0.014859
0.008579
0.000000
0.000000
0.017158
0.000000
0.000000
0.000000
0.004780
0.00000
0.00000
0.00000
Essen, L.-O.
Kolbe, M.
Oesterhelt, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
67.300
67.300
209.200
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
K 1
39.098
POTASSIUM ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H40 O4
356.540
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
1-Oleoyl-R-glycerol
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C16 H32 O2
256.424
PALMITIC ACID
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C20 H28 O
284.436
RETINAL
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
K
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
O
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
N
N
208
S
C
N
209
N
C
N
210
N
O
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
C
N
215
N
N
N
216
N
O
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
S
N
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
C
N
269
N
C
N
270
N
C
N
271
N
C
N
272
R
C
N
273
N
O
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
N
328
N
O
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
C
N
341
N
O
N
342
N
O
N
343
N
C
N
344
N
C
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
C
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
C
N
357
N
C
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
N
395
N
C
N
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
C
N
408
N
C
N
409
N
C
N
410
N
C
N
411
N
C
N
412
N
C
N
413
N
C
N
414
N
C
N
415
N
C
N
416
N
C
N
417
N
C
N
418
N
C
N
419
N
C
N
420
N
C
N
421
N
C
N
422
N
O
N
423
N
C
N
424
N
C
N
425
N
C
N
426
N
C
N
427
N
C
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
N
N
457
S
C
N
458
N
C
N
459
N
O
N
460
N
C
N
461
N
O
N
462
N
O
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
N
N
471
S
C
N
472
N
C
N
473
N
O
N
474
R
C
N
475
N
O
N
476
N
C
N
477
N
O
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
N
N
488
S
C
N
489
N
C
N
490
N
O
N
491
N
C
Y
492
N
C
Y
493
N
C
Y
494
N
C
Y
495
N
N
Y
496
N
C
Y
497
N
C
Y
498
N
C
Y
499
N
C
Y
500
N
C
N
501
N
O
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
N
N
515
S
C
N
516
N
C
N
517
N
O
N
518
N
C
Y
519
N
C
Y
520
N
C
Y
521
N
C
Y
522
N
C
Y
523
N
C
Y
524
N
C
N
525
N
O
N
526
N
O
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
N
N
539
S
C
N
540
N
C
N
541
N
O
N
542
N
C
N
543
N
C
N
544
N
C
N
545
N
O
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
H
N
554
N
H
N
555
N
H
N
556
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
Z
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
Y
312
N
doub
Y
313
N
sing
Y
314
N
sing
N
315
N
sing
Y
316
N
doub
N
317
N
sing
Y
318
N
doub
N
319
N
sing
Y
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
doub
N
404
N
sing
N
405
N
sing
N
406
E
doub
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
E
doub
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
E
doub
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
E
doub
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
doub
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
doub
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
doub
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
Y
479
N
doub
Y
480
N
sing
Y
481
N
sing
N
482
N
sing
Y
483
N
doub
Y
484
N
sing
Y
485
N
sing
N
486
N
sing
Y
487
N
sing
Y
488
N
doub
N
489
N
sing
Y
490
N
doub
N
491
N
sing
Y
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
doub
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
Y
507
N
doub
Y
508
N
sing
Y
509
N
sing
N
510
N
sing
Y
511
N
doub
N
512
N
sing
Y
513
N
doub
N
514
N
sing
Y
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
doub
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
US
Science
SCIEAS
0038
0036-8075
288
1390
10.1126/SCIENCE.288.5470.1390
10827943
Structure of Light-Driven Chloride Pump Halorhodopsin at 1.8 A Resolution
2000
UK
Curr.Opin.Struct.Biol.
COSBEF
0801
0959-440X
8
489
10.1016/S0959-440X(98)80128-0
9729742
The Structure and Mechanism of the Family of Retinal Proteins from Halophilic Archaea
1998
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
247
726
10.1006/JMBI.1995.0176
7723027
Three-Dimensional Structure of Halorhodopsin at 7 Angstrom Resolution
1995
10.2210/pdb1e12/pdb
pdb_00001e12
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
MIRRORS
CCD
1999-08-15
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.93
1.0
ID14-3
ESRF
0.93
SYNCHROTRON
ESRF BEAMLINE ID14-3
SCHIFF BASE LINKAGE BETWEEN LYS A242 (NZ) AND RET A999 (C15)
26946.617
HALORHODOPSIN
YES
1
nat
polymer
35.453
CHLORIDE ION
1
syn
non-polymer
39.098
POTASSIUM ION
1
syn
non-polymer
256.424
PALMITIC ACID
1
syn
non-polymer
356.540
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
10
syn
non-polymer
284.436
RETINAL
1
syn
non-polymer
18.015
water
96
nat
water
HR
no
no
AVRENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPRLIWGATLMIPLVSISSYLGLLSGLTVGMIEMPAGHALAGEM
VRSQWGRYLTWALSTPMILLALGLLADVDLGSLFTVIAADIGMCVTGLAAAMTTSALLFRWAFYAISCAFFVVVLSALVT
DWAASASSAGTAEIFDTLRVLTVVLWLGYPIVWAVGVEGLALVQSVGATSWAYSVLDVFAKYVFAFILLRWVANNERTVA
VAGQTLGTMSSDD
AVRENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPRLIWGATLMIPLVSISSYLGLLSGLTVGMIEMPAGHALAGEM
VRSQWGRYLTWALSTPMILLALGLLADVDLGSLFTVIAADIGMCVTGLAAAMTTSALLFRWAFYAISCAFFVVVLSALVT
DWAASASSAGTAEIFDTLRVLTVVLWLGYPIVWAVGVEGLALVQSVGATSWAYSVLDVFAKYVFAFILLRWVANNERTVA
VAGQTLGTMSSDD
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
H. SAL. STRAIN D2 WAS CONSTRUCTED FOR HOMOLOGOUS OVEREXPRESSION OF HR. SEE ALSO HEYMANN ET AL., MOL. MICROBIOL., VO. 7, 623-630 (1993).
