1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Calzolai, L. Lysek, D.A. Guntert, P. Von Schroetter, C. Zahn, R. Riek, R. Wuthrich, K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 97 8340 10.1073/PNAS.97.15.8340 10900000 NMR Structures of Three Single-Residue Variants of the Human Prion Protein 2000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 12527.906 PRION PROTEIN GLOBULAR DOMAIN 125-228 YES 1 man polymer no no LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPVDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVK MMERVVEQMCITQYERESQAYYQR LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPVDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVK MMERVVEQMCITQYERESQAYYQR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN sample 9606 HOMO SAPIENS 562 ESCHERICHIA COLI repository Initial release Version format compliance Version format compliance 1 0 2000-07-20 1 1 2011-05-08 1 2 2011-07-13 HUMAN PRION PROTEIN VARIANT M166V HUMAN PRION PROTEIN VARIANT S170N HUMAN PRION PROTEIN VARIANT S170N HUMAN PRION PROTEIN VARIANT R220K HUMAN PRION PROTEIN VARIANT R220K HELIX DETERMINATION METHOD: AUTHOR PROVIDED. SHEET DETERMINATION METHOD: AUTHOR PROVIDED. PDBE Y PDBE 2000-05-04 REL THE CHAIN A ENGINEERED MUTATION MET166VAL 20 20 50 MM SODIUM ACETATE 4.5 pH 293 K torsion angle dynamics 12 R.KORADI,M.BILLETER,P.GUNTERT refinement OPALP structure solution DYANA 750 Bruker DRX LEU 125 n 1 LEU 125 A GLY 126 n 2 GLY 126 A GLY 127 n 3 GLY 127 A TYR 128 n 4 TYR 128 A MET 129 n 5 MET 129 A LEU 130 n 6 LEU 130 A GLY 131 n 7 GLY 131 A SER 132 n 8 SER 132 A ALA 133 n 9 ALA 133 A MET 134 n 10 MET 134 A SER 135 n 11 SER 135 A ARG 136 n 12 ARG 136 A PRO 137 n 13 PRO 137 A ILE 138 n 14 ILE 138 A ILE 139 n 15 ILE 139 A HIS 140 n 16 HIS 140 A PHE 141 n 17 PHE 141 A GLY 142 n 18 GLY 142 A SER 143 n 19 SER 143 A ASP 144 n 20 ASP 144 A TYR 145 n 21 TYR 145 A GLU 146 n 22 GLU 146 A ASP 147 n 23 ASP 147 A ARG 148 n 24 ARG 148 A TYR 149 n 25 TYR 149 A TYR 150 n 26 TYR 150 A ARG 151 n 27 ARG 151 A GLU 152 n 28 GLU 152 A ASN 153 n 29 ASN 153 A MET 154 n 30 MET 154 A HIS 155 n 31 HIS 155 A ARG 156 n 32 ARG 156 A TYR 157 n 33 TYR 157 A PRO 158 n 34 PRO 158 A ASN 159 n 35 ASN 159 A GLN 160 n 36 GLN 160 A VAL 161 n 37 VAL 161 A TYR 162 n 38 TYR 162 A TYR 163 n 39 TYR 163 A ARG 164 n 40 ARG 164 A PRO 165 n 41 PRO 165 A VAL 166 n 42 VAL 166 A ASP 167 n 43 ASP 167 A GLU 168 n 44 GLU 168 A TYR 169 n 45 TYR 169 A SER 170 n 46 SER 170 A ASN 171 n 47 ASN 171 A GLN 172 n 48 GLN 172 A ASN 173 n 49 ASN 173 A ASN 174 n 50 ASN 174 A PHE 175 n 51 PHE 175 A VAL 176 n 52 VAL 176 A HIS 177 n 53 HIS 177 A ASP 178 n 54 ASP 178 A CYS 179 n 55 CYS 179 A VAL 180 n 56 VAL 180 A ASN 181 n 57 ASN 181 A ILE 