0.007041 0.004065 0.000000 0.000000 0.008130 0.000000 0.000000 0.000000 0.005701 0.00000 0.00000 0.00000 Desogus, G. Todone, F. Brick, P. Onesti, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 142.020 142.020 175.390 C11 H18 N5 O12 P3 505.208 PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 S P N 6 N O N 7 N O N 8 N C N 9 R P N 10 N O N 11 N O N 12 N O N 13 N O N 14 N C N 15 R C N 16 N O N 17 S C N 18 N O N 19 R C N 20 N O N 21 R C Y 22 N N Y 23 N C Y 24 N N Y 25 N C Y 26 N C N 27 N N Y 28 N N Y 29 N C Y 30 N N Y 31 N C N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N N N 51 S C N 52 N C N 53 N O N 54 N C N 55 N O N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N N N 64 S C N 65 N C N 66 N O N 67 N C N 68 N C N 69 N C N 70 N N N 71 N C N 72 N N N 73 N N N 74 N O N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N N N 91 S C N 92 N C N 93 N O N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 S C N 109 N C N 110 N O N 111 N C N 112 N C N 113 N O N 114 N O N 115 N O N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 R C N 125 N C N 126 N O N 127 N C N 128 N S N 129 N O N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C N 142 N C N 143 N C N 144 N O N 145 N N N 146 N O N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N N N 158 S C N 159 N C N 160 N O N 161 N C N 162 N C N 163 N C N 164 N O N 165 N O N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N N N 177 N C N 178 N C N 179 N O N 180 N O N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N C N 187 N O N 188 N C N 189 N O N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N N N 201 S C N 202 N C N 203 N O N 204 N C Y 205 N C Y 206 N N Y 207 N C Y 208 N C Y 209 N N N 210 N O N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N O N 222 N H N 223 N H N 224 N N N 225 S C N 226 N C N 227 N O N 228 S C N 229 N C N 230 N C N 231 N C N 232 N O N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N N N 247 S C N 248 N C N 249 N O N 250 N C N 251 N C N 252 N C N 253 N C N 254 N O N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 N C N 273 N C N 274 N C N 275 N C N 276 N N N 277 N O N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N N N 294 S C N 295 N C N 296 N O N 297 N C N 298 N C N 299 N S N 300 N C N 301 N O N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N MG N 314 N N N 315 S C N 316 N C N 317 N O N 318 N C Y 319 N C Y 320 N C Y 321 N C Y 322 N C Y 323 N C Y 324 N C N 325 N O N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 N C N 342 N C N 343 N C N 344 N O N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N N N 355 S C N 356 N C N 357 N O N 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N N N 369 S C N 370 N C N 371 N O N 372 R C N 373 N O N 374 N C N 375 N O N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N N N 386 S C N 387 N C N 388 N O N 389 N C Y 390 N C Y 391 N C Y 392 N C Y 393 N N Y 394 N C Y 395 N C Y 396 N C Y 397 N C Y 398 N C N 399 N O N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N N N 413 S C N 414 N C N 415 N O N 416 N C Y 417 N C Y 418 N C Y 419 N C Y 420 N C Y 421 N C Y 422 N C N 423 N O N 424 N O N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N N N 437 S C N 438 N C N 439 N O N 440 N C N 441 N C N 442 N C N 443 N O N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N doub N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing Y 37 N sing Y 38 N sing Y 39 N doub N 40 N sing Y 41 N sing Y 42 N sing Y 43 N doub N 44 N sing Y 45 N doub N 46 N sing N 47 N sing Y 48 N sing Y 49 N doub N 50 N sing Y 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N doub N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N doub N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N doub N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing Y 204 N sing Y 205 N doub Y 206 N doub N 207 N sing Y 208 N sing N 209 N sing Y 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N doub N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing Y 312 N doub Y 313 N sing Y 314 N sing N 315 N sing Y 316 N doub N 317 N sing Y 318 N doub N 319 N sing Y 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N doub N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N doub N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N doub N 377 N sing N 378 N sing N 379 N sing N 380 N sing Y 381 N doub Y 382 N sing Y 383 N sing N 384 N sing Y 385 N doub Y 386 N sing Y 387 N sing N 388 N sing Y 389 N sing Y 390 N doub N 391 N sing Y 392 N doub N 393 N sing Y 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N doub N 405 N sing N 406 N sing N 407 N sing N 408 N sing Y 409 N doub Y 410 N sing Y 411 N sing N 412 N sing Y 413 N doub N 414 N sing Y 415 N doub N 416 N sing Y 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N doub N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing US Biochemistry BICHAW 0033 0006-2960 39 8418 10.1021/BI0006722 10913247 Active Site of Lysyl-tRNA Synthetase: Structural Studies of the Adenylation Reaction 2000 10.2210/pdb1e22/pdb