0.010718
0.000000
0.008254
0.000000
0.019084
0.000000
0.000000
0.000000
0.018292
0.00000
0.00000
0.00000
Remenyi, A.
Tomilin, A.
Pohl, E.
Schoeler, H.
Wilmanns, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
127.60
90.00
93.300
52.400
69.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
S
C
N
288
N
C
N
289
N
C
N
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
N
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
N
C
N
357
N
C
N
358
N
S
N
359
N
C
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
N
383
N
O
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
N
C
N
400
N
C
N
401
N
C
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
N
417
N
O
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
N
N
427
S
C
N
428
N
C
N
429
N
O
N
430
R
C
N
431
N
O
N
432
N
C
N
433
N
O
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
N
Y
452
N
C
Y
453
N
C
Y
454
N
C
Y
455
N
C
Y
456
N
C
N
457
N
O
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
N
N
471
S
C
N
472
N
C
N
473
N
O
N
474
N
C
Y
475
N
C
Y
476
N
C
Y
477
N
C
Y
478
N
C
Y
479
N
C
Y
480
N
C
N
481
N
O
N
482
N
O
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
N
N
495
S
C
N
496
N
C
N
497
N
O
N
498
N
C
N
499
N
C
N
500
N
C
N
501
N
O
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
doub
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
Y
376
N
doub
Y
377
N
sing
Y
378
N
sing
N
379
N
sing
Y
380
N
doub
N
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
doub
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
Y
445
N
doub
Y
446
N
sing
Y
447
N
sing
N
448
N
sing
Y
449
N
doub
Y
450
N
sing
Y
451
N
sing
N
452
N
sing
Y
453
N
sing
Y
454
N
doub
N
455
N
sing
Y
456
N
doub
N
457
N
sing
Y
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
doub
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
Y
473
N
doub
Y
474
N
sing
Y
475
N
sing
N
476
N
sing
Y
477
N
doub
N
478
N
sing
Y
479
N
doub
N
480
N
sing
Y
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
doub
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
US
Mol.Cell
MOCEFL
2168
1097-2765
8
569
10.1016/S1097-2765(01)00336-7
11583619
Differential Dimer Activities of the Transcription Factor Oct-1 by DNA-Induced Interface Swapping
2001
10.2210/pdb1e3o/pdb
pdb_00001e3o
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
IMAGE PLATE
1999-11-15
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.8424
1.0
BW7A
EMBL/DESY, HAMBURG
0.8424
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE BW7A