sample
MEMBRANE
2242
HALOBACTERIUM SALINARUM
D2
1
2.54
41.5
LIPIDIC CUBIC PHASE
7.00
CRYSTALLIZED IN A CUBIC LIPID PHASE MADE OF 58-62 W/V % 1-MONOOLEIN, 4 M KCL, 3.3-4.0 MG/ML HR AND 50 MM TRIS/HCL, PH 7.
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
pdbx_unobs_or_zero_occ_atoms
struct_conn
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_atoms
struct_conn
struct_site
repository
Initial release
Atomic model
Database references
Derived calculations
Non-polymer description
Other
Refinement description
Version format compliance
Atomic model
Database references
Derived calculations
Non-polymer description
Other
Refinement description
Source and taxonomy
Structure summary
Advisory
Data collection
Derived calculations
Experimental preparation
Other
Advisory
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2000-06-02
1
1
2012-11-14
1
2
2016-02-03
1
3
2019-05-22
1
4
2023-12-06
_exptl_crystal_grow.method
_pdbx_database_status.recvd_author_approval
_struct_conn.pdbx_leaving_atom_flag
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
X-RAY STRUCTURE OF THE BACTERIORHODOPSIN TRIMER/LIPID COMPLEX
HELIX
DETERMINATION METHOD: AUTHOR PROVIDED.
PDBE
Y
PDBE
2000-04-14
REL
REL
1
A
O
HOH
2027
6.68
CL
CHLORIDE ION
K
POTASSIUM ION
PLM
PALMITIC ACID
OLC
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
RET
RETINAL
HOH
water
CHAIN A ENGINEERED MUTATION VAL229ALA
ALA A 229, MUTATION IN D2 STRAIN VERIFIED BY
DIDEOXY-SEQUENCING
C-TERMINUS NOT DEFINED IN ELECTRON DENSITY FROM A263 -
D274.
IN THE CRYSTALS, HR ASSEMBLES SIMILARLY TO HOMOTRIMERS
AS BACTERIORHODOPSIN.
1BRR
PDB ENTRY 1BRR
PDB
experimental model
CL
501
2
CL
CL
501
A
K
503
3
K
K
503
A
PLM
700
4
PLM
PLM
700
A
OLC
701
5
OLC
OLC
701
A
OLC
703
5
OLC
OLC
703
A
OLC
705
5
OLC
OLC
705
A
OLC
707
5
OLC
OLC
707
A
OLC
709
5
OLC
OLC
709
A
OLC
711
5
OLC
OLC
711
A
OLC
713
5
OLC
OLC
713
A
OLC
715
5
OLC
OLC
715
A
OLC
717
5
OLC
OLC
717
A
OLC
719
5
OLC
OLC
719
A
RET
999
6
RET
RET
999
A
HOH
2001
7
HOH
HOH
2001
A
HOH
2002
7
HOH
HOH
2002
A
HOH
2003
7
HOH
HOH
2003
A
HOH
2004
7
HOH
HOH
2004
A
HOH
2005
7
HOH
HOH
2005
A
HOH
2006
7
HOH
HOH
2006
A
HOH
2007
7
HOH
HOH
2007
A
HOH
2008
7
HOH
HOH
2008
A
HOH
2009
7
HOH
HOH
2009
A
HOH
2010
7
HOH
HOH
2010
A
HOH
2011
7
HOH
HOH
2011
A
HOH
2012
7
HOH
HOH
2012
A
HOH
2013
7
HOH
HOH
2013
A
HOH
2014
7
HOH
HOH
2014
A
HOH
2015
7
HOH
HOH
2015
A
HOH
2016
7
HOH
HOH
2016
A
HOH
2017
7
HOH
HOH
2017
A
HOH
2018
7
HOH
HOH
2018
A
HOH
2019
7
HOH
HOH
2019
A
HOH
2020
7