pdb_00001e22 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 MIRROR IMAGE PLATE 1995-06-15 MARRESEARCH SI(111) SINGLE WAVELENGTH M x-ray 1 1.32 1.0 5.2R ELETTRA 1.32 SYNCHROTRON ELETTRA BEAMLINE 5.2R 57767.191 LYSYL-TRNA SYNTHETASE 6.1.1.6 1 man polymer 147.195 LYSINE 1 syn non-polymer 505.208 PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER 1 syn non-polymer 24.305 MAGNESIUM ION 3 syn non-polymer 92.094 GLYCEROL 6 syn non-polymer 18.015 water 306 nat water no no SEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMG KASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQ DQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPE LYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFG KPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLA RRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDR MIMLFTNSHTIRDVILFPAMRPQK SEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMG KASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQ DQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPE LYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFG KPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLA RRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDR MIMLFTNSHTIRDVILFPAMRPQK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n K-12 sample CYTOPLASM LYSU 83333 ESCHERICHIA COLI LYSU 562 ESCHERICHIA COLI TG2 PXLYS5 1 4.8 74 STRUCTURE WAS SOLVED BY DIFFERENCE FOURIER METHODS USING PHASES FROM 1E1O 6.80 THE PROTEIN WAS CONCENTRATED TO 12 MG/ML IN THE PRESENCE OF 5 MM LYSINE AND WAS CRYSTALLISED FROM 0.1 M PIPES PH 6.8, 0.5 M LICL, 20% PEG 4K, 17% GLYCEROL; THEN, A SMALL AMOUNT OF A SOLUTION CONTAINING AMP-PCP AND MGCL2 WAS ADDED TO THE DROP TO GET A FINAL CONCENTRATION OF ABOUT 5 MM. chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Atomic model Derived calculations Non-polymer description Other Refinement description Source and taxonomy Version format compliance Data collection Database references Derived calculations Other Refinement description 1 0 2000-07-28 1 1 2011-08-24 1 2 2023-12-06 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id LYSYL-TRNA SYNTHETASE (LYSU) (E.C.6.1.1.6) COMPLEXED WITH LYSINE LYSYL-TRNA SYNTHETASE (LYSU) HEXAGONAL FORM, COMPLEXED WITH LYSINE LYSYL-TRNA SYNTHETASE (LYSU) HEXAGONAL FORM COMPLEXED WITH THE LYSYL_ADENYLATE INTERMEDIATE LYSYL-TRNA SYNTHETASE (LYSU) HEXAGONAL FORM COMPLEXED WITH LYSINE AND ATP AND MN2+ PDBE Y PDBE 2000-05-15 REL REL LYS LYSINE ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER MG MAGNESIUM ION GOL GLYCEROL HOH water WHEN THE NON-HYDROLYSABLE ATP ANALOGUE AMP-PCP IS USED INSTEAD OF ATP THE FIRST STEP OF THE REACTION DOES NOT OCCUR AND THE RESULTING MODEL SHOWS THE CONFORMATION OF THE ATP SUBSTRATE BEFORE THE REACTION. 1E1O PDB experimental model LYS 510 2 LYS LYS 510 A ACP 512 3 ACP ACP 512 A MG 515 4 MG MG 515 A MG 516 4 MG MG 516 A MG 517 4 MG MG 517 A GOL 520 5 GOL GOL 520 A GOL 521 5 GOL GOL 521 A GOL 522 5 GOL GOL 522 A GOL 523 5 GOL GOL 523 A GOL 524 5 GOL GOL 524 A GOL 525 5 GOL GOL 525 A HOH 2001 6 HOH HOH 2001 A HOH 2002 6 HOH HOH 2002 A HOH 2003 6 HOH HOH 2003 A HOH 2004 6 HOH HOH 2004 A HOH 2005 6 HOH HOH 2005 A HOH 2006 6 HOH HOH 2006 A HOH 2007 6 HOH HOH 2007 A HOH 2008 6 HOH HOH 2008 A HOH 2009 6 HOH HOH 2009 A HOH 2010 6 HOH HOH 2010 A HOH 2011 6 HOH HOH 2011 A HOH 2012 6 HOH HOH 2012 A HOH 2013 6 HOH HOH 2013 A HOH 2014 6 HOH HOH 2014 A HOH 2015 6 HOH HOH 2015 A HOH 2016 6 HOH HOH 2016 A HOH 2017 6 HOH HOH 2017 A HOH 2018 6 HOH HOH 2018 A HOH 2019 6 HOH HOH 2019 A HOH 2020 6 HOH HOH 2020 A HOH 2021 6 HOH HOH 2021 A HOH 2022 6 HOH HOH 2022 A HOH 2023 6 HOH HOH 2023 A HOH 2024 6 HOH HOH 2024 A HOH 2025 6 HOH HOH 2025 A HOH 2026 6 HOH HOH 2026 A HOH 2027 6 HOH HOH 2027 A HOH 2028 6 HOH HOH 2028 A HOH 2029 6 HOH HOH 2029 A HOH 2030 6 HOH HOH 2030 A HOH 2031 6 HOH HOH 2031 A HOH 2032 6 HOH HOH 2032 A HOH 2033 6 HOH HOH 2033 A HOH 2034 6 HOH HOH 2034 A HOH 2035 6 HOH HOH 2035 A HOH 2036 6 HOH HOH 2036 A HOH 2037 6 HOH HOH 2037 A HOH 2038 6 HOH HOH 2038 A HOH 2039 6 HOH HOH 2039 A HOH 2040 6 HOH HOH 2040 A HOH 2041 6 HOH HOH 2041 A HOH 2042 6 HOH HOH 2042 A HOH 2043 6 HOH HOH 2043 A HOH 2044 6 HOH HOH 2044 A HOH 2045 6 HOH HOH 2045 A HOH 2046 6 HOH HOH 2046 A HOH 2047 6 HOH HOH 2047 A HOH 2048 6 HOH HOH 2048 A HOH 2049 6 HOH HOH 2049 A HOH 2050 6 HOH HOH 2050 A HOH 2051 6 HOH HOH 2051 A HOH 2052 6 HOH HOH 2052 A HOH 2053 6 HOH HOH 2053 A HOH 2054 6 HOH HOH 2054 A HOH 2055 6 HOH HOH 2055 A HOH 2056 6 HOH HOH 2056 A HOH 2057 6 HOH HOH 2057 A HOH 2058 6 HOH HOH 2058 A HOH 2059 6 HOH HOH 2059 A HOH 2060 6 HOH HOH 2060 A HOH 2061 6 HOH HOH 2061 A HOH 2062 6 HOH HOH 2062 A HOH 2063 6 HOH HOH 2063 A HOH 2064 6 HOH HOH 2064 A HOH 2065 6 HOH HOH 2065 A HOH 2066 6 HOH HOH 2066 A HOH 2067 6 HOH HOH 2067 A HOH 2068 6 HOH HOH 2068 A HOH 2069 6 HOH HOH 2069 A HOH 2070 6 HOH HOH 2070 A HOH 2071 6 HOH HOH 2071 A HOH 2072 6 HOH HOH 2072 A HOH 2073 6 HOH HOH 2073 A HOH 2074 6 HOH HOH 2074 A HOH 2075 6 HOH