3422.260
5'-D(*AP*TP*GP*CP*AP*TP*GP*AP*GP*GP*A)-3'
1
syn
polymer
3284.160
5'-D(*TP*CP*CP*TP*CP*AP*TP*GP*CP*AP*T)-3'
1
syn
polymer
18398.877
OCTAMER-BINDING TRANSCRIPTION FACTOR 1
DNA-BINDING DOMAIN
YES
1
man
polymer
18.015
water
138
nat
water
no
no
(DA)(DT)(DG)(DC)(DA)(DT)(DG)(DA)(DG)(DG)(DA)
ATGCATGAGGA
A
polydeoxyribonucleotide
no
no
(DT)(DC)(DC)(DT)(DC)(DA)(DT)(DG)(DC)(DA)(DT)
TCCTCATGCAT
B
polydeoxyribonucleotide
no
no
EEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMSKLKPLLEKWLNDAEANLSS
DSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKRIN
EEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMSKLKPLLEKWLNDAEANLSS
DSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKRIN
C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
THE PROTEIN WAS EXPRESSED IN E.COLI BY RECOMBINANT DNA TECHNOLOGY
NUCLEUS
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
PLASMID
PET-9D
1
2.66
53.78
7.00
22% PEG3350, 50MM HEPES, PH 7.0, 1.8MM SPERMINE
-3.173
1
20
A
201
B
211
5.616
A_DA201:DT211_B
1
-9.074
-0.007
0.018
-0.186
-3.235
1
20
A
202
B
210
1.590
A_DT202:DA210_B
2
-10.543
0.038
0.166
-0.201
-14.309
1
19
A
203
B
209
-3.936
A_DG203:DC209_B
3
-21.908
-0.089
-0.028
-0.255
-10.357
1
19
A
204
B
208
-1.799
A_DC204:DG208_B
4
6.980
0.194
-0.094
-0.193
-4.845
1
20
A
205
B
207
5.424
A_DA205:DT207_B
5
-4.308
-0.084
0.003
-0.166
3.059
1
20
A
206
B
206
-0.053
A_DT206:DA206_B
6
-5.867
-0.055
-0.255
-0.099
5.255
1
19
A
207
B
205
6.119
A_DG207:DC205_B
7
-5.485
0.069
0.024
-0.026
0.456
1
20
A
208
B
204
0.100
A_DA208:DT204_B
8
-12.532
0.461
-0.119
-0.114
0.810
1
19
A
209
B
203
-7.285
A_DG209:DC203_B
9
-11.911
0.454
-0.123
-0.506
-12.319
1
19
A
210
B
202
-1.366
A_DG210:DC202_B
10
-4.072
-0.018
-0.315
-0.336
-6.028
1
20
A
211
B
201
7.815
A_DA211:DT201_B
11
-6.859
0.212
0.301
-0.096
3.226
28.626
A
A
201
202
7.958
B
B
211
210
3.307
3.923
-0.380
-0.447
AA_DA201DT202:DA210DT211_BB
1
-0.792
1.608
28.350
-1.795
0.589
3.645
40.953
A
A
202
203
3.222
B
B
210
209
3.549
2.253
-1.465
0.701
AA_DT202DG203:DC209DA210_BB
2
-1.986
2.841
40.847
0.730
1.854
3.121
41.254
A
A
203
204
-9.358
B
B
209
208
3.308
-6.565
0.883
0.632
AA_DG203DC204:DG208DC209_BB
3
-2.315
3.300
40.688
1.597
-1.500
3.142
29.750
A
A
204
205
5.436
B
B
208
207
3.227
2.787
0.539
-0.943
AA_DC204DA205:DT207DG208_BB
4
0.869
-1.696
29.609
-2.406
-0.873
2.989
28.889
A
A
205
206
4.866
B
B
207
206
3.131
2.422
-0.892
-0.582
