1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Calzolai, L.
Lysek, D.A.
Guntert, P.
Von Schroetter, C.
Zahn, R.
Riek, R.
Wuthrich, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
97
8340
10.1073/PNAS.97.15.8340
10900000
NMR Structures of Three Single-Residue Variants of the Human Prion Protein
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
12527.906
PRION PROTEIN
GLOBULAR DOMAIN 125-228
YES
1
man
polymer
no
no
LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPVDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVK
MMERVVEQMCITQYERESQAYYQR
LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPVDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVK
MMERVVEQMCITQYERESQAYYQR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
562
ESCHERICHIA COLI
repository
Initial release
Version format compliance
Version format compliance
1
0
2000-07-20
1
1
2011-05-08
1
2
2011-07-13
HUMAN PRION PROTEIN VARIANT M166V
HUMAN PRION PROTEIN VARIANT S170N
HUMAN PRION PROTEIN VARIANT S170N
HUMAN PRION PROTEIN VARIANT R220K
HUMAN PRION PROTEIN VARIANT R220K
HELIX
DETERMINATION METHOD: AUTHOR PROVIDED.
SHEET
DETERMINATION METHOD: AUTHOR PROVIDED.
PDBE
Y
PDBE
2000-05-04
REL
THE CHAIN A ENGINEERED MUTATION MET166VAL
20
20
50 MM SODIUM ACETATE
4.5
pH
293
K
torsion angle dynamics
12
R.KORADI,M.BILLETER,P.GUNTERT
refinement
OPALP
structure solution
DYANA
750
Bruker
DRX
LEU
125
n
1
LEU
125
A
GLY
126
n
2
GLY
126
A
GLY
127
n
3
GLY
127
A
TYR
128
n
4
TYR
128
A
MET
129
n
5
MET
129
A
LEU
130
n
6
LEU
130
A
GLY
131
n
7
GLY
131
A
SER
132
n
8
SER
132
A
ALA
133
n
9
ALA
133
A
MET
134
n
10
MET
134
A
SER
135
n
11
SER
135
A
ARG
136
n
12
ARG
136
A
PRO
137
n
13
PRO
137
A
ILE
138
n
14
ILE
138
A
ILE
139
n
15
ILE
139
A
HIS
140
n
16
HIS
140
A
PHE
141
n
17
PHE
141
A
GLY
142
n
18
GLY
142
A
SER
143
n
19
SER
143
A
ASP
144
n
20
ASP
144
A
TYR
145
n
21
TYR
145
A
GLU
146
n
22
GLU
146
A
ASP
147
n
23
ASP
147
A
ARG
148
n
24
ARG
148
A
TYR
149
n
25
TYR
149
A
TYR
150
n
26
TYR
150
A
ARG
151
n
27
ARG
151
A
GLU
152
n
28
GLU
152
A
ASN
153
n
29
ASN
153
A
MET
154
n
30
MET
154
A
HIS
155
n
31
HIS
155
A
ARG
156
n
32
ARG
156
A
TYR
157
n
33
TYR
157
A
PRO
158
n
34
PRO
158
A
ASN
159
n
35
ASN
159
A
GLN
160
n
36
GLN
160
A
VAL
161
n
37
VAL
161
A
TYR
162
n
38
TYR
162
A
TYR
163
n
39
TYR
163
A
ARG
164
n
40
ARG
164
A
PRO
165
n
41
PRO
165
A
VAL
166
n
42
VAL
166
A
ASP
167
n
43
ASP
167
A
GLU
168
n
44
GLU
168
A
TYR
169
n
45
TYR
169
A
SER
170
n
46
SER
170
A
ASN
171
n
47
ASN
171
A
GLN
172
n
48
GLN
172
A
ASN
173
n
49
ASN
173
A
ASN
174
n
50
ASN
174
A
PHE
175
n
51
PHE
175
A
VAL
176
n
52
VAL
176
A
HIS
177
n
53
HIS
177
A
ASP
178
n
54
ASP
178
A
CYS
179
n
55
CYS
179
A
VAL
180
n
56
VAL
180
A
ASN
181
n
57
ASN
181
A
ILE
182
n
58
ILE
182
A
THR
183
n
59
THR
183
A
ILE
184
n
60
ILE
