1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Calzolai, L.
Lysek, D.A.
Guntert, P.
Von Schroetter, C.
Zahn, R.
Riek, R.
Wuthrich, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
97
8340
10.1073/PNAS.97.15.8340
10900000
NMR Structures of Three Single-Residue Variants of the Human Prion Protein
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
12586.996
PRION PROTEIN
GLOBULAR DOMAIN RESIDUES 125-228
YES
1
man
polymer
no
no
LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYNNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVK
MMERVVEQMCITQYERESQAYYQR
LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYNNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVK
MMERVVEQMCITQYERESQAYYQR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
562
ESCHERICHIA COLI
repository
Initial release
Version format compliance
Version format compliance
1
0
2000-07-20
1
1
2011-05-08
1
2
2011-07-13
HUMAN PRION PROTEIN VARIANT M166V
HUMAN PRION PROTEIN VARIANT M166V
HUMAN PRION PROTEIN VARIANT S170N
HUMAN PRION PROTEIN VARIANT R220K
HUMAN PRION PROTEIN VARIANT R220K
HELIX
DETERMINATION METHOD: AUTHOR PROVIDED.
SHEET
DETERMINATION METHOD: AUTHOR PROVIDED.
PDBE
Y
PDBE
2000-05-09
REL
CHAIN A ENGINEERED MUATATION SER170ASN
20
20
50 MM SODIUM ACETATE
4.5
pH
293
K
torsion angle dynamics
9
R.KORADI,M.BILLETER,P.GUNTERT
refinement
OPALP
structure solution
DYANA
750
Bruker
DRX
LEU
125
n
1
LEU
125
A
GLY
126
n
2
GLY
126
A
GLY
127
n
3
GLY
127
A
TYR
128
n
4
TYR
128
A
MET
129
n
5
MET
129
A
LEU
130
n
6
LEU
130
A
GLY
131
n
7
GLY
131
A
SER
132
n
8
SER
132
A
ALA
133
n
9
ALA
133
A
MET
134
n
10
MET
134
A
SER
135
n
11
SER
135
A
ARG
136
n
12
ARG
136
A
PRO
137
n
13
PRO
137
A
ILE
138
n
14
ILE
138
A
ILE
139
n
15
ILE
139
A
HIS
140
n
16
HIS
140
A
PHE
141
n
17
PHE
141
A
GLY
142
n
18
GLY
142
A
SER
143
n
19
SER
143
A
ASP
144
n
20
ASP
144
A
TYR
145
n
21
TYR
145
A
GLU
146
n
22
GLU
146
A
ASP
147
n
23
ASP
147
A
ARG
148
n
24
ARG
148
A
TYR
149
n
25
TYR
149
A
TYR
150
n
26
TYR
150
A
ARG
151
n
27
ARG
151
A
GLU
152
n
28
GLU
152
A
ASN
153
n
29
ASN
153
A
MET
154
n
30
MET
154
A
HIS
155
n
31
HIS
155
A
ARG
156
n
32
ARG
156
A
TYR
157
n
33
TYR
157
A
PRO
158
n
34
PRO
158
A
ASN
159
n
35
ASN
159
A
GLN
160
n
36
GLN
160
A
VAL
161
n
37
VAL
161
A
TYR
162
n
38
TYR
162
A
TYR
163
n
39
TYR
163
A
ARG
164
n
40