182 n 58 ILE 182 A THR 183 n 59 THR 183 A ILE 184 n 60 ILE 184 A LYS 185 n 61 LYS 185 A GLN 186 n 62 GLN 186 A HIS 187 n 63 HIS 187 A THR 188 n 64 THR 188 A VAL 189 n 65 VAL 189 A THR 190 n 66 THR 190 A THR 191 n 67 THR 191 A THR 192 n 68 THR 192 A THR 193 n 69 THR 193 A LYS 194 n 70 LYS 194 A GLY 195 n 71 GLY 195 A GLU 196 n 72 GLU 196 A ASN 197 n 73 ASN 197 A PHE 198 n 74 PHE 198 A THR 199 n 75 THR 199 A GLU 200 n 76 GLU 200 A THR 201 n 77 THR 201 A ASP 202 n 78 ASP 202 A VAL 203 n 79 VAL 203 A LYS 204 n 80 LYS 204 A MET 205 n 81 MET 205 A MET 206 n 82 MET 206 A GLU 207 n 83 GLU 207 A ARG 208 n 84 ARG 208 A VAL 209 n 85 VAL 209 A VAL 210 n 86 VAL 210 A GLU 211 n 87 GLU 211 A GLN 212 n 88 GLN 212 A MET 213 n 89 MET 213 A CYS 214 n 90 CYS 214 A ILE 215 n 91 ILE 215 A THR 216 n 92 THR 216 A GLN 217 n 93 GLN 217 A TYR 218 n 94 TYR 218 A GLU 219 n 95 GLU 219 A ARG 220 n 96 ARG 220 A GLU 221 n 97 GLU 221 A SER 222 n 98 SER 222 A GLN 223 n 99 GLN 223 A ALA 224 n 100 ALA 224 A TYR 225 n 101 TYR 225 A TYR 226 n 102 TYR 226 A GLN 227 n 103 GLN 227 A ARG 228 n 104 ARG 228 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N MET 129 A N MET 5 A O TYR 163 A O TYR 39 1 A A HG1 OD2 THR ASP 199 202 1.58 2 A A O HG1 GLN THR 212 216 1.59 9 A A HH OD2 TYR ASP 169 178 1.53 10 A A HH OD1 TYR ASP 157 202 1.60 11 A A HH OD2 TYR ASP 169 178 1.54 13 A A HH OE2 TYR GLU 163 221 1.59 14 A A HH OD2 TYR ASP 128 178 1.56 16 A A HG OE1 SER GLU 143 146 1.56 16 A A HH OD2 TYR ASP 169 178 1.59 16 A A HG1 O THR GLU 191 196 1.59 20 A A HH OE2 TYR GLU 163 221 1.59 9 A A ASP GLU 167 168 -137.73 13 A A VAL ASP 166 167 146.03 1 A TYR 128 0.109 SIDE CHAIN 1 A ARG 148 0.102 SIDE CHAIN 1 A ARG 151 0.080 SIDE CHAIN 2 A ARG 156 0.079 SIDE CHAIN 2 A ARG 164 0.115 SIDE CHAIN 2 A PHE 198 0.086 SIDE CHAIN 2 A TYR 218 0.071 SIDE CHAIN 2 A ARG 220 0.098 SIDE CHAIN 3 A TYR 225 0.079 SIDE CHAIN 4 A TYR 149 0.070 SIDE CHAIN 4 A TYR 150 0.077 SIDE CHAIN 4 A ARG 151 0.078 SIDE CHAIN 4 A TYR 169 0.104 SIDE CHAIN 7 A ARG 208 0.176 SIDE CHAIN 7 A ARG 220 0.098 SIDE CHAIN 7 A TYR 225 0.091 SIDE CHAIN 9 A TYR 218 0.074 SIDE CHAIN 10 A ARG 148 0.093 SIDE CHAIN 10 A TYR 150 0.078 SIDE CHAIN 10 A ARG 220 0.097 SIDE CHAIN 10 A TYR 225 0.081 SIDE CHAIN 11 A TYR 128 0.075 SIDE CHAIN 11 A ARG 228 0.102 SIDE CHAIN 12 A TYR 128 0.083 SIDE CHAIN 12 A TYR 169 0.090 SIDE CHAIN 13 A TYR 150 0.070 SIDE CHAIN 13 A ARG 156 0.093 SIDE CHAIN 13 A TYR 163 0.123 SIDE CHAIN 13 A ARG 164 0.089 SIDE CHAIN 15 A ARG 164 0.100 SIDE CHAIN 16 A ARG 148 0.096 SIDE CHAIN 17 A TYR 225 0.073 SIDE CHAIN 18 A TYR 128 0.070 SIDE CHAIN 18 A ARG 136 0.079 SIDE CHAIN 18 A ARG 148 0.136 SIDE CHAIN 18 A TYR 162 0.118 SIDE CHAIN 18 A TYR 163 0.114 SIDE CHAIN 18 A ARG 164 0.084 