0.020651
0.011923
0.000000
0.000000
0.023846
0.000000
0.000000
0.000000
0.008341
0.00000
0.00000
0.00000
Tormo, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
48.424
48.424
119.886
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
R
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
N
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
N
373
N
O
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
N
391
N
C
N
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
Y
261
N
doub
Y
262
N
sing
Y
263
N
sing
N
264
N
sing
Y
265
N
doub
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
Y
335
N
sing
Y
336
N
sing
N
337
N
sing
Y
338
N
sing
Y
339
N
doub
N
340
N
sing
Y
341
N
doub
N
342
N
sing
Y
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
doub
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
276
7312
10.1074/JBC.M008573200
11036086
Crystal Structure of the C-Type Lectin-Like Domain from the Human Hematopoietic Cell Receptor Cd69
2001
10.2210/pdb1e87/pdb
pdb_00001e87
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.9310
1.0
ID14-3
ESRF
0.9310
SYNCHROTRON
ESRF BEAMLINE ID14-3
13806.557
EARLY ACTIVATION ANTIGEN CD69
C-TYPE LECTIN-LIKE DOMAIN, RESIDUES 82-199
1
man
polymer
65.409
ZINC ION
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
108
nat
water
ACTIVATION INDUCER MOLECULE, AIM, BL-AC/P26, C-TYPE LECTIN DOMAIN FAMILY 2 MEMBER C, EA1, EARLY T-CELL ACTIVATION ANTIGEN P60, GP32/28, LEUKOCYTE SURFACE ANTIGEN LEU-23, MLR-3, CD69, LEU-23
no
no
VSSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHWVGLKKEPGHPWKWSNGKEF
NNWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNKPYK
VSSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHWVGLKKEPGHPWKWSNGKEF
NNWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNKPYK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
HEMATOPOIETIC CELL
CELL SURFACE
9606
HOMO SAPIENS
INCLUSION BODIES
469008
ESCHERICHIA COLI
BL21(DE3)
PET26
1
2.94
58
5.20
pH 5.20
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Derived calculations
Non-polymer description
Other
Refinement description
Structure summary
Version format compliance
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2000-09-26
1
1
2011-08-24
1
2
2023-12-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
HUMAN CD69 - TETRAGONAL FORM
PDBE
Y
PDBE
2000-09-18
REL
REL
ZN
ZINC ION
GOL
GLYCEROL
HOH
water
SIGNAL TRANSMITTING RECEPTOR IN LYMPHOCYTES, NATURAL KILLER (NK)
