
43
B
LEU
44
n
44
LEU
44
B
ALA
45
n
45
ALA
45
B
THR
46
n
46
THR
46
B
CYS
47
n
47
CYS
47
B
VAL
48
n
48
VAL
48
B
ASN
49
n
49
ASN
49
B
GLY
50
n
50
GLY
50
B
VAL
51
n
51
VAL
51
B
CYS
52
n
52
CYS
52
B
TRP
53
n
53
TRP
53
B
THR
54
n
54
THR
54
B
VAL
55
n
55
VAL
55
B
TYR
56
n
56
TYR
56
B
HIS
57
n
57
HIS
57
B
GLY
58
n
58
GLY
58
B
ALA
59
n
59
ALA
59
B
GLY
60
n
60
GLY
60
B
SER
61
n
61
SER
61
B
LYS
62
n
62
LYS
62
B
THR
63
n
63
THR
63
B
LEU
64
n
64
LEU
64
B
ALA
65
n
65
ALA
65
B
GLY
66
n
66
GLY
66
B
PRO
67
n
67
PRO
67
B
LYS
68
n
68
LYS
68
B
GLY
69
n
69
GLY
69
B
PRO
70
n
70
PRO
70
B
ILE
71
n
71
ILE
71
B
THR
72
n
72
THR
72
B
GLN
73
n
73
GLN
73
B
MET
74
n
74
MET
74
B
TYR
75
n
75
TYR
75
B
THR
76
n
76
THR
76
B
ASN
77
n
77
ASN
77
B
VAL
78
n
78
VAL
78
B
ASP
79
n
79
ASP
79
B
GLN
80
n
80
GLN
80
B
ASP
81
n
81
ASP
81
B
LEU
82
n
82
LEU
82
B
VAL
83
n
83
VAL
83
B
GLY
84
n
84
GLY
84
B
TRP
85
n
85
TRP
85
B
PRO
86
n
86
PRO
86
B
ALA
87
n
87
ALA
87
B
PRO
88
n
88
PRO
88
B
PRO
89
n
89
PRO
89
B
GLY
90
n
90
GLY
90
B
ALA
91
n
91
ALA
91
B
ARG
92
n
92
ARG
92
B
SER
93
n
93
SER
93
B
MET
94
n
94
MET
94
B
THR
95
n
95
THR
95
B
PRO
96
n
96
PRO
96
B
CYS
97
n
97
CYS
97
B
THR
98
n
98
THR
98
B
CYS
99
n
99
CYS
99
B
GLY
100
n
100
GLY
100
B
SER
101
n
101
SER
101
B
SER
102
n
102
SER
102
B
ASP
103
n
103
ASP
103
B
LEU
104
n
104
LEU
104
B
TYR
105
n
105
TYR
105
B
LEU
106
n
106
LEU
106
B
VAL
107
n
107
VAL
107
B
THR
108
n
108
THR
108
B
ARG
109
n
109
ARG
109
B
HIS
110
n
110
HIS
110
B
ALA
111
n
111
ALA
111
B
ASP
112
n
112
ASP
112
B
VAL
113
n
113
VAL
113
B
ILE
114
n
114
ILE
114
B
PRO
115
n
115
PRO
115
B
VAL
116
n
116
VAL
116
B
ARG
117
n
117
ARG
117
B
ARG
118
n
118
ARG
118
B
ARG
119
n
119
ARG
119
B
GLY
120
n
120
GLY
120
B
ASP
121
n
121
ASP
121
B
SER
122
n
122
SER
122
B
ARG
123
n
123
ARG
123
B
GLY
124
n
124
GLY
124
B
SER
125
n
125
SER
125
B
LEU
126
n
126
LEU
126
B
LEU
127
n
127
LEU
127
B
SER
128
n
128
SER
128
B
PRO
129
n
129
PRO
129
B
ARG
130
n
130
ARG
130
B
PRO
131
n
131
PRO
131
B
VAL
132
n
132
VAL
132
B
SER
133
n
133
SER
133
B
TYR
134
n
134
TYR
134
B
LEU
135
n
135
LEU
135
B
LYS
136
n
136
LYS
136
B
GLY
137
n
137
GLY
137
B
SER
138
n
138
SER
138
B
SER
139
n
139
SER
139
B
GLY
140
n
140
GLY
140
B
GLY
141
n
141
GLY
141
B
PRO
142
n
142
PRO
142
B
LEU
143
n
143
LEU
143
B
LEU
144
n
144
LEU
144
B
CYS
145
n
145
CYS
145
B
PRO
146
n
146
PRO
146
B
SER
147
n
147
SER
147
B
GLY
148
n
148
GLY
148
B
HIS
149
n
149
HIS
149
B
VAL
150
n
150
VAL
150
B
VAL
151
n
151
VAL
151
B
GLY
152
n
152
GLY
152
B
ILE
153
n
153
ILE
153
B