HOH 2075 A HOH 2076 6 HOH HOH 2076 A HOH 2077 6 HOH HOH 2077 A HOH 2078 6 HOH HOH 2078 A HOH 2079 6 HOH HOH 2079 A HOH 2080 6 HOH HOH 2080 A HOH 2081 6 HOH HOH 2081 A HOH 2082 6 HOH HOH 2082 A HOH 2083 6 HOH HOH 2083 A HOH 2084 6 HOH HOH 2084 A HOH 2085 6 HOH HOH 2085 A HOH 2086 6 HOH HOH 2086 A HOH 2087 6 HOH HOH 2087 A HOH 2088 6 HOH HOH 2088 A HOH 2089 6 HOH HOH 2089 A HOH 2090 6 HOH HOH 2090 A HOH 2091 6 HOH HOH 2091 A HOH 2092 6 HOH HOH 2092 A HOH 2093 6 HOH HOH 2093 A HOH 2094 6 HOH HOH 2094 A HOH 2095 6 HOH HOH 2095 A HOH 2096 6 HOH HOH 2096 A HOH 2097 6 HOH HOH 2097 A HOH 2098 6 HOH HOH 2098 A HOH 2099 6 HOH HOH 2099 A HOH 2100 6 HOH HOH 2100 A HOH 2101 6 HOH HOH 2101 A HOH 2102 6 HOH HOH 2102 A HOH 2103 6 HOH HOH 2103 A HOH 2104 6 HOH HOH 2104 A HOH 2105 6 HOH HOH 2105 A HOH 2106 6 HOH HOH 2106 A HOH 2107 6 HOH HOH 2107 A HOH 2108 6 HOH HOH 2108 A HOH 2109 6 HOH HOH 2109 A HOH 2110 6 HOH HOH 2110 A HOH 2111 6 HOH HOH 2111 A HOH 2112 6 HOH HOH 2112 A HOH 2113 6 HOH HOH 2113 A HOH 2114 6 HOH HOH 2114 A HOH 2115 6 HOH HOH 2115 A HOH 2116 6 HOH HOH 2116 A HOH 2117 6 HOH HOH 2117 A HOH 2118 6 HOH HOH 2118 A HOH 2119 6 HOH HOH 2119 A HOH 2120 6 HOH HOH 2120 A HOH 2121 6 HOH HOH 2121 A HOH 2122 6 HOH HOH 2122 A HOH 2123 6 HOH HOH 2123 A HOH 2124 6 HOH HOH 2124 A HOH 2125 6 HOH HOH 2125 A HOH 2126 6 HOH HOH 2126 A HOH 2127 6 HOH HOH 2127 A HOH 2128 6 HOH HOH 2128 A HOH 2129 6 HOH HOH 2129 A HOH 2130 6 HOH HOH 2130 A HOH 2131 6 HOH HOH 2131 A HOH 2132 6 HOH HOH 2132 A HOH 2133 6 HOH HOH 2133 A HOH 2134 6 HOH HOH 2134 A HOH 2135 6 HOH HOH 2135 A HOH 2136 6 HOH HOH 2136 A HOH 2137 6 HOH HOH 2137 A HOH 2138 6 HOH HOH 2138 A HOH 2139 6 HOH HOH 2139 A HOH 2140 6 HOH HOH 2140 A HOH 2141 6 HOH HOH 2141 A HOH 2142 6 HOH HOH 2142 A HOH 2143 6 HOH HOH 2143 A HOH 2144 6 HOH HOH 2144 A HOH 2145 6 HOH HOH 2145 A HOH 2146 6 HOH HOH 2146 A HOH 2147 6 HOH HOH 2147 A HOH 2148 6 HOH HOH 2148 A HOH 2149 6 HOH HOH 2149 A HOH 2150 6 HOH HOH 2150 A HOH 2151 6 HOH HOH 2151 A HOH 2152 6 HOH HOH 2152 A HOH 2153 6 HOH HOH 2153 A HOH 2154 6 HOH HOH 2154 A HOH 2155 6 HOH HOH 2155 A HOH 2156 6 HOH HOH 2156 A HOH 2157 6 HOH HOH 2157 A HOH 2158 6 HOH HOH 2158 A HOH 2159 6 HOH HOH 2159 A HOH 2160 6 HOH HOH 2160 A HOH 2161 6 HOH HOH 2161 A HOH 2162 6 HOH HOH 2162 A HOH 2163 6 HOH HOH 2163 A HOH 2164 6 HOH HOH 2164 A HOH 2165 6 HOH HOH 2165 A HOH 2166 6 HOH HOH 2166 A HOH 2167 6 HOH HOH 2167 A HOH 2168 6 HOH HOH 2168 A HOH 2169 6 HOH HOH 2169 A HOH 2170 6 HOH HOH 2170 A HOH 2171 6 HOH HOH 2171 A HOH 2172 6 HOH HOH 2172 A HOH 2173 6 HOH HOH 2173 A HOH 2174 6 HOH HOH 2174 A HOH 2175 6 HOH HOH 2175 A HOH 2176 6 HOH HOH 2176 A HOH 2177 6 HOH HOH 2177 A HOH 2178 6 HOH HOH 2178 A HOH 2179 6 HOH HOH 2179 A HOH 2180 6 HOH HOH 2180 A HOH 2181 6 HOH HOH 2181 A HOH 2182 6 HOH HOH 2182 A HOH 2183 6 HOH HOH 2183 A HOH 2184 6 HOH HOH 2184 A HOH 2185 6 HOH HOH 2185 A HOH 2186 6 HOH HOH 2186 A HOH 2187 6 HOH HOH 2187 A HOH 2188 6 HOH HOH 2188 A HOH 2189 6 HOH HOH 2189 A HOH 2190 6 HOH HOH 2190 A HOH 2191 6 HOH HOH 2191 A HOH 2192 6 HOH HOH 2192 A HOH 2193 6 HOH HOH 2193 A HOH 2194 6 HOH HOH 2194 A HOH 2195 6 HOH HOH 2195 A HOH 2196 6 HOH HOH 2196 A HOH 2197 6 HOH HOH 2197 A HOH 2198 6 HOH HOH 2198 A HOH 2199 6 HOH HOH 2199 A HOH 2200 6 HOH HOH 2200 A HOH 2201 6 HOH HOH 2201 A HOH 2202 6 HOH HOH 2202 A HOH 2203 6 HOH HOH 2203 A HOH 2204 6 HOH HOH 2204 A HOH 2205 6 HOH HOH 2205 A HOH 2206 6 HOH HOH 2206 A HOH 2207 6 HOH HOH 2207 A HOH 2208 6 HOH HOH 2208 A HOH 2209 6 HOH HOH 2209 A HOH 2210 6 HOH HOH 2210 A HOH 2211 6 HOH HOH 2211 A HOH 2212 6 HOH HOH 2212 A HOH 2213 6 HOH HOH 2213 A HOH 2214 6 HOH HOH 2214 A HOH 2215 6 HOH HOH 2215 A HOH 2216 6 HOH HOH 2216 A HOH 2217 6 HOH HOH 2217 A HOH 2218 6 HOH HOH 2218 A HOH 2219 6 HOH HOH 2219 A HOH 2220 6 HOH HOH 2220 A HOH 2221 6 HOH HOH 2221 A HOH 2222 6 HOH HOH 2222 A HOH 2223 6 HOH HOH 2223 A HOH 2224 6 HOH HOH 2224 A HOH 2225 6 HOH HOH 2225 A HOH 2226 6 HOH HOH 2226 A HOH 2227 6 HOH HOH 2227 A HOH 2228 6 HOH HOH 2228 A HOH 2229 6 HOH HOH 2229 A HOH 2230 6 HOH HOH 2230 A HOH 2231 6 HOH HOH 2231 A HOH 2232 6 HOH HOH 2232 A HOH 2233 6 HOH HOH 2233 A HOH 2234 6 HOH HOH 2234 A HOH 2235 6 HOH HOH 2235 A HOH 2236 6 HOH HOH 2236 A HOH 2237 6 HOH HOH 2237 A HOH 2238 6 HOH HOH 2238 A HOH 2239 6 HOH HOH 2239 A HOH 2240 6 HOH HOH 2240 A HOH 2241 6 HOH HOH 2241 A HOH 2242 6 HOH HOH 2242 A HOH 2243 6 HOH HOH 2243 A HOH 2244 6 HOH HOH 2244 A HOH 2245 6 HOH HOH 2245 A HOH 2246 6 HOH HOH 2246 A HOH 2247 6 HOH HOH 2247 A HOH 2248 6 HOH HOH 2248 A HOH 2249 6 HOH HOH 2249 A HOH 2250 6 HOH HOH 2250 A HOH 2251 6 HOH HOH 2251 A HOH 2252 6 HOH HOH 2252 A HOH 2253 6 HOH HOH 2253 A HOH 2254 6 HOH HOH 2254 A HOH 2255 6 HOH HOH 2255 A HOH 2256 6 HOH HOH 2256 A HOH 2257 6 HOH HOH 2257 A HOH 2258 6 HOH HOH 2258 A HOH 2259 6 HOH HOH 2259 A HOH 2260 6 HOH HOH 2260 A HOH 2261 6 HOH HOH 2261 A HOH 2262 6 HOH HOH 2262 A HOH 2263 6 HOH HOH 2263 A HOH 2264 6 HOH HOH 2264 A HOH 2265 6 HOH HOH 2265 A HOH 2266 6 HOH HOH 2266 A HOH 2267 6 HOH HOH 