1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Bateman, A. Bycroft, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 299 1113 10.1006/JMBI.2000.3778 10843862 The Structure of a Lysm Domain from E.Coli Membrane Bound Lytic Murein Transglycosylase D (Mltd) 2000 Can.J.Microbiol. 0008-4166 40 658 7922887 Cloning, Molecular Characterization, and Expression of the Genes Encoding the Lytic Functions of Lactococcal Bacteriophage-Phi-Lc3; a Dual Lysis System of Modular Design 1994 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 5442.219 Membrane-bound lytic murein transglycosylase D 4.2.2.- LYSM DOMAIN 1 syn polymer no no DSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVK DSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n entity entity_name_com pdbx_database_status pdbx_entity_src_syn pdbx_nmr_software struct_ref struct_ref_seq repository Initial release Version format compliance Version format compliance Data collection Database references Other Source and taxonomy Structure summary 1 0 2000-06-21 1 1 2011-05-08 1 2 2011-07-13 1 3 2019-09-25 _entity.pdbx_description _entity.pdbx_ec _pdbx_database_status.status_code_mr _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_nmr_software.name _struct_ref.db_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_seq_one_letter_code _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_accession 2003-11-05 SPRSDE PDBE Y PDBE 2000-03-27 REL REL 562 Escherichia coli sample 1 48 THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELED MTLD LYSM DOMAIN LEAST RESTRAINT VIOLATION 100 20 6.8 pH 310 K SA FROM RANDOM COIL STARTING STRUCTURES SA BRUNGER refinement X-PLOR structure solution X-PLOR 500 Bruker AMX ASP 1 n 1 ASP 1 A SER 2 n 2 SER 2 A ILE 3 n 3 ILE 3 A THR 4 n 4 THR 4 A TYR 5 n 5 TYR 5 A ARG 6 n 6 ARG 6 A VAL 7 n 7 VAL 7 A ARG 8 n 8 ARG 8 A LYS 9 n 9 LYS 9 A GLY 10 n 10 GLY 10 A ASP 11 n 11 ASP 11 A SER 12 n 12 SER 12 A LEU 13 n 13 LEU 13 A SER 14 n 14 SER 14 A SER 15 n 15 SER 15 A ILE 16 n 16 ILE 16 A ALA 17 n 17 ALA 17 A LYS 18 n 18 LYS 18 A ARG 19 n 19 ARG 19 A HIS 20 n 20 HIS 20 A GLY 21 n 21 GLY 21 A VAL 22 n 22 VAL 22 A ASN 23 n 23 ASN 23 A ILE 24 n 24 ILE 24 A LYS 25 n 25 LYS 25 A ASP 26 n 26 ASP 26 A VAL 27 n 27 VAL 27 A MET 28 n 28 MET 28 A ARG 29 n 29 ARG 29 A TRP 30 n 30 TRP 30 A ASN 31 n 31 ASN 31 A SER 32 n 32 SER 32 A ASP 33 n 33 ASP 33 A THR 34 n 34 THR 34 A ALA 35 n 35 ALA 35 A ASN 36 n 36 ASN 36 A LEU 37 n 37 LEU 37 A GLN 38 n 38 GLN 38 A PRO 39 n 39 PRO 39 A