HOH
HOH
2020
A
HOH
2021
7
HOH
HOH
2021
A
HOH
2022
7
HOH
HOH
2022
A
HOH
2023
7
HOH
HOH
2023
A
HOH
2024
7
HOH
HOH
2024
A
HOH
2025
7
HOH
HOH
2025
A
HOH
2026
7
HOH
HOH
2026
A
HOH
2027
7
HOH
HOH
2027
A
HOH
2028
7
HOH
HOH
2028
A
HOH
2029
7
HOH
HOH
2029
A
HOH
2030
7
HOH
HOH
2030
A
HOH
2031
7
HOH
HOH
2031
A
HOH
2032
7
HOH
HOH
2032
A
HOH
2033
7
HOH
HOH
2033
A
HOH
2034
7
HOH
HOH
2034
A
HOH
2035
7
HOH
HOH
2035
A
HOH
2036
7
HOH
HOH
2036
A
HOH
2037
7
HOH
HOH
2037
A
HOH
2038
7
HOH
HOH
2038
A
HOH
2039
7
HOH
HOH
2039
A
HOH
2040
7
HOH
HOH
2040
A
HOH
2041
7
HOH
HOH
2041
A
HOH
2042
7
HOH
HOH
2042
A
HOH
2043
7
HOH
HOH
2043
A
HOH
2044
7
HOH
HOH
2044
A
HOH
2045
7
HOH
HOH
2045
A
HOH
2046
7
HOH
HOH
2046
A
HOH
2047
7
HOH
HOH
2047
A
HOH
2048
7
HOH
HOH
2048
A
HOH
2049
7
HOH
HOH
2049
A
HOH
2050
7
HOH
HOH
2050
A
HOH
2051
7
HOH
HOH
2051
A
HOH
2052
7
HOH
HOH
2052
A
HOH
2053
7
HOH
HOH
2053
A
HOH
2054
7
HOH
HOH
2054
A
HOH
2055
7
HOH
HOH
2055
A
HOH
2056
7
HOH
HOH
2056
A
HOH
2057
7
HOH
HOH
2057
A
HOH
2058
7
HOH
HOH
2058
A
HOH
2059
7
HOH
HOH
2059
A
HOH
2060
7
HOH
HOH
2060
A
HOH
2061
7
HOH
HOH
2061
A
HOH
2062
7
HOH
HOH
2062
A
HOH
2063
7
HOH
HOH
2063
A
HOH
2064
7
HOH
HOH
2064
A
HOH
2065
7
HOH
HOH
2065
A
HOH
2066
7
HOH
HOH
2066
A
HOH
2067
7
HOH
HOH
2067
A
HOH
2068
7
HOH
HOH
2068
A
HOH
2069
7
HOH
HOH
2069
A
HOH
2070
7
HOH
HOH
2070
A
HOH
2071
7
HOH
HOH
2071
A
HOH
2072
7
HOH
HOH
2072
A
HOH
2073
7
HOH
HOH
2073
A
HOH
2074
7
HOH
HOH
2074
A
HOH
2075
7
HOH
HOH
2075
A
HOH
2076
7
HOH
HOH
2076
A
HOH
2077
7
HOH
HOH
2077
A
HOH
2078
7
HOH
HOH
2078
A
HOH
2079
7
HOH
HOH
2079
A
HOH
2080
7
HOH
HOH
2080
A
HOH
2081
7
HOH
HOH
2081
A
HOH
2082
7
HOH
HOH
2082
A
HOH
2083
7
HOH
HOH
2083
A
HOH
2084
7
HOH
HOH
2084
A
HOH
2085
7
HOH
HOH
2085
A
HOH
2086
7
HOH
HOH
2086
A
HOH
2087
7
HOH
HOH
2087
A
HOH
2088
7
HOH
HOH
2088
A
HOH
2089
7
HOH
HOH
2089
A
HOH
2090
7
HOH
HOH
2090
A
HOH
2091
7
HOH
HOH
2091
A
HOH
2092
7
HOH
HOH
2092
A
HOH
2093
7
HOH
HOH
2093
A
HOH
2094
7
HOH
HOH
2094
A
HOH
2095
7
HOH
HOH
2095
A
HOH
2096
7
HOH
HOH
2096
A
n
1
22
A
n
2
23
A
ARG
24
n
3
ARG
24
A
GLU
25
n
4
GLU
25
A
ASN
26
n
5
ASN
26
A
ALA
27
n
6
ALA
27
A
LEU
28
n
7
LEU
28
A
LEU
29
n
8
LEU
29
A
SER
30
n
9
SER
30
A
SER
31
n
10
SER
31
A
SER
32
n
11
SER
32
A
LEU
33
n
12
LEU
33
A
TRP
34
n
13
TRP
34
A
VAL
35
n
14
VAL
35
A
ASN
36
n
15
ASN
36
A
VAL
37
n
16
VAL
37
A
ALA
38
n
17
ALA
38
A
LEU
39
n
18
LEU
39
A
ALA
40
n
19
ALA
40
A
GLY
41
n
20
GLY
41
A
ILE
42
n
21
ILE
42
A
ALA
43
n
22
ALA
43
A
ILE
44
n
23
ILE
44
A
LEU
45
n
24
LEU
45
A
