0.008772
0.000000
0.000000
0.000000
0.008453
0.000000
0.000000
0.000000
0.009208
0.00000
0.00000
0.00000
Vogt, J.
Scapozza, L.
Schulz, G.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
114.000
118.300
108.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C12 H16 N2 O4
252.266
1-[4-HYDROXY-5-(HYDROXYMETHYL)BICYCLO[3.1.0]HEX-2-YL]-5-METHYLPYRIMIDINE-2,4(1H,3H)-DIONE
(N)-METHANOCARBA-THYMIDINE
non-polymer
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
S
N
305
N
O
N
306
N
O
N
307
N
O
N
308
N
O
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
R
C
N
314
N
O
N
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
O
N
327
N
O
N
328
N
O
N
329
N
O
Y
330
N
N
Y
331
N
N
N
332
R
C
N
333
S
C
N
334
N
C
N
335
S
C
N
336
S
C
N
337
N
C
N
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
N
343
N
C
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
N
N
361
S
C
N
362
N
C
N
363
N
O
N
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
N
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
N
N
388
S
C
N
389
N
C
N
390
N
O
N
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
N
398
N
O
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
N
N
412
S
C
N
413
N
C
N
414
N
O
N
415
N
C
N
416
N
C
N
417
N
C
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
doub
N
316
N
sing
Y
317
N
sing
Y
318
N
sing
Y
319
N
sing
Y
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
Y
339
N
sing
Y
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
Y
357
N
doub
Y
358
N
sing
Y
359
N
sing
N
360
N
sing
Y
361
N
doub
Y
362
N
sing
Y
363
N
sing
N
364
N
sing
Y
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
doub
N
390
N
sing
Y
391
N
doub
N
392
N
sing
Y
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
39
9597
10.1021/BI000668Q
10924157
Kinetics and Crystal Structure of the Wild-Type and the Engineered Y101F Mutant of Herpes Simplex Virus Type 1 Thymidine Kinase Interacting with (North)-Methanocarba-Thymidine
2000
NE
FEBS Lett.
FEBLAL
0165
0014-5793
368
289
10.1016/0014-5793(95)00680-8
7628623
The Three-Dimensional Structure of Thymidine Kinase from Herpes Simplex Virus Type 1
1995
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
2
876
10.1038/NSB1095-876
7552712
Crystal Structures of the Thymidine Kinase from Herpes Simplex Virus Type-1 in Complex with Deoxythymidine and Ganciclovir
1995
10.2210/pdb1e2l/pdb
pdb_00001e2l
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
IMAGE PLATE
1999-07-15
MARRESEARCH
GRAPHITE(002)
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU/MSC FR-C
35763.086
THYMIDINE KINASE
2.7.1.21
2
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
252.266
1-[4-HYDROXY-5-(HYDROXYMETHYL)BICYCLO[3.1.0]HEX-2-YL]-5-METHYLPYRIMIDINE-2,4(1H,3H)-DIONE
2
syn
non-polymer
18.015
water
150
nat
water
no
no
MPTLLRVYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIANIFTTQHRLDQGEISAGDAAVVMTSAQ
ITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDRHPIAALLCYPAARYLMGSMTPQAVLAFVALIPPTLPGTNIVL
GALPEDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQLSGTAVPPQGAEPQSNAGPRPHIG
DTLFTLFRAPELLAPNGDLYNVFAWALDVLAKRLRSMHVFILDYDQSPAGCRDALLQLTSGMVQTHVTTPGSIPTICDLA
RTFAREMGEAN
MPTLLRVYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIANIFTTQHRLDQGEISAGDAAVVMTSAQ
ITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDRHPIAALLCYPAARYLMGSMTPQAVLAFVALIPPTLPGTNIVL
GALPEDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQLSGTAVPPQGAEPQSNAGPRPHIG
DTLFTLFRAPELLAPNGDLYNVFAWALDVLAKRLRSMHVFILDYDQSPAGCRDALLQLTSGMVQTHVTTPGSIPTICDLA
RTFAREMGEAN
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
17
sample
10299
HERPES SIMPLEX VIRUS (TYPE 1 / STRAIN 17)
562
ESCHERICHIA COLI
1
2.56
51.94