PHE
154
n
154
PHE
154
B
ARG
155
n
155
ARG
155
B
ALA
156
n
156
ALA
156
B
ALA
157
n
157
ALA
157
B
VAL
158
n
158
VAL
158
B
CYS
159
n
159
CYS
159
B
THR
160
n
160
THR
160
B
ARG
161
n
161
ARG
161
B
GLY
162
n
162
GLY
162
B
VAL
163
n
163
VAL
163
B
ALA
164
n
164
ALA
164
B
LYS
165
n
165
LYS
165
B
ALA
166
n
166
ALA
166
B
VAL
167
n
167
VAL
167
B
ASP
168
n
168
ASP
168
B
PHE
169
n
169
PHE
169
B
ILE
170
n
170
ILE
170
B
PRO
171
n
171
PRO
171
B
VAL
172
n
172
VAL
172
B
GLU
173
n
173
GLU
173
B
SER
174
n
174
SER
174
B
MET
175
n
175
MET
175
B
n
176
176
B
n
177
177
B
n
178
178
B
n
179
179
B
n
180
180
B
n
181
181
B
n
182
182
B
n
183
183
B
n
184
184
B
n
185
185
B
n
186
186
B
n
187
187
B
n
1
220
C
GLY
221
n
2
GLY
221
C
SER
222
n
3
SER
222
C
VAL
223
n
4
VAL
223
C
VAL
224
n
5
VAL
224
C
ILE
225
n
6
ILE
225
C
VAL
226
n
7
VAL
226
C
GLY
227
n
8
GLY
227
C
ARG
228
n
9
ARG
228
C
ILE
229
n
10
ILE
229
C
ILE
230
n
11
ILE
230
C
LEU
231
n
12
LEU
231
C
SER
232
n
13
SER
232
C
n
14
233
C
n
15
234
C
n
16
235
C
n
1
220
D
GLY
221
n
2
GLY
221
D
SER
222
n
3
SER
222
D
VAL
223
n
4
VAL
223
D
VAL
224
n
5
VAL
224
D
ILE
225
n
6
ILE
225
D
VAL
226
n
7
VAL
226
D
GLY
227
n
8
GLY
227
D
ARG
228
n
9
ARG
228
D
ILE
229
n
10
ILE
229
D
ILE
230
n
11
ILE
230
D
LEU
231
n
12
LEU
231
D
SER
232
n
13
SER
232
D
n
14
233
D
n
15
234
D
n
16
235
D
software_defined_assembly
PQS
2
dimeric
software_defined_assembly
PQS
2
dimeric
4770
-19.4
10070
4820
-22.4
10050
B
CYS
97
B
SG
CYS
97
1_555
B
ZN
300
G
ZN
ZN
1_555
B
CYS
99
B
SG
CYS
99
1_555
89.5
B
CYS
97
B
SG
CYS
97
1_555
B
ZN
300
G
ZN
ZN
1_555
B
CYS
145
B
SG
CYS
145
1_555
106.5
B
CYS
99
B
SG
CYS
99
1_555
B
ZN
300
G
ZN
ZN
1_555
B
CYS
145
B
SG
CYS
145
1_555
115.0
B
CYS
97
B
SG
CYS
97
1_555
B
ZN
300
G
ZN
ZN
1_555
B
HOH
2098
I
O
HOH
1_555
118.6
B
CYS
99
B
SG
CYS
99
1_555
B
ZN
300
G
ZN
ZN
1_555
B
HOH
2098
I
O
HOH
1_555
111.2
B
CYS
145
B
SG
CYS
145
1_555
B
ZN
300
G
ZN
ZN
1_555
B
HOH
2098
I
O
HOH
1_555
113.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
C
N
ILE
229
C
N
ILE
10
A
O
VAL
33
A
O
VAL
33
A
N
LEU
36
A
N
LEU
36
A
O
PHE
43
A
O
PHE
43
A
N
VAL
48
A
N
VAL
48
A
O
VAL
51
A
O
VAL
51
A
N
THR
54
A
N
THR
54
A
O
VAL
83
A
O
VAL
83
A
N
GLY
84
A
N
GLY
84
A
O
TYR
75
A
O
TYR
75
A
N
GLY
66
A
N
GLY
66
A
O
GLY
69
A
O
GLY
69
A
N
LEU
106
A
N
LEU
106
A
O
ILE
114
A
O
ILE
114
A
N
ARG
119
A
N
ARG
119
A
O
ARG
123
A
O
ARG
123
A
N
ARG
130
A
N
ARG
130
A
O
ALA
164
A
O
ALA
164
A
N
ILE
170
A
N
ILE
170
A
O
ILE
153
A
O
ILE
153
A
N
VAL
151
A
N
VAL
151
A
O
LEU
143
A
O
LEU
143
A
N
LEU
144
A
N
