1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Pickford, A.R. Smith, S.P. Staunton, D. Boyd, J. Campbell, I.D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Embo J. EMJODG 0897 0261-4189 20 1519 10.1093/EMBOJ/20.7.1519 11285216 The Hairpin Structure of the (6)F1(1)F2(2)F2 Fragment from Human Fibronectin Enhances Gelatin Binding 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 17871.625 FIBRONECTIN 6F11F22F2, RESIDUES 305-464 1 man polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 1 man non-polymer FN, COLD-INSOLUBLE GLOBULIN, CIG, no no YGHCVTDSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPCVLPFTYNGRTFYSCTTEGRQDGHL WCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMA YGHCVTDSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPCVLPFTYNGRTFYSCTTEGRQDGHL WCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGALCHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN sample EXTRACELLULAR 9606 HOMO SAPIENS SECRETED 4922 PICHIA PASTORIS GS115 INTEGRATED PLASMID PPIC9K pdbx_nmr_spectrometer chem_comp entity pdbx_chem_comp_identifier pdbx_database_status pdbx_entity_nonpoly pdbx_nmr_software struct_conn struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Non-polymer description Other Structure summary Version format compliance Database references Derived calculations Data collection Data collection Derived calculations Other Structure summary 1 0 2000-10-15 1 1 2011-10-26 1 2 2012-11-28 1 3 2018-02-14 1 4 2020-07-29 _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.type _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_database_status.status_code_mr _pdbx_entity_nonpoly.name _pdbx_nmr_software.name _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc SOLUTION STRUCTURE OF 6F11F22F2, A COMPACT THREE-MODULE FRAGMENT OF THE GELATIN-BINDING DOMAIN OF HUMAN FIBRONECTIN PDBE Y PDBE 2000-09-18 REL REL NAG 2-acetamido-2-deoxy-beta-D-glucopyranose THE STRUCTURE WAS DETERMINED BY HETERONUCLEAR NMR SPECTROSCOPY ON UNIFORMLY 15N-LABELED 6F11F22F2. 1 2D [1H-1H] NOESY (60MS MIXIMG TIME) 3D [1H-15N] NOESY (60MS MIXING TIME) HMQC-J. 4.5 pH 298 K REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. AB INITIO SIMULATED ANNEALING 2MM 6F11F22F2, 20MM PHOSPHATE BUFFER BRUNGER ET AL. refinement CNS 0.9 structure solution Felix 2.3 structure solution NMRView structure solution CNS 750 Oxford HOME-BUILT SPECTROMETER INCORPORATING OXFORD INSTRUMENTS MAGNET NAG 161 2 NAG NAG 161 A TYR 1 n 1 TYR 1 A GLY 2 n 2 GLY 2 A HIS 3 n 3 HIS 3 A CYS 4 n 4 CYS 4 A VAL 5 n 5 VAL 5 A THR 6 n 6 THR 6 A ASP 7 n 7 ASP 7 A SER 8 n 8 SER 8 A GLY 9 n 9 GLY 9 A VAL 10 n 10 VAL 10 A VAL 11 n 11 VAL 11 A TYR 12 n 12 TYR 12 A SER 13 n 13 SER 13 A VAL 14 n 14 VAL 14 A GLY 15 n 15 GLY 15 A MET 16 n 16 MET 16 A GLN 17 n 17 GLN 17 A TRP 18 n 18 TRP 18 A LEU 19 n 19 LEU 19 A LYS 20 n 20 LYS 20 A THR 21 n 21 THR 21 A GLN 22 n 22 GLN 22 A GLY 23 n 23 GLY 23 A ASN 24 n 24 ASN 24 A LYS 25 n 25 LYS 25 A GLN 26 n 26 GLN 26 A MET 27 n 27 