7.50
LITHIUM SULFATE, HEPES, DTT, (N)-MCT, pH 7.50
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2000-08-18
1
1
2011-05-08
1
2
2011-07-13
1
3
2023-12-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBE
Y
PDBE
2000-05-23
REL
REL
SO4
SULFATE ION
TMC
1-[4-HYDROXY-5-(HYDROXYMETHYL)BICYCLO[3.1.0]HEX-2-YL]-5-METHYLPYRIMIDINE-2,4(1H,3H)-DIONE
HOH
water
CHAIN A AND B ENGINEERED MUTATION TYR101PHE
1VTK
PDB
experimental model
SO4
400
2
SO4
SO4
400
A
TMC
500
3
TMC
TMC
500
A
SO4
400
2
SO4
SO4
400
B
TMC
500
3
TMC
TMC
500
B
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2060
4
HOH
HOH
2060
A
HOH
2061
4
HOH
HOH
2061
A
HOH
2062
4
HOH
HOH
2062
A
HOH
2063
4
HOH
HOH
2063
A
HOH
2064
4
HOH
HOH
2064
A
HOH
2065
4
HOH
HOH
2065
A
HOH
2066
4
HOH
HOH
2066
A
HOH
2067
4
HOH
HOH
2067
A
HOH
2068
4
HOH
HOH
2068
A
HOH
2069
4
HOH
HOH
2069
A
HOH
2070
4
HOH
HOH
2070
A
HOH
2071
4
HOH
HOH
2071
A
HOH
2072
4
HOH
HOH
2072
A
HOH
2073
4
HOH
HOH
2073
A
HOH
2074
4
HOH
HOH
2074
A
HOH
2075
4
HOH
HOH
2075
A
HOH
2076
4
HOH
HOH
2076
A
HOH
2077
4
HOH
HOH
2077
A
HOH
2001
4
HOH
HOH
2001
B
HOH
2002
4
HOH
HOH
2002
B
HOH
2003
4
HOH
HOH
2003
B
HOH
2004
4
HOH
HOH
2004
B
HOH
2005
4
HOH
HOH
2005
B
HOH
2006
4
HOH
HOH
2006
B
HOH
2007
4
HOH
HOH
2007
B
HOH
2008
4
HOH
HOH
2008
B
HOH
2009
4
HOH
HOH
2009
B
HOH
2010
4
HOH
HOH
2010
B
HOH
2011
4
HOH
HOH
2011
B
HOH
2012
4
HOH
HOH
2012
B
HOH
2013
4
HOH
HOH
2013
B
HOH
2014
4
HOH
HOH
2014
B
HOH
2015
4
HOH
HOH
2015
B
HOH
2016
4
HOH
HOH
2016
B
HOH
2017
4
HOH
HOH
2017
B
HOH
2018
4
HOH
HOH
2018
B
HOH
2019
4
HOH
HOH
2019
B
HOH
2020
4
HOH
HOH
2020
B
HOH
2021
4
HOH
HOH
2021
B
HOH
2022
4
HOH
HOH
2022
B
HOH
2023
4
HOH
HOH
2023
B
HOH
2024
4
HOH
HOH
2024
B
HOH
2025
4
HOH
HOH
2025
B
HOH
2026
4
HOH
HOH
2026
B
HOH
2027
4
HOH
HOH
2027
B
HOH
2028
4
HOH
HOH
2028
B
HOH
2029
4
HOH
HOH
2029
B
HOH
2030
4
HOH
HOH
2030
B
HOH
2031
4
HOH
HOH
2031
B
HOH
2032
4
HOH
HOH
2032
B
HOH
2033
4
HOH
HOH
2033
B
HOH
2034
4
HOH
HOH
2034
B
HOH
2035
4
HOH
HOH
2035
B
HOH
2036
4
HOH
HOH
2036
B
HOH
2037
4
HOH
HOH
2037
B
HOH
2038
4
HOH
HOH
2038
B
HOH
2039
4
HOH
HOH
2039
B
HOH
2040
4
HOH
HOH
2040
B
HOH
2041
4
HOH
HOH
2041
B
HOH
2042
4
HOH
HOH
2042
B
HOH
2043
4
HOH
HOH
2043
B
HOH
2044
4
HOH
HOH
2044
B
HOH
2045
4
HOH
HOH
2045
B
HOH
2046
4
HOH
HOH
2046
B
HOH
2047
4
HOH
HOH
2047
B
HOH
2048
4
HOH
HOH
2048
B
HOH
2049
4
HOH
HOH
2049
B
HOH
2050
4
HOH
HOH
2050
B
HOH
2051
4
HOH
HOH
2051
B
HOH
2052
4
HOH
HOH
2052
B
HOH
2053
4
HOH
HOH
2053
B
HOH
2054
4
HOH
HOH
2054
B
HOH
2055
4
HOH
HOH
2055
B
HOH
2056
4
HOH
HOH
2056
B
HOH
2057
4
HOH
HOH
2057
B
HOH
2058
4
HOH
HOH
2058
B
HOH
2059
4
HOH
HOH
2059
B
HOH
2060
4
HOH
HOH
2060
B
HOH
2061
4
HOH
HOH
2061
B
HOH
2062
4
HOH
HOH
2062
B
HOH
2063
4
HOH
HOH
2063
B
HOH
2064
4
HOH
HOH
2064
B
HOH
2065
4
HOH
HOH
2065
B
HOH
2066
4
HOH
HOH
2066
B
HOH
2067
4
HOH
HOH
2067
B
HOH
2068
4
HOH
HOH
2068
B
HOH
2069
4
HOH
HOH
2069
B
HOH
2070
4
HOH
HOH
2070
B
HOH
2071
4
HOH
HOH
2071
B
HOH
2072
4
HOH
HOH
2072
B
HOH
2073
4
HOH
HOH
2073
B
MET
46
n
1
MET
46
A
PRO
47
n
2
PRO
47
A
THR
48
n
3
THR
48
A
LEU
49
n
4
LEU
49
A
LEU
50
n
5
LEU
50
A
ARG
51
n
6
ARG
51
A
VAL
52
n
7
VAL
52
A
TYR
53
n
8
TYR
53
A
ILE
54
n
9
ILE
54
A
ASP
55
n
10
ASP
55
A
GLY
56
n
11
GLY
56
A
PRO
57
n
12
PRO
57
A
HIS
58
n
13
HIS
58
A
GLY
59
n
14
GLY
59
A
MET
60
n
15
MET
60
A
GLY
61
n
16
GLY
61
A
LYS
62
n
17
LYS
62
A
THR
63
n
18
THR
63
A
THR
64
n
19
THR
64
A
THR
65
n
20
THR
65
A
THR
66
n
21
THR
66
A
GLN
67
n
22
GLN
67
A
LEU
68
n
23
LEU
68
A
LEU
69
n
24
LEU
69
A
n
25
70
A
n
26
71
A
n
27
72
A
n
28
73
A
n
29
74
A
n
30
75
A
n
31
76
A
ASP
77
n
32
ASP
77
A
ILE
78
n
33
ILE
78
A
VAL
79
n
34
VAL
79
A
TYR
80
n
35
TYR
80
A
VAL
81
n
36
VAL
81
A
PRO
82
n
37
PRO
82
A
GLU
83
n
38
GLU
83