2267 A HOH 2268 6 HOH HOH 2268 A HOH 2269 6 HOH HOH 2269 A HOH 2270 6 HOH HOH 2270 A HOH 2271 6 HOH HOH 2271 A HOH 2272 6 HOH HOH 2272 A HOH 2273 6 HOH HOH 2273 A HOH 2274 6 HOH HOH 2274 A HOH 2275 6 HOH HOH 2275 A HOH 2276 6 HOH HOH 2276 A HOH 2277 6 HOH HOH 2277 A HOH 2278 6 HOH HOH 2278 A HOH 2279 6 HOH HOH 2279 A HOH 2280 6 HOH HOH 2280 A HOH 2281 6 HOH HOH 2281 A HOH 2282 6 HOH HOH 2282 A HOH 2283 6 HOH HOH 2283 A HOH 2284 6 HOH HOH 2284 A HOH 2285 6 HOH HOH 2285 A HOH 2286 6 HOH HOH 2286 A HOH 2287 6 HOH HOH 2287 A HOH 2288 6 HOH HOH 2288 A HOH 2289 6 HOH HOH 2289 A HOH 2290 6 HOH HOH 2290 A HOH 2291 6 HOH HOH 2291 A HOH 2292 6 HOH HOH 2292 A HOH 2293 6 HOH HOH 2293 A HOH 2294 6 HOH HOH 2294 A HOH 2295 6 HOH HOH 2295 A HOH 2296 6 HOH HOH 2296 A HOH 2297 6 HOH HOH 2297 A HOH 2298 6 HOH HOH 2298 A HOH 2299 6 HOH HOH 2299 A HOH 2300 6 HOH HOH 2300 A HOH 2301 6 HOH HOH 2301 A HOH 2302 6 HOH HOH 2302 A HOH 2303 6 HOH HOH 2303 A HOH 2304 6 HOH HOH 2304 A HOH 2305 6 HOH HOH 2305 A HOH 2306 6 HOH HOH 2306 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A ALA 11 n 11 ALA 11 A ILE 12 n 12 ILE 12 A ASP 13 n 13 ASP 13 A PHE 14 n 14 PHE 14 A ASN 15 n 15 ASN 15 A ASP 16 n 16 ASP 16 A GLU 17 n 17 GLU 17 A LEU 18 n 18 LEU 18 A ARG 19 n 19 ARG 19 A ASN 20 n 20 ASN 20 A ARG 21 n 21 ARG 21 A ARG 22 n 22 ARG 22 A GLU 23 n 23 GLU 23 A LYS 24 n 24 LYS 24 A LEU 25 n 25 LEU 25 A ALA 26 n 26 ALA 26 A ALA 27 n 27 ALA 27 A LEU 28 n 28 LEU 28 A ARG 29 n 29 ARG 29 A GLN 30 n 30 GLN 30 A GLN 31 n 31 GLN 31 A GLY 32 n 32 GLY 32 A VAL 33 n 33 VAL 33 A ALA 34 n 34 ALA 34 A PHE 35 n 35 PHE 35 A PRO 36 n 36 PRO 36 A ASN 37 n 37 ASN 37 A ASP 38 n 38 ASP 38 A PHE 39 n 39 PHE 39 A ARG 40 n 40 ARG 40 A ARG 41 n 41 ARG 41 A ASP 42 n 42 ASP 42 A HIS 43 n 43 HIS 43 A THR 44 n 44 THR 44 A SER 45 n 45 SER 45 A ASP 46 n 46 ASP 46 A GLN 47 n 47 GLN 47 A LEU 48 n 48 LEU 48 A HIS 49 n 49 HIS 49 A GLU 50 n 50 GLU 50 A GLU 51 n 51 GLU 51 A PHE 52 n 52 PHE 52 A ASP 53 n 53 ASP 53 A ALA 54 n 54 ALA 54 A LYS 55 n 55 LYS 55 A ASP 56 n 56 ASP 56 A ASN 57 n 57 ASN 57 A GLN 58 n 58 GLN 58 A GLU 59 n 59 GLU 59 A LEU 60 n 60 LEU 60 A GLU 61 n 61 GLU 61 A SER 62 n 62 SER 62 A LEU 63 n 63 LEU 63 A ASN 64 n 64 ASN 64 A ILE 65 n 65 ILE 65 A GLU 66 n 66 GLU 66 A VAL 67 n 67 VAL 67 A SER 68 n 68 SER 68 A VAL 69 n 69 VAL 69 A ALA 70 n 70 ALA 70 A GLY 71 n 71 GLY 71 A ARG 72 n 72 ARG 72 A MET 73 n 73 MET 73 A MET 74 n 74 MET 74 A THR 75 n 75 THR 75 A ARG 76 n 76 ARG 76 A ARG 77 n 77 ARG 77 A ILE 78 n 78 ILE 78 A MET 79 n 79 MET 79 A GLY 80 n 80 GLY 80 A LYS 81 n 81 LYS 81 A ALA 82 n 82 ALA 82 A SER 83 n 83 SER 83 A PHE 84 n 84 PHE 84 A VAL 85 n 85 VAL 85 A THR 86 n 86 THR 86 A LEU 87 n 87 LEU 87 A GLN 88 n 88 GLN 88 A ASP 89 n 89 ASP 89 A VAL 90 n 90 VAL 90 A GLY 91 n 91 GLY 91 A GLY 92 n 92 GLY 92 A ARG 93 n 93 ARG 93 A ILE 94 n 94 ILE 94 A GLN 95 n 95 GLN 95 A LEU 96 n 96 LEU 96 A TYR 97 n 97 TYR 97 A VAL 98 n 98 VAL 98 A ALA 99 n 99 ALA 99 A ARG 100 n 100 ARG 100 A ASP 101 n 101 ASP 101 A SER 102 n 102 SER 102 A LEU 103 n 103 LEU 103 A PRO 104 n 104 PRO 104 A GLU 105 n 105 GLU 105 A GLY 106 n 106 GLY 106 A VAL 107 n 107 VAL 107 A TYR 108 n 108 TYR 108 A ASN 109 n 109 ASN 109 A ASP 110 n 110 ASP 110 A GLN 111 n 111 GLN 111 A PHE 112 n 112 PHE 112 A LYS 113 n 113 LYS 113 A LYS 114 n 114 LYS 114 A TRP 115 n 115 TRP 115 A ASP 116 n 116 ASP 116 A LEU 117 n 117 LEU 117 A GLY 118 n 118 GLY 118 A ASP 119 n 119 ASP 119 A ILE 120 n 120 ILE 120 A ILE 121 n 121 ILE 121 A GLY 122 n 122 GLY 122 A ALA 123 n 123 ALA 123 A ARG 124 n 124 ARG 124 A GLY 125 n 125 GLY 125 A THR 126 n 126 THR 126 A LEU 127 n 127 LEU 127 A PHE 128 n 128 PHE 128 A LYS 129 n 129 LYS 129 A THR 130 n 130 THR 130 A GLN 131 n 131 GLN 131 A THR 132 n 132 THR 132 A GLY 133 n 133 GLY 133 A GLU 134 n 134 GLU 134 A LEU 135 n 135 LEU 135 A SER 136 n 136 SER 136 A ILE 137 n 137 ILE 137 A HIS 138 n 138 HIS 138 A CYS 139 n 139 CYS 139 A THR 140 n 140 THR 140 A GLU 141 n 141 GLU 141 A LEU 142 n 142 LEU 142 A ARG 143 n 143 ARG 143 A LEU 144 n 144 LEU 144 A LEU 145 n 145 LEU 145 A THR 146 n 146 THR 146 A LYS 147 n 147 LYS 147 A ALA 148 n 148 ALA 148 A LEU 149 n 149 LEU 149 A ARG 150 n 150 ARG 150 A PRO 151 n 151 PRO 151 A LEU 152 n 152 LEU 152 A PRO 153 n 153 PRO 153 A n 154 154 A n 155 155 A n 156 156 A n 157 157 A n 158 158 A n 159 159 A n 160 160 A ASP 161 n 161 ASP 161 A GLN 162 n 162 GLN 162 A GLU 163 n 163 GLU 163 A VAL 164 n 164 VAL 164 A ARG 165 n 165 ARG 165 A TYR 166 n 166 TYR 166 A ARG 167 n 167 ARG 167 A GLN 168 n 168 GLN 168 A ARG 169 n 169 ARG 169 A TYR 170 n 170 TYR 170 A LEU 171 n 171 LEU 171 A ASP 172 n 172 ASP 172 A LEU 173 n 173 LEU 173 A ILE 174 n 174 ILE 174 A ALA 175 n 175 ALA 175 A ASN 176 n 176 ASN 176 A ASP 177 n 177 ASP 177 A LYS 178 n 178 LYS 178 A SER 179 n 179 SER 179 A ARG 180 n 180 ARG 180 A GLN 181 n 181 GLN 181 A THR 182 n 182 THR 182 A PHE 183 n 183 PHE 183 A VAL 184 n 184 VAL 184 A VAL 185 n 185 VAL 185 A ARG 186 n 186 ARG 186 A SER 187 n 187 SER 187 A LYS 188 n 188 LYS 188 A ILE 