SIDE CHAIN 18 A TYR 218 0.104 SIDE CHAIN 19 A ARG 151 0.117 SIDE CHAIN 19 A TYR 226 0.066 SIDE CHAIN 20 A TYR 128 0.078 SIDE CHAIN 20 A ARG 220 0.124 SIDE CHAIN 3 -3.90 0.60 121.00 117.10 A A A CB CG CD2 TYR TYR TYR 157 157 157 N 6 -4.11 0.50 120.30 116.19 A A A NE CZ NH2 ARG ARG ARG 148 148 148 N 7 -3.34 0.50 120.30 116.96 A A A NE CZ NH2 ARG ARG ARG 164 164 164 N 9 -3.88 0.50 120.30 116.42 A A A NE CZ NH2 ARG ARG ARG 148 148 148 N 9 -3.91 0.60 121.00 117.09 A A A CB CG CD2 TYR TYR TYR 149 149 149 N 10 3.01 0.50 120.30 123.31 A A A NE CZ NH1 ARG ARG ARG 148 148 148 N 13 -4.09 0.60 121.00 116.91 A A A CB CG CD2 TYR TYR TYR 169 169 169 N 18 -3.84 0.60 121.00 117.16 A A A CB CG CD2 TYR TYR TYR 157 157 157 N 19 3.20 0.50 120.30 123.50 A A A NE CZ NH1 ARG ARG ARG 156 156 156 N 1 A HIS 155 -67.64 0.73 1 A ASP 167 -148.54 -47.18 1 A GLU 168 -95.66 -80.32 1 A GLN 172 -92.78 -96.22 1 A TYR 225 -127.57 -57.34 2 A PHE 141 -133.23 -59.44 2 A PRO 165 -70.66 -95.83 2 A ASP 167 -168.72 -57.38 2 A GLN 172 -85.52 -95.40 2 A PHE 198 -47.68 172.62 2 A GLU 219 -67.86 13.28 2 A ARG 220 -108.75 -67.41 2 A TYR 225 -154.40 -48.68 3 A SER 132 -49.67 151.61 3 A SER 135 -69.68 92.97 3 A ARG 136 37.49 77.78 3 A PHE 141 -138.17 -45.48 3 A ASP 167 -107.22 -67.82 3 A GLU 168 -111.34 -84.07 3 A ASN 171 44.91 -172.35 3 A GLN 172 -122.56 -96.93 3 A TYR 225 -139.05 -71.14 4 A ALA 133 -69.83 94.95 4 A ASP 167 -160.09 -39.55 4 A TYR 169 -134.61 -70.57 4 A SER 170 39.48 46.72 4 A GLN 172 -100.23 -77.52 4 A TYR 225 -144.50 -57.74 5 A ASP 167 -128.31 -73.69 5 A TYR 169 -166.79 -37.44 5 A GLN 172 -65.74 -80.29 5 A ARG 220 -113.99 -76.99 5 A TYR 225 -154.07 -56.96 6 A TYR 128 53.55 158.82 6 A SER 135 34.74 -139.05 6 A HIS 155 53.30 -74.37 6 A ARG 156 -160.00 47.12 6 A ASN 159 -141.80 -1.75 6 A VAL 166 -79.58 32.92 6 A SER 170 35.32 70.31 6 A GLN 172 -108.93 -95.90 6 A PHE 198 -49.71 150.76 6 A TYR 225 -140.56 -66.00 7 A ARG 156 -74.15 -71.45 7 A VAL 166 -65.70 40.49 7 A ASP 167 -110.12 -71.49 7 A TYR 169 -151.69 -95.68 7 A SER 170 65.49 122.30 7 A GLN 172 -96.98 -102.37 7 A ASN 197 -164.78 80.17 7 A TYR 225 -141.59 -51.20 8 A ARG 136 -46.68 105.82 8 A GLU 152 -75.26 -77.21 8 A HIS 155 53.91 -72.46 8 A ARG 156 -132.05 -46.26 8 A TYR 157 55.97 170.59 8 A ASN 171 -175.06 138.15 8 A GLN 172 -24.68 -62.74 8 A THR 188 -69.89 0.93 8 A TYR 225 -144.27 -59.37 9 A ARG 136 -30.74 99.93 9 A PHE 141 -130.78 -37.09 9 A PRO 165 -66.09 5.82 9 A VAL 166 81.11 40.47 9 A GLU 168 -152.22 -7.60 9 A SER 170 -168.43 48.00 9 A ASN 171 -59.57 177.18 9 A GLN 172 -81.27 -103.18 9 A GLU 219 -70.62 28.88 9 A TYR 225 -143.96 -71.04 10 A PHE 141 -126.43 -53.42 10 A ASP 167 -145.84 -48.41 10 A SER 170 -43.30 100.08 10 A ASN 171 -112.93 -163.72 10 A GLN 