A
PRO
84
n
39
PRO
84
A
MET
85
n
40
MET
85
A
THR
86
n
41
THR
86
A
TYR
87
n
42
TYR
87
A
TRP
88
n
43
TRP
88
A
ARG
89
n
44
ARG
89
A
VAL
90
n
45
VAL
90
A
LEU
91
n
46
LEU
91
A
GLY
92
n
47
GLY
92
A
ALA
93
n
48
ALA
93
A
SER
94
n
49
SER
94
A
GLU
95
n
50
GLU
95
A
THR
96
n
51
THR
96
A
ILE
97
n
52
ILE
97
A
ALA
98
n
53
ALA
98
A
ASN
99
n
54
ASN
99
A
ILE
100
n
55
ILE
100
A
PHE
101
n
56
PHE
101
A
THR
102
n
57
THR
102
A
THR
103
n
58
THR
103
A
GLN
104
n
59
GLN
104
A
HIS
105
n
60
HIS
105
A
ARG
106
n
61
ARG
106
A
LEU
107
n
62
LEU
107
A
ASP
108
n
63
ASP
108
A
GLN
109
n
64
GLN
109
A
GLY
110
n
65
GLY
110
A
GLU
111
n
66
GLU
111
A
ILE
112
n
67
ILE
112
A
SER
113
n
68
SER
113
A
ALA
114
n
69
ALA
114
A
GLY
115
n
70
GLY
115
A
ASP
116
n
71
ASP
116
A
ALA
117
n
72
ALA
117
A
ALA
118
n
73
ALA
118
A
VAL
119
n
74
VAL
119
A
VAL
120
n
75
VAL
120
A
MET
121
n
76
MET
121
A
THR
122
n
77
THR
122
A
SER
123
n
78
SER
123
A
ALA
124
n
79
ALA
124
A
GLN
125
n
80
GLN
125
A
ILE
126
n
81
ILE
126
A
THR
127
n
82
THR
127
A
MET
128
n
83
MET
128
A
GLY
129
n
84
GLY
129
A
MET
130
n
85
MET
130
A
PRO
131
n
86
PRO
131
A
TYR
132
n
87
TYR
132
A
ALA
133
n
88
ALA
133
A
VAL
134
n
89
VAL
134
A
THR
135
n
90
THR
135
A
ASP
136
n
91
ASP
136
A
ALA
137
n
92
ALA
137
A
VAL
138
n
93
VAL
138
A
LEU
139
n
94
LEU
139
A
ALA
140
n
95
ALA
140
A
PRO
141
n
96
PRO
141
A
HIS
142
n
97
HIS
142
A
ILE
143
n
98
ILE
143
A
GLY
144
n
99
GLY
144
A
GLY
145
n
100
GLY
145
A
GLU
146
n
101
GLU
146
A
ALA
147
n
102
ALA
147
A
GLY
148
n
103
GLY
148
A
SER
149
n
104
SER
149
A
n
105
150
A
n
106
151
A
n
107
152
A
PRO
153
n
108
PRO
153
A
PRO
154
n
109
PRO
154
A
PRO
155
n
110
PRO
155
A
ALA
156
n
111
ALA
156
A
LEU
157
n
112
LEU
157
A
THR
158
n
113
THR
158
A
LEU
159
n
114
LEU
159
A
ILE
160
n
115
ILE
160
A
PHE
161
n
116
PHE
161
A
ASP
162
n
117
ASP
162
A
ARG
163
n
118
ARG
163
A
HIS
164
n
119
HIS
164
A
PRO
165
n
120
PRO
165
A
ILE
166
n
121
ILE
166
A
ALA
167
n
122
ALA
167
A
ALA
168
n
123
ALA
168
A
LEU
169
n
124
LEU
169
A
LEU
170
n
125
LEU
170
A
CYS
171
n
126
CYS
171
A
TYR
172
n
127
TYR
172
A
PRO
173
n
128
PRO
173
A
ALA
174
n
129
ALA
174
A
ALA
175
n
130
ALA
175
A
ARG
176
n
131
ARG
176
A
TYR
177
n
132
TYR
177
A
LEU
178
n
133
LEU
178
A
MET
179
n
134
MET
179
A
GLY
180
n
135
GLY
180
A
SER
181
n
136
SER
181
A
MET
182
n
137
MET
182
A
THR
183
n
138
THR
183
A
PRO
184
n
139
PRO
184
A
GLN
185
n
140
GLN
185
A
ALA
186
n
141
ALA
186
A
VAL
187
n
142
VAL
187
A
LEU
188
n
143
LEU
188
A
ALA
189
n
144
ALA
189
A
PHE
190
n
145
PHE
190
A
VAL
191
n
146
VAL
191
A
ALA
192
n
147
ALA
192
A
LEU
193
n
148
LEU
193
A
ILE
194
n
149
ILE
194
A
PRO
195
n
150
PRO
195
A
PRO
196
n
151
PRO
196
A
THR
197
n
152
THR
197
A
LEU
198
n
153
LEU
198
A
PRO
199
n
154
PRO
199
A
GLY
200
n
155
GLY
200
A
THR
201
n
156
THR
201
A
ASN
202
n
157
ASN
202
A
ILE
203
n
158
ILE
203
A
VAL
204
n
159
VAL
204
A
LEU
205
n
160
LEU
205
A
GLY
206
n
161
GLY
206
A
ALA
207
n
162
ALA
207
A
LEU
208
n
163
LEU
208
A
PRO
209
n
164
PRO
209
A
GLU
210
n
165
GLU
210
A
ASP
211
n
166
ASP
211
A
ARG
212
n
167
ARG
212
A
HIS
213
n
168
HIS
213
A
ILE
214
n
169
ILE
214
A
ASP
215
n
170
ASP
215
A
ARG
216
n
171
ARG
216
A
LEU
217
n
172
LEU
217
A
ALA
218
n
173
ALA
218
A
LYS
219
n
174
LYS
219
A
ARG
220
n
175
ARG
220
A
GLN
221
n
176
GLN
221
A
ARG
222
n
177
ARG
222
A
PRO
223
n
178
PRO
223
A
GLY
224
n
179
GLY
224
A
GLU
225
n
180
GLU
225
A
ARG
226
n
181
ARG
226
A
LEU
227
n
182
LEU
227
A
ASP
228
n
183
ASP
228
A
LEU
229
n
184
LEU
229
A
ALA
230
n
185
ALA
230
A
MET
231
n
186
MET
231
A
LEU
232
n
187
LEU
232
A
ALA
233
n
188
ALA
233
A
ALA
234
n
189
ALA
234
A
ILE
235
n
190
ILE
235
A
ARG
236
n
191
ARG
236
A
ARG
237
n
192
ARG
237
A
VAL
238
n
193
VAL
238
A
TYR
239
n
194
TYR
239
A
GLY
240
n
195
GLY
240
A
LEU
241
n