AA_DA205DT206:DA206DT207_BB
5
2.432
-4.885
28.689
-1.672
2.295
3.261
33.419
A
A
206
207
11.422
B
B
206
205
3.302
6.523
0.329
0.264
AA_DT206DG207:DC205DA206_BB
6
-2.360
4.132
32.711
-0.635
-0.967
3.421
38.677
A
A
207
208
8.974
B
B
205
204
3.405
5.922
-0.858
0.333
AA_DG207DA208:DT204DC205_BB
7
-0.172
0.260
38.238
-0.260
1.273
3.144
34.670
A
A
208
209
15.680
B
B
204
203
3.325
9.235
-0.061
-0.263
AA_DA208DG209:DC203DT204_BB
8
-1.530
2.597
33.420
-1.871
-0.135
3.644
34.195
A
A
209
210
5.851
B
B
203
202
3.653
3.429
0.633
-0.387
AA_DG209DG210:DC202DC203_BB
9
3.652
-6.231
33.837
-1.266
-0.429
3.077
37.797
A
A
210
211
0.330
B
B
202
201
3.083
0.213
-0.205
-0.677
AA_DG210DA211:DT201DC202_BB
10
-5.680
8.799
37.383
-1.071
-0.376
entity_src_gen
pdbx_entity_src_syn
diffrn_source
pdbx_struct_special_symmetry
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Database references
Derived calculations
Non-polymer description
Other
Refinement description
Source and taxonomy
Structure summary
Version format compliance
Source and taxonomy
Data collection
Derived calculations
Data collection
Database references
Refinement description
1
0
2001-11-10
1
1
2012-11-14
1
2
2018-03-07
1
3
2019-07-24
1
4
2023-12-13
_entity_src_gen.gene_src_common_name
_entity_src_gen.pdbx_gene_src_scientific_name
_entity_src_gen.pdbx_host_org_scientific_name
_entity_src_gen.pdbx_host_org_strain
_diffrn_source.pdbx_synchrotron_site
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
CRYSTAL STRUCTURE OF A TERNARY COMPLEX CONTAINING AN OCA-B PEPTIDE, THE OCT-1 POU DOMAIN, AND AN OCTAMER ELEMENT
OCT-1 (POU DOMAIN)
PDBE
Y
PDBE
2000-06-20
REL
1
C
O
HOH
2082
6.05
HOH
water
9606
Human
Homo sapiens
sample
9606
Human
Homo sapiens
sample
CHAIN C ENGINEERED MUTATION CYS61SER CYS150SER
1OCT
PDB
experimental model
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2001
4
HOH
HOH
2001
B
HOH
2002
4
HOH
HOH
2002
B
HOH
2003
4
HOH
HOH
2003
B
HOH
2004
4
HOH
HOH
2004
B
HOH
2005
4
HOH
HOH
2005
B
HOH
2006
4
HOH
HOH
2006
B
HOH
2007
4
HOH
HOH
2007
B
HOH
2008
4
HOH
HOH
2008
B
HOH
2009
4
HOH
HOH
2009
B
HOH
2010
4
HOH
HOH
2010
B
HOH
2011
4
HOH
HOH
2011
B
HOH
2012
4
HOH
HOH
2012
B
HOH
2013
4
HOH
HOH
2013
B
HOH
2014
4
HOH
HOH
2014
B
HOH
2015
4
HOH
HOH
2015
B
HOH
2016
4
HOH
HOH
2016
B
HOH
2017
4
HOH
HOH
2017
B
HOH
2018
4
HOH
HOH
2018
B
HOH
2019
4
HOH
HOH
2019
B
HOH
2020
4
HOH
HOH
2020
B
HOH
2021
4
HOH
HOH
2021
B
HOH
2022
4
HOH
HOH
2022
B
HOH
2023
4
HOH
HOH
2023
B
HOH
