0.022197
0.000000
0.000000
0.000000
0.012162
0.000000
0.000000
0.000000
0.007418
0.00000
0.00000
0.00000
Todone, F.
Weinzierl, R.O.J.
Brick, P.
Onesti, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
45.050
82.220
134.810
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
97
6306
10.1073/PNAS.97.12.6306
10841537
Crystal Structure of Rpb5, a Universal Eukaryotic RNA Polymerase Subunit and Trascription Factor Interaction Target
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
1999-05-15
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
0.87
1.0
PX9.6
SRS
0.87
SYNCHROTRON
SRS BEAMLINE PX9.6
25117.094
DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1
2.7.7.6
1
man
polymer
18.015
water
169
nat
water
RNA POLYMERASES I, II, AND III SUBUNIT ABC1, ABC27, DNA-DIRECTED RNA POLYMERASES I, II, AND III 27 KDA POLYPEPTIDE
no
no
MDQENERNISRLWRAFRTVKEMVKDRGYFITQEEVELPLEDFKAKYCDSMGRPQRKMMSFQANPTEESISKFPDMGSLWV
EFCDEPSVGVKTMKTFVIHIQEKNFQTGIFVYQNNITPSAMKLVPSIPPATIETFNEAALVVNITHHELVPKHIRLSSDE
KRELLKRYRLKESQLPRIQRADPVALYLGLKRGEVVKIIRKSETSGRYASYRICM
MDQENERNISRLWRAFRTVKEMVKDRGYFITQEEVELPLEDFKAKYCDSMGRPQRKMMSFQANPTEESISKFPDMGSLWV
EFCDEPSVGVKTMKTFVIHIQEKNFQTGIFVYQNNITPSAMKLVPSIPPATIETFNEAALVVNITHHELVPKHIRLSSDE
KRELLKRYRLKESQLPRIQRADPVALYLGLKRGEVVKIIRKSETSGRYASYRICM
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
BAKER'S YEAST
S288C
sample
SYNTHETIC GENE
NUCLEAR
YBR154C OR YBR1204
559292
SACCHAROMYCES CEREVISIAE
562
ESCHERICHIA COLI
B834
PLASMID
PGEX2TK
1
2.49
54
6.50
PROTEIN WAS CRYSTALLIZED FROM 20% PEG 800, 200 MM AMMONIUM SA SULPHATE, 100 MM SODIUM CACODYLATE, PH 6.5
repository
Initial release
Data collection
Derived calculations
Non-polymer description
Other
Source and taxonomy
Structure summary
Version format compliance
1
0
2000-06-09
1
1
2014-02-05
PDBE
Y
PDBE
2000-02-25
REL
HOH
water
HOH
2001
2
HOH
HOH
2001
A
HOH
2002
2
HOH
HOH
2002
A
HOH
2003
2
HOH
HOH
2003
A
HOH
2004
2
HOH
HOH
2004
A
HOH
2005
2
HOH
HOH
2005
A
HOH
2006
2
HOH
HOH
2006
A
HOH
2007
2
HOH
HOH
2007
A
HOH
2008
2
HOH
HOH
2008
A
HOH
2009
2
HOH
HOH
2009
A
HOH
2010
2
HOH
HOH
2010
A
HOH
2011
2
HOH
HOH
2011
A
HOH
2012
2
HOH
HOH
2012
A