ARG
164
A
PRO
165
n
41
PRO
165
A
MET
166
n
42
MET
166
A
ASP
167
n
43
ASP
167
A
GLU
168
n
44
GLU
168
A
TYR
169
n
45
TYR
169
A
ASN
170
n
46
ASN
170
A
ASN
171
n
47
ASN
171
A
GLN
172
n
48
GLN
172
A
ASN
173
n
49
ASN
173
A
ASN
174
n
50
ASN
174
A
PHE
175
n
51
PHE
175
A
VAL
176
n
52
VAL
176
A
HIS
177
n
53
HIS
177
A
ASP
178
n
54
ASP
178
A
CYS
179
n
55
CYS
179
A
VAL
180
n
56
VAL
180
A
ASN
181
n
57
ASN
181
A
ILE
182
n
58
ILE
182
A
THR
183
n
59
THR
183
A
ILE
184
n
60
ILE
184
A
LYS
185
n
61
LYS
185
A
GLN
186
n
62
GLN
186
A
HIS
187
n
63
HIS
187
A
THR
188
n
64
THR
188
A
VAL
189
n
65
VAL
189
A
THR
190
n
66
THR
190
A
THR
191
n
67
THR
191
A
THR
192
n
68
THR
192
A
THR
193
n
69
THR
193
A
LYS
194
n
70
LYS
194
A
GLY
195
n
71
GLY
195
A
GLU
196
n
72
GLU
196
A
ASN
197
n
73
ASN
197
A
PHE
198
n
74
PHE
198
A
THR
199
n
75
THR
199
A
GLU
200
n
76
GLU
200
A
THR
201
n
77
THR
201
A
ASP
202
n
78
ASP
202
A
VAL
203
n
79
VAL
203
A
LYS
204
n
80
LYS
204
A
MET
205
n
81
MET
205
A
MET
206
n
82
MET
206
A
GLU
207
n
83
GLU
207
A
ARG
208
n
84
ARG
208
A
VAL
209
n
85
VAL
209
A
VAL
210
n
86
VAL
210
A
GLU
211
n
87
GLU
211
A
GLN
212
n
88
GLN
212
A
MET
213
n
89
MET
213
A
CYS
214
n
90
CYS
214
A
ILE
215
n
91
ILE
215
A
THR
216
n
92
THR
216
A
GLN
217
n
93
GLN
217
A
TYR
218
n
94
TYR
218
A
GLU
219
n
95
GLU
219
A
ARG
220
n
96
ARG
220
A
GLU
221
n
97
GLU
221
A
SER
222
n
98
SER
222
A
GLN
223
n
99
GLN
223
A
ALA
224
n
100
ALA
224
A
TYR
225
n
101
TYR
225
A
TYR
226
n
102
TYR
226
A
GLN
227
n
103
GLN
227
A
ARG
228
n
104
ARG
228
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
MET
129
A
N
MET
5
A
O
TYR
163
A
O
TYR
39
2
A
A
HH
OE1
TYR
GLU
163
221
1.59
8
A
A
HH
OE2
TYR
GLU
163
221
1.56
17
A
A
HH
OD2
TYR
ASP
169
178
1.59
5
A
A
ASN
MET
153
154
-144.93
8
A
A
GLY
SER
131
132
-134.93
8
A
A
MET
ASP
166
167
-147.79
11
A
A
ARG
PRO
164
165
149.24
1
A
TYR
128
0.083
SIDE CHAIN
1
A
PHE
175
0.081
SIDE CHAIN
1
A
ARG
228
0.089
SIDE CHAIN
2
A
PHE
175
0.085
SIDE CHAIN
2
A
ARG
220
0.081
SIDE CHAIN
3
A
TYR
150
0.085
SIDE CHAIN
3
A
TYR
169
0.076
SIDE CHAIN
4
A
ARG
136
0.085
SIDE CHAIN
4
A
PHE
141
0.085
SIDE CHAIN
4
A
ARG
148
0.107
SIDE CHAIN
4
A
TYR
149
0.089
SIDE CHAIN
4
A
ARG
151
0.123
SIDE CHAIN
5
A
PHE
175
0.079
SIDE CHAIN
5
A
ARG
208
0.087
SIDE CHAIN
6
A
TYR
145
0.061
SIDE CHAIN
6
A
ARG
148
0.085
SIDE CHAIN
6
A
ARG
208
0.123
SIDE CHAIN
7