VAL
46
n
25
VAL
46
A
PHE
47
n
26
PHE
47
A
VAL
48
n
27
VAL
48
A
TYR
49
n
28
TYR
49
A
MET
50
n
29
MET
50
A
GLY
51
n
30
GLY
51
A
ARG
52
n
31
ARG
52
A
THR
53
n
32
THR
53
A
ILE
54
n
33
ILE
54
A
ARG
55
n
34
ARG
55
A
PRO
56
n
35
PRO
56
A
GLY
57
n
36
GLY
57
A
ARG
58
n
37
ARG
58
A
PRO
59
n
38
PRO
59
A
ARG
60
n
39
ARG
60
A
LEU
61
n
40
LEU
61
A
ILE
62
n
41
ILE
62
A
TRP
63
n
42
TRP
63
A
GLY
64
n
43
GLY
64
A
ALA
65
n
44
ALA
65
A
THR
66
n
45
THR
66
A
LEU
67
n
46
LEU
67
A
MET
68
n
47
MET
68
A
ILE
69
n
48
ILE
69
A
PRO
70
n
49
PRO
70
A
LEU
71
n
50
LEU
71
A
VAL
72
n
51
VAL
72
A
SER
73
n
52
SER
73
A
ILE
74
n
53
ILE
74
A
SER
75
n
54
SER
75
A
SER
76
n
55
SER
76
A
TYR
77
n
56
TYR
77
A
LEU
78
n
57
LEU
78
A
GLY
79
n
58
GLY
79
A
LEU
80
n
59
LEU
80
A
LEU
81
n
60
LEU
81
A
SER
82
n
61
SER
82
A
GLY
83
n
62
GLY
83
A
LEU
84
n
63
LEU
84
A
THR
85
n
64
THR
85
A
VAL
86
n
65
VAL
86
A
GLY
87
n
66
GLY
87
A
MET
88
n
67
MET
88
A
ILE
89
n
68
ILE
89
A
GLU
90
n
69
GLU
90
A
MET
91
n
70
MET
91
A
PRO
92
n
71
PRO
92
A
ALA
93
n
72
ALA
93
A
GLY
94
n
73
GLY
94
A
HIS
95
n
74
HIS
95
A
ALA
96
n
75
ALA
96
A
LEU
97
n
76
LEU
97
A
ALA
98
n
77
ALA
98
A
GLY
99
n
78
GLY
99
A
GLU
100
n
79
GLU
100
A
MET
101
n
80
MET
101
A
VAL
102
n
81
VAL
102
A
ARG
103
n
82
ARG
103
A
SER
104
n
83
SER
104
A
GLN
105
n
84
GLN
105
A
TRP
106
n
85
TRP
106
A
GLY
107
n
86
GLY
107
A
ARG
108
n
87
ARG
108
A
TYR
109
n
88
TYR
109
A
LEU
110
n
89
LEU
110
A
THR
111
n
90
THR
111
A
TRP
112
n
91
TRP
112
A
ALA
113
n
92
ALA
113
A
LEU
114
n
93
LEU
114
A
SER
115
n
94
SER
115
A
THR
116
n
95
THR
116
A
PRO
117
n
96
PRO
117
A
MET
118
n
97
MET
118
A
ILE
119
n
98
ILE
119
A
LEU
120
n
99
LEU
120
A
LEU
121
n
100
LEU
121
A
ALA
122
n
101
ALA
122
A
LEU
123
n
102
LEU
123
A
GLY
124
n
103
GLY
124
A
LEU
125
n
104
LEU
125
A
LEU
126
n
105
LEU
126
A
ALA
127
n
106
ALA
127
A
ASP
128
n
107
ASP
128
A
VAL
129
n
108
VAL
129
A
ASP
130
n
109
ASP
130
A
LEU
131
n
110
LEU
131
A
GLY
132
n
111
GLY
132
A
SER
133
n
112
SER
133
A
LEU
134
n
113
LEU
134
A
PHE
135
n
114
PHE
135
A
THR
136
n
115
THR
136
A
VAL
137
n
116
VAL
137
A
ILE
138
n
117
ILE
138
A
ALA
139
n
118
ALA
139
A
ALA
140
n
119
ALA
140
A
ASP
141
n
120
ASP
141
A
ILE
142
n
121
ILE
142
A
GLY
143
n
122
GLY
143
A
MET
144
n
123
MET
144
A
CYS
145
n
124
CYS
145
A
VAL
146
n
125
VAL
146
A
THR
147
n
126
THR
147
A
GLY
148
n
127
GLY
148
A
LEU
149
n
128
LEU
149
A
ALA
150
n
129
ALA
150
A
ALA
151
n
130
ALA
151
A
ALA
152
n
131
ALA
152
A
MET
153
n
132
MET
153
A
THR
154
n
133
THR
154
A
THR
155
n
134
THR
155
A
SER
156