189 n 189 ILE 189 A LEU 190 n 190 LEU 190 A ALA 191 n 191 ALA 191 A ALA 192 n 192 ALA 192 A ILE 193 n 193 ILE 193 A ARG 194 n 194 ARG 194 A GLN 195 n 195 GLN 195 A PHE 196 n 196 PHE 196 A MET 197 n 197 MET 197 A VAL 198 n 198 VAL 198 A ALA 199 n 199 ALA 199 A ARG 200 n 200 ARG 200 A GLY 201 n 201 GLY 201 A PHE 202 n 202 PHE 202 A MET 203 n 203 MET 203 A GLU 204 n 204 GLU 204 A VAL 205 n 205 VAL 205 A GLU 206 n 206 GLU 206 A THR 207 n 207 THR 207 A PRO 208 n 208 PRO 208 A MET 209 n 209 MET 209 A MET 210 n 210 MET 210 A GLN 211 n 211 GLN 211 A VAL 212 n 212 VAL 212 A ILE 213 n 213 ILE 213 A PRO 214 n 214 PRO 214 A GLY 215 n 215 GLY 215 A GLY 216 n 216 GLY 216 A ALA 217 n 217 ALA 217 A SER 218 n 218 SER 218 A ALA 219 n 219 ALA 219 A ARG 220 n 220 ARG 220 A PRO 221 n 221 PRO 221 A PHE 222 n 222 PHE 222 A ILE 223 n 223 ILE 223 A THR 224 n 224 THR 224 A HIS 225 n 225 HIS 225 A HIS 226 n 226 HIS 226 A ASN 227 n 227 ASN 227 A ALA 228 n 228 ALA 228 A LEU 229 n 229 LEU 229 A ASP 230 n 230 ASP 230 A LEU 231 n 231 LEU 231 A ASP 232 n 232 ASP 232 A MET 233 n 233 MET 233 A TYR 234 n 234 TYR 234 A LEU 235 n 235 LEU 235 A ARG 236 n 236 ARG 236 A ILE 237 n 237 ILE 237 A ALA 238 n 238 ALA 238 A PRO 239 n 239 PRO 239 A GLU 240 n 240 GLU 240 A LEU 241 n 241 LEU 241 A TYR 242 n 242 TYR 242 A LEU 243 n 243 LEU 243 A LYS 244 n 244 LYS 244 A ARG 245 n 245 ARG 245 A LEU 246 n 246 LEU 246 A VAL 247 n 247 VAL 247 A VAL 248 n 248 VAL 248 A GLY 249 n 249 GLY 249 A GLY 250 n 250 GLY 250 A PHE 251 n 251 PHE 251 A GLU 252 n 252 GLU 252 A ARG 253 n 253 ARG 253 A VAL 254 n 254 VAL 254 A PHE 255 n 255 PHE 255 A GLU 256 n 256 GLU 256 A ILE 257 n 257 ILE 257 A ASN 258 n 258 ASN 258 A ARG 259 n 259 ARG 259 A ASN 260 n 260 ASN 260 A PHE 261 n 261 PHE 261 A ARG 262 n 262 ARG 262 A ASN 263 n 263 ASN 263 A GLU 264 n 264 GLU 264 A GLY 265 n 265 GLY 265 A ILE 266 n 266 ILE 266 A SER 267 n 267 SER 267 A VAL 268 n 268 VAL 268 A ARG 269 n 269 ARG 269 A HIS 270 n 270 HIS 270 A ASN 271 n 271 ASN 271 A PRO 272 n 272 PRO 272 A GLU 273 n 273 GLU 273 A PHE 274 n 274 PHE 274 A THR 275 n 275 THR 275 A MET 276 n 276 MET 276 A MET 277 n 277 MET 277 A GLU 278 n 278 GLU 278 A LEU 279 n 279 LEU 279 A TYR 280 n 280 TYR 280 A MET 281 n 281 MET 281 A ALA 282 n 282 ALA 282 A TYR 283 n 283 TYR 283 A ALA 284 n 284 ALA 284 A ASP 285 n 285 ASP 285 A TYR 286 n 286 TYR 286 A HIS 287 n 287 HIS 287 A ASP 288 n 288 ASP 288 A LEU 289 n 289 LEU 289 A ILE 290 n 290 ILE 290 A GLU 291 n 291 GLU 291 A LEU 292 n 292 LEU 292 A THR 293 n 293 THR 293 A GLU 294 n 294 GLU 294 A SER 295 n 295 SER 295 A LEU 296 n 296 LEU 296 A PHE 297 n 297 PHE 297 A ARG 298 n 298 ARG 298 A THR 299 n 299 THR 299 A LEU 300 n 300 LEU 300 A ALA 301 n 301 ALA 301 A GLN 302 n 302 GLN 302 A GLU 303 n 303 GLU 303 A VAL 304 n 304 VAL 304 A LEU 305 n 305 LEU 305 A GLY 306 n 306 GLY 306 A THR 307 n 307 THR 307 A THR 308 n 308 THR 308 A LYS 309 n 309 LYS 309 A VAL 310 n 310 VAL 310 A THR 311 n 311 THR 311 A TYR 312 n 312 TYR 312 A GLY 313 n 313 GLY 313 A GLU 314 n 314 GLU 314 A HIS 315 n 315 HIS 315 A VAL 316 n 316 VAL 316 A PHE 317 n 317 PHE 317 A ASP 318 n 318 ASP 318 A PHE 319 n 319 PHE 319 A GLY 320 n 320 GLY 320 A LYS 321 n 321 LYS 321 A PRO 322 n 322 PRO 322 A PHE 323 n 323 PHE 323 A GLU 324 n 324 GLU 324 A LYS 325 n 325 LYS 325 A LEU 326 n 326 LEU 326 A THR 327 n 327 THR 327 A MET 328 n 328 MET 328 A ARG 329 n 329 ARG 329 A GLU 330 n 330 GLU 330 A ALA 331 n 331 ALA 331 A ILE 332 n 332 ILE 332 A LYS 333 n 333 LYS 333 A LYS 334 n 334 LYS 334 A TYR 335 n 335 TYR 335 A ARG 336 n 336 ARG 336 A PRO 337 n 337 PRO 337 A GLU 338 n 338 GLU 338 A THR 339 n 339 THR 339 A ASP 340 n 340 ASP 340 A MET 341 n 341 MET 341 A ALA 342 n 342 ALA 342 A ASP 343 n 343 ASP 343 A LEU 344 n 344 LEU 344 A ASP 345 n 345 ASP 345 A ASN 346 n 346 ASN 346 A PHE 347 n 347 PHE 347 A ASP 348 n 348 ASP 348 A ALA 349 n 349 ALA 349 A ALA 350 n 350 ALA 350 A LYS 351 n 351 LYS 351 A ALA 352 n 352 ALA 352 A LEU 353 n 353 LEU 353 A ALA 354 n 354 ALA 354 A GLU 355 n 355 GLU 355 A SER 356 n 356 SER 356 A ILE 357 n 357 ILE 357 A GLY 358 n 358 GLY 358 A ILE 359 n 359 ILE 359 A THR 360 n 360 THR 360 A VAL 361 n 361 VAL 361 A GLU 362 n 362 GLU 362 A LYS 363 n 363 LYS 363 A SER 364 n 364 SER 364 A TRP 365 n 365 TRP 365 A GLY 366 n 366 GLY 366 A LEU 367 n 367 LEU 367 A GLY 368 n 368 GLY 368 A ARG 369 n 369 ARG 369 A ILE 370 n 370 ILE 370 A VAL 371 n 371 VAL 371 A THR 372 n 372 THR 372 A GLU 373 n 373 GLU 373 A ILE 374 n 374 ILE 374 A PHE 375 n 375 PHE 375 A ASP 376 n 376 ASP 376 A GLU 377 n 377 GLU 377 A VAL 378 n 378 VAL 378 A ALA 379 n 379 ALA 379 A GLU 380 n 380 GLU 380 A ALA 381 n 381 ALA 381 A HIS 382 n 382 HIS 382 A LEU 383 n 383 LEU 383 A ILE 384 n 384 ILE 384 A GLN 385 n 385 GLN 385 A PRO 386 n 386 PRO 386 A THR 387 n 387 THR 387 A PHE 388 n 388 PHE 388 A ILE 389 n 389 ILE 389 A THR 390 n 390 THR 390 A GLU 391 n 391 GLU 391 A TYR 392 n 392 TYR 392 A PRO 393 n 393 PRO 393 A ALA 394 n 394 ALA 394 A GLU 395 n 395 GLU 395 A VAL 396 n 396 VAL 396 A SER 397 n 