1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Calzolai, L.
Lysek, D.A.
Guntert, P.
Von Schroetter, C.
Zahn, R.
Riek, R.
Wuthrich, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
97
8340
10.1073/PNAS.97.15.8340
10900000
NMR Structures of Three Single-Residue Variants of the Human Prion Protein
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
12531.958
PRION PROTEIN
GLOBULAR DOMAIN 125-228
YES
1
man
polymer
no
no
LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVK
MMERVVEQMCITQYEKESQAYYQR
LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVK
MMERVVEQMCITQYEKESQAYYQR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
562
ESCHERICHIA COLI
repository
Initial release
Version format compliance
Version format compliance
1
0
2000-07-20
1
1
2011-05-08
1
2
2011-07-13
HUMAN PRION PROTEIN VARIANT M166V
HUMAN PRION PROTEIN VARIANT S170N
HUMAN PRION PROTEIN VARIANT S170N
HUMAN PRION PROTEIN VARIANT M166V
HUMAN PRION PROTEIN VARIANT R220K
HELIX
DETERMINATION METHOD: AUTHOR PROVIDED.
SHEET
DETERMINATION METHOD: AUTHOR PROVIDED.
PDBE
Y
PDBE
2000-05-11
REL
CHAIN A ENGINEERED MUTATION ARG220LYS
20
20
50 MM SODIUM ACETATE
4.5
pH
293
K
torsion angle dynamics
7
R.KORADI,M.BILLETER,P.GUNTERT
refinement
OPALP
structure solution
DYANA
750
Bruker
DRX
LEU
125
n
1
LEU
125
A
GLY
126
n
2
GLY
126
A
GLY
127
n
3
GLY
127
A
TYR
128
n
4
TYR
128
A
MET
129
n
5
MET
129
A
LEU
130
n
6
LEU
130
A
GLY
131
n
7
GLY
131
A
SER
132
n
8
SER
132
A
ALA
133
n
9
ALA
133
A
MET
134
n
10
MET
134
A
SER
135
n
11
SER
135
A
ARG
136
n
12
ARG
136
A
PRO
137
n
13
PRO
137
A
ILE
138
n
14
ILE
138
A
ILE
139
n
15
ILE
139
A
HIS
140
n
16
HIS
140
A
PHE
141
n
17
PHE
141
A
GLY
142
n
18
GLY
142
A
SER
143
n
19
SER
143
A
ASP
144
n
20
ASP
144
A
TYR
145
n
21
TYR
145
A
GLU
146
n
22
GLU
146
A
ASP
147
n
23
ASP
147
A
ARG
148
n
24
ARG
148
A
TYR
149
n
25
TYR
149
A
TYR
150
n
26
TYR
150
A
ARG
151
n
27
ARG
151
A
GLU
152
n
28
GLU
152
A
ASN
153
n
29
ASN
153
A
MET
154
n
30
MET
154
A
HIS
155
n
31
HIS
155
A
ARG
156
n
32
ARG
156
A
TYR
157
n
33
TYR
157
A
PRO
158
n
34
PRO
158
A
ASN
159
n
35
ASN
159
A
GLN
160
n
36
GLN
160
A
VAL
161
n
37
VAL
161
A
TYR
162
n
38
TYR
162
A
TYR
163
n
39
TYR
163
A
ARG
164
n
40
ARG
164
A
PRO
165
n
41
PRO
165
A
MET
166
n
42
MET
166
A
ASP
167
n
43
ASP
167
A
GLU
168
n
44
GLU
168
A
TYR
169
n
45
TYR
169
A
SER
170
n
46
SER
170
A
ASN
171
n
47
ASN
171
A
GLN
172
n
48
GLN
172
A
ASN
173
n
49
ASN
173
A
ASN
174
n
50
ASN
174
A
PHE
175
n
51
PHE
175
A
VAL
176
n
52
VAL
176
A
HIS
177
n
53
HIS
177
A
ASP
178
n
54
ASP
178
A
CYS
179
n
55
CYS
179
A
VAL
180
n
56
VAL
180
A
ASN
181
n
57
ASN
181
A
ILE
182
n
58
ILE
182
A
THR
183
n
59