LEU
144
A
O
TYR
105
A
O
TYR
105
B
N
GLN
8
B
N
GLN
8
D
O
ARG
228
D
O
ARG
9
D
N
ILE
229
D
N
ILE
10
B
O
VAL
33
B
O
VAL
33
B
N
LEU
36
B
N
LEU
36
B
O
PHE
43
B
O
PHE
43
B
N
VAL
48
B
N
VAL
48
B
O
VAL
51
B
O
VAL
51
B
N
THR
54
B
N
THR
54
B
O
VAL
83
B
O
VAL
83
B
N
GLY
84
B
N
GLY
84
B
O
TYR
75
B
O
TYR
75
B
N
LEU
106
B
N
LEU
106
B
O
ILE
114
B
O
ILE
114
B
N
ARG
117
B
N
ARG
117
B
O
SER
125
B
O
SER
125
B
N
ARG
130
B
N
ARG
130
B
O
ALA
164
B
O
ALA
164
B
N
ILE
170
B
N
ILE
170
B
O
ILE
153
B
O
ILE
153
B
N
VAL
151
B
N
VAL
151
B
O
LEU
143
B
O
LEU
143
B
N
LEU
144
B
N
LEU
144
B
O
TYR
105
B
O
TYR
105
1
A
GLU
176
A
GLU
176
1
Y
1
A
THR
177
A
THR
177
1
Y
1
A
THR
178
A
THR
178
1
Y
1
A
MET
179
A
MET
179
1
Y
1
A
ARG
180
A
ARG
180
1
Y
1
A
SER
181
A
SER
181
1
Y
1
A
PRO
182
A
PRO
182
1
Y
1
A
VAL
183
A
VAL
183
1
Y
1
A
PHE
184
A
PHE
184
1
Y
1
A
THR
185
A
THR
185
1
Y
1
A
ASP
186
A
ASP
186
1
Y
1
A
ASN
187
A
ASN
187
1
Y
1
B
GLU
176
B
GLU
176
1
Y
1
B
THR
177
B
THR
177
1
Y
1
B
THR
178
B
THR
178
1
Y
1
B
MET
179
B
MET
179
1
Y
1
B
ARG
180
B
ARG
180
1
Y
1
B
SER
181
B
SER
181
1
Y
1
B
PRO
182
B
PRO
182
1
Y
1
B
VAL
183
B
VAL
183
1
Y
1
B
PHE
184
B
PHE
184
1
Y
1
B
THR
185
B
THR
185
1
Y
1
B
ASP
186
B
ASP
186
1
Y
1
B
ASN
187
B
ASN
187
1
Y
1
C
LYS
220
C
LYS
1
1
Y
1
C
GLY
233
C
GLY
14
1
Y
1
C
ARG
234
C
ARG
15
1
Y
1
C
LYS
235
C
LYS
16
1
Y
1
D
LYS
220
D
LYS
1
1
Y
1
D
GLY
233
D
GLY
14
1
Y
1
D
ARG
234
D
ARG
15
1
Y
1
D
LYS
235
D
LYS
16
1
Y
1
A
CA2
2ZF
401
WRONG HAND
1
B
B
OH
NE2
TYR
GLN
75
80
2.15
1
B
TRP
53
-10.39
1
B
VAL
158
11.38
1
3.64
0.50
120.30
123.94
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
11
11
11
N
1
3.26
0.50
120.30
123.56
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
109
109
109
N
1
-5.23
0.50
120.30
115.07
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
117
117
117
N
1
10.93
1.40
123.60
134.53
A
A
A
CD
NE
CZ
ARG
ARG
ARG
118
118
118
N
1
7.06
0.50
120.30
127.36
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
118
118
118
N
1
-3.78
0.50
120.30
116.52
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
118
118
118
N
1
4.52
0.50
120.30
124.82
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
123
123
123
N
1
-8.84
1.40
123.60
114.76
A
A
A
CD
NE
CZ
ARG
ARG
ARG
130
130
130
N
1
-8.03
0.50
120.30
112.27
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
130
130
130
N
1
8.26
0.50
120.30
128.56
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
130
130
130
N
1
10.68
1.40
123.60
134.28
A
A
A
CD
NE
CZ
ARG
ARG
ARG
155
155
155
N
1
-3.95
0.50
120.30
