0.016942
0.009782
0.000000
0.000000
0.019563
0.000000
0.000000
0.000000
0.014932
0.00000
0.00000
0.00000
Lewis, R.J.
Brannigan, J.A.
Muchova, K.
Leonard, G.
Barak, I.
Wilkinson, A.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
59.024
59.024
66.970
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J. Mol. Biol.
JMOBAK
0070
0022-2836
297
757
770
10.1006/jmbi.2000.3598
10731426
Domain swapping in the sporulation response regulator Spo0A.
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110.0
1
CCD
1998-12-15
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
0.93
1.0
ID14-4
ESRF
0.93
SYNCHROTRON
ESRF BEAMLINE ID14-4
14745.070
Stage 0 sporulation protein A
RECEIVER DOMAIN
1
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
95
nat
water
no
no
MSIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNV
IMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGKTTPVVRK
MSIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNV
IMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGKTTPVVRK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Bacillus stearothermophilus
sample
1
130
CYTOPLASM
spo0A
1422
Geobacillus stearothermophilus
CYTOPLASM
SPO0A
562
ESCHERICHIA COLI
B834
Biological sequence
PET
1
2.7
50
4.00
10 % PEG 4000, 100 MM LITHIUM SULPHATE 100 MM SODIUM ACETATE, PH 4.0
citation
entity
entity_src_gen
pdbx_unobs_or_zero_occ_atoms
struct_ref
struct_ref_seq
repository
Initial release
Version format compliance
Version format compliance
Advisory
Data collection
Database references
Source and taxonomy
Structure summary
1
0
2000-04-10
1
1
2011-05-07
1
2
2011-07-13
1
3
2018-06-20
_citation.journal_abbrev
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.title
_entity.pdbx_description
_entity_src_gen.gene_src_common_name
_entity_src_gen.pdbx_beg_seq_num
_entity_src_gen.pdbx_end_seq_num
_entity_src_gen.pdbx_gene_src_gene
_entity_src_gen.pdbx_gene_src_scientific_name
_entity_src_gen.pdbx_seq_type
_struct_ref.db_code
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_seq_one_letter_code
_struct_ref_seq.pdbx_db_accession
PDBE
Y
PDBE
2000-02-15
REL
SO4
SULFATE ION
HOH
water
N-TERMINAL DOMAIN ONLY, RESIDUES 1 - 130
SO4
1
2
SO4
SO4
201
A
HOH
2031
3
HOH
HOH
301
A
HOH
2055
3
HOH
HOH
302
A
HOH
2077
3
HOH
HOH
303
A
HOH
2047
3
HOH
HOH
304
A
HOH
2066
3
HOH
HOH
305
A
HOH
2005
3
HOH
HOH
306
A
HOH
2007
3
HOH
HOH
307
A
HOH
2068
3
HOH
HOH
308
A
HOH
2036
3
HOH
HOH
309
A
HOH
2063
3
HOH
HOH
310
A
HOH
2034
3
HOH
HOH
311
A
HOH
2035
3
HOH
HOH
312
A
HOH
2015
3
HOH
HOH
313
A
HOH
2008
3
HOH
HOH
314
A
HOH
2062
3
HOH
HOH
315
A
HOH
2052
3
HOH
HOH
316
A
HOH
2088
3
HOH
HOH
317
A
HOH
2001
3
HOH
HOH
318