2024
4
HOH
HOH
2024
B
HOH
2025
4
HOH
HOH
2025
B
HOH
2026
4
HOH
HOH
2026
B
HOH
2027
4
HOH
HOH
2027
B
HOH
2028
4
HOH
HOH
2028
B
HOH
2029
4
HOH
HOH
2029
B
HOH
2030
4
HOH
HOH
2030
B
HOH
2031
4
HOH
HOH
2031
B
HOH
2032
4
HOH
HOH
2032
B
HOH
2033
4
HOH
HOH
2033
B
HOH
2001
4
HOH
HOH
2001
C
HOH
2002
4
HOH
HOH
2002
C
HOH
2003
4
HOH
HOH
2003
C
HOH
2004
4
HOH
HOH
2004
C
HOH
2005
4
HOH
HOH
2005
C
HOH
2006
4
HOH
HOH
2006
C
HOH
2007
4
HOH
HOH
2007
C
HOH
2008
4
HOH
HOH
2008
C
HOH
2009
4
HOH
HOH
2009
C
HOH
2010
4
HOH
HOH
2010
C
HOH
2011
4
HOH
HOH
2011
C
HOH
2012
4
HOH
HOH
2012
C
HOH
2013
4
HOH
HOH
2013
C
HOH
2014
4
HOH
HOH
2014
C
HOH
2015
4
HOH
HOH
2015
C
HOH
2016
4
HOH
HOH
2016
C
HOH
2017
4
HOH
HOH
2017
C
HOH
2018
4
HOH
HOH
2018
C
HOH
2019
4
HOH
HOH
2019
C
HOH
2020
4
HOH
HOH
2020
C
HOH
2021
4
HOH
HOH
2021
C
HOH
2022
4
HOH
HOH
2022
C
HOH
2023
4
HOH
HOH
2023
C
HOH
2024
4
HOH
HOH
2024
C
HOH
2025
4
HOH
HOH
2025
C
HOH
2026
4
HOH
HOH
2026
C
HOH
2027
4
HOH
HOH
2027
C
HOH
2028
4
HOH
HOH
2028
C
HOH
2029
4
HOH
HOH
2029
C
HOH
2030
4
HOH
HOH
2030
C
HOH
2031
4
HOH
HOH
2031
C
HOH
2032
4
HOH
HOH
2032
C
HOH
2033
4
HOH
HOH
2033
C
HOH
2034
4
HOH
HOH
2034
C
HOH
2035
4
HOH
HOH
2035
C
HOH
2036
4
HOH
HOH
2036
C
HOH
2037
4
HOH
HOH
2037
C
HOH
2038
4
HOH
HOH
2038
C
HOH
2039
4
HOH
HOH
2039
C
HOH
2040
4
HOH
HOH
2040
C
HOH
2041
4
HOH
HOH
2041
C
HOH
2042
4
HOH
HOH
2042
C
HOH
2043
4
HOH
HOH
2043
C
HOH
2044
4
HOH
HOH
2044
C
HOH
2045
4
HOH
HOH
2045
C
HOH
2046
4
HOH
HOH
2046
C
HOH
2047
4
HOH
HOH
2047
C
HOH
2048
4
HOH
HOH
2048
C
HOH
2049
4
HOH
HOH
2049
C
HOH
2050
4
HOH
HOH
2050
C
HOH
2051
4
HOH
HOH
2051
C
HOH
2052
4
HOH
HOH
2052
C
HOH
2053
4
HOH
HOH
2053
C
HOH
2054
4
HOH
HOH
2054
C
HOH
2055
4
HOH
HOH
2055
C
HOH
2056
4
HOH
HOH
2056
C
HOH
2057
4
HOH
HOH
2057
C
HOH
2058
4
HOH
HOH
2058
C
HOH
2059
4
HOH
HOH
2059
C
HOH
2060
4
HOH
HOH
2060
C
HOH
2061
4
HOH
HOH
2061
C
HOH
2062
4
HOH
HOH
2062
C
HOH
2063
4
HOH
HOH
2063
C
HOH
2064
4
HOH
HOH
2064
C
HOH
2065
4
HOH
HOH
2065
C
HOH
2066
4
HOH
HOH
2066
C
HOH
2067
4
HOH
HOH
2067
C
HOH
2068
4
HOH
HOH
2068
C
HOH
2069
4
HOH
HOH
2069
C
HOH
2070
4
HOH
HOH
2070
C
HOH
2071
4
HOH
HOH
2071
C
HOH
2072
4
HOH
HOH
2072
C
HOH
2073
4
HOH
HOH
2073
C
HOH
2074
4
HOH
HOH
2074
C
HOH
2075
4
HOH
HOH
2075
C
HOH
2076
4
HOH
HOH
2076
C
HOH
2077
4
HOH
HOH
2077
C
HOH
2078
4
HOH
HOH
2078
C
HOH
2079
4
HOH
HOH
2079
C
HOH
2080
4
HOH
HOH
2080
C
HOH
2081
4
HOH
HOH
2081
C
HOH
2082
4
HOH
HOH
2082
C
DA
201
n
1
DA
201
A
DT
202
n
2
DT
202
A
DG