184
A
LYS
185
n
61
LYS
185
A
GLN
186
n
62
GLN
186
A
HIS
187
n
63
HIS
187
A
THR
188
n
64
THR
188
A
VAL
189
n
65
VAL
189
A
THR
190
n
66
THR
190
A
THR
191
n
67
THR
191
A
THR
192
n
68
THR
192
A
THR
193
n
69
THR
193
A
LYS
194
n
70
LYS
194
A
GLY
195
n
71
GLY
195
A
GLU
196
n
72
GLU
196
A
ASN
197
n
73
ASN
197
A
PHE
198
n
74
PHE
198
A
THR
199
n
75
THR
199
A
GLU
200
n
76
GLU
200
A
THR
201
n
77
THR
201
A
ASP
202
n
78
ASP
202
A
VAL
203
n
79
VAL
203
A
LYS
204
n
80
LYS
204
A
MET
205
n
81
MET
205
A
MET
206
n
82
MET
206
A
GLU
207
n
83
GLU
207
A
ARG
208
n
84
ARG
208
A
VAL
209
n
85
VAL
209
A
VAL
210
n
86
VAL
210
A
GLU
211
n
87
GLU
211
A
GLN
212
n
88
GLN
212
A
MET
213
n
89
MET
213
A
CYS
214
n
90
CYS
214
A
ILE
215
n
91
ILE
215
A
THR
216
n
92
THR
216
A
GLN
217
n
93
GLN
217
A
TYR
218
n
94
TYR
218
A
GLU
219
n
95
GLU
219
A
ARG
220
n
96
ARG
220
A
GLU
221
n
97
GLU
221
A
SER
222
n
98
SER
222
A
GLN
223
n
99
GLN
223
A
ALA
224
n
100
ALA
224
A
TYR
225
n
101
TYR
225
A
TYR
226
n
102
TYR
226
A
GLN
227
n
103
GLN
227
A
ARG
228
n
104
ARG
228
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
MET
129
A
N
MET
5
A
O
TYR
163
A
O
TYR
39
1
A
A
HG1
OD2
THR
ASP
199
202
1.58
2
A
A
O
HG1
GLN
THR
212
216
1.59
9
A
A
HH
OD2
TYR
ASP
169
178
1.53
10
A
A
HH
OD1
TYR
ASP
157
202
1.60
11
A
A
HH
OD2
TYR
ASP
169
178
1.54
13
A
A
HH
OE2
TYR
GLU
163
221
1.59
14
A
A
HH
OD2
TYR
ASP
128
178
1.56
16
A
A
HG
OE1
SER
GLU
143
146
1.56
16
A
A
HH
OD2
TYR
ASP
169
178
1.59
16
A
A
HG1
O
THR
GLU
191
196
1.59
20
A
A
HH
OE2
TYR
GLU
163
221
1.59
9
A
A
ASP
GLU
167
168
-137.73
13
A
A
VAL
ASP
166
167
146.03
1
A
TYR
128
0.109
SIDE CHAIN
1
A
ARG
148
0.102
SIDE CHAIN
1
A
ARG
151
0.080
SIDE CHAIN
2
A
ARG
156
0.079
SIDE CHAIN
2
A
ARG
164
0.115
SIDE CHAIN
2
A
PHE
198
0.086
SIDE CHAIN
2
A
TYR
218
0.071
SIDE CHAIN
2
A
ARG
220
0.098
SIDE CHAIN
3
A
TYR
225
0.079
SIDE CHAIN
4
A
TYR
149
0.070
SIDE CHAIN
4
A
TYR
150
0.077
SIDE CHAIN
4
A
ARG
151
0.078
SIDE CHAIN
4
A
TYR
169
0.104
SIDE CHAIN
7
A
ARG
208
0.176
SIDE CHAIN
7
A
ARG
220
0.098
SIDE CHAIN
7
A
TYR
225
0.091
SIDE CHAIN
9
A
TYR
218
0.074
SIDE CHAIN
10
A
ARG
148
0.093
SIDE CHAIN
10
A
TYR
150
0.078
SIDE CHAIN
10
A
ARG
220
0.097
SIDE CHAIN
10
A
TYR
225
0.081
SIDE CHAIN
11
A
TYR
128
0.075
SIDE CHAIN
11
A
ARG
228
0.102
SIDE CHAIN
12
A
TYR
128
0.083
SIDE CHAIN
12
A
TYR
169
0.090
SIDE CHAIN
13
A
TYR
150
0.070
SIDE CHAIN
13
A
ARG
156
0.093
SIDE CHAIN
13
A
TYR
163
0.123
SIDE CHAIN
13
A
ARG
164
0.089
SIDE CHAIN
15
A
ARG
164
0.100
SIDE CHAIN
16
A
ARG
148
0.096
SIDE CHAIN
17
A
TYR
225
0.073
SIDE CHAIN
18
A
TYR
128
0.070
SIDE CHAIN
18
A
ARG
136
0.079
SIDE CHAIN
18
A
ARG
148
0.136
SIDE CHAIN
18
A
TYR
162
0.118
SIDE CHAIN
18
A
TYR
163
0.114
SIDE CHAIN
18
A
ARG
164
0.084
SIDE CHAIN
18
A
TYR
218
0.104
SIDE CHAIN
19
A
ARG
151
0.117
SIDE CHAIN
19
A
TYR