A
HOH
2080
3
HOH
HOH
319
A
HOH
2082
3
HOH
HOH
320
A
HOH
2079
3
HOH
HOH
321
A
HOH
2084
3
HOH
HOH
322
A
HOH
2065
3
HOH
HOH
323
A
HOH
2002
3
HOH
HOH
324
A
HOH
2021
3
HOH
HOH
325
A
HOH
2016
3
HOH
HOH
326
A
HOH
2073
3
HOH
HOH
327
A
HOH
2056
3
HOH
HOH
328
A
HOH
2054
3
HOH
HOH
329
A
HOH
2042
3
HOH
HOH
330
A
HOH
2017
3
HOH
HOH
331
A
HOH
2048
3
HOH
HOH
332
A
HOH
2046
3
HOH
HOH
333
A
HOH
2027
3
HOH
HOH
334
A
HOH
2045
3
HOH
HOH
335
A
HOH
2067
3
HOH
HOH
336
A
HOH
2057
3
HOH
HOH
337
A
HOH
2025
3
HOH
HOH
338
A
HOH
2093
3
HOH
HOH
339
A
HOH
2086
3
HOH
HOH
340
A
HOH
2039
3
HOH
HOH
341
A
HOH
2051
3
HOH
HOH
342
A
HOH
2049
3
HOH
HOH
343
A
HOH
2076
3
HOH
HOH
344
A
HOH
2033
3
HOH
HOH
345
A
HOH
2014
3
HOH
HOH
346
A
HOH
2064
3
HOH
HOH
347
A
HOH
2043
3
HOH
HOH
348
A
HOH
2030
3
HOH
HOH
349
A
HOH
2037
3
HOH
HOH
350
A
HOH
2011
3
HOH
HOH
351
A
HOH
2013
3
HOH
HOH
352
A
HOH
2053
3
HOH
HOH
353
A
HOH
2078
3
HOH
HOH
354
A
HOH
2050
3
HOH
HOH
355
A
HOH
2018
3
HOH
HOH
356
A
HOH
2075
3
HOH
HOH
357
A
HOH
2087
3
HOH
HOH
358
A
HOH
2092
3
HOH
HOH
359
A
HOH
2040
3
HOH
HOH
360
A
HOH
2006
3
HOH
HOH
361
A
HOH
2085
3
HOH
HOH
362
A
HOH
2081
3
HOH
HOH
363
A
HOH
2060
3
HOH
HOH
364
A
HOH
2022
3
HOH
HOH
365
A
HOH
2074
3
HOH
HOH
366
A
HOH
2091
3
HOH
HOH
367
A
HOH
2090
3
HOH
HOH
368
A
HOH
2059
3
HOH
HOH
369
A
HOH
2032
3
HOH
HOH
370
A
HOH
2023
3
HOH
HOH
371
A
HOH
2001
3
HOH
HOH
372
A
HOH
2089
3
HOH
HOH
373
A
HOH
2061
3
HOH
HOH
374
A
HOH
2024
3
HOH
HOH
375
A
HOH
2083
3
HOH
HOH
376
A
HOH
2029
3
HOH
HOH
377
A
HOH
2070
3
HOH
HOH
378
A
HOH
2012
3
HOH
HOH
379
A
HOH
2058
3
HOH
HOH
380
A
HOH
2002
3
HOH
HOH
381
A
HOH
2071
3
HOH
HOH
382
A
HOH
2026
3
HOH
HOH
383
A
HOH
2009
3
HOH
HOH
384
A
HOH
2044
3
HOH
HOH
385
A
HOH
2041
3
HOH
HOH
386
A
HOH
2004
3
HOH
HOH
387
A
HOH
2019
3
HOH
HOH
388
A
HOH
2072
3
HOH
HOH
389
A
HOH
2069
3
HOH
HOH
390
A
HOH
2010
3
HOH
HOH
391
A
HOH
2038
3
HOH
HOH
392
A
HOH
2028
3
HOH
HOH
393
A
HOH
2003
3
HOH
HOH
394
A
HOH
2020
3
HOH
HOH
395
A
n
1
1
A
SER
2
n
2
SER
2
A
ILE
3
n
3
ILE
3
A
LYS
4
n
4
LYS
4
A
VAL
5
n
5
VAL
5
A
CYS
6
n
6
CYS
6
A
ILE
7
n
7
ILE
7
A
ALA
8
n
8
ALA
8
A
ASP
9
n
9
ASP
9
A
ASP
10
n
10
ASP
10
A
ASN
11
n
11
ASN
11
A
ARG
12
n
12
ARG
12
A
GLU
13
n
13
GLU
13
A
LEU
14
n
14
LEU
14
A
VAL
15
n
15
VAL
15
A
SER
16
n
16
SER
16
A
LEU
17
n
17
LEU
17
A
LEU
18
n
18
LEU
18
A
ASP
19
n
19
ASP
19
A
GLU
20
n
20
GLU
20
A
TYR
21
n
21
TYR
21
A
ILE
22
n
22
ILE
22
A
SER
23
n
23
SER
23
A
SER
24
n
24
SER
24
A
GLN
25
n
25
GLN
25
A
PRO
26
n
26
PRO
26
A
ASP
27
n
27
ASP
27
A
MET
28
n
28
MET
28
A
GLU
29
n
29
GLU
29
A
VAL
30
n
30
VAL
30
A
ILE
31
n
31
ILE
31
A
GLY
32
n
32
GLY
32
A
THR
33
n
33
THR
33
A
ALA
34
n
34
ALA
34
A
TYR
35
n
35
TYR
35
A
ASN
36
n
36