n
135
SER
156
A
ALA
157
n
136
ALA
157
A
LEU
158
n
137
LEU
158
A
LEU
159
n
138
LEU
159
A
PHE
160
n
139
PHE
160
A
ARG
161
n
140
ARG
161
A
TRP
162
n
141
TRP
162
A
ALA
163
n
142
ALA
163
A
PHE
164
n
143
PHE
164
A
TYR
165
n
144
TYR
165
A
ALA
166
n
145
ALA
166
A
ILE
167
n
146
ILE
167
A
SER
168
n
147
SER
168
A
CYS
169
n
148
CYS
169
A
ALA
170
n
149
ALA
170
A
PHE
171
n
150
PHE
171
A
PHE
172
n
151
PHE
172
A
VAL
173
n
152
VAL
173
A
VAL
174
n
153
VAL
174
A
VAL
175
n
154
VAL
175
A
LEU
176
n
155
LEU
176
A
SER
177
n
156
SER
177
A
ALA
178
n
157
ALA
178
A
LEU
179
n
158
LEU
179
A
VAL
180
n
159
VAL
180
A
THR
181
n
160
THR
181
A
ASP
182
n
161
ASP
182
A
TRP
183
n
162
TRP
183
A
ALA
184
n
163
ALA
184
A
ALA
185
n
164
ALA
185
A
SER
186
n
165
SER
186
A
ALA
187
n
166
ALA
187
A
SER
188
n
167
SER
188
A
SER
189
n
168
SER
189
A
ALA
190
n
169
ALA
190
A
GLY
191
n
170
GLY
191
A
THR
192
n
171
THR
192
A
ALA
193
n
172
ALA
193
A
GLU
194
n
173
GLU
194
A
ILE
195
n
174
ILE
195
A
PHE
196
n
175
PHE
196
A
ASP
197
n
176
ASP
197
A
THR
198
n
177
THR
198
A
LEU
199
n
178
LEU
199
A
ARG
200
n
179
ARG
200
A
VAL
201
n
180
VAL
201
A
LEU
202
n
181
LEU
202
A
THR
203
n
182
THR
203
A
VAL
204
n
183
VAL
204
A
VAL
205
n
184
VAL
205
A
LEU
206
n
185
LEU
206
A
TRP
207
n
186
TRP
207
A
LEU
208
n
187
LEU
208
A
GLY
209
n
188
GLY
209
A
TYR
210
n
189
TYR
210
A
PRO
211
n
190
PRO
211
A
ILE
212
n
191
ILE
212
A
VAL
213
n
192
VAL
213
A
TRP
214
n
193
TRP
214
A
ALA
215
n
194
ALA
215
A
VAL
216
n
195
VAL
216
A
GLY
217
n
196
GLY
217
A
VAL
218
n
197
VAL
218
A
GLU
219
n
198
GLU
219
A
GLY
220
n
199
GLY
220
A
LEU
221
n
200
LEU
221
A
ALA
222
n
201
ALA
222
A
LEU
223
n
202
LEU
223
A
VAL
224
n
203
VAL
224
A
GLN
225
n
204
GLN
225
A
SER
226
n
205
SER
226
A
VAL
227
n
206
VAL
227
A
GLY
228
n
207
GLY
228
A
ALA
229
n
208
ALA
229
A
THR
230
n
209
THR
230
A
SER
231
n
210
SER
231
A
TRP
232
n
211
TRP
232
A
ALA
233
n
212
ALA
233
A
TYR
234
n
213
TYR
234
A
SER
235
n
214
SER
235
A
VAL
236
n
215
VAL
236
A
LEU
237
n
216
LEU
237
A
ASP
238
n
217
ASP
238
A
VAL
239
n
218
VAL
239
A
PHE
240
n
219
PHE
240
A
ALA
241
n
220
ALA
241
A
LYS
242
n
221
LYS
242
A
TYR
243
n
222
TYR
243
A
VAL
244
n
223
VAL
244
A
PHE
245
n
224
PHE
245
A
ALA
246
n
225
ALA
246
A
PHE
247
n
226
PHE
247
A
ILE
248
n
227
ILE
248
A
LEU
249
n
228
LEU
249
A
LEU
250
n
229
LEU
250
A
ARG
251
n
230
ARG
251
A
TRP
252
n
231
TRP
252
A
VAL
253
n
232
VAL
253
A
ALA
254
n
233
ALA
254
A
ASN
255
n
234
ASN
255
A
ASN
256
n
235
ASN
256
A
GLU
257
n
236
GLU
257
A
ARG
258
n
237
ARG
258