THR
183
A
ILE
184
n
60
ILE
184
A
LYS
185
n
61
LYS
185
A
GLN
186
n
62
GLN
186
A
HIS
187
n
63
HIS
187
A
THR
188
n
64
THR
188
A
VAL
189
n
65
VAL
189
A
THR
190
n
66
THR
190
A
THR
191
n
67
THR
191
A
THR
192
n
68
THR
192
A
THR
193
n
69
THR
193
A
LYS
194
n
70
LYS
194
A
GLY
195
n
71
GLY
195
A
GLU
196
n
72
GLU
196
A
ASN
197
n
73
ASN
197
A
PHE
198
n
74
PHE
198
A
THR
199
n
75
THR
199
A
GLU
200
n
76
GLU
200
A
THR
201
n
77
THR
201
A
ASP
202
n
78
ASP
202
A
VAL
203
n
79
VAL
203
A
LYS
204
n
80
LYS
204
A
MET
205
n
81
MET
205
A
MET
206
n
82
MET
206
A
GLU
207
n
83
GLU
207
A
ARG
208
n
84
ARG
208
A
VAL
209
n
85
VAL
209
A
VAL
210
n
86
VAL
210
A
GLU
211
n
87
GLU
211
A
GLN
212
n
88
GLN
212
A
MET
213
n
89
MET
213
A
CYS
214
n
90
CYS
214
A
ILE
215
n
91
ILE
215
A
THR
216
n
92
THR
216
A
GLN
217
n
93
GLN
217
A
TYR
218
n
94
TYR
218
A
GLU
219
n
95
GLU
219
A
LYS
220
n
96
LYS
220
A
GLU
221
n
97
GLU
221
A
SER
222
n
98
SER
222
A
GLN
223
n
99
GLN
223
A
ALA
224
n
100
ALA
224
A
TYR
225
n
101
TYR
225
A
TYR
226
n
102
TYR
226
A
GLN
227
n
103
GLN
227
A
ARG
228
n
104
ARG
228
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLY
131
A
N
GLY
7
A
O
VAL
161
A
O
VAL
37
5
A
A
HH
OD2
TYR
ASP
128
178
1.51
7
A
A
HH
OD2
TYR
ASP
157
202
1.60
9
A
A
HH
OD1
TYR
ASP
149
202
1.57
9
A
A
HH
OD2
TYR
ASP
128
178
1.59
19
A
A
HG
OE1
SER
GLU
143
146
1.54
20
A
A
HH
OD1
TYR
ASP
157
202
1.55
6
A
A
MET
SER
134
135
145.96
10
A
A
TYR
GLN
226
227
-148.55
15
A
A
GLY
SER
131
132
-149.46
17
A
A
ASN
MET
153
154
-145.82
18
A
A
ASP
GLU
167
168
138.88
20
A
A
SER
ASN
170
171
139.87
1
A
ARG
208
0.095
SIDE CHAIN
2
A
ARG
148
0.112
SIDE CHAIN
2
A
TYR
149
0.072
SIDE CHAIN
2
A
TYR
150
0.071
SIDE CHAIN
2
A
ARG
156
0.109
SIDE CHAIN
2
A
TYR
226
0.103
SIDE CHAIN
3
A
ARG
136
0.085
SIDE CHAIN
3
A
ARG
148
0.111
SIDE CHAIN
3
A
TYR
149
0.066
SIDE CHAIN
3
A
TYR
226
0.074
SIDE CHAIN
5
A
TYR
128
0.124
SIDE CHAIN
6
A
ARG
136
0.087
SIDE CHAIN
6
A
ARG
148
0.081
SIDE CHAIN
6
A
ARG
208
0.091
SIDE CHAIN
8
A
ARG
164
0.126
SIDE CHAIN
9
A
TYR
128
0.096
SIDE CHAIN
9
A
ARG
136
0.120
SIDE CHAIN
9
A
TYR
145
0.061
SIDE CHAIN
9
A
TYR
226
0.105
SIDE CHAIN
9
A
ARG
228
0.079
SIDE CHAIN
10
A
ARG
228
0.130
SIDE CHAIN
11
A
TYR
145
0.081
SIDE CHAIN
11
A
ARG
148
0.081
SIDE CHAIN
12
A
ARG
136
0.080
SIDE CHAIN
12
A
ARG
156
0.076
SIDE CHAIN
12
A
TYR
162
0.068
SIDE CHAIN
12
A
ARG
228
0.077
SIDE CHAIN
13
A
ARG
228
0.084
SIDE CHAIN
14
A
ARG
208
0.100
SIDE CHAIN
15
A
ARG
151
0.094
SIDE CHAIN
16
A
TYR
145
0.075
SIDE CHAIN
16
A
TYR
149
0.079
SIDE CHAIN
16
A
TYR
150
0.073
SIDE CHAIN
17
A
ARG
148
0.081
SIDE CHAIN
18
A
TYR
128
0.067
SIDE CHAIN
18
A
TYR
145
0.072
SIDE CHAIN
18
A
TYR
163
0.079