A
ARG
148
0.075
SIDE CHAIN
7
A
ARG
228
0.096
SIDE CHAIN
8
A
ARG
151
0.097
SIDE CHAIN
8
A
ARG
228
0.082
SIDE CHAIN
10
A
TYR
145
0.066
SIDE CHAIN
10
A
ARG
208
0.134
SIDE CHAIN
11
A
TYR
145
0.069
SIDE CHAIN
11
A
ARG
148
0.082
SIDE CHAIN
11
A
TYR
157
0.086
SIDE CHAIN
11
A
TYR
169
0.071
SIDE CHAIN
12
A
ARG
136
0.131
SIDE CHAIN
12
A
TYR
145
0.085
SIDE CHAIN
12
A
TYR
218
0.079
SIDE CHAIN
13
A
ARG
148
0.130
SIDE CHAIN
13
A
ARG
208
0.101
SIDE CHAIN
14
A
ARG
136
0.121
SIDE CHAIN
14
A
TYR
169
0.071
SIDE CHAIN
14
A
ARG
220
0.104
SIDE CHAIN
15
A
TYR
169
0.086
SIDE CHAIN
16
A
TYR
150
0.096
SIDE CHAIN
16
A
TYR
162
0.071
SIDE CHAIN
16
A
ARG
220
0.076
SIDE CHAIN
17
A
TYR
145
0.069
SIDE CHAIN
17
A
TYR
149
0.090
SIDE CHAIN
17
A
PHE
175
0.095
SIDE CHAIN
18
A
TYR
145
0.129
SIDE CHAIN
18
A
TYR
150
0.089
SIDE CHAIN
18
A
ARG
208
0.078
SIDE CHAIN
19
A
TYR
145
0.073
SIDE CHAIN
19
A
ARG
148
0.076
SIDE CHAIN
19
A
TYR
149
0.109
SIDE CHAIN
19
A
ARG
164
0.078
SIDE CHAIN
20
A
TYR
162
0.073
SIDE CHAIN
20
A
TYR
169
0.077
SIDE CHAIN
20
A
ARG
208
0.085
SIDE CHAIN
2
7.00
1.10
114.20
121.20
A
A
A
CA
CB
SG
CYS
CYS
CYS
179
179
179
N
11
-3.67
0.60
121.00
117.33
A
A
A
CB
CG
CD2
TYR
TYR
TYR
218
218
218
N
12
-6.63
0.60
121.00
114.37
A
A
A
CB
CG
CD1
TYR
TYR
TYR
226
226
226
N
14
7.46
1.10
114.20
121.66
A
A
A
CA
CB
SG
CYS
CYS
CYS
214
214
214
N
14
-3.20
0.50
120.30
117.10
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
220
220
220
N
17
-4.22
0.60
121.00
116.78
A
A
A
CB
CG
CD2
TYR
TYR
TYR
157
157
157
N
17
6.79
1.10
114.20
120.99
A
A
A
CA
CB
SG
CYS
CYS
CYS
179
179
179
N
19
-3.45
0.50
120.30
116.85
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
220
220
220
N
1
A
SER
135
-71.07
-166.85
1
A
MET
154
-58.43
-86.84
1
A
HIS
155
34.35
-85.50
1
A
MET
166
-43.47
-82.65
1
A
GLU
168
95.47
-23.38
1
A
ASN
170
-34.69
120.91
2
A
MET
134
-126.71
-164.10
2
A
MET
154
-33.66
-75.70
2
A
HIS
155
34.76
-71.13
2
A
MET
166
-41.40
100.87
2
A
GLU
168
69.95
-16.02
3
A
SER
135
-59.93
173.66
3
A
MET
154
-41.03
-73.33
3
A
HIS
155
36.66
-73.68
3
A
TYR
163
-175.46
-178.39
3
A
GLU
168
-163.22
-32.70
3
A
ASN
170
35.54
71.05
3
A
GLN
172
-121.25
-73.04
4
A
MET
154
-38.22
-79.38
4
A
HIS
155
33.03
-87.76
4
A
GLU
168
70.58
-27.07
4
A
ASN
197
-78.46
24.82
5
A
LEU
130
-93.70
45.80
5
A
SER
135
-79.22
-153.29
5
A
MET
154
-24.69
-82.32