196
LEU
241
A
LEU
242
n
197
LEU
242
A
ALA
243
n
198
ALA
243
A
ASN
244
n
199
ASN
244
A
THR
245
n
200
THR
245
A
VAL
246
n
201
VAL
246
A
ARG
247
n
202
ARG
247
A
TYR
248
n
203
TYR
248
A
LEU
249
n
204
LEU
249
A
GLN
250
n
205
GLN
250
A
CYS
251
n
206
CYS
251
A
GLY
252
n
207
GLY
252
A
GLY
253
n
208
GLY
253
A
SER
254
n
209
SER
254
A
TRP
255
n
210
TRP
255
A
ARG
256
n
211
ARG
256
A
GLU
257
n
212
GLU
257
A
ASP
258
n
213
ASP
258
A
TRP
259
n
214
TRP
259
A
GLY
260
n
215
GLY
260
A
GLN
261
n
216
GLN
261
A
LEU
262
n
217
LEU
262
A
SER
263
n
218
SER
263
A
GLY
264
n
219
GLY
264
A
n
220
265
A
n
221
266
A
n
222
267
A
n
223
268
A
n
224
269
A
n
225
270
A
n
226
271
A
n
227
272
A
n
228
273
A
n
229
274
A
n
230
275
A
n
231
276
A
n
232
277
A
n
233
278
A
n
234
279
A
PRO
280
n
235
PRO
280
A
ARG
281
n
236
ARG
281
A
PRO
282
n
237
PRO
282
A
HIS
283
n
238
HIS
283
A
ILE
284
n
239
ILE
284
A
GLY
285
n
240
GLY
285
A
ASP
286
n
241
ASP
286
A
THR
287
n
242
THR
287
A
LEU
288
n
243
LEU
288
A
PHE
289
n
244
PHE
289
A
THR
290
n
245
THR
290
A
LEU
291
n
246
LEU
291
A
PHE
292
n
247
PHE
292
A
ARG
293
n
248
ARG
293
A
ALA
294
n
249
ALA
294
A
PRO
295
n
250
PRO
295
A
GLU
296
n
251
GLU
296
A
LEU
297
n
252
LEU
297
A
LEU
298
n
253
LEU
298
A
ALA
299
n
254
ALA
299
A
PRO
300
n
255
PRO
300
A
ASN
301
n
256
ASN
301
A
GLY
302
n
257
GLY
302
A
ASP
303
n
258
ASP
303
A
LEU
304
n
259
LEU
304
A
TYR
305
n
260
TYR
305
A
ASN
306
n
261
ASN
306
A
VAL
307
n
262
VAL
307
A
PHE
308
n
263
PHE
308
A
ALA
309
n
264
ALA
309
A
TRP
310
n
265
TRP
310
A
ALA
311
n
266
ALA
311
A
LEU
312
n
267
LEU
312
A
ASP
313
n
268
ASP
313
A
VAL
314
n
269
VAL
314
A
LEU
315
n
270
LEU
315
A
ALA
316
n
271
ALA
316
A
LYS
317
n
272
LYS
317
A
ARG
318
n
273
ARG
318
A
LEU
319
n
274
LEU
319
A
ARG
320
n
275
ARG
320
A
SER
321
n
276
SER
321
A
MET
322
n
277
MET
322
A
HIS
323
n
278
HIS
323
A
VAL
324
n
279
VAL
324
A
PHE
325
n
280
PHE
325
A
ILE
326
n
281
ILE
326
A
LEU
327
n
282
LEU
327
A
ASP
328
n
283
ASP
328
A
TYR
329
n
284
TYR
329
A
ASP
330
n
285
ASP
330
A
GLN
331
n
286
GLN
331
A
SER
332
n
287
SER
332
A
PRO
333
n
288
PRO
333
A
ALA
334
n
289
ALA
334
A
GLY
335
n
290
GLY
335
A
CYS
336
n
291
CYS
336
A
ARG
337
n
292
ARG
337
A
ASP
338
n
293
ASP
338
A
ALA
339
n
294
ALA
339
A
LEU
340
n
295
LEU
340
A
LEU
341
n
296
LEU
341
A
GLN
342
n
297
GLN
342
A
LEU
343
n
298
LEU
343
A
THR
344
n
299
THR
344
A
SER
345
n
300
SER
345
A
GLY
346
n
301
GLY
346
A
MET
347
n
302
MET
347
A
VAL
348
n
303
VAL
348
A
GLN
349
n
304
GLN
349
A
THR
350
n
305
THR
350
A
HIS
351
n
306
HIS
351
A
VAL
352
n
307
VAL
352
A
THR
353
n
308
THR
353
A
THR
354
n
309
THR
354
A
PRO
355
n
310
PRO
355
A
GLY
356
n
311
GLY
356
A
SER
357
n
312
SER
357
A
ILE
358
n
313
ILE
358
A
PRO
359
n
314
PRO
359
A
THR
360
n
315
THR
360
A
ILE
361
n
316
ILE
361
A
CYS
362
n
317
CYS
362
A
ASP
363
n
318
ASP
363
A
LEU
364
n
319
LEU
364
A
ALA
365
n
320
ALA
365
A
ARG
366
n
321
ARG
366
A
THR
367
n
322
THR
367
A
PHE
368
n
323
PHE
368
A
ALA
369
n
324
ALA
369
A
ARG
370
n
325
ARG
370
A
GLU
371
n
326
GLU
371
A
MET
372
n
327
MET
372
A
GLY
373
n
328
GLY
373
A
GLU
374
n
329
GLU
374
A
n
330
375
A
n
331
376
A
MET
46
n
1
MET
46
B
PRO
47
n
2
PRO
47
B
THR
48
n
3
THR
48
B
LEU
49
n
4
LEU
49
B
LEU
50
n
5
LEU
50
B
ARG
51
n
6
ARG
51
B
VAL
52
n
7
VAL
52
B
TYR
53
n
8
TYR
53
B
ILE
54
n
9
ILE
54
B
ASP
55
n
10
ASP
55
B
GLY
56
n
11
GLY
56
B
PRO
57
n
12
PRO
57
B
HIS
58
n
13
HIS
58
B
GLY
59
n
14
GLY
59
B
MET
60
n
15
MET
60
B
GLY
61
n
16
GLY
61
B
LYS
62
n
17
LYS
62
B
THR
63
n
18
THR
63
B
THR
64
n
19
THR
64
B
THR
65
n
20
THR
65
B
THR
66
n
21
THR
66
B
GLN
67
n
22
GLN
67
B
LEU
68
n
23
LEU
68
B
LEU
69
n
24
LEU
69
B
VAL
70
n
25
VAL
70
B
ALA
71
n
26
ALA
71
B
LEU
72
n
27
LEU
72
B
GLY
73
n
28
GLY
73
B
SER
74
n
29
SER
74
B