SIDE CHAIN
19
A
TYR
150
0.099
SIDE CHAIN
20
A
TYR
149
0.078
SIDE CHAIN
20
A
ARG
156
0.148
SIDE CHAIN
2
-3.46
0.50
120.30
116.84
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
151
151
151
N
7
-3.71
0.60
121.00
117.29
A
A
A
CB
CG
CD2
TYR
TYR
TYR
157
157
157
N
8
-3.71
0.60
121.00
117.29
A
A
A
CB
CG
CD2
TYR
TYR
TYR
163
163
163
N
9
6.93
1.10
114.20
121.13
A
A
A
CA
CB
SG
CYS
CYS
CYS
179
179
179
N
15
7.51
1.10
114.20
121.71
A
A
A
CA
CB
SG
CYS
CYS
CYS
179
179
179
N
1
A
SER
135
46.65
-143.61
1
A
ASN
153
-96.16
32.45
1
A
MET
166
-57.76
108.69
1
A
GLU
168
55.87
-166.86
1
A
TYR
169
33.78
41.67
1
A
ASN
171
-152.11
-93.90
1
A
GLN
172
-89.82
-102.05
1
A
GLU
219
-67.08
24.74
1
A
LYS
220
-122.25
-92.34
1
A
TYR
226
-99.10
56.73
1
A
GLN
227
-124.44
-57.41
2
A
ILE
138
48.93
76.27
2
A
MET
166
-69.77
84.84
2
A
ASP
167
-148.87
-53.31
2
A
PHE
198
48.97
109.92
2
A
LYS
220
-132.64
-34.67
2
A
GLN
227
-132.05
-43.49
3
A
ARG
136
-36.23
106.30
3
A
ILE
138
51.75
73.28
3
A
HIS
140
-67.60
98.03
3
A
ASP
167
-150.18
69.35
3
A
GLU
168
-158.74
-50.43
3
A
TYR
169
-156.58
-36.62
3
A
SER
170
56.46
159.37
3
A
ASN
171
154.96
147.00
3
A
PHE
198
56.10
179.83
3
A
GLU
221
-69.97
-178.90
3
A
SER
222
72.68
-37.30
3
A
GLN
227
50.16
3.27
4
A
TYR
128
56.06
-175.14
4
A
ARG
136
65.71
95.36
4
A
ILE
138
60.15
102.21
4
A
MET
166
-64.01
81.79
4
A
ASP
167
-164.15
-36.52
4
A
ASN
171
82.19
100.59
4
A
PHE
198
61.07
-176.43
5
A
ILE
138
67.48
104.97
5
A
ASN
159
-147.38
-11.59
5
A
GLU
168
-129.34
-137.60
5
A
GLU
221
50.43
-3.46
6
A
ALA
133
-75.07
22.04
6
A
MET
134
37.11
-167.81
6
A
ILE
138
55.53
-86.01
6
A
ILE
139
81.20
114.53
6
A
MET
166
-80.87
45.74
6
A
GLN
172
-96.58
-101.04
6
A
GLU
219
-105.03
-66.08
6
A
TYR
226
-79.54
23.28
7
A
TYR
128
49.98
-164.09
7
A
ARG
136
60.81
76.00
7
A
HIS
140
-103.58
78.64
7
A
GLU
168
154.49
-63.65
7
A
GLU
219
-105.32
-66.65
7
A
TYR
226
-103.53
54.66
8
A
SER
135
64.45
-171.47
8
A
ILE
138
64.62
131.02
8
A
TYR
163
-169.58
-169.00
8
A
MET
166
-63.48
91.33
8
A
ASP
167
-168.06
32.27
8
A
GLU
168
-141.41
-69.55
8
A
ASN
171
86.30
103.04
8
A
LYS
220
-136.03
-58.52
9
A
LEU
130
-83.16
38.31
9
A
ARG
136
65.36
95.18
9
A
ILE
138
70.07
-56.47
9
A
ILE
139
63.83
151.99
9
A
MET
166
-56.81
105.74
9
A
ASP
167
-165.74
111.07
9
A
GLU
168
65.68
166.61
9
A
TYR
169
42.15
12.42
9
A
SER
170
-47.30
98.65
10
A
TYR
128
54.47
-168.62
10
A
SER
132
-141.49
-156.25
10
A
ILE
138
66.70
124.62
10
A
ASP
167
-157.12
-36.12
10
A
GLU
168
-121.46
-55.35
10
A
GLN
172
-81.84
-98.58
10
A
LYS
220
-119.34
-105.96
11
A
ARG
136
-56.54
107.55
11
A
MET
166
24.57
74.52
11
A
ASP
167
-57.86
-80.83
11
A
GLU
168
-160.15
-60.11
11
A
SER
170
51.08