397 SER 397 A PRO 398 n 398 PRO 398 A LEU 399 n 399 LEU 399 A ALA 400 n 400 ALA 400 A ARG 401 n 401 ARG 401 A ARG 402 n 402 ARG 402 A ASN 403 n 403 ASN 403 A ASP 404 n 404 ASP 404 A VAL 405 n 405 VAL 405 A ASN 406 n 406 ASN 406 A PRO 407 n 407 PRO 407 A GLU 408 n 408 GLU 408 A ILE 409 n 409 ILE 409 A THR 410 n 410 THR 410 A ASP 411 n 411 ASP 411 A ARG 412 n 412 ARG 412 A PHE 413 n 413 PHE 413 A GLU 414 n 414 GLU 414 A PHE 415 n 415 PHE 415 A PHE 416 n 416 PHE 416 A ILE 417 n 417 ILE 417 A GLY 418 n 418 GLY 418 A GLY 419 n 419 GLY 419 A ARG 420 n 420 ARG 420 A GLU 421 n 421 GLU 421 A ILE 422 n 422 ILE 422 A GLY 423 n 423 GLY 423 A ASN 424 n 424 ASN 424 A GLY 425 n 425 GLY 425 A PHE 426 n 426 PHE 426 A SER 427 n 427 SER 427 A GLU 428 n 428 GLU 428 A LEU 429 n 429 LEU 429 A ASN 430 n 430 ASN 430 A ASP 431 n 431 ASP 431 A ALA 432 n 432 ALA 432 A GLU 433 n 433 GLU 433 A ASP 434 n 434 ASP 434 A GLN 435 n 435 GLN 435 A ALA 436 n 436 ALA 436 A GLU 437 n 437 GLU 437 A ARG 438 n 438 ARG 438 A PHE 439 n 439 PHE 439 A GLN 440 n 440 GLN 440 A GLU 441 n 441 GLU 441 A GLN 442 n 442 GLN 442 A VAL 443 n 443 VAL 443 A ASN 444 n 444 ASN 444 A ALA 445 n 445 ALA 445 A LYS 446 n 446 LYS 446 A ALA 447 n 447 ALA 447 A ALA 448 n 448 ALA 448 A GLY 449 n 449 GLY 449 A ASP 450 n 450 ASP 450 A ASP 451 n 451 ASP 451 A GLU 452 n 452 GLU 452 A ALA 453 n 453 ALA 453 A MET 454 n 454 MET 454 A PHE 455 n 455 PHE 455 A TYR 456 n 456 TYR 456 A ASP 457 n 457 ASP 457 A GLU 458 n 458 GLU 458 A ASP 459 n 459 ASP 459 A TYR 460 n 460 TYR 460 A VAL 461 n 461 VAL 461 A THR 462 n 462 THR 462 A ALA 463 n 463 ALA 463 A LEU 464 n 464 LEU 464 A GLU 465 n 465 GLU 465 A TYR 466 n 466 TYR 466 A GLY 467 n 467 GLY 467 A LEU 468 n 468 LEU 468 A PRO 469 n 469 PRO 469 A PRO 470 n 470 PRO 470 A THR 471 n 471 THR 471 A ALA 472 n 472 ALA 472 A GLY 473 n 473 GLY 473 A LEU 474 n 474 LEU 474 A GLY 475 n 475 GLY 475 A ILE 476 n 476 ILE 476 A GLY 477 n 477 GLY 477 A ILE 478 n 478 ILE 478 A ASP 479 n 479 ASP 479 A ARG 480 n 480 ARG 480 A MET 481 n 481 MET 481 A ILE 482 n 482 ILE 482 A MET 483 n 483 MET 483 A LEU 484 n 484 LEU 484 A PHE 485 n 485 PHE 485 A THR 486 n 486 THR 486 A ASN 487 n 487 ASN 487 A SER 488 n 488 SER 488 A HIS 489 n 489 HIS 489 A THR 490 n 490 THR 490 A ILE 491 n 491 ILE 491 A ARG 492 n 492 ARG 492 A ASP 493 n 493 ASP 493 A VAL 494 n 494 VAL 494 A ILE 495 n 495 ILE 495 A LEU 496 n 496 LEU 496 A PHE 497 n 497 PHE 497 A PRO 498 n 498 PRO 498 A ALA 499 n 499 ALA 499 A MET 500 n 500 MET 500 A ARG 501 n 501 ARG 501 A PRO 502 n 502 PRO 502 A n 503 503 A n 504 504 A author_and_software_defined_assembly PISA 2 dimeric 14310 -101.0 35380 A GLU 414 A OE2 GLU 414 1_555 A MG 515 D MG MG 1_555 A GLU 421 A OE2 GLU 421 1_555 57.3 A GLU 414 A OE2 GLU 414 1_555 A MG 515 D MG MG 1_555 A ACP 512 C O1A ACP 1_555 89.6 A GLU 421 A OE2 GLU 421 1_555 A MG 515 D MG MG 1_555 A ACP 512 C O1A ACP 1_555 58.2 A GLU 414 A OE2 GLU 414 1_555 A MG 515 D MG MG 1_555 A ACP 512 C O1B ACP 1_555 123.5 A GLU 421 A OE2 GLU 421 1_555 A MG 515 D MG MG 1_555 A ACP 512 C O1B ACP 1_555 68.4 A ACP 512 C O1A ACP 1_555 A MG 515 D MG MG 1_555 A ACP 512 C O1B ACP 1_555 73.5 A GLU 421 A OE1 GLU 421 1_555 A MG 517 F MG MG 1_555 A ACP 512 C O1B ACP 1_555 71.2 A GLU 421 A OE1 GLU 421 1_555 A MG 517 F MG MG 1_555 A ACP 512 C O3G ACP 1_555 72.5 A ACP 512 C O1B ACP 1_555 A MG 517 F MG MG 1_555 A ACP 512 C O3G ACP 1_555 80.1 A ACP 512 C O2B ACP 1_555 A MG 516 E MG MG 1_555 A ACP 512 C O1G ACP 1_555 74.5 A ACP 512 C O2B ACP 1_555 A MG 516 E MG MG 1_555 A HOH 2172 M O HOH 1_555 78.9 A ACP 512 C O1G ACP 1_555 A MG 516 E MG MG 1_555 A HOH 2172 M O HOH 1_555 153.3 A ACP 512 C O2B ACP 1_555 A MG 516 E MG MG 1_555 A HOH 2303 M O HOH 1_555 66.1 A ACP 512 C O1G ACP 1_555 A MG 516 E MG MG 1_555 A HOH 2303 M O HOH 1_555 111.6 A HOH 2172 M O HOH 1_555 A MG 516 E MG MG 1_555 A HOH 2303 M O HOH 1_555 53.5 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_555 y,x,-z+1/3 crystal symmetry operation 0.0000000000 0.0000000000 58.4633333333 A O VAL 67 A O VAL 67 A N GLY 125 A N GLY 125 A O THR 126 A O THR 126 A N HIS 138 A N HIS 138 A O ILE 137 A O ILE 137 A N GLN 95 A N GLN 95 A O GLY 92 A O GLY 92 A N ASP 89 A N ASP 89 A O ALA 82 A O ALA 82 A N MET 79 A N MET 79 A O THR 224 A O THR 224 A N MET 233 A N MET 233 A O VAL 254 A O VAL 254 A N TYR 280 A N TYR 280 A O MET 277 A O MET 277 A N ILE 476 A N ILE 476 A O GLY 473 A O GLY 473 A N PHE 426 A N PHE 426 A O ARG 420 A O ARG 420 A N ILE 417 A N ILE 417 A O GLU 414 A O GLU 414 A N ILE 389 A N ILE 389 A O PHE 388 A O PHE 388 A N GLU 324 A N GLU 324 A O VAL 310 A O VAL 310 A N PHE 317 A N PHE 317 A O ILE 120 A O ILE 120 A N THR 146 A N THR 146 1 A CG1 ILE 12 A CG1 ILE 12 1 Y 1 A CG2 ILE 12 A CG2 ILE 12 1 Y 1 A CD1 ILE 12 A CD1 ILE 12 1 Y 1 A CG ASP 13 A CG ASP 13 1 Y 1 A OD1 ASP 13 A OD1 ASP 13 1 Y 1 A OD2 ASP 13 A OD2 ASP 13 1 Y 1 A NE ARG 19 A NE ARG 19 1 Y 1 A CZ ARG 19 A CZ ARG 19 1 Y 1 A NH1 ARG 19 A NH1 ARG 19 1 Y 1 A NH2 ARG 19 A NH2 ARG 19 1 Y 1 A CG GLU 50 A CG GLU 50 1 Y 1 