5
A
HIS
155
33.46
-70.10
5
A
PRO
158
-61.76
-176.96
5
A
ASN
159
-138.15
-33.11
5
A
MET
166
-29.36
-67.25
5
A
ASP
167
38.22
30.75
5
A
TYR
169
-142.08
-38.38
5
A
GLN
172
-67.36
-73.98
5
A
LYS
194
-155.34
15.35
5
A
GLU
196
-30.62
134.24
6
A
SER
135
-68.82
-166.68
6
A
MET
154
-37.21
-81.56
6
A
HIS
155
34.78
-94.06
6
A
ASP
167
166.76
-37.96
6
A
GLU
168
-149.71
-35.94
6
A
ASN
170
52.35
-161.28
6
A
ASN
171
49.92
-162.82
7
A
SER
135
-74.91
-163.35
7
A
PRO
137
-69.66
-171.69
7
A
MET
154
-24.64
-80.23
7
A
HIS
155
33.56
-84.34
7
A
MET
166
-62.10
99.23
7
A
ASP
167
-81.53
46.09
7
A
GLU
168
63.53
-4.54
7
A
ASN
171
-141.25
-68.71
7
A
GLN
172
-120.20
-75.94
7
A
THR
192
-67.72
6.72
8
A
SER
135
-72.04
-161.29
8
A
MET
154
-36.57
-76.67
8
A
HIS
155
33.66
-74.84
8
A
PRO
158
-55.83
174.06
8
A
ASP
167
151.39
-32.36
8
A
GLU
168
-156.79
-45.40
8
A
ASN
170
52.09
174.31
8
A
ASN
171
85.23
143.83
8
A
PHE
175
-65.73
6.41
8
A
LYS
194
-143.22
24.52
8
A
PHE
198
24.86
75.24
9
A
MET
134
-69.87
-175.81
9
A
SER
135
-70.62
-153.08
9
A
MET
154
-29.07
-74.82
9
A
HIS
155
35.54
-78.14
9
A
ASN
159
-146.76
-48.82
9
A
ASP
167
171.07
-50.60
9
A
GLU
168
167.75
-35.36
9
A
ASN
171
-161.99
-166.17
9
A
GLN
172
-74.37
-75.93
9
A
LYS
194
-143.44
16.94
10
A
MET
154
-62.50
-101.44
10
A
HIS
155
35.42
-88.48
10
A
ASN
159
-131.32
-42.83
10
A
MET
166
-48.24
154.68
10
A
ASP
167
174.62
-48.35
10
A
GLU
168
-151.21
-46.61
10
A
ASN
170
33.83
78.33
10
A
GLN
172
-99.13
-75.35
10
A
THR
199
-57.14
172.65
11
A
SER
135
-57.57
173.94
11
A
MET
154
-29.77
-76.85
11
A
HIS
155
32.97
-93.79
11
A
PHE
198
-64.25
94.72
12
A
SER
135
-66.46
-167.00
12
A
MET
154
-31.48
-71.22
12
A
HIS
155
32.99
-93.48
12
A
PRO
165
-68.23
-170.09
12
A
MET
166
-45.48
82.25
12
A
GLU
168
81.27
-40.85
12
A
ASN
171
49.38
-147.87
12
A
GLN
172
-113.60
-71.81
13
A
LEU
130
-96.21
51.28
13
A
SER
135
-64.80
-169.96
13
A
MET
154
-35.06
-92.79
13
A
HIS
155
32.63
-82.75
13
A
GLU
168
-164.73
-33.15
13
A
TYR
169
-24.33
-34.49
13
A
ASN
170
34.44
109.33
13
A
GLN
172
-95.00
-75.14
13
A
THR
192
-59.65
-5.73
13
A
LYS
194
-149.46
22.51
14
A
MET
154
-34.87
-78.52
14
A
HIS
155
32.39
-84.23
14
A
MET
166
46.79
-104.17
14
A
ASP
167
33.86
56.59
14
A
ASN
171
95.42
160.59
14
A
VAL
176
-117.52
-74.13
15
A
SER
135
-70.53
-151.44
15
A
TYR
149
-44.97
-70.96
15
A
MET
154
-34.06
-73.41
15
A
