1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Lamosa, P. Brennan, L. Vis, H. Turner, D.L. Santos, H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking DE Extremophiles 1431-0651 5 303 311 11699644 NMR structure of Desulfovibrio gigas rubredoxin: a model for studying protein stabilization by compatible solutes. 2001 US Appl.Environ.Microbiol. AEMIDF 2106 0099-2240 66 1974 10.1128/AEM.66.5.1974-1979.2000 10788369 Thermostabilization of Proteins by Diglycerol Phosphate, a New Compatible Solute from the Hyperthermophile Archaeoglobus Fulgidus 2000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 IRON-SULFUR-PROTEIN, ZINC SUBSTITUTED 5682.304 RUBREDOXIN 1 man polymer no no MDIYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEKQ MDIYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEKQ A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample CYTOPLASM 879 DESULFOVIBRIO GIGAS CYTOPLASM RDDG 562 ESCHERICHIA COLI JM109 PRPPL1 citation pdbx_database_status repository Initial release Database references Derived calculations Other Structure summary Version format compliance Data collection Database references Other 1 0 2001-10-18 1 1 2013-01-30 1 2 2019-10-09 _citation.page_last _citation.title _pdbx_database_status.status_code_mr PDBE Y PDBE 2000-09-21 REL REL LEAST RESTRAINT VIOLATION 500 20 2D-1H-NOESY 2D-1H-TOCSY 2D-1H-COSY 7.6 pH 308 K TORSION ANGLE DYNAMICS WITH SIMULATED ANNEALING 1 D.L.TURNER,L.BRENNAN,H. MEYER,C.LOHAUS, C.SIETHOFF,H.S.COSTA,B.GONZALEZ,H.SANTOS, J.E.SUAREZ refinement INDYANA structure solution INDYANA 500 Bruker DRX MET 1 n 1 MET 1 A ASP 2 n 2 ASP 2 A ILE 3 n 3 ILE 3 A TYR 4 n 4 TYR 4 A VAL 5 n 5 VAL 5 A CYS 6 n 6 CYS 6 A THR 7 n 7 THR 7 A VAL 8 n 8 VAL 8 A CYS 9 n 9 CYS 9 A GLY 10 n 10 GLY 10 A TYR 11 n 11 TYR 11 A GLU 12 n 12 GLU 12 A TYR 13 n 13 TYR 13 A ASP 14 n 14 ASP 14 A PRO 15 n 15 PRO 15 A ALA 16 n 16 ALA 16 A LYS 17 n 17 LYS 17 A GLY 18 n 18 GLY 18 A ASP 19 n 19 ASP 19 A PRO 20 n 20 PRO 20 A ASP 21 n 21 ASP 21 A SER 22 n 22 SER 22 A GLY 23 n 23 GLY 23 A ILE 24 n 24 ILE 24 A LYS 25 n 25 LYS 25 A PRO 26 n 26 PRO 26 A GLY 27 n 27 GLY 27 A THR 28 n 28 THR 28 A LYS 29 n 29 LYS 29 A PHE 30 n 30 PHE 30 A GLU 31 n 31 GLU 31 A ASP 32 n 32 ASP 32 A LEU 33 n 33 LEU 33 A PRO 34 n 34 PRO 34 A ASP 35 n 35 ASP 35 A ASP 36 n 36 ASP 36 A TRP 37 n 