ASN
36
A
GLY
37
n
37
GLY
37
A
GLN
38
n
38
GLN
38
A
ASP
39
n
39
ASP
39
A
CYS
40
n
40
CYS
40
A
LEU
41
n
41
LEU
41
A
GLN
42
n
42
GLN
42
A
MET
43
n
43
MET
43
A
LEU
44
n
44
LEU
44
A
GLU
45
n
45
GLU
45
A
GLU
46
n
46
GLU
46
A
LYS
47
n
47
LYS
47
A
ARG
48
n
48
ARG
48
A
PRO
49
n
49
PRO
49
A
ASP
50
n
50
ASP
50
A
ILE
51
n
51
ILE
51
A
LEU
52
n
52
LEU
52
A
LEU
53
n
53
LEU
53
A
LEU
54
n
54
LEU
54
A
ASP
55
n
55
ASP
55
A
ILE
56
n
56
ILE
56
A
ILE
57
n
57
ILE
57
A
MET
58
n
58
MET
58
A
PRO
59
n
59
PRO
59
A
HIS
60
n
60
HIS
60
A
LEU
61
n
61
LEU
61
A
ASP
62
n
62
ASP
62
A
GLY
63
n
63
GLY
63
A
LEU
64
n
64
LEU
64
A
ALA
65
n
65
ALA
65
A
VAL
66
n
66
VAL
66
A
LEU
67
n
67
LEU
67
A
GLU
68
n
68
GLU
68
A
ARG
69
n
69
ARG
69
A
ILE
70
n
70
ILE
70
A
ARG
71
n
71
ARG
71
A
ALA
72
n
72
ALA
72
A
GLY
73
n
73
GLY
73
A
PHE
74
n
74
PHE
74
A
GLU
75
n
75
GLU
75
A
HIS
76
n
76
HIS
76
A
GLN
77
n
77
GLN
77
A
PRO
78
n
78
PRO
78
A
ASN
79
n
79
ASN
79
A
VAL
80
n
80
VAL
80
A
ILE
81
n
81
ILE
81
A
MET
82
n
82
MET
82
A
LEU
83
n
83
LEU
83
A
THR
84
n
84
THR
84
A
ALA
85
n
85
ALA
85
A
PHE
86
n
86
PHE
86
A
GLY
87
n
87
GLY
87
A
GLN
88
n
88
GLN
88
A
GLU
89
n
89
GLU
89
A
ASP
90
n
90
ASP
90
A
VAL
91
n
91
VAL
91
A
THR
92
n
92
THR
92
A
LYS
93
n
93
LYS
93
A
LYS
94
n
94
LYS
94
A
ALA
95
n
95
ALA
95
A
VAL
96
n
96
VAL
96
A
GLU
97
n
97
GLU
97
A
LEU
98
n
98
LEU
98
A
GLY
99
n
99
GLY
99
A
ALA
100
n
100
ALA
100
A
SER
101
n
101
SER
101
A
TYR
102
n
102
TYR
102
A
PHE
103
n
103
PHE
103
A
ILE
104
n
104
ILE
104
A
LEU
105
n
105
LEU
105
A
LYS
106
n
106
LYS
106
A
PRO
107
n
107
PRO
107
A
PHE
108
n
108
PHE
108
A
ASP
109
n
109
ASP
109
A
MET
110
n
110
MET
110
A
GLU
111
n
111
GLU
111
A
ASN
112
n
112
ASN
112
A
LEU
113
n
113
LEU
113
A
ALA
114
n
114
ALA
114
A
HIS
115
n
115
HIS
115
A
HIS
116
n
116
HIS
116
A
ILE
117
n
117
ILE
117
A
ARG
118
n
118
ARG
118
A
GLN
119
n
119
GLN
119
A
VAL
120
n
120
VAL
120
A
TYR
121
n
121
TYR
121
A
GLY
122
n
122
GLY
122
A
LYS
123
n
123
LYS
123
A
THR
124
n
124
THR
124
A
n
125
125
A
n
126
126
A
n
127
127
A
n
128
128
A
n
129
129
A
n
130
130
A
software_defined_assembly
PQS
2
dimeric
4000
-39.8
15560
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
101
A
O
SER
101
A
N
MET
82
A
N
MET
82
A
O
ASN
79
A
O
ASN
79
A
N
LEU
52
A
N
LEU
52
A
O
ILE
51
A
O
ILE
51
A
N
CYS
6
A
N
CYS
6
A
O
ILE
3
A
O
ILE
3
A
N
GLU
29
A
N
GLU
29
1
A
MET
1
A
MET
1
1
Y
1
A
THR
125
A
THR
125
1
Y
1
A
PRO
126
A
PRO
126
1
Y
1
A
VAL
127
A
VAL
127
1
Y
1
A
VAL
128
A
VAL
128
1
Y
1
A
ARG
129
A
ARG
129
1
Y
1
A
LYS
130
A
LYS
130
1
Y
1
-25.65
2.70
114.20
88.55
A
A
A
CB
CG
CD
GLU
GLU
GLU
13
13
13
N
1
14.84
2.00
118.30
133.14
A
A
A
CG
CD
OE1
GLU
GLU
GLU
13
13
13
N
1
-14.62
2.00
118.30
103.68
A
A
A
CG
CD
OE2