A CD GLU 50 A CD GLU 50 1 Y 1 A OE1 GLU 50 A OE1 GLU 50 1 Y 1 A OE2 GLU 50 A OE2 GLU 50 1 Y 1 A CE LYS 55 A CE LYS 55 1 Y 1 A NZ LYS 55 A NZ LYS 55 1 Y 1 A CG GLN 58 A CG GLN 58 1 Y 1 A CD GLN 58 A CD GLN 58 1 Y 1 A OE1 GLN 58 A OE1 GLN 58 1 Y 1 A NE2 GLN 58 A NE2 GLN 58 1 Y 1 A CG GLU 61 A CG GLU 61 1 Y 1 A CD GLU 61 A CD GLU 61 1 Y 1 A OE1 GLU 61 A OE1 GLU 61 1 Y 1 A OE2 GLU 61 A OE2 GLU 61 1 Y 1 A CG ARG 77 A CG ARG 77 1 Y 1 A CD ARG 77 A CD ARG 77 1 Y 1 A NE ARG 77 A NE ARG 77 1 Y 1 A CZ ARG 77 A CZ ARG 77 1 Y 1 A NH1 ARG 77 A NH1 ARG 77 1 Y 1 A NH2 ARG 77 A NH2 ARG 77 1 Y 1 A CG GLN 131 A CG GLN 131 1 Y 1 A CD GLN 131 A CD GLN 131 1 Y 1 A OE1 GLN 131 A OE1 GLN 131 1 Y 1 A NE2 GLN 131 A NE2 GLN 131 1 Y 1 A CG GLU 134 A CG GLU 134 1 Y 1 A CD GLU 134 A CD GLU 134 1 Y 1 A OE1 GLU 134 A OE1 GLU 134 1 Y 1 A OE2 GLU 134 A OE2 GLU 134 1 Y 1 A CG ASP 161 A CG ASP 161 1 Y 1 A OD1 ASP 161 A OD1 ASP 161 1 Y 1 A OD2 ASP 161 A OD2 ASP 161 1 Y 1 A CG GLN 162 A CG GLN 162 1 Y 1 A CD GLN 162 A CD GLN 162 1 Y 1 A OE1 GLN 162 A OE1 GLN 162 1 Y 1 A NE2 GLN 162 A NE2 GLN 162 1 Y 1 A CG GLU 163 A CG GLU 163 1 Y 1 A CD GLU 163 A CD GLU 163 1 Y 1 A OE1 GLU 163 A OE1 GLU 163 1 Y 1 A OE2 GLU 163 A OE2 GLU 163 1 Y 1 A CG LYS 178 A CG LYS 178 1 Y 1 A CD LYS 178 A CD LYS 178 1 Y 1 A CE LYS 178 A CE LYS 178 1 Y 1 A NZ LYS 178 A NZ LYS 178 1 Y 1 A CD GLN 195 A CD GLN 195 1 Y 1 A OE1 GLN 195 A OE1 GLN 195 1 Y 1 A NE2 GLN 195 A NE2 GLN 195 1 Y 1 A NE ARG 220 A NE ARG 220 1 Y 1 A CZ ARG 220 A CZ ARG 220 1 Y 1 A NH1 ARG 220 A NH1 ARG 220 1 Y 1 A NH2 ARG 220 A NH2 ARG 220 1 Y 1 A CG GLU 291 A CG GLU 291 1 Y 1 A CD GLU 291 A CD GLU 291 1 Y 1 A OE1 GLU 291 A OE1 GLU 291 1 Y 1 A OE2 GLU 291 A OE2 GLU 291 1 Y 1 A CG GLU 303 A CG GLU 303 1 Y 1 A CD GLU 303 A CD GLU 303 1 Y 1 A OE1 GLU 303 A OE1 GLU 303 1 Y 1 A OE2 GLU 303 A OE2 GLU 303 1 Y 1 A CE LYS 309 A CE LYS 309 1 Y 1 A NZ LYS 309 A NZ LYS 309 1 Y 1 A CG GLU 314 A CG GLU 314 1 Y 1 A CD GLU 314 A CD GLU 314 1 Y 1 A OE1 GLU 314 A OE1 GLU 314 1 Y 1 A OE2 GLU 314 A OE2 GLU 314 1 Y 1 A CG LYS 321 A CG LYS 321 1 Y 1 A CD LYS 321 A CD LYS 321 1 Y 1 A CE LYS 321 A CE LYS 321 1 Y 1 A NZ LYS 321 A NZ LYS 321 1 Y 1 A CG GLU 324 A CG GLU 324 1 Y 1 A CD GLU 324 A CD GLU 324 1 Y 1 A OE1 GLU 324 A OE1 GLU 324 1 Y 1 A OE2 GLU 324 A OE2 GLU 324 1 Y 1 A CG ASP 345 A CG ASP 345 1 Y 1 A OD1 ASP 345 A OD1 ASP 345 1 Y 1 A OD2 ASP 345 A OD2 ASP 345 1 Y 1 A CG ASP 451 A CG ASP 451 1 Y 1 A OD1 ASP 451 A OD1 ASP 451 1 Y 1 A OD2 ASP 451 A OD2 ASP 451 1 Y 1 A CG GLU 458 A CG GLU 458 1 Y 1 A CD GLU 458 A CD GLU 458 1 Y 1 A OE1 GLU 458 A OE1 GLU 458 1 Y 1 A OE2 GLU 458 A OE2 GLU 458 1 Y 1 A SER 1 A SER 1 1 Y 1 A GLU 2 A GLU 2 1 Y 1 A GLN 3 A GLN 3 1 Y 1 A GLU 4 A GLU 4 1 Y 1 A THR 5 A THR 5 1 Y 1 A ARG 6 A ARG 6 1 Y 1 A GLY 7 A GLY 7 1 Y 1 A ALA 8 A ALA 8 1 Y 1 A ASN 9 A ASN 9 1 Y 1 A GLU 10 A GLU 10 1 Y 1 A ASP 154 A ASP 154 1 Y 1 A LYS 155 A LYS 155 1 Y 1 A PHE 156 A PHE 156 1 Y 1 A HIS 157 A HIS 157 1 Y 1 A GLY 158 A GLY 158 1 Y 1 A LEU 159 A LEU 159 1 Y 1 A GLN 160 A GLN 160 1 Y 1 A GLN 503 A GLN 503 1 Y 1 A LYS 504 A LYS 504 1 Y 1 A ASP 38 -145.16 -29.77 1 A ASP 89 -128.12 -169.29 1 A ASP 230 39.03 48.27 1 A ALA 238 -170.41 144.54 1 A ARG 336 -153.92 67.55 1 A ASP 450 -64.60 88.87 PROTEIN_REP.PARAM TOPHCSDX.PRO THE ASSIGNMENT OF THE ELECTRON DENSITY PEAKS AS MG2+ IONSIS BASED ON THE POSITIONS OBSERVED FOR METAL IONS WHEN THE ELECTRON-DENSE MN2+ IONS WERE USED 0.228 0.006 .176 .176 2.43 12.0 1347 33420 4.0 84.7 RANDOM 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT 1E1O 20.0 2.43 12.0 306 4202 80 0 3816 0.006 1.4 20.4 2.4 2.39 1.5 3.66 2.0 4.52 2.0 6.9 2.5 0.329 0.03 0.257 2.54 127 2895 8 4.3 65.1 2.430 25.000 1E22 33781 0.06500 0.06500 1 8.1000 3.600 84.7 0.09900 2.43 2.54 6.300 0.09900 1 3.10 65.1 refinement X-PLOR 3.1 data reduction MOSFLM data scaling CCP4 phasing X-PLOR 3.1 LYSYL-TRNA SYNTHETASE (LYSU) HEXAGONAL FORM complexed with lysine and the non-hydrolysable atp analogue amp-pcp 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 5 N N 5 N N 5 N N 5 N N 5 N N 5 N N 6 N N A ALA 11 A ALA 11 HELX_P A GLY 32 A GLY 32 1 1 22 A THR 44 A THR 44 HELX_P A ASP 53 A ASP 53 1 2 10 A ASP 56 A ASP 56 HELX_P A ASN 64 A ASN 64 1 3 9 A GLY 106 A GLY 106 HELX_P A GLN 111 A GLN 111 1 4 6 A PHE 112 A PHE 112 HELX_P A TRP 115 A TRP 115 5 5 4 A GLN 162 A GLN 162 HELX_P A GLN 168 A GLN 168 1 6 7 A GLN 168 A GLN 168 HELX_P A ASN 176 A ASN 176 1 7 9 A ASN 176 A ASN 176 HELX_P A ARG 200 A ARG 200 1 8 25 A PRO 239 A PRO 239 HELX_P A GLY 250 A GLY 250 1 9 12 A ASP 285 A ASP 285 HELX_P A GLY 306 A GLY 306 1 10 22 A MET 328 A MET 328 HELX_P A ARG 336 A ARG 336 1 11 9 A ASP 340 A ASP 340 HELX_P A ASP 345 A ASP 345 5 12 6 A ASN 346 A ASN 346 HELX_P A ILE 357 A ILE 357 1 13 12 A GLY 366 A GLY 366 HELX_P A ALA 379 A ALA 379 1 14 14 A GLU 380 A GLU 380 HELX_P A LEU 383 A LEU 383 5 15 4 A ALA 394 A ALA 394 HELX_P A SER 397 A SER 397 5 16 4 A ASP 431 A ASP 431 HELX_P A ALA 448 A ALA 448 1 17 18 A ASP 457 A ASP 457 HELX_P A GLY 