203
n
3
DG
203
A
DC
204
n
4
DC
204
A
DA
205
n
5
DA
205
A
DT
206
n
6
DT
206
A
DG
207
n
7
DG
207
A
DA
208
n
8
DA
208
A
DG
209
n
9
DG
209
A
DG
210
n
10
DG
210
A
DA
211
n
11
DA
211
A
DT
201
n
1
DT
201
B
DC
202
n
2
DC
202
B
DC
203
n
3
DC
203
B
DT
204
n
4
DT
204
B
DC
205
n
5
DC
205
B
DA
206
n
6
DA
206
B
DT
207
n
7
DT
207
B
DG
208
n
8
DG
208
B
DC
209
n
9
DC
209
B
DA
210
n
10
DA
210
B
DT
211
n
11
DT
211
B
GLU
1
n
1
GLU
1
C
GLU
2
n
2
GLU
2
C
PRO
3
n
3
PRO
3
C
SER
4
n
4
SER
4
C
ASP
5
n
5
ASP
5
C
LEU
6
n
6
LEU
6
C
GLU
7
n
7
GLU
7
C
GLU
8
n
8
GLU
8
C
LEU
9
n
9
LEU
9
C
GLU
10
n
10
GLU
10
C
GLN
11
n
11
GLN
11
C
PHE
12
n
12
PHE
12
C
ALA
13
n
13
ALA
13
C
LYS
14
n
14
LYS
14
C
THR
15
n
15
THR
15
C
PHE
16
n
16
PHE
16
C
LYS
17
n
17
LYS
17
C
GLN
18
n
18
GLN
18
C
ARG
19
n
19
ARG
19
C
ARG
20
n
20
ARG
20
C
ILE
21
n
21
ILE
21
C
LYS
22
n
22
LYS
22
C
LEU
23
n
23
LEU
23
C
GLY
24
n
24
GLY
24
C
PHE
25
n
25
PHE
25
C
THR
26
n
26
THR
26
C
GLN
27
n
27
GLN
27
C
GLY
28
n
28
GLY
28
C
ASP
29
n
29
ASP
29
C
VAL
30
n
30
VAL
30
C
GLY
31
n
31
GLY
31
C
LEU
32
n
32
LEU
32
C
ALA
33
n
33
ALA
33
C
MET
34
n
34
MET
34
C
GLY
35
n
35
GLY
35
C
LYS
36
n
36
LYS
36
C
LEU
37
n
37
LEU
37
C
TYR
38
n
38
TYR
38
C
GLY
39
n
39
GLY
39
C
ASN
40
n
40
ASN
40
C
ASP
41
n
41
ASP
41
C
PHE
42
n
42
PHE
42
C
SER
43
n
43
SER
43
C
GLN
44
n
44
GLN
44
C
THR
45
n
45
THR
45
C
THR
46
n
46
THR
46
C
ILE
47
n
47
ILE
47
C
SER
48
n
48
SER
48
C
ARG
49
n
49
ARG
49
C
PHE
50
n
50
PHE
50
C
GLU
51
n
51
GLU
51
C
ALA
52
n
52
ALA
52
C
LEU
53
n
53
LEU
53
C
ASN
54
n
54
ASN
54
C
LEU
55
n
55
LEU
55
C
SER
56
n
56
SER
56
C
PHE
57
n
57
PHE
57
C
LYS
58
n
58
LYS
58
C
ASN
59
n
59
ASN
59
C
MET
60
n
60
MET
60
C
SER
61
n
61
SER
61
C
LYS
62
n
62
LYS
62
C
LEU
63
n
63
LEU
63
C
LYS
64
n
64
LYS
64
C
PRO
65
n
65
PRO
65
C
LEU
66
n
66
LEU
66
C
LEU
67
n
67
LEU
67
C
GLU
68
n
68
GLU
68
C
LYS
69
n
69
LYS
69
C
TRP
70
n
70
TRP
70
C
LEU
71
n
71
LEU
71
C
ASN
72
n
72
ASN
72
C
ASP
73
n
73
ASP
73
C
ALA
74
n
74
ALA
74
C
GLU
75
n
75
GLU
75
C
n
76
76
C
n
77
77
C
n
78
78
C
n
79
79
C
n
80
80
C
n
81
81
C
n
82
82
C
n
83
83
C
n
84
84
C
n
85
85
C
n
86
86
C
n
87
87
C
n
88
88
C
n
89
89
C
n
90
90
C
n
91
91
C
n
92
92
C
n
93
93
C
n
94
94
C
n
95
95
C
n
96
96
C
n
97
97
C
n
98
98
C
n
99
99
C
n
100
100
C
n
101
101
C
n
102
102
C
n
103
103
C
LYS
104
n
104
LYS
104
C
ARG
105
n
105
ARG
105
C
THR
106
n
106
THR
106
C
SER
107
n
107
SER
107
C
ILE
108
n
108
ILE
108
C
GLU
109
n
109
GLU
109
C
THR
110
n
110
THR
110
C
ASN
111
n
111
ASN
111
C
ILE