MET 27 A LEU 28 n 28 LEU 28 A CYS 29 n 29 CYS 29 A THR 30 n 30 THR 30 A CYS 31 n 31 CYS 31 A LEU 32 n 32 LEU 32 A GLY 33 n 33 GLY 33 A ASN 34 n 34 ASN 34 A GLY 35 n 35 GLY 35 A VAL 36 n 36 VAL 36 A SER 37 n 37 SER 37 A CYS 38 n 38 CYS 38 A GLN 39 n 39 GLN 39 A GLU 40 n 40 GLU 40 A THR 41 n 41 THR 41 A ALA 42 n 42 ALA 42 A VAL 43 n 43 VAL 43 A THR 44 n 44 THR 44 A GLN 45 n 45 GLN 45 A THR 46 n 46 THR 46 A TYR 47 n 47 TYR 47 A GLY 48 n 48 GLY 48 A GLY 49 n 49 GLY 49 A ASN 50 n 50 ASN 50 A SER 51 n 51 SER 51 A ASN 52 n 52 ASN 52 A GLY 53 n 53 GLY 53 A GLU 54 n 54 GLU 54 A PRO 55 n 55 PRO 55 A CYS 56 n 56 CYS 56 A VAL 57 n 57 VAL 57 A LEU 58 n 58 LEU 58 A PRO 59 n 59 PRO 59 A PHE 60 n 60 PHE 60 A THR 61 n 61 THR 61 A TYR 62 n 62 TYR 62 A ASN 63 n 63 ASN 63 A GLY 64 n 64 GLY 64 A ARG 65 n 65 ARG 65 A THR 66 n 66 THR 66 A PHE 67 n 67 PHE 67 A TYR 68 n 68 TYR 68 A SER 69 n 69 SER 69 A CYS 70 n 70 CYS 70 A THR 71 n 71 THR 71 A THR 72 n 72 THR 72 A GLU 73 n 73 GLU 73 A GLY 74 n 74 GLY 74 A ARG 75 n 75 ARG 75 A GLN 76 n 76 GLN 76 A ASP 77 n 77 ASP 77 A GLY 78 n 78 GLY 78 A HIS 79 n 79 HIS 79 A LEU 80 n 80 LEU 80 A TRP 81 n 81 TRP 81 A CYS 82 n 82 CYS 82 A SER 83 n 83 SER 83 A THR 84 n 84 THR 84 A THR 85 n 85 THR 85 A SER 86 n 86 SER 86 A ASN 87 n 87 ASN 87 A TYR 88 n 88 TYR 88 A GLU 89 n 89 GLU 89 A GLN 90 n 90 GLN 90 A ASP 91 n 91 ASP 91 A GLN 92 n 92 GLN 92 A LYS 93 n 93 LYS 93 A TYR 94 n 94 TYR 94 A SER 95 n 95 SER 95 A PHE 96 n 96 PHE 96 A CYS 97 n 97 CYS 97 A THR 98 n 98 THR 98 A ASP 99 n 99 ASP 99 A HIS 100 n 100 HIS 100 A THR 101 n 101 THR 101 A VAL 102 n 102 VAL 102 A LEU 103 n 103 LEU 103 A VAL 104 n 104 VAL 104 A GLN 105 n 105 GLN 105 A THR 106 n 106 THR 106 A ARG 107 n 107 ARG 107 A GLY 108 n 108 GLY 108 A GLY 109 n 109 GLY 109 A ASN 110 n 110 ASN 110 A SER 111 n 111 SER 111 A ASN 112 n 112 ASN 112 A GLY 113 n 113 GLY 113 A ALA 114 n 114 ALA 114 A LEU 115 n 115 LEU 115 A CYS 116 n 116 CYS 116 A HIS 117 n 117 HIS 117 A PHE 118 n 118 PHE 118 A PRO 119 n 119 PRO 119 A PHE 120 n 120 PHE 120 A LEU 121 n 121 LEU 121 A TYR 122 n 122 TYR 122 A ASN 123 n 123 ASN 123 A ASN 124 n 124 ASN 124 A HIS 125 n 125 HIS 125 A ASN 126 n 126 ASN 126 A TYR 127 n 127 TYR 127 A THR 128 n 128 THR 128 A ASP 129 n 129 ASP 129 A CYS 130 n 130 CYS 130 A THR 131 n 131 THR 131 A SER 132 n 132 SER 132 A GLU 133 n 133 GLU 133 A GLY 134 n 134 GLY 134 A ARG 135 n 135 ARG 135 A ARG 136 n 136 ARG 136 A ASP 137 n 137 ASP 137 A ASN 138 n 138 ASN 138 A MET 139 n 139 MET 139 A LYS 140 n 140 LYS 140 A TRP 141 n 141 TRP 141 A CYS 142 n 142 CYS 142 A GLY 143 n 143 GLY 143 A THR 144 n 144 THR 144 A THR 145 n 145 THR 145 A GLN 146 n 146 GLN 146 A ASN 147 n 147 ASN 147 A TYR 148 n 148 TYR 148 A ASP 149 n 149 ASP 149 A ALA 150 n 150 ALA 150 A ASP 151 n 151 ASP 151 A GLN 152 n 152 GLN 152 A LYS 153 n 153 LYS 153 A PHE 154 n 154 PHE 154 A GLY 155 n 155 GLY 155 A PHE 156 n 156 PHE 156 A CYS 157 n 157 CYS 157 A PRO 158 n 158 PRO 158 A MET 159 n 159 MET 159 A ALA 160 n 160 ALA 160 