CELLS, AND PLATELETS. INVOLVED IN LYMPHOCYTE PROLIFERATION
1E8I
PDB ENTRY 1E8I
PDB
experimental model
ZN
1001
2
ZN
ZN
1001
A
GOL
1002
3
GOL
GOL
1002
A
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2060
4
HOH
HOH
2060
A
HOH
2061
4
HOH
HOH
2061
A
HOH
2062
4
HOH
HOH
2062
A
HOH
2063
4
HOH
HOH
2063
A
HOH
2064
4
HOH
HOH
2064
A
HOH
2065
4
HOH
HOH
2065
A
HOH
2066
4
HOH
HOH
2066
A
HOH
2067
4
HOH
HOH
2067
A
HOH
2068
4
HOH
HOH
2068
A
HOH
2069
4
HOH
HOH
2069
A
HOH
2070
4
HOH
HOH
2070
A
HOH
2071
4
HOH
HOH
2071
A
HOH
2072
4
HOH
HOH
2072
A
HOH
2073
4
HOH
HOH
2073
A
HOH
2074
4
HOH
HOH
2074
A
HOH
2075
4
HOH
HOH
2075
A
HOH
2076
4
HOH
HOH
2076
A
HOH
2077
4
HOH
HOH
2077
A
HOH
2078
4
HOH
HOH
2078
A
HOH
2079
4
HOH
HOH
2079
A
HOH
2080
4
HOH
HOH
2080
A
HOH
2081
4
HOH
HOH
2081
A
HOH
2082
4
HOH
HOH
2082
A
HOH
2083
4
HOH
HOH
2083
A
HOH
2084
4
HOH
HOH
2084
A
HOH
2085
4
HOH
HOH
2085
A
HOH
2086
4
HOH
HOH
2086
A
HOH
2087
4
HOH
HOH
2087
A
HOH
2088
4
HOH
HOH
2088
A
HOH
2089
4
HOH
HOH
2089
A
HOH
2090
4
HOH
HOH
2090
A
HOH
2091
4
HOH
HOH
2091
A
HOH
2092
4
HOH
HOH
2092
A
HOH
2093
4
HOH
HOH
2093
A
HOH
2094
4
HOH
HOH
2094
A
HOH
2095
4
HOH
HOH
2095
A
HOH
2096
4
HOH
HOH
2096
A
HOH
2097
4
HOH
HOH
2097
A
HOH
2098
4
HOH
HOH
2098
A
HOH
2099
4
HOH
HOH
2099
A
HOH
2100
4
HOH
HOH
2100
A
HOH
2101
4
HOH
HOH
2101
A
HOH
2102
4
HOH
HOH
2102
A
HOH
2103
4
HOH
HOH
2103
A
HOH
2104
4
HOH
HOH
2104
A
HOH
2105
4
HOH
HOH
2105
A
HOH
2106
4
HOH
HOH
2106
A
HOH
2107
4
HOH
HOH
2107
A
HOH
2108
4
HOH
HOH
2108
A
n
1
82
A
SER
83
n
2
SER
83
A
SER
84
n
3
SER
84
A
CYS
85
n
4
CYS
85
A
SER
86
n
5
SER
86
A
GLU
87
n
6
GLU
87
A
ASP
88
n
7
ASP
88
A
TRP
89
n
8
TRP
89
A
VAL
90
n
9
VAL
90
A
GLY
91
n
10
GLY
91
A
TYR
92
n
11
TYR
92
A
GLN
93
n
12
GLN
93
A
ARG
94
n
13
ARG
94
A
LYS
95
n
14
LYS
95
A
CYS
96
n
15
CYS
96
A
TYR
97
n
16
TYR
97
A
PHE
98
n
17
PHE
98
A
ILE
99
n
18
ILE
99
A
SER
100
n
19
SER
100
A
THR
101
n
20
THR
101
A
VAL
102
n
21
VAL
102
A
LYS
103
n
22
LYS
103
A
ARG
104
n
23
ARG
104
A
SER
105
n
24
SER
105
A
TRP
106
n
25
TRP
106
A
THR
107
n
26
THR
107
A
SER
108
n
27
SER
108
A
ALA
109
n
28
ALA
109
A
GLN
110
n
29
GLN
110
A
ASN
111
n
30
ASN
111
A
ALA
112
n
31
ALA
112
A
CYS
113
n
32
CYS
113
A
SER
114
n
33
SER
114
A
GLU
115
n
34
GLU
115
A
HIS
116
n
35
HIS
116
A
GLY
117
n
36
GLY
117
A
ALA
118
n
37
ALA
118
A
THR
119
n
38
THR
119
A
LEU
120
n
39
LEU
120
A
ALA
121
n
40
ALA
121
A
VAL
122
n
41
VAL
122
A
ILE
123
n
42
ILE
123
A
ASP
124
n
43
ASP
124