GLY 40 n 40 GLY 40 A ASP 41 n 41 ASP 41 A LYS 42 n 42 LYS 42 A LEU 43 n 43 LEU 43 A THR 44 n 44 THR 44 A LEU 45 n 45 LEU 45 A PHE 46 n 46 PHE 46 A VAL 47 n 47 VAL 47 A LYS 48 n 48 LYS 48 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O TYR 5 A O TYR 5 A N LEU 43 A N LEU 43 1 A ARG 6 0.294 SIDE CHAIN 1 A ARG 8 0.301 SIDE CHAIN 1 A ARG 19 0.308 SIDE CHAIN 1 A ARG 29 0.296 SIDE CHAIN 2 A ARG 6 0.291 SIDE CHAIN 2 A ARG 8 0.293 SIDE CHAIN 2 A ARG 19 0.129 SIDE CHAIN 2 A ARG 29 0.259 SIDE CHAIN 3 A ARG 6 0.307 SIDE CHAIN 3 A ARG 8 0.317 SIDE CHAIN 3 A ARG 19 0.135 SIDE CHAIN 3 A ARG 29 0.262 SIDE CHAIN 4 A ARG 6 0.318 SIDE CHAIN 4 A ARG 8 0.235 SIDE CHAIN 4 A ARG 19 0.264 SIDE CHAIN 4 A ARG 29 0.312 SIDE CHAIN 5 A ARG 6 0.317 SIDE CHAIN 5 A ARG 8 0.273 SIDE CHAIN 5 A ARG 19 0.237 SIDE CHAIN 5 A ARG 29 0.276 SIDE CHAIN 6 A ARG 6 0.315 SIDE CHAIN 6 A ARG 8 0.315 SIDE CHAIN 6 A ARG 19 0.248 SIDE CHAIN 6 A ARG 29 0.310 SIDE CHAIN 7 A ARG 6 0.264 SIDE CHAIN 7 A ARG 8 0.220 SIDE CHAIN 7 A ARG 19 0.215 SIDE CHAIN 7 A ARG 29 0.229 SIDE CHAIN 8 A ARG 6 0.249 SIDE CHAIN 8 A ARG 8 0.309 SIDE CHAIN 8 A ARG 19 0.284 SIDE CHAIN 8 A ARG 29 0.239 SIDE CHAIN 9 A ARG 6 0.300 SIDE CHAIN 9 A ARG 8 0.277 SIDE CHAIN 9 A ARG 19 0.251 SIDE CHAIN 9 A ARG 29 0.289 SIDE CHAIN 10 A ARG 6 0.287 SIDE CHAIN 10 A ARG 8 0.303 SIDE CHAIN 10 A ARG 19 0.297 SIDE CHAIN 10 A ARG 29 0.227 SIDE CHAIN 11 A ARG 6 0.221 SIDE CHAIN 11 A ARG 8 0.186 SIDE CHAIN 11 A ARG 19 0.210 SIDE CHAIN 11 A ARG 29 0.316 SIDE CHAIN 12 A ARG 6 0.259 SIDE CHAIN 12 A ARG 8 0.306 SIDE CHAIN 12 A ARG 19 0.230 SIDE CHAIN 12 A ARG 29 0.241 SIDE CHAIN 13 A ARG 6 0.230 SIDE CHAIN 13 A ARG 8 0.317 SIDE CHAIN 13 A ARG 19 0.108 SIDE CHAIN 13 A ARG 29 0.300 SIDE CHAIN 14 A ARG 6 0.275 SIDE CHAIN 14 A ARG 8 0.310 SIDE CHAIN 14 A ARG 19 0.304 SIDE CHAIN 14 A ARG 29 0.212 SIDE CHAIN 15 A ARG 6 0.218 SIDE CHAIN 15 A ARG 8 0.242 SIDE CHAIN 15 A ARG 19 0.279 SIDE CHAIN 15 A ARG 29 0.307 SIDE CHAIN 16 A ARG 6 0.307 SIDE CHAIN 16 A ARG 8 0.288 SIDE CHAIN 16 A ARG 19 0.280 SIDE CHAIN 16 A ARG 29 0.214 SIDE CHAIN 17 A ARG 6 0.148 SIDE CHAIN 17 A ARG 8 0.312 SIDE CHAIN 17 A ARG 19 0.281 SIDE CHAIN 17 A ARG 29 0.293 SIDE CHAIN 18 A ARG 6 0.254 SIDE CHAIN 18 A ARG 8 0.110 SIDE CHAIN 18 A ARG 19 0.118 SIDE CHAIN 18 A ARG 29 0.316 SIDE CHAIN 19 A ARG 6 0.316 SIDE CHAIN 19 A ARG 8 0.222 SIDE CHAIN 19 A ARG 19 0.259 SIDE CHAIN 19 A ARG 29 0.281 SIDE CHAIN 20 A ARG 6 0.203 SIDE CHAIN 20 A ARG 8 0.304 SIDE CHAIN 20 A ARG 19 0.289 SIDE CHAIN 