112
n
112
ILE
112
C
ARG
113
n
113
ARG
113
C
VAL
114
n
114
VAL
114
C
ALA
115
n
115
ALA
115
C
LEU
116
n
116
LEU
116
C
GLU
117
n
117
GLU
117
C
LYS
118
n
118
LYS
118
C
SER
119
n
119
SER
119
C
PHE
120
n
120
PHE
120
C
MET
121
n
121
MET
121
C
GLU
122
n
122
GLU
122
C
ASN
123
n
123
ASN
123
C
GLN
124
n
124
GLN
124
C
LYS
125
n
125
LYS
125
C
PRO
126
n
126
PRO
126
C
THR
127
n
127
THR
127
C
SER
128
n
128
SER
128
C
GLU
129
n
129
GLU
129
C
ASP
130
n
130
ASP
130
C
ILE
131
n
131
ILE
131
C
THR
132
n
132
THR
132
C
LEU
133
n
133
LEU
133
C
ILE
134
n
134
ILE
134
C
ALA
135
n
135
ALA
135
C
GLU
136
n
136
GLU
136
C
GLN
137
n
137
GLN
137
C
LEU
138
n
138
LEU
138
C
ASN
139
n
139
ASN
139
C
MET
140
n
140
MET
140
C
GLU
141
n
141
GLU
141
C
LYS
142
n
142
LYS
142
C
GLU
143
n
143
GLU
143
C
VAL
144
n
144
VAL
144
C
ILE
145
n
145
ILE
145
C
ARG
146
n
146
ARG
146
C
VAL
147
n
147
VAL
147
C
TRP
148
n
148
TRP
148
C
PHE
149
n
149
PHE
149
C
SER
150
n
150
SER
150
C
ASN
151
n
151
ASN
151
C
ARG
152
n
152
ARG
152
C
ARG
153
n
153
ARG
153
C
GLN
154
n
154
GLN
154
C
LYS
155
n
155
LYS
155
C
GLU
156
n
156
GLU
156
C
LYS
157
n
157
LYS
157
C
ARG
158
n
158
ARG
158
C
ILE
159
n
159
ILE
159
C
ASN
160
n
160
ASN
160
C
software_defined_assembly
PQS
6
hexameric
12540
-5.9
19660
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
-1.000000
point symmetry operation
46.650000
0.000000
0.000000
1
A
DA
211
A
DA
11
1
A
O5'
DA
201
A
O5'
DA
1
1
Y
1
A
P
DA
211
A
P
DA
11
1
Y
1
A
OP1
DA
211
A
OP1
DA
11
1
Y
1
A
OP2
DA
211
A
OP2
DA
11
1
Y
1
C
CG
GLU
1
C
CG
GLU
1
1
Y
1
C
CD
GLU
1
C
CD
GLU
1
1
Y
1
C
OE1
GLU
1
C
OE1
GLU
1
1
Y
1
C
OE2
GLU
1
C
OE2
GLU
1
1
Y
1
C
CG
LYS
22
C
CG
LYS
22
1
Y
1
C
CD
LYS
22
C
CD
LYS
22
1
Y
1
C
CE
LYS
22
C
CE
LYS
22
1
Y
1
C
NZ
LYS
22
C
NZ
LYS
22
1
Y
1
C
CG
LYS
104
C
CG
LYS
104
1
Y
1
C
CD
LYS
104
C
CD
LYS
104
1
Y
1
C
CE
LYS
104
C
CE
LYS
104
1
Y
1
C
NZ
LYS
104
C
NZ
LYS
104
1
Y
1
C
CG
LYS
118
C
CG
LYS
118
1
Y
1
C
CD
LYS
118
C
CD
LYS
118
1
Y
1
C
CE
LYS
118
C
CE
LYS
118
1
Y
1
C
NZ
LYS
118
C
NZ
LYS
118
1
Y
1
C
CG
MET
121
C
CG
MET
121
1
Y
1
C
SD
MET
121
C
SD
MET
121
1
Y
1
C
CE
MET
121
C
CE
MET
121
1
Y
1
C
CG
LYS
125
C
CG
LYS
125
1
Y
1
C
CD
LYS
125
C
CD
LYS
125
1
Y
1
C
CE
LYS
125
C
CE
LYS
125
1
Y
1
C
NZ
LYS
125
C
NZ
LYS
125
1
Y
1
C
CG
GLU
129
C
CG
GLU
129
1
Y
1
C
CD
GLU
129
C
CD
GLU
129
1
Y
1
C
OE1
GLU
129
C
OE1
GLU
129
1
Y
1
C
OE2
GLU
129
C
OE2
GLU
129
1
Y
1
C
CG
LEU
133
C
CG
LEU
133
1
Y
1
C
CD1
LEU
133
C
CD1
LEU
133
1
Y
1
C
CD2
LEU
133
C
CD2
LEU
133