HOH
2013
2
HOH
HOH
2013
A
HOH
2014
2
HOH
HOH
2014
A
HOH
2015
2
HOH
HOH
2015
A
HOH
2016
2
HOH
HOH
2016
A
HOH
2017
2
HOH
HOH
2017
A
HOH
2018
2
HOH
HOH
2018
A
HOH
2019
2
HOH
HOH
2019
A
HOH
2020
2
HOH
HOH
2020
A
HOH
2021
2
HOH
HOH
2021
A
HOH
2022
2
HOH
HOH
2022
A
HOH
2023
2
HOH
HOH
2023
A
HOH
2024
2
HOH
HOH
2024
A
HOH
2025
2
HOH
HOH
2025
A
HOH
2026
2
HOH
HOH
2026
A
HOH
2027
2
HOH
HOH
2027
A
HOH
2028
2
HOH
HOH
2028
A
HOH
2029
2
HOH
HOH
2029
A
HOH
2030
2
HOH
HOH
2030
A
HOH
2031
2
HOH
HOH
2031
A
HOH
2032
2
HOH
HOH
2032
A
HOH
2033
2
HOH
HOH
2033
A
HOH
2034
2
HOH
HOH
2034
A
HOH
2035
2
HOH
HOH
2035
A
HOH
2036
2
HOH
HOH
2036
A
HOH
2037
2
HOH
HOH
2037
A
HOH
2038
2
HOH
HOH
2038
A
HOH
2039
2
HOH
HOH
2039
A
HOH
2040
2
HOH
HOH
2040
A
HOH
2041
2
HOH
HOH
2041
A
HOH
2042
2
HOH
HOH
2042
A
HOH
2043
2
HOH
HOH
2043
A
HOH
2044
2
HOH
HOH
2044
A
HOH
2045
2
HOH
HOH
2045
A
HOH
2046
2
HOH
HOH
2046
A
HOH
2047
2
HOH
HOH
2047
A
HOH
2048
2
HOH
HOH
2048
A
HOH
2049
2
HOH
HOH
2049
A
HOH
2050
2
HOH
HOH
2050
A
HOH
2051
2
HOH
HOH
2051
A
HOH
2052
2
HOH
HOH
2052
A
HOH
2053
2
HOH
HOH
2053
A
HOH
2054
2
HOH
HOH
2054
A
HOH
2055
2
HOH
HOH
2055
A
HOH
2056
2
HOH
HOH
2056
A
HOH
2057
2
HOH
HOH
2057
A
HOH
2058
2
HOH
HOH
2058
A
HOH
2059
2
HOH
HOH
2059
A
HOH
2060
2
HOH
HOH
2060
A
HOH
2061
2
HOH
HOH
2061
A
HOH
2062
2
HOH
HOH
2062
A
HOH
2063
2
HOH
HOH
2063
A
HOH
2064
2
HOH
HOH
2064
A
HOH
2065
2
HOH
HOH
2065
A
HOH
2066
2
HOH
HOH
2066
A
HOH
2067
2
HOH
HOH
2067
A
HOH
2068
2
HOH
HOH
2068
A
HOH
2069
2
HOH
HOH
2069
A
HOH
2070
2
HOH
HOH
2070
A
HOH
2071
2
HOH
HOH
2071
A
HOH
2072
2
HOH
HOH
2072
A
HOH
2073
2
HOH
HOH
2073
A
HOH
2074
2
HOH
HOH
2074
A
HOH
2075
2
HOH
HOH
2075
A
HOH
2076
2
HOH
HOH
2076
A
HOH
2077
2
HOH
HOH
2077
A
HOH
2078
2
HOH
HOH
2078
A
HOH
2079
2
HOH
HOH
2079
A
HOH
2080
2
HOH
HOH
2080
A
HOH
2081
2
HOH
HOH
2081
A
HOH
2082
2
HOH
HOH
2082
A
HOH
2083
2
HOH
HOH
2083
A
HOH
2084
2
HOH
HOH
2084
A
HOH
2085
2
HOH
HOH
2085
A
HOH
2086
2
HOH
HOH
2086
A
HOH
2087
2
HOH
HOH
2087
A
HOH
2088
2
HOH
HOH
2088
A
HOH
2089
2
HOH
HOH
2089
A
HOH
2090
2
HOH
HOH
2090
A
HOH
2091
2
HOH
HOH
2091
A
HOH
2092
2
HOH
HOH
2092
A
HOH
2093
2
HOH
HOH
2093
A
HOH
2094
2
HOH
HOH
2094
A
HOH