116.35
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
155
155
155
N
1
-3.89
0.60
121.00
117.11
B
B
B
CB
CG
CD2
TYR
TYR
TYR
75
75
75
N
1
-3.85
0.50
120.30
116.45
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
109
109
109
N
1
5.45
0.50
120.30
125.75
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
109
109
109
N
1
-6.14
0.50
120.30
114.16
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
130
130
130
N
1
-4.69
0.50
120.30
115.61
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
155
155
155
N
1
-4.05
0.50
120.30
116.25
C
C
C
NE
CZ
NH2
ARG
ARG
ARG
228
228
228
N
1
A
THR
98
78.55
-50.30
43.50
0.275
0.213
0.207
2.10
20.00
1224
23960
5.000
98.2
3.620
0.097
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.220
0.210
PDB ENTRY 1DY7
2.10
20.00
213
3018
71
0
2734
0.010
0.020
0.030
0.040
0.030
0.050
2.900
2.000
4.180
3.000
3.770
2.000
5.490
3.000
0.012
0.020
0.125
0.150
0.193
0.300
0.278
0.300
0.201
0.300
6.700
7.000
20.500
15.000
26.400
20.000
37.40
2.100
20.000
1DY9
23960
-3.000
0.03500
1
32.0000
2.800
98.2
2.10
2.14
3.200
0.1500
1
2.10
98.4
refinement
REFMAC
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
Inhibition of the Hepatitis C Virus NS3/4A Protease. The Crystal Structures of Two Protease-Inhibitor Complexes (inhibitor I)
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
A
GLY
12
A
GLY
12
HELX_P
A
GLY
23
A
GLY
23
1
1
12
A
TYR
56
A
TYR
56
HELX_P
A
GLY
60
A
GLY
60
1
2
5
A
SER
133
A
SER
133
HELX_P
A
LEU
135
A
LEU
135
5
3
3
A
GLU
173
A
GLU
173
HELX_P
A
MET
175
A
MET
175
5
4
3
B
GLY
12
B
GLY
12
HELX_P
B
GLY
23
B
GLY
23
1
5
12
B
TYR
56
B
TYR
56
HELX_P
B
GLY
60
B
GLY
60
1
6
5
B
VAL
132
B
VAL
132
HELX_P
B
LYS
136
B
LYS
136
1
7
5
covale
1.432
none
A
SER
139
A
OG
SER
139
1_555
A
2ZF
401
E
C6
2ZF
1_555
covale
1.442
none
B
SER
139
B
OG
SER
139
1_555
B
2ZF
401
F
C6
2ZF
1_555
metalc
2.655
B
CYS
97
B
SG
CYS
97
1_555
B
ZN
300
G
ZN
ZN
1_555
metalc
2.819
B
CYS
99
B
SG
CYS
99
1_555
B
ZN
300
G
ZN
ZN
1_555
metalc
2.665
B
CYS
145
B
SG
CYS
145
1_555
B
ZN
300
G
ZN
ZN
1_555
metalc
2.612
B
ZN
300
G
ZN
ZN
1_555
B
HOH
2098
I
O
HOH
1_555
HYDROLASE/HYDROLASE INHIBITOR
SERINE PROTEASE, NS3, NS4A, HEPATITIS C VIRUS, PROTEASE INHIBITION, HYDROLASE-HYDROLASE INHIBITOR COMPLEX
given
0.372400
0.928070
-0.002600
0.928060
-0.372410
-0.003230
-0.003960
-0.001210
-0.999990
12.21626
-5.75718
14.19541
Q81755
UNP
1
Q81755
Q81755
UNP
2
Q81755
305
491
1DY9
1
187
Q81755
A
1
1
187
305
491
1DY9
1
187
Q81755
B
1
1
187
955
970
1DY9
220
235
Q81755
C