1
Y
1
C
CG
GLU
136
C
CG
GLU
136
1
Y
1
C
CD
GLU
136
C
CD
GLU
136
1
Y
1
C
OE1
GLU
136
C
OE1
GLU
136
1
Y
1
C
OE2
GLU
136
C
OE2
GLU
136
1
Y
1
C
CG
LYS
142
C
CG
LYS
142
1
Y
1
C
CD
LYS
142
C
CD
LYS
142
1
Y
1
C
CE
LYS
142
C
CE
LYS
142
1
Y
1
C
NZ
LYS
142
C
NZ
LYS
142
1
Y
1
C
ALA
76
C
ALA
76
1
Y
1
C
ASN
77
C
ASN
77
1
Y
1
C
LEU
78
C
LEU
78
1
Y
1
C
SER
79
C
SER
79
1
Y
1
C
SER
80
C
SER
80
1
Y
1
C
ASP
81
C
ASP
81
1
Y
1
C
SER
82
C
SER
82
1
Y
1
C
SER
83
C
SER
83
1
Y
1
C
LEU
84
C
LEU
84
1
Y
1
C
SER
85
C
SER
85
1
Y
1
C
SER
86
C
SER
86
1
Y
1
C
PRO
87
C
PRO
87
1
Y
1
C
SER
88
C
SER
88
1
Y
1
C
ALA
89
C
ALA
89
1
Y
1
C
LEU
90
C
LEU
90
1
Y
1
C
ASN
91
C
ASN
91
1
Y
1
C
SER
92
C
SER
92
1
Y
1
C
PRO
93
C
PRO
93
1
Y
1
C
GLY
94
C
GLY
94
1
Y
1
C
ILE
95
C
ILE
95
1
Y
1
C
GLU
96
C
GLU
96
1
Y
1
C
GLY
97
C
GLY
97
1
Y
1
C
LEU
98
C
LEU
98
1
Y
1
C
SER
99
C
SER
99
1
Y
1
C
ARG
100
C
ARG
100
1
Y
1
C
ARG
101
C
ARG
101
1
Y
1
C
ARG
102
C
ARG
102
1
Y
1
C
LYS
103
C
LYS
103
1
Y
1
13.31
1.10
110.50
123.81
A
A
A
O3'
P
OP2
DA
DT
DT
201
202
202
Y
1
8.05
1.10
110.50
118.55
B
B
B
O3'
P
OP2
DT
DG
DG
207
208
208
Y
1
7.17
1.10
110.50
117.67
B
B
B
O3'
P
OP2
DA
DT
DT
210
211
211
Y
1
14.20
2.30
115.30
129.50
C
C
C
CA
CB
CG
LEU
LEU
LEU
9
9
9
N
THE FOLLOWING AMINO ACID SIDE CHAINS A EXCLUDED FROM THE FINAL MODEL BECAUSE THEY HAVE POORLY DEFINED ELECTRON DENSITY: GLU 1, LYS 22, LYS 118, MET 121, LYS 125, GLU 129, LEU 133, GLU 136, LYS 142
0.242
0.220
0.220
1.9
20
1007
19950
5.0
95.3
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
1OCT
1.9
20
138
1631
0
441
1052
0.013
1.5
36
1.900
20.000
1E3O
91810
2.000
0.03900
1
24.4000
4.600
95.3
0.11100
1.90
1.97
6.200
1
97.0
refinement
CNS
0.9
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
Crystal structure of Oct-1 POU dimer bound to MORE
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
C
ASP
5
C
ASP
5
HELX_P
C
LEU
23
C
LEU
23
1
1
19
C
THR
26
C
THR
26
HELX_P
C
GLY
39
C
GLY
39
1
2
14
C
SER
43
C
SER
43
HELX_P
C
LEU
53
C
LEU
53
1
3
11
C
SER
56
C
SER
56
HELX_P
C
GLU
75
C
GLU
75
1
4
20
C
GLU
109
C
GLU
109
HELX_P
C
ASN
123
C
ASN
123
1
5
15
C
THR
127
C
THR
127
HELX_P
C
ASN
139
C
ASN
139
1
6
13
C
GLU
141
C
GLU
141
HELX_P
C
LYS
157
C
LYS
157
1
7
17
hydrog
WATSON-CRICK
A
DA
201
A
N1
DA
1
1_555
B
DT
211
B
N3
DT
11
1_555
hydrog
WATSON-CRICK
A
DA
201
A
N6
DA
1
1_555
B
DT
211
B
O4
DT
11
1_555
hydrog
WATSON-CRICK
A
DT
202
A
N3
DT
2
1_555
B
DA
210
B
N1
DA
10
1_555
hydrog
WATSON-CRICK
A
DT
202
A
O4
DT
2
1_555
B