2095
2
HOH
HOH
2095
A
HOH
2096
2
HOH
HOH
2096
A
HOH
2097
2
HOH
HOH
2097
A
HOH
2098
2
HOH
HOH
2098
A
HOH
2099
2
HOH
HOH
2099
A
HOH
2100
2
HOH
HOH
2100
A
HOH
2101
2
HOH
HOH
2101
A
HOH
2102
2
HOH
HOH
2102
A
HOH
2103
2
HOH
HOH
2103
A
HOH
2104
2
HOH
HOH
2104
A
HOH
2105
2
HOH
HOH
2105
A
HOH
2106
2
HOH
HOH
2106
A
HOH
2107
2
HOH
HOH
2107
A
HOH
2108
2
HOH
HOH
2108
A
HOH
2109
2
HOH
HOH
2109
A
HOH
2110
2
HOH
HOH
2110
A
HOH
2111
2
HOH
HOH
2111
A
HOH
2112
2
HOH
HOH
2112
A
HOH
2113
2
HOH
HOH
2113
A
HOH
2114
2
HOH
HOH
2114
A
HOH
2115
2
HOH
HOH
2115
A
HOH
2116
2
HOH
HOH
2116
A
HOH
2117
2
HOH
HOH
2117
A
HOH
2118
2
HOH
HOH
2118
A
HOH
2119
2
HOH
HOH
2119
A
HOH
2120
2
HOH
HOH
2120
A
HOH
2121
2
HOH
HOH
2121
A
HOH
2122
2
HOH
HOH
2122
A
HOH
2123
2
HOH
HOH
2123
A
HOH
2124
2
HOH
HOH
2124
A
HOH
2125
2
HOH
HOH
2125
A
HOH
2126
2
HOH
HOH
2126
A
HOH
2127
2
HOH
HOH
2127
A
HOH
2128
2
HOH
HOH
2128
A
HOH
2129
2
HOH
HOH
2129
A
HOH
2130
2
HOH
HOH
2130
A
HOH
2131
2
HOH
HOH
2131
A
HOH
2132
2
HOH
HOH
2132
A
HOH
2133
2
HOH
HOH
2133
A
HOH
2134
2
HOH
HOH
2134
A
HOH
2135
2
HOH
HOH
2135
A
HOH
2136
2
HOH
HOH
2136
A
HOH
2137
2
HOH
HOH
2137
A
HOH
2138
2
HOH
HOH
2138
A
HOH
2139
2
HOH
HOH
2139
A
HOH
2140
2
HOH
HOH
2140
A
HOH
2141
2
HOH
HOH
2141
A
HOH
2142
2
HOH
HOH
2142
A
HOH
2143
2
HOH
HOH
2143
A
HOH
2144
2
HOH
HOH
2144
A
HOH
2145
2
HOH
HOH
2145
A
HOH
2146
2
HOH
HOH
2146
A
HOH
2147
2
HOH
HOH
2147
A
HOH
2148
2
HOH
HOH
2148
A
HOH
2149
2
HOH
HOH
2149
A
HOH
2150
2
HOH
HOH
2150
A
HOH
2151
2
HOH
HOH
2151
A
HOH
2152
2
HOH
HOH
2152
A
HOH
2153
2
HOH
HOH
2153
A
HOH
2154
2
HOH
HOH
2154
A
HOH
2155
2
HOH
HOH
2155
A
HOH
2156
2
HOH
HOH
2156
A
HOH
2157
2
HOH
HOH
2157
A
HOH
2158
2
HOH
HOH
2158
A
HOH
2159
2
HOH
HOH
2159
A
HOH
2160
2
HOH
HOH
2160
A
HOH
2161
2
HOH
HOH
2161
A
HOH
2162
2
HOH
HOH
2162
A
HOH
2163
2
HOH
HOH
2163
A
HOH
2164
2
HOH
HOH
2164
A
HOH
2165
2
HOH
HOH
2165
A
HOH
2166
2
HOH
HOH
2166
A
HOH
2167
2
HOH
HOH
2167
A
HOH
2168
2
HOH
HOH
2168
A
HOH
2169
2
HOH
HOH
2169
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
ASN
5
n
5
ASN
5
A
GLU
6
n
6
GLU
6
A
ARG
7
n
7
ARG
7
A
ASN
8
n
8
ASN
8
A
ILE
9
n
9
ILE
9
A
SER
10
n
10
SER
10
A
ARG
11
n
11
ARG
11
A
LEU
12
n