2
1
16
955
970
1DY9
220
235
Q81755
D
2
1
16
3
THR
engineered mutation
LYS
220
1DY9
C
Q81755
UNP
955
1
3
PRO
engineered mutation
LYS
235
1DY9
C
Q81755
UNP
970
16
4
THR
engineered mutation
LYS
220
1DY9
D
Q81755
UNP
955
1
4
PRO
engineered mutation
LYS
235
1DY9
D
Q81755
UNP
970
16
7
2
7
7
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
4
A
THR
4
A
GLN
9
A
GLN
9
C
VAL
224
C
VAL
5
C
SER
232
C
SER
13
A
VAL
33
A
VAL
33
A
SER
37
A
SER
37
A
SER
42
A
SER
42
A
VAL
48
A
VAL
48
A
VAL
51
A
VAL
51
A
VAL
55
A
VAL
55
A
LEU
82
A
LEU
82
A
PRO
86
A
PRO
86
A
TYR
75
A
TYR
75
A
ASN
77
A
ASN
77
A
LEU
64
A
LEU
64
A
GLY
66
A
GLY
66
A
GLY
69
A
GLY
69
A
ILE
71
A
ILE
71
A
ASP
103
A
ASP
103
A
VAL
107
A
VAL
107
A
VAL
113
A
VAL
113
A
GLY
120
A
GLY
120
A
ARG
123
A
ARG
123
A
PRO
131
A
PRO
131
A
VAL
163
A
VAL
163
A
PRO
171
A
PRO
171
A
VAL
150
A
VAL
150
A
THR
160
A
THR
160
A
PRO
142
A
PRO
142
A
LEU
144
A
LEU
144
A
ASP
103
A
ASP
103
A
VAL
107
A
VAL
107
B
ALA
5
B
ALA
5
B
GLN
9
B
GLN
9
D
VAL
224
D
VAL
5
D
LEU
231
D
LEU
12
B
VAL
33
B
VAL
33
B
SER
37
B
SER
37
B
SER
42
B
SER
42
B
VAL
48
B
VAL
48
B
VAL
51
B
VAL
51
B
VAL
55
B
VAL
55
B
LEU
82
B
LEU
82
B
PRO
86
B
PRO
86
B
TYR
75
B
TYR
75
B
ASN
77
B
ASN
77
B
ASP
103
B
ASP
103
B
VAL
107
B
VAL
107
B
VAL
113
B
VAL
113
B
ARG
118
B
ARG
118
B
ARG
123
B
ARG
123
B
PRO
131
B
PRO
131
B
VAL
163
B
VAL
163
B
PRO
171
B
PRO
171
B
VAL
150
B
VAL
150
B
THR
160
B
THR
160
B
PRO
142
B
PRO
142
B
LEU
144
B
LEU
144
B
ASP
103
B
ASP
103
B
VAL
107
B
VAL
107
BINDING SITE FOR RESIDUE 2ZF A 401
A
2ZF
401
Software
13
BINDING SITE FOR RESIDUE 2ZF B 401
B
2ZF
401
Software
13
BINDING SITE FOR RESIDUE ZN B 300
B
ZN
300
Software
4
A
SER
42
A
SER
42
13
1_555
A
HIS
57
A
HIS
57
13
1_555
A
LYS
136
A
LYS
136
13
1_555
A
GLY
137
A
GLY
137
13
1_555
A
SER
138
A
SER
138
13
1_555
A
SER
139
A
SER
139
13
1_555
A
PHE
154
A
PHE
154
13
1_555
A
ARG
155
A
ARG
155
13
1_555
A
ALA
156
A
ALA
156
13
1_555
A
ALA
157
A
ALA
157
13
1_555
A
CYS
159
A
CYS
159
13
1_555
A
HOH
2027
H
HOH
13
1_555
A
HOH
2098
H
HOH
13
1_555
B
SER
42
B
SER
42
13
1_555
B
HIS
57
B
HIS
57
13
1_555
B
VAL
132
B
VAL
132
13
1_555
B
LYS
136
B
LYS
136
13
1_555
B
GLY
137
B
GLY
137
13
1_555
B
SER
138
B
SER
138
13
1_555
B
SER
139
B
SER
139
13
1_555
B
PHE
154
B
PHE
154
13
1_555
B
ARG
155
B
ARG
155
13
1_555
B
ALA
156
B
ALA
156
13
1_555
B
ALA
157
B
ALA
157
13
1_555
B
HOH
2102
I
HOH
13
1_555
B
HOH
2103
I
HOH
13
1_555
B
CYS
97
B
CYS
97
4
1_555
B
CYS
99
B
CYS
99
4
1_555
B
CYS
145
B
CYS
145
4
1_555
B
HOH
2098
I
HOH
4
1_555
169
P 61