467 A GLY 467 1 18 11 A ILE 478 A ILE 478 HELX_P A THR 486 A THR 486 1 19 9 A THR 490 A THR 490 HELX_P A VAL 494 A VAL 494 5 20 5 metalc 2.345 A GLU 414 A OE2 GLU 414 1_555 A MG 515 D MG MG 1_555 metalc 2.815 A GLU 421 A OE2 GLU 421 1_555 A MG 515 D MG MG 1_555 metalc 2.301 A GLU 421 A OE1 GLU 421 1_555 A MG 517 F MG MG 1_555 metalc 2.263 A ACP 512 C O1A ACP 1_555 A MG 515 D MG MG 1_555 metalc 2.434 A ACP 512 C O1B ACP 1_555 A MG 515 D MG MG 1_555 metalc 2.460 A ACP 512 C O2B ACP 1_555 A MG 516 E MG MG 1_555 metalc 2.755 A ACP 512 C O1G ACP 1_555 A MG 516 E MG MG 1_555 metalc 2.443 A ACP 512 C O1B ACP 1_555 A MG 517 F MG MG 1_555 metalc 2.361 A ACP 512 C O3G ACP 1_555 A MG 517 F MG MG 1_555 metalc 2.898 A MG 516 E MG MG 1_555 A HOH 2172 M O HOH 1_555 metalc 2.759 A MG 516 E MG MG 1_555 A HOH 2303 M O HOH 1_555 LIGASE LIGASE, AMINOACYL-TRNA SYNTHETASE, PROTEIN BIOSYNTHESIS SYK2_ECOLI UNP 1 P14825 1 504 1E22 1 504 P14825 A 1 1 504 6 2 7 2 2 anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A GLU 66 A GLU 66 A ARG 72 A ARG 72 A ILE 120 A ILE 120 A LYS 129 A LYS 129 A LEU 135 A LEU 135 A CYS 139 A CYS 139 A GLY 92 A GLY 92 A ALA 99 A ALA 99 A ALA 82 A ALA 82 A ASP 89 A ASP 89 A ARG 72 A ARG 72 A MET 79 A MET 79 A ILE 223 A ILE 223 A HIS 226 A HIS 226 A LEU 231 A LEU 231 A TYR 234 A TYR 234 A ARG 253 A ARG 253 A PHE 261 A PHE 261 A GLU 273 A GLU 273 A ALA 282 A ALA 282 A THR 471 A THR 471 A GLY 477 A GLY 477 A ARG 420 A ARG 420 A SER 427 A SER 427 A ARG 412 A ARG 412 A ILE 417 A ILE 417 A THR 387 A THR 387 A THR 390 A THR 390 A GLU 324 A GLU 324 A THR 327 A THR 327 A LYS 309 A LYS 309 A TYR 312 A TYR 312 A HIS 315 A HIS 315 A ASP 318 A ASP 318 A ILE 120 A ILE 120 A ARG 124 A ARG 124 A GLU 141 A GLU 141 A THR 146 A THR 146 BINDING SITE FOR RESIDUE MG A 515 A MG 515 Software 5 BINDING SITE FOR RESIDUE MG A 516 A MG 516 Software 4 BINDING SITE FOR RESIDUE MG A 517 A MG 517 Software 3 BINDING SITE FOR RESIDUE LYS A 510 A LYS 510 Software 13 BINDING SITE FOR RESIDUE ACP A 512 A ACP 512 Software 21 BINDING SITE FOR RESIDUE GOL A 520 A GOL 520 Software 6 BINDING SITE FOR RESIDUE GOL A 521 A GOL 521 Software 8 BINDING SITE FOR RESIDUE GOL A 522 A GOL 522 Software 6 BINDING SITE FOR RESIDUE GOL A 523 A GOL 523 Software 10 BINDING SITE FOR RESIDUE GOL A 524 A GOL 524 Software 12 BINDING SITE FOR RESIDUE GOL A 525 A GOL 525 Software 7 A ARG 412 A ARG 412 5 1_555 A GLU 414 A GLU 414 5 1_555 A GLU 421 A GLU 421 5 1_555 A ACP 512 C ACP 5 1_555 A MG 517 F MG 5 1_555 A GLU 264 A GLU 264 4 1_555 A ACP 512 C ACP 4 1_555 A HOH 2172 M HOH 4 1_555 A HOH 2303 M HOH 4 1_555 A GLU 421 A GLU 421 3 1_555 A ACP 512 C ACP 3 1_555 A MG 515 D MG 3 1_555 A GLY 216 A GLY 216 13 1_555 A ALA 217 A ALA 217 13 1_555 A GLU 240 A GLU 240 13 1_555 A ARG 262 A ARG 262 13 1_555 A MET 276 A MET 276 13 1_555 A GLU 278 A GLU 278 13 1_555 A TYR 280 A TYR 280 13 1_555 A ASN 424 A ASN 424 13 1_555 A PHE 426 A PHE 426 13 1_555 A GLU 428 A GLU 428 13 1_555 A GLY 473 A GLY 473 13 1_555 A ACP 512 C ACP 13 1_555 A GOL 523 J GOL 13 1_555 A ARG 262 A ARG 262 21 1_555 A GLU 264 A GLU 264 21 1_555 A ARG 269 A ARG 269 21 1_555 A HIS 270 A HIS 270 21 1_555 A ASN 271 A ASN 271 21 1_555 A PHE 274 A PHE 274 21 1_555 A GLU 380 A GLU 380 21 1_555 A GLU 414 A GLU 414 21 1_555 A GLU 421 A GLU 421 21 1_555 A ILE 422 A ILE 422 21 1_555 A GLY 477 A GLY 477 21 1_555 A ARG 480 A ARG 480 21 1_555 A ILE 491 A ILE 491 21 1_555 A LYS 510 B LYS 21 1_555 A MG 515 D MG 21 1_555 A MG 516 E MG 21 1_555 A MG 517 F MG 21 1_555 A GOL 523 J GOL 21 1_555 A HOH 2258 M HOH 21 1_555 A HOH 2302 M HOH 21 1_555 A HOH 2303 M HOH 21 1_555 A TYR 312 A TYR 312 6 1_555 A HIS 315 A HIS 315 6 1_555 A ILE 384 A ILE 384 6 1_555 A GLY 418 A GLY 418 6 1_555 A ARG 420 A ARG 420 6 1_555 A HIS 489 A HIS 489 6 1_555 A ARG 194 A ARG 194 8 1_555 A ARG 194 A ARG 194 8 7_555 A GLU 204 A GLU 204 8 7_555 A GLU 206 A GLU 206 8 7_555 A ILE 257 A ILE 257 8 1_555 A ASN 258 A ASN 258 8 1_555 A ASN 258 A ASN 258 8 7_555 A HOH 2169 M HOH 8 1_555 A TYR 286 A TYR 286 6 1_555 A GLU 391 A GLU 391 6 1_555 A ASN 403 A ASN 403 6 1_555 A THR 410 A THR 410 6 1_555 A ASP 411 A ASP 411 6 1_555 A ARG 412 A ARG 412 6 1_555 A ALA 217 A ALA 217 10 1_555 A SER 218 A SER 218 10 1_555 A VAL 396 A VAL 396 10 1_555 A ARG 412 A ARG 412 10 1_555 A ASN 424 A ASN 424 10 1_555 A PHE 426 A PHE 426 10 1_555 A LYS 510 B LYS 10 1_555 A ACP 512 C ACP 10 1_555 A HOH 2152 M HOH 10 1_555 A HOH 2305 M HOH 10 1_555 A PRO 214 A PRO 214 12 1_555 A GLY 215 A GLY 215 12 1_555 A ALA 217 A ALA 217 12 1_555 A SER 218 A SER 218 12 1_555 A ALA 219 A ALA 219 12 1_555 A PRO 221 A PRO 221 12 1_555 A ILE 237 A ILE 237 12 1_555 A LYS 446 A LYS 446 12 1_555 A GLU 452 A GLU 452 12 1_555 A ALA 453 A ALA 453 12 1_555 A MET 454 A MET 454 12 1_555 A PHE 455 A PHE 455 12 1_555 A VAL 33 A VAL 33 7 6_555 A LYS 333 A LYS 333 7 1_555 A ARG 402 A ARG 402 7 11_555 A ASN 403 A ASN 403 7 11_555 A ASP 404 A ASP 404 7 11_555 A HOH 2250 M HOH 7 11_555 A HOH 2306 M HOH 7 1_555 178 P 61 2 2