A software_defined_assembly PISA 1 monomeric A ASN 126 GLYCOSYLATION SITE A ASN 126 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O CYS 4 A O CYS 4 A N TYR 12 A N TYR 12 A O MET 16 A O MET 16 A N CYS 31 A N CYS 31 A O LEU 28 A O LEU 28 A N GLN 39 A N GLN 39 A O PHE 60 A O PHE 60 A N PHE 67 A N PHE 67 A O CYS 82 A O CYS 82 A N SER 95 A N SER 95 A O PHE 120 A O PHE 120 A N TYR 127 A N TYR 127 A O CYS 142 A O CYS 142 A N GLY 155 A N GLY 155 1 A A O H TYR GLN 148 152 1.58 1 A A O H THR SER 30 37 1.58 1 A A O H GLU ALA 40 42 1.58 1 A A O H THR ARG 72 75 1.60 1 A HIS 3 54.61 160.09 1 A ASP 7 64.64 -91.52 1 A SER 8 -152.36 30.74 1 A SER 13 -43.26 159.87 1 A VAL 14 -50.47 173.91 1 A TRP 18 -170.20 129.31 1 A LEU 32 -143.18 24.08 1 A GLU 40 -36.33 158.20 1 A THR 41 -64.89 62.20 1 A VAL 43 -47.65 -178.35 1 A GLN 45 -63.11 68.63 1 A TYR 47 -175.70 149.45 1 A ASN 50 -89.68 32.82 1 A SER 51 -142.27 12.11 1 A GLU 54 -61.96 -174.39 1 A VAL 57 -154.50 66.99 1 A ASN 63 76.28 -11.32 1 A THR 84 -95.53 30.15 1 A THR 85 -172.88 131.93 1 A TYR 88 -45.09 -74.33 1 A ASP 99 33.00 39.34 1 A HIS 100 33.54 43.96 1 A THR 101 28.64 47.93 1 A VAL 102 -38.88 149.22 1 A ASN 110 -148.24 16.52 1 A ASN 112 44.31 89.32 1 A LEU 115 -64.89 84.31 1 A ASN 124 48.48 24.99 1 A ASN 126 -34.88 142.67 1 A ASP 129 166.95 139.53 1 A CYS 130 -49.14 86.41 1 A SER 132 -109.75 53.83 1 A ASN 138 -41.07 91.16 1 A MET 139 -164.46 54.16 1 A LYS 140 -36.36 142.60 1 A PRO 158 -53.73 -176.27 FIBRONECTIN MINIMIZED AVERAGE Solution structure of 6F11F22F2, a compact three-module fragment of the gelatin-binding domain of human fibronectin 1 N N 2 N N A ASN 87 A ASN 87 HELX_P A GLN 92 A GLN 92 1 1 6 A ASN 147 A ASN 147 HELX_P A GLN 152 A GLN 152 1 2 6 disulf 2.031 A CYS 4 A SG CYS 4 1_555 A CYS 31 A SG CYS 31 1_555 disulf 2.030 A CYS 29 A SG CYS 29 1_555 A CYS 38 A SG CYS 38 1_555 disulf 2.030 A CYS 56 A SG CYS 56 1_555 A CYS 82 A SG CYS 82 1_555 disulf 2.029 A CYS 70 A SG CYS 70 1_555 A CYS 97 A SG CYS 97 1_555 disulf 2.030 A CYS 116 A SG CYS 116 1_555 A CYS 142 A SG CYS 142 1_555 disulf 2.030 A CYS 130 A SG CYS 130 1_555 A CYS 157 A SG CYS 157 1_555 covale 1.454 one N-Glycosylation A ASN 126 A ND2 ASN 126 1_555 A NAG 161 B C1 NAG 1_555 CELL ADHESION EXTRACELLULAR MATRIX GLYCOPROTEIN, CELL ADHESION A LEU 58 A LEU 58 1 A PRO 59 A PRO 59 0.00 A PHE 118 A PHE 118 1 A PRO 119 A PRO 119 -0.04 FINC_HUMAN UNP 1 P02751 305 464 1E8B 1 160 P02751 A 1 1 160 2 3 2 2 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A CYS 4 A CYS 4 A THR 6 A THR 6 A VAL 10 A VAL 10 A TYR 12 A TYR 12 A MET 16 A MET 16 A THR 21 A THR 21 A GLN 26 A GLN 26 A CYS 31 A CYS 31 A VAL 36 A VAL 36 A GLU 40 A GLU 40 A PHE 60 A PHE 60 A TYR 62 A TYR 62 A ARG 65 A ARG 65 A PHE 67 A PHE 67 A TRP 81 A TRP 81 A SER 83 A SER 83 A TYR 94 A TYR 94 A PHE 96 A PHE 96 A PHE 120 A PHE 120 A TYR 122 A TYR 122 A HIS 125 A HIS 125 A TYR 127 A TYR 127 A TRP 141 A TRP 141 A GLY 143 A GLY 143 A PHE 154 A PHE 154 A PHE 156 A PHE 156 1 P 1