172 -111.40 -102.24 10 A ASN 197 -153.28 83.99 10 A ALA 224 -70.43 30.16 10 A TYR 225 -147.26 -66.26 11 A SER 135 49.32 -141.92 11 A PHE 141 -134.87 -65.42 11 A HIS 155 -78.08 45.43 11 A ARG 156 -163.86 -15.46 11 A PRO 165 -65.04 -162.15 11 A ASP 167 -149.18 -0.77 11 A GLU 168 -137.18 -61.45 11 A GLN 172 -77.20 -102.63 11 A ALA 224 -71.87 29.53 11 A TYR 225 -140.79 -63.25 12 A GLU 168 -154.14 -55.20 12 A SER 170 34.69 76.56 12 A GLN 172 -96.63 -94.52 12 A ASN 197 -156.42 82.99 12 A TYR 225 -142.28 -52.15 13 A ARG 136 -57.48 109.88 13 A PRO 165 -65.85 -94.93 13 A ASP 167 -147.82 -66.74 13 A TYR 169 -54.46 -70.41 13 A SER 170 36.96 45.68 13 A ASN 197 -148.80 23.96 13 A PHE 198 44.91 -167.17 13 A TYR 225 -135.72 -70.68 14 A ASP 167 -142.99 -49.19 14 A TYR 169 -164.85 -43.48 14 A GLN 172 -52.72 -78.08 14 A ASN 197 -150.51 83.55 14 A TYR 225 -142.09 -68.05 15 A SER 132 58.63 -177.63 15 A SER 135 45.57 -158.80 15 A ASP 167 -156.21 -42.45 15 A TYR 169 -154.37 25.94 15 A SER 170 -58.58 70.51 15 A GLN 172 -78.83 -101.39 15 A ASN 197 -155.12 89.73 15 A GLU 219 -68.30 13.92 15 A TYR 225 -135.49 -67.08 16 A TYR 128 -24.71 118.94 16 A TYR 163 -172.43 -174.18 16 A TYR 169 -159.51 55.12 16 A ASN 197 -150.92 86.94 16 A PHE 198 -39.28 117.84 16 A TYR 225 -128.89 -74.47 17 A PHE 141 -137.43 -36.63 17 A ASP 167 -153.81 -45.53 17 A GLU 168 -152.90 71.66 17 A TYR 169 -161.79 -134.04 17 A GLN 172 -73.96 -89.36 17 A TYR 225 -133.60 -63.85 18 A ARG 136 -41.15 101.05 18 A PHE 141 -131.21 -38.61 18 A PRO 165 -73.18 -95.57 18 A VAL 166 -153.29 12.76 18 A GLU 168 -145.76 -46.19 18 A ASN 171 41.34 -158.70 18 A GLN 172 -121.69 -68.85 18 A THR 183 -102.89 -60.97 18 A ASN 197 -156.17 61.05 18 A GLU 200 -36.96 -25.47 18 A TYR 225 -136.80 -64.15 19 A ARG 136 60.05 86.88 19 A ASP 167 -153.43 -41.38 19 A GLU 168 -146.68 -53.53 19 A SER 170 -120.09 -50.43 19 A ASN 171 55.55 -173.55 19 A TYR 225 -146.19 -60.91 20 A GLU 152 -73.32 -82.13 20 A ASN 153 -110.88 57.59 20 A HIS 155 -83.00 46.65 20 A ARG 156 -145.77 -26.49 20 A ASP 167 -138.42 -55.55 20 A SER 170 96.16 -83.89 20 A ASN 171 53.13 -168.59 20 A GLN 172 -64.06 -76.24 20 A ASN 197 -156.42 88.93 20 A TYR 225 -140.97 -61.82 20 A GLN 227 -140.28 11.02 PRION PROTEIN Human prion protein variant M166V 1 N N A ASP 144 A ASP 20 HELX_P A MET 154 A MET 30 1 H1 11 A ASN 173 A ASN 49 HELX_P A LYS 194 A LYS 70 1 H2 22 A GLU 200 A GLU 76 HELX_P A TYR 226 A TYR 102 1 H3 27 disulf 2.031 A CYS 179 A SG CYS 55 1_555 A CYS 214 A SG CYS 90 1_555 PRION PROTEIN PRION PROTEIN P78446 UNP 1 P78446 118 221 1E1G 125 228 P78446 A 1 1 104 1 MET engineered mutation VAL 166 1E1G A P78446 UNP 166 42 2 anti-parallel A TYR 128 A TYR 4 A GLY 131 A GLY 7 A VAL 161 A VAL 37 A ARG 164 A ARG 40 1 P 1