ARG
75
n
30
ARG
75
B
ASP
76
n
31
ASP
76
B
ASP
77
n
32
ASP
77
B
ILE
78
n
33
ILE
78
B
VAL
79
n
34
VAL
79
B
TYR
80
n
35
TYR
80
B
VAL
81
n
36
VAL
81
B
PRO
82
n
37
PRO
82
B
GLU
83
n
38
GLU
83
B
PRO
84
n
39
PRO
84
B
MET
85
n
40
MET
85
B
THR
86
n
41
THR
86
B
TYR
87
n
42
TYR
87
B
TRP
88
n
43
TRP
88
B
ARG
89
n
44
ARG
89
B
VAL
90
n
45
VAL
90
B
LEU
91
n
46
LEU
91
B
GLY
92
n
47
GLY
92
B
ALA
93
n
48
ALA
93
B
SER
94
n
49
SER
94
B
GLU
95
n
50
GLU
95
B
THR
96
n
51
THR
96
B
ILE
97
n
52
ILE
97
B
ALA
98
n
53
ALA
98
B
ASN
99
n
54
ASN
99
B
ILE
100
n
55
ILE
100
B
PHE
101
n
56
PHE
101
B
THR
102
n
57
THR
102
B
THR
103
n
58
THR
103
B
GLN
104
n
59
GLN
104
B
HIS
105
n
60
HIS
105
B
ARG
106
n
61
ARG
106
B
LEU
107
n
62
LEU
107
B
ASP
108
n
63
ASP
108
B
GLN
109
n
64
GLN
109
B
GLY
110
n
65
GLY
110
B
GLU
111
n
66
GLU
111
B
ILE
112
n
67
ILE
112
B
SER
113
n
68
SER
113
B
ALA
114
n
69
ALA
114
B
GLY
115
n
70
GLY
115
B
ASP
116
n
71
ASP
116
B
ALA
117
n
72
ALA
117
B
ALA
118
n
73
ALA
118
B
VAL
119
n
74
VAL
119
B
VAL
120
n
75
VAL
120
B
MET
121
n
76
MET
121
B
THR
122
n
77
THR
122
B
SER
123
n
78
SER
123
B
ALA
124
n
79
ALA
124
B
GLN
125
n
80
GLN
125
B
ILE
126
n
81
ILE
126
B
THR
127
n
82
THR
127
B
MET
128
n
83
MET
128
B
GLY
129
n
84
GLY
129
B
MET
130
n
85
MET
130
B
PRO
131
n
86
PRO
131
B
TYR
132
n
87
TYR
132
B
ALA
133
n
88
ALA
133
B
VAL
134
n
89
VAL
134
B
THR
135
n
90
THR
135
B
ASP
136
n
91
ASP
136
B
ALA
137
n
92
ALA
137
B
VAL
138
n
93
VAL
138
B
LEU
139
n
94
LEU
139
B
ALA
140
n
95
ALA
140
B
PRO
141
n
96
PRO
141
B
HIS
142
n
97
HIS
142
B
ILE
143
n
98
ILE
143
B
GLY
144
n
99
GLY
144
B
GLY
145
n
100
GLY
145
B
GLU
146
n
101
GLU
146
B
ALA
147
n
102
ALA
147
B
GLY
148
n
103
GLY
148
B
SER
149
n
104
SER
149
B
n
105
150
B
n
106
151
B
n
107
152
B
n
108
153
B
PRO
154
n
109
PRO
154
B
PRO
155
n
110
PRO
155
B
ALA
156
n
111
ALA
156
B
LEU
157
n
112
LEU
157
B
THR
158
n
113
THR
158
B
LEU
159
n
114
LEU
159
B
ILE
160
n
115
ILE
160
B
PHE
161
n
116
PHE
161
B
ASP
162
n
117
ASP
162
B
ARG
163
n
118
ARG
163
B
HIS
164
n
119
HIS
164
B
PRO
165
n
120
PRO
165
B
ILE
166
n
121
ILE
166
B
ALA
167
n
122
ALA
167
B
ALA
168
n
123
ALA
168
B
LEU
169
n
124
LEU
169
B
LEU
170
n
125
LEU
170
B
CYS
171
n
126
CYS
171
B
TYR
172
n
127
TYR
172
B
PRO
173
n
128
PRO
173
B
ALA
174
n
129
ALA
174
B
ALA
175
n
130
ALA
175
B
ARG
176
n
131
ARG
176
B
TYR
177
n
132
TYR
177
B
LEU
178
n
133
LEU
178
B
MET
179
n
134
MET
179
B
GLY
180
n
135
GLY
180
B
SER
181
n
136
SER
181
B
MET
182
n
137
MET
182
B
THR
183
n
138
THR
183
B
PRO
184
n
139
PRO
184
B
GLN
185
n
140
GLN
185
B
ALA
186
n
141
ALA
186
B
VAL
187
n
142
VAL
187
B
LEU
188
n
143
LEU
188
B
ALA
189
n
144
ALA
189
B
PHE
190
n
145
PHE
190
B
VAL
191
n
146
VAL
191
B
ALA
192
n
147
ALA
192
B
LEU
193
n
148
LEU
193
B
ILE
194
n
149
ILE
194
B
PRO
195
n
150
PRO
195
B
PRO
196
n
151
PRO
196
B
THR
197
n
152
THR
197
B
LEU
198
n
153
LEU
198
B
PRO
199
n
154
PRO
199
B
GLY
200
n
155
GLY
200
B
THR
201
n
156
THR
201
B
ASN
202
n
157
ASN
202
B
ILE
203
n
158
ILE
203
B
VAL
204
n
159
VAL
204
B
LEU
205
n
160
LEU
205
B
GLY
206
n
161
GLY
206
B
ALA
207
n
162
ALA
207
B
LEU
208
n
163
LEU
208
B
PRO
209
n
164
PRO
209
B
GLU
210
n
165
GLU
210
B
ASP
211
n
166
ASP
211
B
ARG
212
n
167
ARG
212
B
HIS
213
n
168
HIS
213
B
ILE
214
n
169
ILE
214
B
ASP
215
n
170
ASP
215
B
ARG
216
n
171
ARG
216
B
LEU
217
n
172
LEU
217
B
ALA
218
n
173
ALA
218
B
LYS
219
n
174
LYS
219
B
n
175
220
B
n
176
221
B
n
177
222
B
n
178
223
B
n
179
224
B
n
180
225
B
ARG
226
n
181
ARG
226
B
LEU
227
n
182
LEU
227
B
ASP
228
n
183
ASP
228
B
LEU
229
n
184
LEU
229
B
ALA
230
n
185
ALA
230
B
MET
231
n
186
MET
231
B
LEU
232
n
187
LEU
232
B
ALA
233
n
188
ALA
233
B
ALA
234
n
189
ALA
234
B
ILE
235
n
190
ILE
235
B
ARG
236
n
191
ARG
236
B
ARG