A
SER
125
n
44
SER
125
A
GLU
126
n
45
GLU
126
A
LYS
127
n
46
LYS
127
A
ASP
128
n
47
ASP
128
A
MET
129
n
48
MET
129
A
ASN
130
n
49
ASN
130
A
PHE
131
n
50
PHE
131
A
LEU
132
n
51
LEU
132
A
LYS
133
n
52
LYS
133
A
ARG
134
n
53
ARG
134
A
TYR
135
n
54
TYR
135
A
ALA
136
n
55
ALA
136
A
GLY
137
n
56
GLY
137
A
ARG
138
n
57
ARG
138
A
GLU
139
n
58
GLU
139
A
GLU
140
n
59
GLU
140
A
HIS
141
n
60
HIS
141
A
TRP
142
n
61
TRP
142
A
VAL
143
n
62
VAL
143
A
GLY
144
n
63
GLY
144
A
LEU
145
n
64
LEU
145
A
LYS
146
n
65
LYS
146
A
LYS
147
n
66
LYS
147
A
GLU
148
n
67
GLU
148
A
PRO
149
n
68
PRO
149
A
GLY
150
n
69
GLY
150
A
HIS
151
n
70
HIS
151
A
PRO
152
n
71
PRO
152
A
TRP
153
n
72
TRP
153
A
LYS
154
n
73
LYS
154
A
TRP
155
n
74
TRP
155
A
SER
156
n
75
SER
156
A
ASN
157
n
76
ASN
157
A
GLY
158
n
77
GLY
158
A
LYS
159
n
78
LYS
159
A
GLU
160
n
79
GLU
160
A
PHE
161
n
80
PHE
161
A
ASN
162
n
81
ASN
162
A
ASN
163
n
82
ASN
163
A
TRP
164
n
83
TRP
164
A
PHE
165
n
84
PHE
165
A
ASN
166
n
85
ASN
166
A
VAL
167
n
86
VAL
167
A
THR
168
n
87
THR
168
A
GLY
169
n
88
GLY
169
A
SER
170
n
89
SER
170
A
ASP
171
n
90
ASP
171
A
LYS
172
n
91
LYS
172
A
CYS
173
n
92
CYS
173
A
VAL
174
n
93
VAL
174
A
PHE
175
n
94
PHE
175
A
LEU
176
n
95
LEU
176
A
LYS
177
n
96
LYS
177
A
ASN
178
n
97
ASN
178
A
THR
179
n
98
THR
179
A
GLU
180
n
99
GLU
180
A
VAL
181
n
100
VAL
181
A
SER
182
n
101
SER
182
A
SER
183
n
102
SER
183
A
MET
184
n
103
MET
184
A
GLU
185
n
104
GLU
185
A
CYS
186
n
105
CYS
186
A
GLU
187
n
106
GLU
187
A
LYS
188
n
107
LYS
188
A
ASN
189
n
108
ASN
189
A
LEU
190
n
109
LEU
190
A
TYR
191
n
110
TYR
191
A
TRP
192
n
111
TRP
192
A
ILE
193
n
112
ILE
193
A
CYS
194
n
113
CYS
194
A
ASN
195
n
114
ASN
195
A
LYS
196
n
115
LYS
196
A
PRO
197
n
116
PRO
197
A
TYR
198
n
117
TYR
198
A
LYS
199
n
118
LYS
199
A
software_defined_assembly
PQS
2
dimeric
2150
-1.7
13950
A
HIS
116
A
ND1
HIS
35
1_555
A
ZN
1001
B
ZN
ZN
1_555
A
HOH
2104
D
O
HOH
1_555
105.8
A
HIS
116
A
ND1
HIS
35
1_555
A
ZN
1001
B
ZN
ZN
1_555
A
HOH
2105
D
O
HOH
1_555
98.9
A
HOH
2104
D
O
HOH
1_555
A
ZN
1001
B
ZN
ZN
1_555
A
HOH
2105
D
O
HOH
1_555
107.1
A
HIS
116
A
ND1
HIS
35
1_555
A
ZN
1001
B
ZN
ZN
1_555
A
HOH
2106
D
O
HOH
1_555
120.6
A
HOH
2104
D
O
HOH
1_555
A
ZN
1001
B
ZN
ZN
1_555
A
HOH
2106
D
O
HOH
1_555
106.2
A
HOH
2105
D
O
HOH
1_555
A
ZN
1001
B
ZN
ZN
1_555
A
HOH
2106
D
O
HOH
1_555
117.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
90
A
O
VAL
9
A
N
TYR
97
A
N
TYR
16
A
O
CYS
96
A
O
CYS
15
A
N
LYS
196
A
N