226
0.066
SIDE CHAIN
20
A
TYR
128
0.078
SIDE CHAIN
20
A
ARG
220
0.124
SIDE CHAIN
3
-3.90
0.60
121.00
117.10
A
A
A
CB
CG
CD2
TYR
TYR
TYR
157
157
157
N
6
-4.11
0.50
120.30
116.19
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
148
148
148
N
7
-3.34
0.50
120.30
116.96
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
164
164
164
N
9
-3.88
0.50
120.30
116.42
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
148
148
148
N
9
-3.91
0.60
121.00
117.09
A
A
A
CB
CG
CD2
TYR
TYR
TYR
149
149
149
N
10
3.01
0.50
120.30
123.31
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
148
148
148
N
13
-4.09
0.60
121.00
116.91
A
A
A
CB
CG
CD2
TYR
TYR
TYR
169
169
169
N
18
-3.84
0.60
121.00
117.16
A
A
A
CB
CG
CD2
TYR
TYR
TYR
157
157
157
N
19
3.20
0.50
120.30
123.50
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
156
156
156
N
1
A
HIS
155
-67.64
0.73
1
A
ASP
167
-148.54
-47.18
1
A
GLU
168
-95.66
-80.32
1
A
GLN
172
-92.78
-96.22
1
A
TYR
225
-127.57
-57.34
2
A
PHE
141
-133.23
-59.44
2
A
PRO
165
-70.66
-95.83
2
A
ASP
167
-168.72
-57.38
2
A
GLN
172
-85.52
-95.40
2
A
PHE
198
-47.68
172.62
2
A
GLU
219
-67.86
13.28
2
A
ARG
220
-108.75
-67.41
2
A
TYR
225
-154.40
-48.68
3
A
SER
132
-49.67
151.61
3
A
SER
135
-69.68
92.97
3
A
ARG
136
37.49
77.78
3
A
PHE
141
-138.17
-45.48
3
A
ASP
167
-107.22
-67.82
3
A
GLU
168
-111.34
-84.07
3
A
ASN
171
44.91
-172.35
3
A
GLN
172
-122.56
-96.93
3
A
TYR
225
-139.05
-71.14
4
A
ALA
133
-69.83
94.95
4
A
ASP
167
-160.09
-39.55
4
A
TYR
169
-134.61
-70.57
4
A
SER
170
39.48
46.72
4
A
GLN
172
-100.23
-77.52
4
A
TYR
225
-144.50
-57.74
5
A
ASP
167
-128.31
-73.69
5
A
TYR
169
-166.79
-37.44
5
A
GLN
172
-65.74
-80.29
5
A
ARG
220
-113.99
-76.99
5
A
TYR
225
-154.07
-56.96
6
A
TYR
128
53.55
158.82
6
A
SER
135
34.74
-139.05
6
A
HIS
155
53.30
-74.37
6
A
ARG
156
-160.00
47.12
6
A
ASN
159
-141.80
-1.75
6
A
VAL
166
-79.58
32.92
6
A
SER
170
35.32
70.31
6
A
GLN
172
-108.93
-95.90
6
A
PHE
198
-49.71
150.76
6
A
TYR
225
-140.56
-66.00
7
A
ARG
156
-74.15
-71.45
7
A
VAL
166
-65.70
40.49
7
A
ASP
167
-110.12
-71.49
7
A
TYR
169
-151.69
-95.68
7
A
SER
170
65.49
122.30
7
A
GLN
172
-96.98
-102.37
7
A
ASN
197
-164.78
80.17
7
A
TYR
225
-141.59
-51.20
8
A
ARG
136
-46.68
105.82
8
A
GLU
152
-75.26
-77.21
8
A
HIS
155
53.91
-72.46
8
A
ARG
156
-132.05
-46.26
8
A
TYR
157
55.97
170.59
8
A
ASN
171
-175.06
138.15
8
A
GLN
172
-24.68
-62.74
8
A
THR
188
-69.89
0.93
8
A
TYR
225
-144.27
-59.37
9
A
ARG
136
-30.74
99.93
9
A
PHE
141
-130.78
-37.09
9
A
PRO
165
-66.09
5.82
9
A
VAL
166
81.11
40.47
9
A
GLU
168
-152.22
-7.60
9
A
SER
170
-168.43
48.00
9
A
ASN
171
-59.57
177.18
9
A
GLN
172
-81.27
-103.18
9
A
GLU
219
-70.62
28.88
9
A
TYR
225
-143.96
-71.04
10
A
PHE
141
-126.43
-53.42
10
A
ASP
167
-145.84
-48.41
10
A
SER
170
-43.30
100.08
10
A
ASN
171