237
n
192
ARG
237
B
VAL
238
n
193
VAL
238
B
TYR
239
n
194
TYR
239
B
GLY
240
n
195
GLY
240
B
LEU
241
n
196
LEU
241
B
LEU
242
n
197
LEU
242
B
ALA
243
n
198
ALA
243
B
ASN
244
n
199
ASN
244
B
THR
245
n
200
THR
245
B
VAL
246
n
201
VAL
246
B
ARG
247
n
202
ARG
247
B
TYR
248
n
203
TYR
248
B
LEU
249
n
204
LEU
249
B
GLN
250
n
205
GLN
250
B
CYS
251
n
206
CYS
251
B
GLY
252
n
207
GLY
252
B
GLY
253
n
208
GLY
253
B
SER
254
n
209
SER
254
B
TRP
255
n
210
TRP
255
B
ARG
256
n
211
ARG
256
B
GLU
257
n
212
GLU
257
B
ASP
258
n
213
ASP
258
B
TRP
259
n
214
TRP
259
B
GLY
260
n
215
GLY
260
B
GLN
261
n
216
GLN
261
B
LEU
262
n
217
LEU
262
B
SER
263
n
218
SER
263
B
GLY
264
n
219
GLY
264
B
n
220
265
B
n
221
266
B
n
222
267
B
n
223
268
B
n
224
269
B
n
225
270
B
n
226
271
B
n
227
272
B
n
228
273
B
PRO
274
n
229
PRO
274
B
GLN
275
n
230
GLN
275
B
SER
276
n
231
SER
276
B
ASN
277
n
232
ASN
277
B
ALA
278
n
233
ALA
278
B
GLY
279
n
234
GLY
279
B
PRO
280
n
235
PRO
280
B
ARG
281
n
236
ARG
281
B
PRO
282
n
237
PRO
282
B
HIS
283
n
238
HIS
283
B
ILE
284
n
239
ILE
284
B
GLY
285
n
240
GLY
285
B
ASP
286
n
241
ASP
286
B
THR
287
n
242
THR
287
B
LEU
288
n
243
LEU
288
B
PHE
289
n
244
PHE
289
B
THR
290
n
245
THR
290
B
LEU
291
n
246
LEU
291
B
PHE
292
n
247
PHE
292
B
ARG
293
n
248
ARG
293
B
ALA
294
n
249
ALA
294
B
PRO
295
n
250
PRO
295
B
GLU
296
n
251
GLU
296
B
LEU
297
n
252
LEU
297
B
LEU
298
n
253
LEU
298
B
ALA
299
n
254
ALA
299
B
PRO
300
n
255
PRO
300
B
ASN
301
n
256
ASN
301
B
GLY
302
n
257
GLY
302
B
ASP
303
n
258
ASP
303
B
LEU
304
n
259
LEU
304
B
TYR
305
n
260
TYR
305
B
ASN
306
n
261
ASN
306
B
VAL
307
n
262
VAL
307
B
PHE
308
n
263
PHE
308
B
ALA
309
n
264
ALA
309
B
TRP
310
n
265
TRP
310
B
ALA
311
n
266
ALA
311
B
LEU
312
n
267
LEU
312
B
ASP
313
n
268
ASP
313
B
VAL
314
n
269
VAL
314
B
LEU
315
n
270
LEU
315
B
ALA
316
n
271
ALA
316
B
LYS
317
n
272
LYS
317
B
ARG
318
n
273
ARG
318
B
LEU
319
n
274
LEU
319
B
ARG
320
n
275
ARG
320
B
SER
321
n
276
SER
321
B
MET
322
n
277
MET
322
B
HIS
323
n
278
HIS
323
B
VAL
324
n
279
VAL
324
B
PHE
325
n
280
PHE
325
B
ILE
326
n
281
ILE
326
B
LEU
327
n
282
LEU
327
B
ASP
328
n
283
ASP
328
B
TYR
329
n
284
TYR
329
B
ASP
330
n
285
ASP
330
B
GLN
331
n
286
GLN
331
B
SER
332
n
287
SER
332
B
PRO
333
n
288
PRO
333
B
ALA
334
n
289
ALA
334
B
GLY
335
n
290
GLY
335
B
CYS
336
n
291
CYS
336
B
ARG
337
n
292
ARG
337
B
ASP
338
n
293
ASP
338
B
ALA
339
n
294
ALA
339
B
LEU
340
n
295
LEU
340
B
LEU
341
n
296
LEU
341
B
GLN
342
n
297
GLN
342
B
LEU
343
n
298
LEU
343
B
THR
344
n
299
THR
344
B
SER
345
n
300
SER
345
B
GLY
346
n
301
GLY
346
B
MET
347
n
302
MET
347
B
VAL
348
n
303
VAL
348
B
GLN
349
n
304
GLN
349
B
THR
350
n
305
THR
350
B
HIS
351
n
306
HIS
351
B
VAL
352
n
307
VAL
352
B
THR
353
n
308
THR
353
B
THR
354
n
309
THR
354
B
PRO
355
n
310
PRO
355
B
GLY
356
n
311
GLY
356
B
SER
357
n
312
SER
357
B
ILE
358
n
313
ILE
358
B
PRO
359
n
314
PRO
359
B
THR
360
n
315
THR
360
B
ILE
361
n
316
ILE
361
B
CYS
362
n
317
CYS
362
B
ASP
363
n
318
ASP
363
B
LEU
364
n
319
LEU
364
B
ALA
365
n
320
ALA
365
B
ARG
366
n
321
ARG
366
B
THR
367
n
322
THR
367
B
PHE
368
n
323
PHE
368
B
ALA
369
n
324
ALA
369
B
ARG
370
n
325
ARG
370
B
GLU
371
n
326
GLU
371
B
MET
372
n
327
MET
372
B
GLY
373
n
328
GLY
373
B
GLU
374
n
329
GLU
374
B
n
330
375
B
n
331
376
B
author_and_software_defined_assembly
PQS
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
350
A
O
THR
305
A
N
LEU
49
A
N
LEU
4
A
O
LEU
50
A
O
LEU
5
A
N
LEU
157
A
N
LEU
112
A
O
THR
158
A
O
THR
113
A
N
VAL
79
A
N
VAL
34
A
O
TYR
53
A
O
TYR
8
A
N
ASN
202
A
N
ASN
157
A
O
ILE
203
A
O
ILE
158
A
N
HIS
323
A
N
HIS
278
B
O
THR
350
B
O
THR
305
B
N
LEU
49
B
N
LEU
4
B
O
LEU
50
B
O
LEU
5
B
N
LEU
157
B
N
LEU
112
B
O
THR
158
B
O
THR