LYS
115
A
O
LYS
146
A
O
LYS
65
A
N
LYS
154
A
N
LYS
73
A
O
CYS
173
A
O
CYS
92
A
N
MET
184
A
N
MET
103
1
A
VAL
82
A
VAL
1
1
Y
1
A
A
OD2
O
ASP
HOH
171
2084
2.16
1
A
LYS
133
B
-62.87
-80.61
1
A
ARG
134
B
-28.79
-51.28
1
A
ALA
136
B
-36.57
-28.39
PROTEIN_REP.PARAM
PROTEIN.TOP
ION.PARAM
ION.TOP
WATER_REP.PARAM
WATER.TOP
GOL.PAR
GOL.TOP
20.3
0.29
0.36
0.00
0.29
0.00
-0.58
0.245
0.006
0.229
0.229
1.50
19.79
1961
26522
7.4
98.6
RANDOM
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1E8I
FLAT MODEL
35.6827
0.386021
0.21
0.19
5.00
0.11
0.06
1.50
19.79
108
1078
7
0
963
0.009
1.6
22.7
0.94
1.30
1.50
2.10
2.00
2.17
2.00
3.33
2.50
0.281
0.015
0.235
1.59
335
4015
6
7.7
99.1
19.5
1.500
20.000
1E87
26542
0.06200
1
33.5000
5.700
98.6
1.50
1.53
15.600
0.10600
1
100.0
refinement
CNS
1.0
data reduction
DENZO
data scaling
SCALEPACK
phasing
CNS
1.0
Human CD69 - trigonal form
1
N
N
2
N
N
3
N
N
4
N
N
THE BIOLOGICALLY FUNTIONAL MOLECULE IS A
DIMER WHICH CAN BE BUILT BY APPLYING THE MATRIX
GIVEN IN REMARK 350
A
SER
105
A
SER
24
HELX_P
A
HIS
116
A
HIS
35
1
1
12
A
SER
125
A
SER
44
HELX_P
A
GLY
137
A
GLY
56
1
2
13
disulf
2.037
A
CYS
85
A
SG
CYS
4
1_555
A
CYS
96
A
SG
CYS
15
1_555
disulf
2.076
A
CYS
113
A
SG
CYS
32
1_555
A
CYS
194
A
SG
CYS
113
1_555
disulf
2.021
A
CYS
173
A
SG
CYS
92
1_555
A
CYS
186
A
SG
CYS
105
1_555
metalc
2.088
A
HIS
116
A
ND1
HIS
35
1_555
A
ZN
1001
B
ZN
ZN
1_555
metalc
2.017
A
ZN
1001
B
ZN
ZN
1_555
A
HOH
2104
D
O
HOH
1_555
metalc
2.063
A
ZN
1001
B
ZN
ZN
1_555
A
HOH
2105
D
O
HOH
1_555
metalc
1.848
A
ZN
1001
B
ZN
ZN
1_555
A
HOH
2106
D
O
HOH
1_555
SUGAR BINDING PROTEIN
HEMATOPOIETIC CELL RECEPTOR, LEUCOCYTE, NKD, KLR, SUGAR BINDING PROTEIN
CD69_HUMAN
UNP
1
Q07108
82
199
1E87
82
199
Q07108
A
1
1
118
3
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
90
A
VAL
9
A
TYR
92
A
TYR
11
A
LYS
95
A
LYS
14
A
ILE
99
A
ILE
18
A
ILE
193
A
ILE
112
A
PRO
197
A
PRO
116
A
LEU
145
A
LEU
64
A
LYS
147
A
LYS
66
A
TRP
153
A
TRP
72
A
TRP
155
A
TRP
74
A
CYS
173
A
CYS
92
A
LYS
177
A
LYS
96
A
GLU
180
A
GLU
99
A
MET
184
A
MET
103
BINDING SITE FOR RESIDUE ZN A 1001
A
ZN
1001
Software
4
BINDING SITE FOR RESIDUE GOL A 1002
A
GOL
1002
Software
6
A
HIS
116
A
HIS
35
4
1_555
A
HOH
2104
D
HOH
4
1_555
A
HOH
2105
D
HOH
4
1_555
A
HOH
2106
D
HOH
4
1_555
A
SER
105
A
SER
24
6
1_555
A
SER
108
A
SER
27
6
1_555
A
GLU
187
A
GLU
106
6
1_555
A
HOH
2093
D
HOH
6
1_555
A
HOH
2107
D
HOH
6
1_555
A
HOH
2108
D
HOH
6
1_555
152
P 31 2 1