37 TRP 37 A ALA 38 n 38 ALA 38 A CYS 39 n 39 CYS 39 A PRO 40 n 40 PRO 40 A VAL 41 n 41 VAL 41 A CYS 42 n 42 CYS 42 A GLY 43 n 43 GLY 43 A ALA 44 n 44 ALA 44 A SER 45 n 45 SER 45 A LYS 46 n 46 LYS 46 A ASP 47 n 47 ASP 47 A ALA 48 n 48 ALA 48 A PHE 49 n 49 PHE 49 A GLU 50 n 50 GLU 50 A LYS 51 n 51 LYS 51 A GLN 52 n 52 GLN 52 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 5 A N VAL 5 A O GLU 50 A O GLU 50 1 A A O H TYR TYR 4 13 1.52 2 A A O HG1 LYS THR 25 28 1.50 3 A A O HG1 LYS THR 25 28 1.47 3 A A H O CYS ALA 39 44 1.59 4 A A O HG1 LYS THR 25 28 1.50 5 A A O HG1 LYS THR 25 28 1.50 6 A A O H ASP GLY 14 18 1.50 7 A A O HG1 LYS THR 25 28 1.47 8 A A O HG1 LYS THR 25 28 1.58 9 A A O HG1 LYS THR 25 28 1.54 10 A A O HG1 LYS THR 25 28 1.51 10 A A O H ASP GLY 14 18 1.51 11 A A HG22 OXT VAL GLN 5 52 1.40 11 A A O HG1 LYS THR 25 28 1.51 12 A A O HG1 LYS THR 25 28 1.53 12 A A O H TYR TYR 4 13 1.59 13 A A O HG1 LYS THR 25 28 1.56 13 A A OE1 OXT GLU GLN 50 52 1.88 14 A A O H ASP GLY 14 18 1.54 15 A A O H ASP GLY 14 18 1.52 15 A A O HG1 LYS THR 25 28 1.54 15 A A O H TYR TYR 4 13 1.59 16 A A O HG1 LYS THR 25 28 1.51 16 A A O H TYR TYR 4 13 1.57 16 A A CG1 OXT VAL GLN 5 52 2.16 17 A A O H ASP LYS 14 17 1.53 18 A A O HG1 LYS THR 25 28 1.54 19 A A O H TYR TYR 4 13 1.58 20 A A O HG1 LYS THR 25 28 1.57 20 A A H O CYS ALA 39 44 1.59 1 A ASP 2 173.38 45.71 1 A ASP 14 50.22 99.85 1 A SER 22 159.87 -26.88 1 A PRO 34 -42.31 165.54 1 A ASP 36 -144.87 18.21 1 A CYS 39 -42.20 100.31 1 A ALA 44 -24.68 133.05 1 A SER 45 -57.75 -175.41 1 A LYS 46 -90.53 38.65 1 A LYS 51 -42.62 100.71 2 A CYS 9 -120.20 -68.40 2 A ASP 21 -133.62 -74.52 2 A PRO 34 -42.30 165.27 2 A ASP 36 -148.80 20.68 2 A CYS 39 -42.98 100.68 2 A ALA 44 -26.11 135.13 2 A SER 45 -60.28 -171.57 2 A LYS 46 -91.08 36.00 2 A PHE 49 -36.07 149.46 2 A LYS 51 -44.63 98.20 3 A ASP 2 -171.88 96.60 3 A CYS 9 -120.17 -67.81 3 A TYR 11 35.29 -151.26 3 A GLU 12 163.58 82.92 3 A PRO 20 -60.73 -164.11 3 A ASP 21 81.62 33.59 3 A SER 22 69.82 95.39 3 A PRO 34 -41.11 163.38 3 A ASP 36 -151.70 22.07 3 A CYS 39 -43.32 100.81 3 A ALA 44 -23.55 131.57 3 A SER 45 -58.67 -170.89 3 A LYS 46 -92.28 30.92 3 A PHE 49 -36.53 149.62 3 A LYS 51 -40.20 98.20 4 A ASP 2 -172.64 135.74 4 A CYS 9 -120.32 -68.91 4 A TYR 11 34.68 -150.18 4 A GLU 12 163.08 80.25 4 A ASP 21 179.26 