113
B
N
VAL
79
B
N
VAL
34
B
O
TYR
53
B
O
TYR
8
B
N
ASN
202
B
N
ASN
157
B
O
ILE
203
B
O
ILE
158
B
N
HIS
323
B
N
HIS
278
1
A
VAL
70
A
VAL
25
1
Y
1
A
ALA
71
A
ALA
26
1
Y
1
A
LEU
72
A
LEU
27
1
Y
1
A
GLY
73
A
GLY
28
1
Y
1
A
SER
74
A
SER
29
1
Y
1
A
ARG
75
A
ARG
30
1
Y
1
A
ASP
76
A
ASP
31
1
Y
1
A
SER
150
A
SER
105
1
Y
1
A
HIS
151
A
HIS
106
1
Y
1
A
ALA
152
A
ALA
107
1
Y
1
A
THR
265
A
THR
220
1
Y
1
A
ALA
266
A
ALA
221
1
Y
1
A
VAL
267
A
VAL
222
1
Y
1
A
PRO
268
A
PRO
223
1
Y
1
A
PRO
269
A
PRO
224
1
Y
1
A
GLN
270
A
GLN
225
1
Y
1
A
GLY
271
A
GLY
226
1
Y
1
A
ALA
272
A
ALA
227
1
Y
1
A
GLU
273
A
GLU
228
1
Y
1
A
PRO
274
A
PRO
229
1
Y
1
A
GLN
275
A
GLN
230
1
Y
1
A
SER
276
A
SER
231
1
Y
1
A
ASN
277
A
ASN
232
1
Y
1
A
ALA
278
A
ALA
233
1
Y
1
A
GLY
279
A
GLY
234
1
Y
1
A
ALA
375
A
ALA
330
1
Y
1
A
ASN
376
A
ASN
331
1
Y
1
B
SER
150
B
SER
105
1
Y
1
B
HIS
151
B
HIS
106
1
Y
1
B
ALA
152
B
ALA
107
1
Y
1
B
PRO
153
B
PRO
108
1
Y
1
B
ARG
220
B
ARG
175
1
Y
1
B
GLN
221
B
GLN
176
1
Y
1
B
ARG
222
B
ARG
177
1
Y
1
B
PRO
223
B
PRO
178
1
Y
1
B
GLY
224
B
GLY
179
1
Y
1
B
GLU
225
B
GLU
180
1
Y
1
B
THR
265
B
THR
220
1
Y
1
B
ALA
266
B
ALA
221
1
Y
1
B
VAL
267
B
VAL
222
1
Y
1
B
PRO
268
B
PRO
223
1
Y
1
B
PRO
269
B
PRO
224
1
Y
1
B
GLN
270
B
GLN
225
1
Y
1
B
GLY
271
B
GLY
226
1
Y
1
B
ALA
272
B
ALA
227
1
Y
1
B
GLU
273
B
GLU
228
1
Y
1
B
ALA
375
B
ALA
330
1
Y
1
B
ASN
376
B
ASN
331
1
Y
1
11.76
1.70
113.30
125.06
A
A
A
CA
CB
CG
MET
MET
MET
46
46
46
N
1
3.24
0.50
120.30
123.54
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
176
176
176
N
1
8.93
1.40
123.60
132.53
A
A
A
CD
NE
CZ
ARG
ARG
ARG
222
222
222
N
1
13.95
1.40
123.60
137.55
A
A
A
CD
NE
CZ
ARG
ARG
ARG
237
237
237
N
1
9.30
1.40
123.60
132.90
A
A
A
CD
NE
CZ
ARG
ARG
ARG
293
293
293
N
1
6.26
0.50
120.30
126.56
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
320
320
320
N
1
-7.98
0.50
120.30
112.32
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
320
320
320
N
1
10.69
1.40
123.60
134.29
A
A
A
CD
NE
CZ
ARG
ARG
ARG
370
370
370
N
1
3.97
0.60
121.00
124.97
B
B
B
CB
CG
CD2
TYR
TYR
TYR
87
87
87
N
1
-3.86
0.60
121.00
117.14
B
B
B
CB
CG
CD1
TYR
TYR
TYR
87
87
87
N
1
11.55
1.70
113.30
124.85
B
B
B
CA
CB
CG
MET
MET
MET
130
130
130
N
1
4.07
0.60
121.00
125.07
B
B
B
CB
CG
CD1
TYR
TYR
TYR
132
132
132
N
1
12.02
1.40
123.60
135.62
B
B
B
CD
NE
CZ
ARG
ARG
ARG
237
237
237
N
1
4.17
0.50
120.30
124.47
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
237
237
237
N
1
3.65
0.50
120.30
123.95
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
318
318
318
N
1
10.70
1.40
123.60
134.30
B
B
B
CD
NE
CZ
ARG
ARG
ARG
370
370
370
N
1
A
ASP
55
-143.82
-153.08
1
A
VAL
90
-134.07
-60.79
1
A
GLU
95
41.65
72.14
1
A
ARG
163
81.02
162.06
1
A
LEU
208
-170.79
127.43
1
A
ARG
320
-26.23
-48.57
1
A
GLN
331
178.63
167.64
1
B
VAL
90
-130.62
-55.21
1
B
ALA
93
-176.76
-177.41
1
B
ALA
147
-78.07
-93.78
1
B
ARG
163
79.23
161.36
1
B
LEU
170
-157.28
-58.03
1
B
PRO
209
-39.69
132.49
1
B
LEU
227
63.87
81.74
1
B
SER
263
162.14
155.33
1
B
PRO
300
-76.08
29.86
38.4
0.280
0.210
2.4
20
1396
27908
5.0
97
4.5
0.11
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
0.34
0.27
1VTK
2.4
20
150
4880
46
0
4684
0.012
0.025
41.5
2.400
20.000
1E2L
27908
0.08400
0.08400
1
11.0000
3.400
97.0
0.50000
2.40
2.50
3.100
0.50000
1
3.30
96.0
refinement
REFMAC
data reduction
MOSFLM
data scaling
SCALA
phasing
AMoRE
Kinetics and crystal structure of the wild-type and the engineered Y101F mutant of Herpes simplex virus type 1 thymidine kinase interacting with (North)-methanocarba-thymidine
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
THE STRONG CRYSTAL PACKING GENERATED USING X
, 1-Y, -Z GIVESCHAIN A TO CHAIN A (SYMMETRY
RELATED) CONTACTS.