HIS
155
33.07
-84.98
15
A
TYR
163
-176.83
-177.54
15
A
ASP
167
61.65
-29.18
15
A
GLU
168
-170.35
-17.85
15
A
ASN
170
51.55
-157.43
15
A
ASN
171
88.37
169.39
15
A
GLN
172
-105.62
-70.46
15
A
ASN
181
-67.84
1.82
16
A
SER
135
-68.71
-168.97
16
A
PHE
141
-135.42
-55.83
16
A
MET
154
-32.33
-70.67
16
A
HIS
155
34.67
-75.53
16
A
MET
166
47.61
-169.15
16
A
ASP
167
-176.44
-36.90
16
A
GLU
168
154.48
-60.83
16
A
ASN
170
50.74
-95.83
16
A
ASN
171
52.45
168.88
16
A
GLN
172
-86.51
-75.96
16
A
PHE
198
-64.94
95.78
17
A
TYR
128
51.95
178.89
17
A
SER
135
-76.30
-164.79
17
A
PHE
141
-144.80
-40.70
17
A
MET
154
-25.54
-85.86
17
A
HIS
155
35.24
-81.02
17
A
MET
166
-48.53
91.03
17
A
TYR
169
-166.92
-24.23
17
A
ASN
171
-171.29
-168.33
17
A
GLN
172
-92.90
-75.99
17
A
ASN
181
-68.59
0.92
17
A
GLU
196
-66.42
-177.89
17
A
PHE
198
-67.96
96.67
18
A
SER
135
-73.46
-161.22
18
A
PHE
141
-142.48
-0.15
18
A
MET
154
-40.12
-81.14
18
A
HIS
155
38.12
-71.42
18
A
ASN
159
-136.00
-41.00
18
A
ASP
167
-170.73
-45.85
18
A
GLU
168
-166.55
-30.36
18
A
ASN
170
43.95
8.04
18
A
PHE
175
-67.45
11.08
18
A
VAL
176
-121.44
-77.80
18
A
ASN
181
-62.58
3.30
18
A
ASN
197
-116.62
61.64
19
A
SER
135
-73.56
-162.92
19
A
PRO
137
-71.15
-166.72
19
A
PHE
141
-139.39
-33.39
19
A
MET
154
-37.82
-75.21
19
A
HIS
155
34.50
-98.88
19
A
TYR
157
-38.78
131.70
19
A
ASP
167
-74.65
46.65
19
A
GLU
168
95.85
-15.21
19
A
ASN
171
-174.96
-81.03
19
A
GLN
172
-122.49
-63.44
19
A
PHE
198
24.57
75.80
20
A
MET
134
-66.27
-176.86
20
A
SER
135
-60.05
-156.39
20
A
PHE
141
-135.56
-57.62
20
A
MET
154
-25.07
-75.91
20
A
HIS
155
34.44
-77.04
20
A
ASN
159
-147.69
-44.12
20
A
ASP
167
44.40
26.85
20
A
GLU
168
62.50
-25.65
20
A
ASN
170
-48.30
163.51
20
A
ASN
171
-154.08
-157.99
20
A
GLN
172
-83.33
-75.86
20
A
GLU
196
24.30
75.57
PRION PROTEIN
Human prion protein variant S170N
1
N
N
A
ASP
144
A
ASP
20
HELX_P
A
MET
154
A
MET
30
1
H1
11
A
ASN
173
A
ASN
49
HELX_P
A
LYS
194
A
LYS
70
1
H2
22
A
GLU
200
A
GLU
76
HELX_P
A
TYR
226
A
TYR
102
1
H3
27
disulf
2.026
A
CYS
179
A
SG
CYS
55
1_555
A
CYS
214
A
SG
CYS
90
1_555
PRION PROTEIN
PRION PROTEIN
P78446
UNP
1
P78446
118
221
1E1P
125
228
P78446
A
1
1
104
1
SER
engineered mutation
ASN
170
1E1P
A
P78446
UNP
163
46
2
anti-parallel
A
TYR
128
A
TYR
4
A
GLY
131
A
GLY
7
A
VAL
161
A
VAL
37
A
ARG
164
A
ARG
40
1
P 1