GLU
GLU
GLU
13
13
13
N
1
6.05
0.90
118.30
124.35
A
A
A
CB
CG
OD1
ASP
ASP
ASP
19
19
19
N
1
-5.96
0.90
118.30
112.34
A
A
A
CB
CG
OD2
ASP
ASP
ASP
19
19
19
N
1
12.14
1.70
113.30
125.44
A
A
A
CA
CB
CG
MET
MET
MET
43
43
43
A
N
1
6.22
0.90
118.30
124.52
A
A
A
CB
CG
OD2
ASP
ASP
ASP
50
50
50
N
1
13.01
1.70
113.30
126.31
A
A
A
CA
CB
CG
MET
MET
MET
82
82
82
A
N
1
-10.50
0.90
118.30
107.80
A
A
A
CB
CG
OD1
ASP
ASP
ASP
90
90
90
N
1
10.39
0.90
118.30
128.69
A
A
A
CB
CG
OD2
ASP
ASP
ASP
90
90
90
N
1
-4.46
0.70
120.80
116.34
A
A
A
CB
CG
CD1
PHE
PHE
PHE
103
103
103
N
1
3.02
0.50
120.30
123.32
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
118
118
118
N
1
23.74
2.20
113.40
137.14
A
A
A
CA
CB
CG
LYS
LYS
LYS
123
123
123
N
1
A
A
CG
CD
GLU
GLU
13
13
0.253
0.015
1.515
1.768
N
1
A
A
CG
CD
GLU
GLU
29
29
-0.243
0.015
1.515
1.272
N
1
A
A
CB
CG
ASP
ASP
90
90
-0.132
0.021
1.513
1.381
N
1
A
A
CB
CG
LYS
LYS
123
123
-0.328
0.027
1.521
1.193
N
1
A
ARG
48
38.99
67.11
1
A
HIS
60
69.97
-57.09
1
A
ASN
112
80.07
2.32
34.031
0.26593
0.20774
0.23538
1.65
28
843
15811
5.0
99.4
2.04504
0.07071
RANDOM
1
THROUGHOUT
0.0
MAD
0.10422
0.11453
1.65
28
95
1074
5
0
974
0.016
0.02
0.033
0.04
0.042
0.05
2.660
3.000
3.812
5.00
4.395
6.000
5.607
8.000
0.0242
0.03
0.127
0.150
0.19
0.3
0.264
0.3
0
0.3
0.098
0.3
4.7
7.0
14.8
15.0
16.7
20.0
0
15
29.133
1.650
28.000
1DZ3
16570
0.05600
1
24.8000
8.700
99.4
1.65
1.71
3.800
0.26800
1
3.40
99.3
refinement
REFMAC
data reduction
DENZO
data scaling
SCALEPACK
phasing
SOLVE
STAGE 0 SPORULATION PROTEIN A
DOMAIN-SWAPPING IN THE SPORULATION RESPONSE REGULATOR SPO0A
1
N
N
2
N
N
3
N
N
BIOMOLECULEDIMER CRYSTALLISED AROUND
CRYSTALLOGRAPHIC TWO-FOLDBIOLOGICAL_UNIT: DIMERIC
A
ASN
11
A
ASN
11
HELX_P
A
SER
24
A
SER
24
1
1
14
A
ASN
36
A
ASN
36
HELX_P
A
ARG
48
A
ARG
48
1
2
13
A
ASP
62
A
ASP
62
HELX_P
A
PHE
74
A
PHE
74
1
3
13
A
GLN
88
A
GLN
88
HELX_P
A
LEU
98
A
LEU
98
1
4
11
A
ASN
112
A
ASN
112
HELX_P
A
LYS
123
A
LYS
123
1
5
12
RESPONSE REGULATOR
RESPONSE REGULATOR, DOMAIN SWAPPING
SP0A_GEOSE
UNP
1
1
P52934
MSIKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNV
IMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYGKTTPVVRK
1
130
1DZ3
1
130
P52934
A
1
1
130
5
parallel
parallel
parallel
parallel
A
SER
101
A
SER
101
A
LEU
105
A
LEU
105
A
ASN
79
A
ASN
79
A
ALA
85
A
ALA
85
A
ILE
51
A
ILE
51
A
ASP
55
A
ASP
55
A
ILE
3
A
ILE
3
A
ALA
8
A
ALA
8
A
MET
28
A
MET
28
A
ALA
34
A
ALA
34
BINDING SITE FOR RESIDUE SO4 S 1
Software
7
A
TYR
21
A
TYR
21
7
1_555
A
ASN
112
A
ASN
112
7
1_555
A
LEU
113
A
LEU
113
7
1_555
A
ALA
114
A
ALA
114
7
1_555
A
HIS
115
A
HIS
115
7
1_555
A
HOH
334
C
HOH
7
1_555
A
HOH
318
C
HOH
7
1_555
154
P 32 2 1