12
LEU
12
A
TRP
13
n
13
TRP
13
A
ARG
14
n
14
ARG
14
A
ALA
15
n
15
ALA
15
A
PHE
16
n
16
PHE
16
A
ARG
17
n
17
ARG
17
A
THR
18
n
18
THR
18
A
VAL
19
n
19
VAL
19
A
LYS
20
n
20
LYS
20
A
GLU
21
n
21
GLU
21
A
MET
22
n
22
MET
22
A
VAL
23
n
23
VAL
23
A
LYS
24
n
24
LYS
24
A
ASP
25
n
25
ASP
25
A
ARG
26
n
26
ARG
26
A
GLY
27
n
27
GLY
27
A
TYR
28
n
28
TYR
28
A
PHE
29
n
29
PHE
29
A
ILE
30
n
30
ILE
30
A
THR
31
n
31
THR
31
A
GLN
32
n
32
GLN
32
A
GLU
33
n
33
GLU
33
A
GLU
34
n
34
GLU
34
A
VAL
35
n
35
VAL
35
A
GLU
36
n
36
GLU
36
A
LEU
37
n
37
LEU
37
A
PRO
38
n
38
PRO
38
A
LEU
39
n
39
LEU
39
A
GLU
40
n
40
GLU
40
A
ASP
41
n
41
ASP
41
A
PHE
42
n
42
PHE
42
A
LYS
43
n
43
LYS
43
A
ALA
44
n
44
ALA
44
A
LYS
45
n
45
LYS
45
A
TYR
46
n
46
TYR
46
A
CYS
47
n
47
CYS
47
A
ASP
48
n
48
ASP
48
A
SER
49
n
49
SER
49
A
MET
50
n
50
MET
50
A
GLY
51
n
51
GLY
51
A
ARG
52
n
52
ARG
52
A
PRO
53
n
53
PRO
53
A
GLN
54
n
54
GLN
54
A
ARG
55
n
55
ARG
55
A
LYS
56
n
56
LYS
56
A
MET
57
n
57
MET
57
A
MET
58
n
58
MET
58
A
SER
59
n
59
SER
59
A
PHE
60
n
60
PHE
60
A
GLN
61
n
61
GLN
61
A
ALA
62
n
62
ALA
62
A
ASN
63
n
63
ASN
63
A
PRO
64
n
64
PRO
64
A
THR
65
n
65
THR
65
A
GLU
66
n
66
GLU
66
A
GLU
67
n
67
GLU
67
A
SER
68
n
68
SER
68
A
ILE
69
n
69
ILE
69
A
SER
70
n
70
SER
70
A
LYS
71
n
71
LYS
71
A
PHE
72
n
72
PHE
72
A
PRO
73
n
73
PRO
73
A
ASP
74
n
74
ASP
74
A
MET
75
n
75
MET
75
A
GLY
76
n
76
GLY
76
A
SER
77
n
77
SER
77
A
LEU
78
n
78
LEU
78
A
TRP
79
n
79
TRP
79
A
VAL
80
n
80
VAL
80
A
GLU
81
n
81
GLU
81
A
PHE
82
n
82
PHE
82
A
CYS
83
n
83
CYS
83
A
ASP
84
n
84
ASP
84
A
GLU
85
n
85
GLU
85
A
PRO
86
n
86
PRO
86
A
SER
87
n
87
SER
87
A
VAL
88
n
88
VAL
88
A
GLY
89
n
89
GLY
89
A
VAL
90
n
90
VAL
90
A
LYS
91
n
91
LYS
91
A
THR
92
n
92
THR
92
A
MET
93
n
93
MET
93
A
LYS
94
n
94
LYS
94
A
THR
95
n
95
THR
95
A
PHE
96
n
96
PHE
96
A
VAL
97
n
97
VAL
97
A
ILE
98
n
98
ILE
98
A
HIS
99
n
99
HIS
99
A
ILE
100
n
100
ILE
100
A
GLN
101
n
101
GLN
101
A
GLU
102
n
102
GLU
102
A
LYS
103
n
103
LYS
103
A
ASN
104
n
104
ASN
104
A
PHE
105
n
105
PHE
105
A
GLN
106
n
106
GLN
106
A
THR
107
n
107
THR
107
A
GLY
108
n
108
GLY
108
A
ILE
109
n
109
ILE
109
A
PHE
110
n
110
PHE
110
A
VAL
111
n
111
VAL
111
A
TYR
112
n