A
THR
259
n
238
THR
259
A
VAL
260
n
239
VAL
260
A
ALA
261
n
240
ALA
261
A
VAL
262
n
241
VAL
262
A
n
242
263
A
n
243
264
A
n
244
265
A
n
245
266
A
n
246
267
A
n
247
268
A
n
248
269
A
n
249
270
A
n
250
271
A
n
251
272
A
n
252
273
A
n
253
274
A
author_and_software_defined_assembly
PQS
3
trimeric
7970
-135.6
46150
A
GLY
83
A
O
GLY
62
1_555
A
K
503
C
K
K
1_555
A
VAL
86
A
O
VAL
65
1_555
85.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_565
-x+y,-x+1,z
crystal symmetry operation
-33.6500000000
58.2835096747
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-y+1,x-y+1,z
crystal symmetry operation
33.6500000000
58.2835096747
0.0000000000
A
O
GLY
87
A
O
GLY
66
A
N
SER
104
A
N
SER
83
1
A
HOH
2019
P
HOH
1
A
HOH
2035
P
HOH
1
A
HOH
2086
P
HOH
1
A
CG
ARG
24
A
CG
ARG
3
1
Y
1
A
CD
ARG
24
A
CD
ARG
3
1
Y
1
A
NE
ARG
24
A
NE
ARG
3
1
Y
1
A
CZ
ARG
24
A
CZ
ARG
3
1
Y
1
A
NH1
ARG
24
A
NH1
ARG
3
1
Y
1
A
NH2
ARG
24
A
NH2
ARG
3
1
Y
1
A
CG
GLU
25
A
CG
GLU
4
1
Y
1
A
CD
GLU
25
A
CD
GLU
4
1
Y
1
A
OE1
GLU
25
A
OE1
GLU
4
1
Y
1
A
OE2
GLU
25
A
OE2
GLU
4
1
Y
1
A
CG1
VAL
262
A
CG1
VAL
241
1
Y
1
A
CG2
VAL
262
A
CG2
VAL
241
1
Y
1
A
O19
OLC
701
E
O19
OLC
1
1
N
1
A
C24
OLC
701
E
C24
OLC
0
N
1
A
C21
OLC
701
E
C21
OLC
0
N
1
A
C22
OLC
701
E
C22
OLC
0
N
1
A
O25
OLC
701
E
O25
OLC
0
N
1
A
O23
OLC
701
E
O23
OLC
0
N
1
A
O19
OLC
703
F
O19
OLC
1
1
N
1
A
C24
OLC
703
F
C24
OLC
0
N
1
A
C21
OLC
703
F
C21
OLC
0
N
1
A
C1
OLC
703
F
C1
OLC
0
N
1
A
C22
OLC
703
F
C22
OLC
0
N
1
A
O25
OLC
703
F
O25
OLC
0
N
1
A
O23
OLC
703
F
O23
OLC
0
N
1
A
O20
OLC
703
F
O20
OLC
0
N
1
A
O19
OLC
705
G
O19
OLC
1
1
N
1
A
C18
OLC
705
G
C18
OLC
0
N
1
A
C17
OLC
705
G
C17
OLC
0
N
1
A
C24
OLC
705
G
C24
OLC
0
N
1
A
C16
OLC
705
G
C16
OLC
0
N
1
A
C15
OLC
705
G
C15
OLC
0
N
1
A
C13
OLC
705
G
C13
OLC
0
N
1
A
C14
OLC
705
G
C14
OLC
0
N
1
A
C21
OLC
705
G
C21
OLC
0
N
1
A
C22
OLC
705
G
C22
OLC
0
N
1
A
O25
OLC
705
G
O25
OLC
0
N
1
A
O23
OLC
705
G
O23
OLC
0
N
1
A
O20
OLC
705
G
O20
OLC
0
N
1
A
O19
OLC
707
H
O19
OLC
1
1
N
1
A
C18
OLC
707
H
C18
OLC
0
N
1
A
C17
OLC
707
H
C17
OLC
0
N
1
A
C11
OLC
707
H
C11
OLC
0
N
1
A
C24
OLC
707
H
C24
OLC
0
N
1
A
C16
OLC
707
H
C16
OLC
0
N
1
A
C12
OLC
707
H
C12
OLC
0
N
1
A
C15
OLC
707
H
C15
OLC
0
N
1
A
C13
OLC
707
H
C13
OLC
0
N
1
A
C14
OLC
707
H
C14
OLC
0
N
1
A
C21
OLC
707
H
C21
OLC
0
N
1
A
C22
OLC
707
H
C22
OLC
0
N
1
A
O25
OLC
707
H
O25
OLC
0
N
1
A
O23
OLC
707
H
O23
OLC
0
N
1
A
O20
OLC
707
H
O20
OLC
0
N
1
A
O19
OLC
709
I
O19
OLC
1
1
N
1
A
O19
OLC
711
J
O19
OLC
1
1
N
1
A
O19
OLC
713
K