20 A ARG 29 0.228 SIDE CHAIN 1 A PRO 39 -69.01 86.75 1 A LEU 45 -117.02 55.32 1 A VAL 47 -39.57 143.39 2 A PRO 39 -68.84 84.53 2 A LEU 45 -115.05 55.09 2 A VAL 47 -39.43 141.57 3 A SER 32 -89.68 -82.69 3 A THR 34 -88.20 42.36 3 A PRO 39 -68.45 86.30 3 A LEU 45 -110.62 55.13 3 A VAL 47 -39.64 144.65 4 A THR 34 -86.97 32.61 4 A PRO 39 -68.69 85.99 4 A LEU 45 -109.02 55.53 4 A VAL 47 -37.94 142.87 5 A PRO 39 -69.08 85.04 5 A VAL 47 -39.59 139.04 6 A SER 32 -87.04 -81.92 6 A THR 34 -89.82 43.78 6 A PRO 39 -69.44 86.19 6 A VAL 47 -39.40 140.06 7 A SER 32 -93.13 -82.83 7 A THR 34 -84.37 48.39 7 A PRO 39 -68.91 86.83 7 A LEU 45 -110.78 55.20 7 A VAL 47 -38.94 142.88 8 A THR 34 -89.13 32.48 8 A PRO 39 -69.10 84.73 8 A VAL 47 -37.21 138.15 9 A THR 34 -86.99 41.08 9 A PRO 39 -69.32 84.29 9 A VAL 47 -38.24 143.12 10 A SER 32 -92.31 -82.12 10 A THR 34 -87.12 41.64 10 A PRO 39 -69.87 86.39 10 A LEU 45 -117.73 54.52 10 A VAL 47 -38.39 137.30 11 A SER 32 -91.00 -81.32 11 A THR 34 -86.22 41.08 11 A PRO 39 -68.98 85.59 11 A LEU 45 -115.02 54.00 11 A VAL 47 -38.53 137.46 12 A PRO 39 -69.29 85.82 13 A SER 32 -92.45 -78.72 13 A THR 34 -84.84 47.06 13 A PRO 39 -69.86 85.90 13 A LEU 45 -118.38 54.53 13 A VAL 47 -39.00 137.49 14 A SER 32 -94.42 -82.53 14 A THR 34 -84.29 47.57 14 A PRO 39 -69.08 85.24 14 A LEU 45 -116.70 54.59 15 A SER 32 -92.68 -83.03 15 A THR 34 -83.39 48.05 15 A PRO 39 -68.86 87.40 15 A LEU 45 -113.91 56.43 16 A SER 32 -88.39 -81.95 16 A THR 34 -86.17 43.36 16 A PRO 39 -67.82 86.64 16 A LEU 45 -111.67 54.78 17 A SER 32 -97.29 -80.98 17 A ASP 33 -69.58 94.14 17 A THR 34 -87.28 49.43 17 A PRO 39 -69.05 84.52 17 A LEU 45 -117.20 55.49 17 A VAL 47 -39.36 140.28 18 A PRO 39 -69.06 85.55 18 A VAL 47 -38.97 138.95 19 A SER 32 -98.69 -78.31 19 A ASP 33 -68.08 92.52 19 A THR 34 -83.57 49.43 19 A PRO 39 -69.28 85.44 19 A LEU 45 -117.65 54.37 19 A VAL 47 -39.17 138.80 20 A PRO 39 -69.22 86.61 20 A VAL 47 -37.61 141.09 MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE D LYSM Domain from E.coli MLTD 1 N N A SER 12 A SER 12 HELX_P A HIS 20 A HIS 20 1 1 9 A ASN 23 A ASN 23 HELX_P A ASN 31 A ASN 31 1 2 9 A ASP 33 A ASP 33 HELX_P A LEU 37 A LEU 37 5 3 5 HYDROLASE CELL WALL, HYDROLASE, GLYCOSIDASE, LIPOPROTEIN, OUTER MEMBRANE, MULTIGENE FAMILY A0A2Z2J5F1_ECOLX UNP 1 352 A0A2Z2J5F1 DSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVK 352 399 1E0G 1 48 A0A2Z2J5F1 A 1 1 48 2 anti-parallel A THR 4 A THR 4 A VAL 7 A VAL 7 A ASP 41 A ASP 41 A THR 44 A THR 44 1 P 1