112
TYR
112
A
GLN
113
n
113
GLN
113
A
ASN
114
n
114
ASN
114
A
ASN
115
n
115
ASN
115
A
ILE
116
n
116
ILE
116
A
THR
117
n
117
THR
117
A
PRO
118
n
118
PRO
118
A
SER
119
n
119
SER
119
A
ALA
120
n
120
ALA
120
A
MET
121
n
121
MET
121
A
LYS
122
n
122
LYS
122
A
LEU
123
n
123
LEU
123
A
VAL
124
n
124
VAL
124
A
PRO
125
n
125
PRO
125
A
SER
126
n
126
SER
126
A
ILE
127
n
127
ILE
127
A
PRO
128
n
128
PRO
128
A
PRO
129
n
129
PRO
129
A
ALA
130
n
130
ALA
130
A
THR
131
n
131
THR
131
A
ILE
132
n
132
ILE
132
A
GLU
133
n
133
GLU
133
A
THR
134
n
134
THR
134
A
PHE
135
n
135
PHE
135
A
ASN
136
n
136
ASN
136
A
GLU
137
n
137
GLU
137
A
ALA
138
n
138
ALA
138
A
ALA
139
n
139
ALA
139
A
LEU
140
n
140
LEU
140
A
VAL
141
n
141
VAL
141
A
VAL
142
n
142
VAL
142
A
ASN
143
n
143
ASN
143
A
ILE
144
n
144
ILE
144
A
THR
145
n
145
THR
145
A
HIS
146
n
146
HIS
146
A
HIS
147
n
147
HIS
147
A
GLU
148
n
148
GLU
148
A
LEU
149
n
149
LEU
149
A
VAL
150
n
150
VAL
150
A
PRO
151
n
151
PRO
151
A
LYS
152
n
152
LYS
152
A
HIS
153
n
153
HIS
153
A
ILE
154
n
154
ILE
154
A
ARG
155
n
155
ARG
155
A
LEU
156
n
156
LEU
156
A
SER
157
n
157
SER
157
A
SER
158
n
158
SER
158
A
ASP
159
n
159
ASP
159
A
GLU
160
n
160
GLU
160
A
LYS
161
n
161
LYS
161
A
ARG
162
n
162
ARG
162
A
GLU
163
n
163
GLU
163
A
LEU
164
n
164
LEU
164
A
LEU
165
n
165
LEU
165
A
LYS
166
n
166
LYS
166
A
ARG
167
n
167
ARG
167
A
TYR
168
n
168
TYR
168
A
ARG
169
n
169
ARG
169
A
LEU
170
n
170
LEU
170
A
LYS
171
n
171
LYS
171
A
GLU
172
n
172
GLU
172
A
SER
173
n
173
SER
173
A
GLN
174
n
174
GLN
174
A
LEU
175
n
175
LEU
175
A
PRO
176
n
176
PRO
176
A
ARG
177
n
177
ARG
177
A
ILE
178
n
178
ILE
178
A
GLN
179
n
179
GLN
179
A
ARG
180
n
180
ARG
180
A
ALA
181
n
181
ALA
181
A
ASP
182
n
182
ASP
182
A
PRO
183
n
183
PRO
183
A
VAL
184
n
184
VAL
184
A
ALA
185
n
185
ALA
185
A
LEU
186
n
186
LEU
186
A
TYR
187
n
187
TYR
187
A
LEU
188
n
188
LEU
188
A
GLY
189
n
189
GLY
189
A
LEU
190
n
190
LEU
190
A
LYS
191
n
191
LYS
191
A
ARG
192
n
192
ARG
192
A
GLY
193
n
193
GLY
193
A
GLU
194
n
194
GLU
194
A
VAL
195
n
195
VAL
195
A
VAL
196
n
196
VAL
196
A
LYS
197
n
197
LYS
197
A
ILE
198
n
198
ILE
198
A
ILE
199
n
199
ILE
199
A
ARG
200
n
200
ARG
200
A
LYS
201
n