0.90
11
A
GLU
219
-65.94
17.59
11
A
GLU
221
-127.09
-58.61
11
A
GLN
227
-102.75
43.18
12
A
TYR
128
53.56
-176.23
12
A
ARG
136
-32.97
106.86
12
A
ASP
167
-145.28
-3.13
12
A
GLU
168
-140.62
-4.83
12
A
TYR
169
-133.68
-70.53
12
A
SER
170
37.63
76.52
12
A
GLN
172
-102.00
-101.87
12
A
GLU
219
-74.69
26.07
13
A
ILE
139
59.31
-7.67
13
A
HIS
140
50.03
173.57
13
A
PHE
141
-136.16
-38.77
13
A
MET
154
-57.53
-7.29
13
A
PRO
165
-68.18
92.29
13
A
MET
166
39.23
56.07
13
A
GLU
168
-156.81
-52.79
13
A
GLN
172
-90.56
-92.72
13
A
GLU
219
-65.16
6.58
13
A
LYS
220
-131.32
-46.91
14
A
SER
132
-79.08
-106.98
14
A
ARG
136
57.39
89.62
14
A
ILE
138
65.97
122.10
14
A
MET
166
58.06
-35.79
14
A
ASP
167
50.94
-75.60
14
A
GLU
168
-161.59
-65.09
14
A
GLU
219
-66.90
6.44
14
A
LYS
220
-106.91
-84.59
15
A
SER
132
36.53
-106.72
15
A
ILE
139
54.40
177.46
15
A
ARG
156
-171.70
-30.97
15
A
MET
166
-68.41
-164.74
15
A
ASP
167
90.24
-66.73
15
A
GLN
172
-108.47
-89.23
15
A
PHE
198
-38.09
109.07
15
A
GLU
219
-76.35
43.77
16
A
ARG
136
-25.40
104.31
16
A
ILE
139
55.96
107.63
16
A
MET
154
-39.17
-35.28
16
A
GLU
168
62.06
-76.81
16
A
SER
170
50.72
8.64
16
A
GLU
219
-72.04
33.35
16
A
GLU
221
-143.96
-28.88
16
A
GLN
227
-83.18
32.62
17
A
MET
134
-160.62
55.85
17
A
SER
135
44.71
-134.21
17
A
ILE
138
54.35
89.14
17
A
MET
166
38.96
73.50
17
A
GLU
168
73.19
128.89
17
A
TYR
169
47.23
136.06
17
A
GLN
172
-87.49
-81.62
17
A
GLU
221
-142.00
27.92
17
A
SER
222
-123.49
-57.91
18
A
SER
132
-172.28
-165.64
18
A
ALA
133
-102.94
-169.85
18
A
ILE
138
64.46
-73.63
18
A
ILE
139
62.60
165.89
18
A
GLU
168
-152.31
-115.29
18
A
SER
170
54.86
163.15
18
A
GLN
172
-77.51
-93.75
18
A
LYS
220
-78.23
-73.77
19
A
MET
166
-67.97
97.63
19
A
ASP
167
-157.17
-52.17
19
A
GLN
172
-81.65
-101.44
19
A
GLU
221
35.25
-73.45
20
A
MET
134
-143.08
44.26
20
A
SER
135
54.83
-172.47
20
A
ILE
138
58.12
77.75
20
A
MET
166
-67.54
-93.09
20
A
ASP
167
50.89
14.23
20
A
GLU
168
-146.40
-85.06
20
A
SER
170
55.00
146.50
20
A
ASN
171
-170.05
-173.31
20
A
GLN
172
-86.00
-86.55
20
A
PHE
198
53.60
-173.56
20
A
GLU
221
52.62
-77.18
20
A
GLN
227
36.72
43.89
PRION PROTEIN
Human prion protein variant R220K
1
N
N
A
ASP
144
A
ASP
20
HELX_P
A
MET
154
A
MET
30
1
H1
11
A
ASN
173
A
ASN
49
HELX_P
A
LYS
194
A
LYS
70
1
H2
22
A
GLU
200
A
GLU
76
HELX_P
A
GLU
219
A
GLU
95
1
H3
20
disulf
2.028
A
CYS
179
A
SG
CYS
55
1_555
A
CYS
214
A
SG
CYS
90
1_555
PRION PROTEIN
PRION PROTEIN
P78446
UNP
1
P78446
118
221
1E1U
125
228
P78446
A
1
1
104
1
ARG
engineered mutation
LYS
220
1E1U
A
P78446
UNP
213
96
2
anti-parallel
A
TYR
128
A
TYR
4
A
GLY
131
A
GLY
7
A
VAL
161
A
VAL
37
A
ARG
164
A
ARG
40
1
P 1