O19
OLC
1
1
N
1
A
C24
OLC
713
K
C24
OLC
0
N
1
A
C21
OLC
713
K
C21
OLC
0
N
1
A
C22
OLC
713
K
C22
OLC
0
N
1
A
O25
OLC
713
K
O25
OLC
0
N
1
A
O23
OLC
713
K
O23
OLC
0
N
1
A
O19
OLC
715
L
O19
OLC
1
1
N
1
A
C24
OLC
715
L
C24
OLC
0
N
1
A
C21
OLC
715
L
C21
OLC
0
N
1
A
C22
OLC
715
L
C22
OLC
0
N
1
A
O25
OLC
715
L
O25
OLC
0
N
1
A
O23
OLC
715
L
O23
OLC
0
N
1
A
O19
OLC
717
M
O19
OLC
1
1
N
1
A
C24
OLC
717
M
C24
OLC
0
N
1
A
C21
OLC
717
M
C21
OLC
0
N
1
A
C22
OLC
717
M
C22
OLC
0
N
1
A
O25
OLC
717
M
O25
OLC
0
N
1
A
O23
OLC
717
M
O23
OLC
0
N
1
A
O19
OLC
719
N
O19
OLC
1
1
N
1
A
C18
OLC
719
N
C18
OLC
0
N
1
A
C10
OLC
719
N
C10
OLC
0
N
1
A
C17
OLC
719
N
C17
OLC
0
N
1
A
C11
OLC
719
N
C11
OLC
0
N
1
A
C24
OLC
719
N
C24
OLC
0
N
1
A
C16
OLC
719
N
C16
OLC
0
N
1
A
C12
OLC
719
N
C12
OLC
0
N
1
A
C15
OLC
719
N
C15
OLC
0
N
1
A
C13
OLC
719
N
C13
OLC
0
N
1
A
C14
OLC
719
N
C14
OLC
0
N
1
A
C21
OLC
719
N
C21
OLC
0
N
1
A
C1
OLC
719
N
C1
OLC
0
N
1
A
C22
OLC
719
N
C22
OLC
0
N
1
A
O25
OLC
719
N
O25
OLC
0
N
1
A
O23
OLC
719
N
O23
OLC
0
N
1
A
O20
OLC
719
N
O20
OLC
0
N
1
A
ALA
22
A
ALA
1
1
Y
1
A
VAL
23
A
VAL
2
1
Y
1
A
ALA
263
A
ALA
242
1
Y
1
A
GLY
264
A
GLY
243
1
Y
1
A
GLN
265
A
GLN
244
1
Y
1
A
THR
266
A
THR
245
1
Y
1
A
LEU
267
A
LEU
246
1
Y
1
A
GLY
268
A
GLY
247
1
Y
1
A
THR
269
A
THR
248
1
Y
1
A
MET
270
A
MET
249
1
Y
1
A
SER
271
A
SER
250
1
Y
1
A
SER
272
A
SER
251
1
Y
1
A
ASP
273
A
ASP
252
1
Y
1
A
ASP
274
A
ASP
253
1
Y
1
-12.60
1.60
100.20
87.60
A
A
A
CG
SD
CE
MET
MET
MET
118
118
118
N
1
A
GLU
25
-179.58
34.64
1
A
LEU
179
-60.84
-76.10
1
A
VAL
180
-35.28
-22.26
1
A
THR
181
-139.26
-80.01
1
A
LYS
242
-107.39
-65.50
HR_DEPOSIT_PARAM.PRO
HR_DEPOSIT_TOP.PRO
PROTEIN.PARAM
PROTEIN.TOP
32.5
-3.578
-0.275
0.
-3.578
0.
7.156
LIPID PATCH BETWEEN HR TRIMERS MODELLED WITH 1-MONOOLEIN MOLECULES. NOTE THAT THESE OLC MOLECULES ARE MOSTLY ONLY PARTIALLY DEFINED BY ELECTRON DENSITY.
0.257
0.237
0.237
1.8
25
1617
26513
6.0
98.1
RANDOM
10000
1
RESTRAINED
THROUGHOUT
0
MOLECULAR REPLACEMENT
PDB ENTRY 1BRR
FLAT MODEL
85.897
0.332776
1.8
25
96
2169
280
0
1793
0.018721
1.77549
0.56
1.5
0.97
2.0
0.69
2.0
1.08
2.5
0.309
0.336
1.82
33
723
32
26.2
1.800
25.000
1E12
26590
0.000
0.05100
1
26.5000
6.600
98.2
0.31300
1.80
1.90
2.800
1
5.10
92.3
refinement
CNS
0.9
data reduction
MOSFLM
data scaling
SCALA
phasing
CNS
Halorhodopsin, a light-driven chloride pump
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
6
N
N
7
N
N
IN THE CRYSTALS, HR ASSEMBLES SIMILARLY TO
HOMOTRIMERS AS BACTERIORHODOPSIN.