A
GLY
61
A
GLY
16
HELX_P
A
LEU
69
A
LEU
24
1
1
9
A
PRO
84
A
PRO
39
HELX_P
A
VAL
90
A
VAL
45
1
2
7
A
GLU
95
A
GLU
50
HELX_P
A
GLN
109
A
GLN
64
1
3
15
A
SER
113
A
SER
68
HELX_P
A
ALA
140
A
ALA
95
1
4
28
A
HIS
164
A
HIS
119
HELX_P
A
LEU
170
A
LEU
125
1
5
7
A
LEU
170
A
LEU
125
HELX_P
A
MET
179
A
MET
134
1
6
10
A
THR
183
A
THR
138
HELX_P
A
LEU
193
A
LEU
148
1
7
11
A
PRO
209
A
PRO
164
HELX_P
A
ARG
220
A
ARG
175
1
8
12
A
ASP
228
A
ASP
183
HELX_P
A
CYS
251
A
CYS
206
1
9
24
A
SER
254
A
SER
209
HELX_P
A
TRP
259
A
TRP
214
1
10
6
A
GLY
260
A
GLY
215
HELX_P
A
GLY
264
A
GLY
219
5
11
5
A
HIS
283
A
HIS
238
HELX_P
A
THR
287
A
THR
242
5
12
5
A
THR
287
A
THR
242
HELX_P
A
ALA
294
A
ALA
249
5
13
8
A
ALA
294
A
ALA
249
HELX_P
A
LEU
297
A
LEU
252
5
14
4
A
TYR
305
A
TYR
260
HELX_P
A
SER
321
A
SER
276
1
15
17
A
SER
332
A
SER
287
HELX_P
A
THR
344
A
THR
299
1
16
13
A
SER
345
A
SER
300
HELX_P
A
MET
347
A
MET
302
5
17
3
A
GLY
356
A
GLY
311
HELX_P
A
GLY
373
A
GLY
328
1
18
18
B
GLY
61
B
GLY
16
HELX_P
B
GLY
73
B
GLY
28
1
19
13
B
PRO
84
B
PRO
39
HELX_P
B
VAL
90
B
VAL
45
1
20
7
B
GLU
95
B
GLU
50
HELX_P
B
GLY
110
B
GLY
65
1
21
16
B
SER
113
B
SER
68
HELX_P
B
ALA
140
B
ALA
95
1
22
28
B
HIS
164
B
HIS
119
HELX_P
B
LEU
170
B
LEU
125
1
23
7
B
LEU
170
B
LEU
125
HELX_P
B
MET
179
B
MET
134
1
24
10
B
THR
183
B
THR
138
HELX_P
B
ILE
194
B
ILE
149
1
25
12
B
PRO
209
B
PRO
164
HELX_P
B
ALA
218
B
ALA
173
1
26
10
B
ASP
228
B
ASP
183
HELX_P
B
CYS
251
B
CYS
206
1
27
24
B
SER
254
B
SER
209
HELX_P
B
TRP
259
B
TRP
214
1
28
6
B
GLY
260
B
GLY
215
HELX_P
B
LEU
262
B
LEU
217
5
29
3
B
HIS
283
B
HIS
238
HELX_P
B
THR
287
B
THR
242
5
30
5
B
THR
287
B
THR
242
HELX_P
B
ARG
293
B
ARG
248
5
31
7
B
ALA
294
B
ALA
249
HELX_P
B
LEU
297
B
LEU
252
5
32
4
B
TYR
305
B
TYR
260
HELX_P
B
SER
321
B
SER
276
1
33
17
B
SER
332
B
SER
287
HELX_P
B
SER
345
B
SER
300
1
34
14
B
GLY
356
B
GLY
311
HELX_P
B
GLY
373
B
GLY
328
1
35
18
THYMIDINE KINASE
THYMIDINE KINASE, ANTIVIRAL DRUG, ENZYME-PRODRUG GENE THERAPY, SUGAR RING PUCKER
given
-0.917390
-0.342840
-0.202150
-0.337350
0.400340
0.852010
-0.211170
0.849820
-0.482920
75.40794
24.21157
-9.70350
KITH_HSV11
UNP
1
P03176
46
376
1E2L
46
376
P03176
A
1
1
331
46
376
1E2L
46
376
P03176
B
1
1
331
1
TYR
engineered mutation
PHE
101
1E2L
A
P03176
UNP
101
56
2
TYR
engineered mutation
PHE
101
1E2L
B
P03176
UNP
101
56
4
3
4
3
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
A
GLN
349
A
GLN
304
A
HIS
351
A
HIS
306
A
THR
48
A
THR
3
A
ILE
54
A
ILE
9
A
LEU
157
A
LEU
112
A
ASP
162
A
ASP
117
A
ILE
78
A
ILE
33
A
VAL
81
A
VAL
36
A
VAL
52
A
VAL
7
A
ILE
54
A
ILE
9
A
ASN
202
A
ASN
157
A
ALA
207
A
ALA
162
A
HIS
323
A
HIS
278
A
ASP
328
A
ASP
283
B
GLN
349
B
GLN
304
B
HIS
351
B
HIS
306
B
THR
48
B
THR
3
B
ILE
54
B
ILE
9
B
LEU
157
B
LEU
112
B
ASP
162
B
ASP
117
B
ILE
78
B
ILE
33
B
VAL
81
B
VAL
36
B
VAL
52
B
VAL
7
B
ILE
54
B
ILE
9
B
ASN
202
B
ASN
157
B
ALA
207
B
ALA
162
B
HIS
323
B
HIS
278
B
ASP
328
B
ASP
283
BINDING SITE FOR RESIDUE SO4 A 400
A
SO4
400
Software
7
BINDING SITE FOR RESIDUE SO4 B 400
B
SO4
400
Software
7
BINDING SITE FOR RESIDUE TMC A 500
A
TMC
500
Software
11
BINDING SITE FOR RESIDUE TMC B 500
B
TMC
500
Software
13
A
HIS
58
A
HIS
13
7
1_555
A
GLY
59
A
GLY
14
7
1_555
A
MET
60
A
MET
15
7
1_555
A
LYS
62
A
LYS
17
7
1_555
A
THR
63
A
THR
18
7
1_555
A
ARG
220
A
ARG
175
7
1_555
A
ARG
222
A
ARG
177
7
1_555
B
HIS
58
B
HIS
13
7
1_555
B
GLY
59
B
GLY
14
7
1_555
B
MET
60
B
MET
15
7
1_555
B
GLY
61
B
GLY
16
7
1_555
B
LYS
62
B
LYS
17
7
1_555
B
THR
63
B
THR
18
7
1_555
B
HOH
2004
H
HOH
7
1_555
A
HIS
58
A
HIS
13
11
1_555
A
GLU
83
A
GLU
38
11
1_555
A
ILE
97
A
ILE
52
11
1_555
A
GLN
125
A
GLN
80
11
1_555
A
MET
128
A
MET
83
11
1_555
A
TYR
132
A
TYR
87
11
1_555
A
ARG
163
A
ARG
118
11
1_555
A
ALA
168
A
ALA
123
11
1_555
A
TYR
172
A
TYR
127
11
1_555
A
ARG
222
A
ARG
177
11
1_555
A
HOH
2077
G
HOH
11
1_555
B
HIS
58
B
HIS
13
13
1_555
B
GLU
83
B
GLU
38
13
1_555
B
ILE
97
B
ILE
52
13
1_555
B
ILE
100
B
ILE
55
13
1_555
B
GLN
125
B
GLN
80
13
1_555
B
MET
128
B
MET
83
13
1_555
B
TYR
132
B
TYR
87
13
1_555
B
ARG
163
B
ARG
118
13
1_555
B
ALA
168
B
ALA
123
13
1_555
B
TYR
172
B
TYR
127
13
1_555
B
HOH
2004
H
HOH
13
1_555
B
HOH
2072
H
HOH
13
1_555
B
HOH
2073
H
HOH
13
1_555
20
C 2 2 21