-112.93
-163.72
10
A
GLN
172
-111.40
-102.24
10
A
ASN
197
-153.28
83.99
10
A
ALA
224
-70.43
30.16
10
A
TYR
225
-147.26
-66.26
11
A
SER
135
49.32
-141.92
11
A
PHE
141
-134.87
-65.42
11
A
HIS
155
-78.08
45.43
11
A
ARG
156
-163.86
-15.46
11
A
PRO
165
-65.04
-162.15
11
A
ASP
167
-149.18
-0.77
11
A
GLU
168
-137.18
-61.45
11
A
GLN
172
-77.20
-102.63
11
A
ALA
224
-71.87
29.53
11
A
TYR
225
-140.79
-63.25
12
A
GLU
168
-154.14
-55.20
12
A
SER
170
34.69
76.56
12
A
GLN
172
-96.63
-94.52
12
A
ASN
197
-156.42
82.99
12
A
TYR
225
-142.28
-52.15
13
A
ARG
136
-57.48
109.88
13
A
PRO
165
-65.85
-94.93
13
A
ASP
167
-147.82
-66.74
13
A
TYR
169
-54.46
-70.41
13
A
SER
170
36.96
45.68
13
A
ASN
197
-148.80
23.96
13
A
PHE
198
44.91
-167.17
13
A
TYR
225
-135.72
-70.68
14
A
ASP
167
-142.99
-49.19
14
A
TYR
169
-164.85
-43.48
14
A
GLN
172
-52.72
-78.08
14
A
ASN
197
-150.51
83.55
14
A
TYR
225
-142.09
-68.05
15
A
SER
132
58.63
-177.63
15
A
SER
135
45.57
-158.80
15
A
ASP
167
-156.21
-42.45
15
A
TYR
169
-154.37
25.94
15
A
SER
170
-58.58
70.51
15
A
GLN
172
-78.83
-101.39
15
A
ASN
197
-155.12
89.73
15
A
GLU
219
-68.30
13.92
15
A
TYR
225
-135.49
-67.08
16
A
TYR
128
-24.71
118.94
16
A
TYR
163
-172.43
-174.18
16
A
TYR
169
-159.51
55.12
16
A
ASN
197
-150.92
86.94
16
A
PHE
198
-39.28
117.84
16
A
TYR
225
-128.89
-74.47
17
A
PHE
141
-137.43
-36.63
17
A
ASP
167
-153.81
-45.53
17
A
GLU
168
-152.90
71.66
17
A
TYR
169
-161.79
-134.04
17
A
GLN
172
-73.96
-89.36
17
A
TYR
225
-133.60
-63.85
18
A
ARG
136
-41.15
101.05
18
A
PHE
141
-131.21
-38.61
18
A
PRO
165
-73.18
-95.57
18
A
VAL
166
-153.29
12.76
18
A
GLU
168
-145.76
-46.19
18
A
ASN
171
41.34
-158.70
18
A
GLN
172
-121.69
-68.85
18
A
THR
183
-102.89
-60.97
18
A
ASN
197
-156.17
61.05
18
A
GLU
200
-36.96
-25.47
18
A
TYR
225
-136.80
-64.15
19
A
ARG
136
60.05
86.88
19
A
ASP
167
-153.43
-41.38
19
A
GLU
168
-146.68
-53.53
19
A
SER
170
-120.09
-50.43
19
A
ASN
171
55.55
-173.55
19
A
TYR
225
-146.19
-60.91
20
A
GLU
152
-73.32
-82.13
20
A
ASN
153
-110.88
57.59
20
A
HIS
155
-83.00
46.65
20
A
ARG
156
-145.77
-26.49
20
A
ASP
167
-138.42
-55.55
20
A
SER
170
96.16
-83.89
20
A
ASN
171
53.13
-168.59
20
A
GLN
172
-64.06
-76.24
20
A
ASN
197
-156.42
88.93
20
A
TYR
225
-140.97
-61.82
20
A
GLN
227
-140.28
11.02
PRION PROTEIN
Human prion protein variant M166V
1
N
N
A
ASP
144
A
ASP
20
HELX_P
A
MET
154
A
MET
30
1
H1
11
A
ASN
173
A
ASN
49
HELX_P
A
LYS
194
A
LYS
70
1
H2
22
A
GLU
200
A
GLU
76
HELX_P
A
TYR
226
A
TYR
102
1
H3
27
disulf
2.031
A
CYS
179
A
SG
CYS
55
1_555
A
CYS
214
A
SG
CYS
90
1_555
PRION PROTEIN
PRION PROTEIN
P78446
UNP
1
P78446
118
221
1E1G
125
228
P78446
A
1
1
104
1
MET
engineered mutation
VAL
166
1E1G
A
P78446
UNP
166
42
2
anti-parallel
A
TYR
128
A
TYR
4
A
GLY
131
A
GLY
7
A
VAL
161
A
VAL
37
A
ARG
164
A
ARG
40
1
P 1