DA
210
B
N6
DA
10
1_555
hydrog
WATSON-CRICK
A
DG
203
A
N1
DG
3
1_555
B
DC
209
B
N3
DC
9
1_555
hydrog
WATSON-CRICK
A
DG
203
A
N2
DG
3
1_555
B
DC
209
B
O2
DC
9
1_555
hydrog
WATSON-CRICK
A
DG
203
A
O6
DG
3
1_555
B
DC
209
B
N4
DC
9
1_555
hydrog
WATSON-CRICK
A
DC
204
A
N3
DC
4
1_555
B
DG
208
B
N1
DG
8
1_555
hydrog
WATSON-CRICK
A
DC
204
A
N4
DC
4
1_555
B
DG
208
B
O6
DG
8
1_555
hydrog
WATSON-CRICK
A
DC
204
A
O2
DC
4
1_555
B
DG
208
B
N2
DG
8
1_555
hydrog
WATSON-CRICK
A
DA
205
A
N1
DA
5
1_555
B
DT
207
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
205
A
N6
DA
5
1_555
B
DT
207
B
O4
DT
7
1_555
hydrog
WATSON-CRICK
A
DT
206
A
N3
DT
6
1_555
B
DA
206
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
206
A
O4
DT
6
1_555
B
DA
206
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
A
DG
207
A
N1
DG
7
1_555
B
DC
205
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
207
A
N2
DG
7
1_555
B
DC
205
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
207
A
O6
DG
7
1_555
B
DC
205
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DA
208
A
N1
DA
8
1_555
B
DT
204
B
N3
DT
4
1_555
hydrog
WATSON-CRICK
A
DA
208
A
N6
DA
8
1_555
B
DT
204
B
O4
DT
4
1_555
hydrog
WATSON-CRICK
A
DG
209
A
N1
DG
9
1_555
B
DC
203
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
209
A
N2
DG
9
1_555
B
DC
203
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
209
A
O6
DG
9
1_555
B
DC
203
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
210
A
N1
DG
10
1_555
B
DC
202
B
N3
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
210
A
N2
DG
10
1_555
B
DC
202
B
O2
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
210
A
O6
DG
10
1_555
B
DC
202
B
N4
DC
2
1_555
hydrog
WATSON-CRICK
A
DA
211
A
N1
DA
11
1_555
B
DT
201
B
N3
DT
1
1_555
hydrog
WATSON-CRICK
A
DA
211
A
N6
DA
11
1_555
B
DT
201
B
O4
DT
1
1_555
TRANSCRIPTION
TRANSCRIPTION, POU DOMAIN, DIMER, DNA BINDING
1E3O
PDB
1
1E3O
1E3O
PDB
2
1E3O
OCT1_HUMAN
UNP
3
P14859
201
211
1E3O
201
211
1E3O
A
1
1
11
201
211
1E3O
201
211
1E3O
B
2
1
11
280
438
1E3O
1
160
P14859
C
3
1
160
3
CYS
engineered mutation
SER
61
1E3O
C
P14859
UNP
340
61
3
ASN
conflict
ALA
76
1E3O
C
P14859
UNP
355
76
3
insertion
ASN
77
1E3O
C
P14859
UNP
77
3
LEU
conflict
MET
121
1E3O
C
P14859
UNP
399
121
3
GLU
conflict
ASP
130
1E3O
C
P14859
UNP
408
130
3
MET
conflict
LEU
133
1E3O
C
P14859
UNP
411
133
3
ASP
conflict
GLU
136
1E3O
C
P14859
UNP
414
136
3
CYS
engineered mutation
SER
150
1E3O
C
P14859
UNP
428
150
5
C 1 2 1