60.92 4 A SER 22 39.57 52.55 4 A PRO 34 -31.87 -70.82 4 A ASP 35 151.80 -49.39 4 A CYS 39 -44.43 101.34 4 A ALA 44 -21.64 128.79 4 A SER 45 -53.78 -171.76 4 A LYS 46 -92.83 30.34 4 A PHE 49 -35.78 149.81 4 A LYS 51 -40.51 98.30 5 A ASP 2 165.05 -72.99 5 A CYS 9 -120.93 -68.51 5 A ASP 19 -155.99 75.05 5 A ASP 21 179.22 -56.81 5 A PRO 34 -43.36 167.01 5 A ASP 36 -145.87 18.95 5 A CYS 39 -42.67 100.52 5 A ALA 44 -26.79 136.51 5 A SER 45 -54.43 -170.95 5 A LYS 51 -40.38 105.08 6 A TYR 11 35.33 -151.30 6 A GLU 12 163.39 79.97 6 A SER 22 76.28 -56.43 6 A PRO 34 -33.49 -70.13 6 A ASP 35 150.70 -47.17 6 A CYS 39 -44.30 101.38 6 A ALA 44 -21.12 128.74 6 A SER 45 -52.51 -174.06 6 A LYS 46 -92.34 30.55 6 A LYS 51 -47.03 99.15 7 A ASP 2 -172.84 81.57 7 A GLU 12 -56.52 109.49 7 A ASP 19 -150.29 64.21 7 A PRO 20 -56.51 -162.00 7 A SER 22 62.27 101.49 7 A PRO 34 -43.60 165.58 7 A ASP 36 -144.25 17.67 7 A CYS 39 -43.62 100.86 7 A ALA 44 -25.56 134.70 7 A SER 45 -60.40 -173.35 7 A LYS 46 -90.54 38.34 7 A LYS 51 -47.76 108.69 8 A ASP 2 -103.16 64.52 8 A CYS 9 -126.28 -65.47 8 A TYR 11 34.97 -150.79 8 A GLU 12 169.19 89.13 8 A ASP 19 -156.90 73.97 8 A SER 22 -164.21 29.42 8 A ASP 35 153.65 -47.40 8 A ALA 48 -39.26 -84.36 8 A PHE 49 -33.93 131.18 8 A LYS 51 61.23 147.70 9 A ASP 2 -171.89 69.05 9 A CYS 9 -123.65 -65.20 9 A ASP 19 -161.12 87.31 9 A ASP 21 -115.95 62.54 9 A SER 22 174.48 -36.57 9 A ASP 35 153.75 -46.57 9 A ASP 47 -85.64 47.01 9 A LYS 51 -43.62 101.06 10 A ASP 2 171.79 110.43 10 A CYS 9 -120.32 -68.01 10 A TYR 11 33.87 -148.08 10 A GLU 12 159.61 84.10 10 A SER 22 60.62 70.45 10 A PRO 34 -42.07 165.29 10 A ASP 36 -148.70 20.37 10 A CYS 39 -43.68 100.92 10 A ALA 44 -23.05 131.16 10 A SER 45 -56.91 -171.52 10 A PHE 49 -36.24 149.06 10 A LYS 51 -40.25 99.60 11 A TYR 11 37.02 -155.28 11 A GLU 12 169.59 87.14 11 A PRO 20 -89.13 43.23 11 A ASP 21 -165.38 52.21 11 A SER 22 -177.88 -53.15 11 A PRO 34 -41.78 164.64 11 A ASP 36 -145.70 18.35 11 A CYS 39 -43.78 101.02 11 A ALA 44 -25.28 135.64 11 A SER 45 -60.88 -172.10 11 A LYS 46 -91.85 31.02 11 A LYS 51 -40.23 102.11 12 A ASP 2 -178.25 79.20 12 A ASP 19 -161.49 80.04 12 A SER 22 84.34 -56.23 12 A PRO 34 -43.47 167.22 12 A ASP 36 -145.90 19.02 12 A CYS 39 -43.18 100.99 12 A ALA 44 -26.77 136.23 12 A SER 45 -54.98 -169.48 12 A LYS 51 -38.50 98.51 13 