A
ASN
26
A
ASN
5
HELX_P
A
GLY
51
A
GLY
30
1
A
26
A
ARG
58
A
ARG
37
HELX_P
A
LEU
81
A
LEU
60
1
B
24
A
TRP
106
A
TRP
85
HELX_P
A
ALA
127
A
ALA
106
1
C
22
A
LEU
131
A
LEU
110
HELX_P
A
THR
154
A
THR
133
1
D
24
A
LEU
158
A
LEU
137
HELX_P
A
VAL
180
A
VAL
159
1
E
23
A
THR
181
A
THR
160
HELX_P
A
ALA
190
A
ALA
169
1
EA
10
A
ALA
193
A
ALA
172
HELX_P
A
VAL
216
A
VAL
195
1
F
24
A
VAL
227
A
VAL
206
HELX_P
A
ASN
255
A
ASN
234
1
G
29
A
GLU
257
A
GLU
236
HELX_P
A
ALA
261
A
ALA
240
1
GA
5
covale
1.323
one
A
LYS
242
A
NZ
LYS
221
1_555
A
RET
999
O
C15
RET
1_555
metalc
2.534
A
GLY
83
A
O
GLY
62
1_555
A
K
503
C
K
K
1_555
metalc
2.426
A
VAL
86
A
O
VAL
65
1_555
A
K
503
C
K
K
1_555
TRANSPORT PROTEIN
ION PUMP, CHLORIDE PUMP, MEMBRANE PROTEIN, RETINAL PROTEIN, LIPIDS, PALMITATE, HALOARCHAEA, CHLORIDE TRANSPORT, TRANSPORT PROTEIN
BACH_HALSA
UNP
1
P0DMH7
22
274
1E12
22
274
P0DMH7
A
1
1
253
1
VAL
SEE REMARK 999
ALA
229
1E12
A
P0DMH7
UNP
229
208
2
anti-parallel
A
GLY
87
A
GLY
66
A
GLU
90
A
GLU
69
A
MET
101
A
MET
80
A
SER
104
A
SER
83
BINDING SITE FOR RESIDUE CL A 501
A
CL
501
Software
3
BINDING SITE FOR RESIDUE K A 503
A
K
503
Software
2
BINDING SITE FOR RESIDUE RET A 999
A
RET
999
Software
11
BINDING SITE FOR RESIDUE PLM A 700
A
PLM
700
Software
7
BINDING SITE FOR RESIDUE OLC A 701
A
OLC
701
Software
2
BINDING SITE FOR RESIDUE OLC A 703
A
OLC
703
Software
2
BINDING SITE FOR RESIDUE OLC A 705
A
OLC
705
Software
1
BINDING SITE FOR RESIDUE OLC A 709
A
OLC
709
Software
4
BINDING SITE FOR RESIDUE OLC A 711
A
OLC
711
Software
1
BINDING SITE FOR RESIDUE OLC A 713
A
OLC
713
Software
4
BINDING SITE FOR RESIDUE OLC A 715
A
OLC
715
Software
5
BINDING SITE FOR RESIDUE OLC A 717
A
OLC
717
Software
3
BINDING SITE FOR RESIDUE OLC A 719
A
OLC
719
Software
1
A
THR
111
A
THR
90
3
1_555
A
SER
115
A
SER
94
3
1_555
A
LYS
242
A
LYS
221
3
1_555
A
GLY
83
A
GLY
62
2
1_555
A
VAL
86
A
VAL
65
2
1_555
A
TRP
112
A
TRP
91
11
1_555
A
THR
116
A
THR
95
11
1_555
A
MET
144
A
MET
123
11
1_555
A
TYR
165
A
TYR
144
11
1_555
A
SER
168
A
SER
147
11
1_555
A
PHE
172
A
PHE
151
11
1_555
A
TRP
207
A
TRP
186
11
1_555
A
TYR
210
A
TYR
189
11
1_555
A
PRO
211
A
PRO
190
11
1_555
A
ASP
238
A
ASP
217
11
1_555
A
LYS
242
A
LYS
221
11
1_555
A
SER
75
A
SER
54
7
2_665
A
LEU
110
A
LEU
89
7
2_665
A
THR
111
A
THR
90
7
2_665
A
PRO
117
A
PRO
96
7
2_665
A
PHE
135
A
PHE
114
7
1_555
A
ALA
139
A
ALA
118
7
1_555
A
VAL
146
A
VAL
125
7
1_555
A
TRP
162
A
TRP
141
2
1_555
A
HOH
2064
P
HOH
2
1_555
A
OLC
705
G
OLC
2
2_655
A
OLC
719
N
OLC
2
1_555
A
OLC
703
F
OLC
1
3_665
A
ALA
157
A
ALA
136
4
1_555
A
LEU
159
A
LEU
138
4
1_555
A
PHE
160
A
PHE
139
4
1_555
A
OLC
717
M
OLC
4
1_555
A
ILE
212
A
ILE
191
1
3_665
A
GLY
41
A
GLY
20
4
2_665
A
ILE
42
A
ILE
21
4
2_665
A
LEU
45
A
LEU
24
4
2_665
A
OLC
715
L
OLC
4
1_555
A
VAL
37
A
VAL
16
5
2_665
A
ALA
38
A
ALA
17
5
2_665
A
LEU
45
A
LEU
24
5
2_665
A
OLC
713
K
OLC
5
1_555
A
OLC
717
M
OLC
5
1_555
A
ARG
52
A
ARG
31
3
2_665
A
OLC
709
I
OLC
3
1_555
A
OLC
715
L
OLC
3
1_555
A
OLC
703
F
OLC
1
1_555
182
P 63 2 2