201
LYS
201
A
SER
202
n
202
SER
202
A
GLU
203
n
203
GLU
203
A
THR
204
n
204
THR
204
A
SER
205
n
205
SER
205
A
GLY
206
n
206
GLY
206
A
ARG
207
n
207
ARG
207
A
TYR
208
n
208
TYR
208
A
ALA
209
n
209
ALA
209
A
SER
210
n
210
SER
210
A
TYR
211
n
211
TYR
211
A
ARG
212
n
212
ARG
212
A
ILE
213
n
213
ILE
213
A
CYS
214
n
214
CYS
214
A
MET
215
n
215
MET
215
A
author_and_software_defined_assembly
PQS
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
60
A
O
PHE
60
A
N
VAL
80
A
N
VAL
80
A
O
TRP
79
A
O
TRP
79
A
N
THR
107
A
N
THR
107
A
O
GLY
108
A
O
GLY
108
A
N
THR
131
A
N
THR
131
A
O
LYS
152
A
O
LYS
152
A
N
ILE
199
A
N
ILE
199
A
O
VAL
196
A
O
VAL
196
A
N
ARG
212
A
N
ARG
212
1
A
HOH
2034
B
HOH
1
A
HOH
2121
B
HOH
1
A
CG
ASN
5
A
CG
ASN
5
0
Y
1
A
OD1
ASN
5
A
OD1
ASN
5
0
Y
1
A
ND2
ASN
5
A
ND2
ASN
5
0
Y
1
A
CD
GLU
6
A
CD
GLU
6
0
Y
1
A
OE1
GLU
6
A
OE1
GLU
6
0
Y
1
A
OE2
GLU
6
A
OE2
GLU
6
0
Y
1
A
CD
GLU
40
A
CD
GLU
40
0
Y
1
A
OE1
GLU
40
A
OE1
GLU
40
0
Y
1
A
OE2
GLU
40
A
OE2
GLU
40
0
Y
1
A
CE
LYS
56
A
CE
LYS
56
0
Y
1
A
NZ
LYS
56
A
NZ
LYS
56
0
Y
1
A
O
SER
70
A
O
SER
70
0
Y
1
A
CE
LYS
103
A
CE
LYS
103
0
Y
1
A
NZ
LYS
103
A
NZ
LYS
103
0
Y
1
A
OG
SER
119
A
OG
SER
119
0
Y
1
A
CE
LYS
122
A
CE
LYS
122
0
Y
1
A
NZ
LYS
122
A
NZ
LYS
122
0
Y
1
A
CG
GLU
148
A
CG
GLU
148
0
Y
1
A
CD
GLU
148
A
CD
GLU
148
0
Y
1
A
OE1
GLU
148
A
OE1
GLU
148
0
Y
1
A
OE2
GLU
148
A
OE2
GLU
148
0
Y
1
A
CZ
ARG
162
A
CZ
ARG
162
0
Y
1
A
NH1
ARG
162
A
NH1
ARG
162
0
Y
1
A
NH2
ARG
162
A
NH2
ARG
162
0
Y
1
A
CG
GLU
163
A
CG
GLU
163
0
Y
1
A
CD
GLU
163
A
CD
GLU
163
0
Y
1
A
OE1
GLU
163
A
OE1
GLU
163
0
Y
1
A
OE2
GLU
163
A
OE2
GLU
163
0
Y
1
A
CG
LYS
166
A
CG
LYS
166
0
Y
1
A
CD
LYS
166
A
CD
LYS
166
0
Y
1
A
CE
LYS
166
A
CE
LYS
166
0
Y
1
A
NZ
LYS
166
A
NZ
LYS
166
0
Y
1
A
CG
ARG
169
A
CG
ARG
169
0
Y
1
A
CD
ARG
169
A
CD
ARG
169
0
Y
1
A
NE
ARG
169
A
NE
ARG
169
0
Y
1
A
CZ
ARG
169
A
CZ
ARG
169
0
Y
1
A
NH1
ARG
169
A
NH1
ARG
169
0
Y
1
A
NH2
ARG
169
A
NH2
ARG
169
0
Y
1
A
NZ
LYS
171
A
NZ
LYS
171
0
Y
1
A
CD
ARG
192
A
CD
ARG
192
0
Y
1
A
NE
ARG
192
A
NE
ARG
192
0
Y
1
A
CZ
ARG
192
A
CZ
ARG
192
0
Y
1
A
NH1
ARG
192
A
NH1
ARG
192
0
Y
1
A
NH2
ARG
192
A
NH2
ARG
192
0
Y
1
A
OG1
THR
204
A
OG1
THR