A ASP 2 40.33 86.27 13 A CYS 9 -125.65 -68.06 13 A ASP 19 -155.95 87.33 13 A ASP 21 -141.44 -51.66 13 A PRO 34 -41.64 164.39 13 A ASP 36 -152.15 22.96 13 A ASP 47 -84.57 48.72 13 A ALA 48 -131.34 -45.57 13 A LYS 51 -39.94 104.37 14 A TYR 11 33.36 -147.18 14 A GLU 12 160.04 79.44 14 A ASP 19 -162.07 82.41 14 A PRO 20 -76.13 -163.84 14 A SER 22 81.68 91.69 14 A PRO 34 -47.70 -18.73 14 A ASP 35 87.74 -45.98 14 A CYS 39 -45.62 102.09 14 A ALA 44 -23.25 131.84 14 A SER 45 -53.53 -171.22 14 A LYS 51 -39.96 102.90 15 A ASP 2 -175.70 65.63 15 A ASP 19 -158.23 78.70 15 A ASP 21 177.98 57.83 15 A SER 22 165.22 -58.14 15 A PRO 34 -43.22 166.69 15 A ASP 36 -145.99 19.01 15 A CYS 39 -43.07 100.73 15 A ALA 44 -27.26 136.69 15 A SER 45 -55.97 -168.41 15 A LYS 51 -40.04 100.24 16 A ASP 2 57.06 95.62 16 A SER 22 159.82 -27.54 16 A PRO 34 -44.29 165.71 16 A ASP 36 -143.82 17.66 16 A CYS 39 -44.27 101.55 16 A ALA 44 -26.21 135.87 16 A SER 45 -53.86 -170.60 16 A LYS 51 -39.91 103.02 17 A CYS 9 -126.38 -68.61 17 A TYR 11 33.74 -146.81 17 A GLU 12 164.17 84.23 17 A ASP 21 45.97 75.51 17 A SER 22 175.30 -35.11 17 A ASP 35 85.00 -50.29 17 A VAL 41 -84.01 -70.51 17 A ASP 47 -86.50 44.82 17 A LYS 51 -39.75 106.77 18 A ASP 19 -163.55 75.13 18 A ASP 21 74.96 -69.58 18 A SER 22 -52.09 -72.56 18 A PRO 34 -42.46 165.45 18 A ASP 36 -148.81 20.43 18 A CYS 39 -42.99 100.78 18 A ALA 44 -26.13 135.22 18 A SER 45 -54.13 -170.19 18 A LYS 51 -40.22 102.94 19 A GLU 12 -56.40 104.03 19 A ASP 19 -157.88 83.44 19 A ASP 21 -131.82 -53.41 19 A ASP 36 156.50 -25.18 19 A CYS 39 -44.64 101.59 19 A ALA 44 -27.22 137.24 19 A SER 45 -62.77 -171.71 19 A LYS 46 -90.87 35.48 19 A PHE 49 -35.73 149.18 19 A LYS 51 -40.33 98.44 20 A ASP 2 -159.47 83.45 20 A CYS 9 -120.27 -68.84 20 A TYR 11 34.63 -150.30 20 A GLU 12 162.56 78.32 20 A PRO 34 -32.60 -70.66 20 A ASP 35 151.97 -49.24 20 A CYS 39 -44.89 101.67 20 A ALA 44 -20.58 127.41 20 A SER 45 -55.10 -172.47 20 A LYS 46 -92.40 34.23 20 A PHE 49 -35.24 149.49 20 A LYS 51 -40.44 98.19 RUBREDOXIN SOLUTION STRUCTURE OF DESULFOVIBRIO GIGAS ZINC RUBREDOXIN, NMR, 20 STRUCTURES 1 N N ELECTRON TRANSPORT ELECTRON TRANSPORT, ZINC-SUBSTITUTION, THERMOSTABILITY RUBR_DESGI UNP 1 P00270 1 52 1E8J 1 52 P00270 A 1 1 52 2 anti-parallel A TYR 4 A TYR 4 A VAL 5 A VAL 5 A GLU 50 A GLU 50 A LYS 51 A LYS 51 1 P 1