204
0
Y
1
A
CG2
THR
204
A
CG2
THR
204
0
Y
1
A
CD
ARG
207
A
CD
ARG
207
0
Y
1
A
NE
ARG
207
A
NE
ARG
207
0
Y
1
A
CZ
ARG
207
A
CZ
ARG
207
0
Y
1
A
NH1
ARG
207
A
NH1
ARG
207
0
Y
1
A
NH2
ARG
207
A
NH2
ARG
207
0
Y
1
A
MET
1
A
MET
1
1
Y
1
A
ASP
2
A
ASP
2
1
Y
1
A
GLN
3
A
GLN
3
1
Y
1
A
GLU
4
A
GLU
4
1
Y
1
A
A
O
O
HOH
HOH
2165
2167
2.10
1
A
A
O
O
HOH
HOH
2167
2167
1.87
1_555
3_656
1
A
A
O
O
HOH
HOH
2165
2165
1.94
1_555
3_656
1
A
GLU
6
-140.51
-26.52
1
A
THR
204
-105.97
46.27
1
A
SER
205
-173.45
139.40
PROTEIN_REP.PARAM
TOPHCSDX.PRO
0.271
0.217
0.217
1.9
15
946
19230
5.0
98.5
RANDOM
1000000
0.0001
1
RESTRAINED
THROUGHOUT
2
MAD
1.9
15
169
1894
0
0
1725
0.009
1.363
25.3
0.75
1.901
1.5
3.01
2.0
2.415
2.0
3.761
2.5
0.40
0.32
1.99
135
2249
8
6
1.900
15.000
1DZF
19245
0.05400
1
8.1000
4.700
96.9
1.90
2.00
2.900
0.22600
1
4.60
98.2
refinement
X-PLOR
3.8
data reduction
MOSFLM
data scaling
CCP4
phasing
X-PLOR
3.8
DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1 (E.C.2.7.7.6)
RPB5 from S.cerevisiae
1
N
N
2
N
N
A
GLU
6
A
GLU
6
HELX_P
A
ARG
26
A
ARG
26
1
1
21
A
THR
31
A
THR
31
HELX_P
A
GLU
36
A
GLU
36
1
2
6
A
PRO
38
A
PRO
38
HELX_P
A
CYS
47
A
CYS
47
1
3
10
A
GLN
54
A
GLN
54
HELX_P
A
MET
58
A
MET
58
5
4
5
A
THR
65
A
THR
65
HELX_P
A
PHE
72
A
PHE
72
1
5
8
A
GLY
89
A
GLY
89
HELX_P
A
LYS
103
A
LYS
103
1
6
15
A
THR
117
A
THR
117
HELX_P
A
LYS
122
A
LYS
122
1
7
6
A
GLU
137
A
GLU
137
HELX_P
A
VAL
141
A
VAL
141
1
8
5
A
ASN
143
A
ASN
143
HELX_P
A
HIS
147
A
HIS
147
5
9
5
A
SER
157
A
SER
157
HELX_P
A
TYR
168
A
TYR
168
1
10
12
A
LYS
171
A
LYS
171
HELX_P
A
LEU
175
A
LEU
175
5
11
5
A
ASP
182
A
ASP
182
HELX_P
A
GLY
189
A
GLY
189
1
12
8
TRANSFERASE
RNA POLYMERASE, RNA POLYMERASE SUBUNIT, TRANSFERASE
A
PRO
128
A
PRO
128
1
A
PRO
129
A
PRO
129
0.23
RPB5_YEAST
UNP
1
P20434
1
215
1DZF
1
215
P20434
A
1
1
215
4
3
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
A
PHE
60
A
PHE
60
A
ALA
62
A
ALA
62
A
LEU
78
A
LEU
78
A
PHE
82
A
PHE
82
A
THR
107
A
THR
107
A
TYR
112
A
TYR
112
A
THR
131
A
THR
131
A
ASN
136
A
ASN
136
A
LYS
152
A
LYS
152
A
ARG
155
A
ARG
155
A
VAL
195
A
VAL
195
A
ILE
199
A
ILE
199
A
SER
210
A
SER
210
A
ILE
213
A
ILE
213
20
C 2 2 21