0.004686
0.000000
0.000000
0.000000
0.013151
0.000000
0.000000
0.000000
0.019794
0.00000
0.00000
0.00000
Gomis-Rueth, F.X.
Costa, M.
Sola, M.
Acebo, P.
Eritja, R.
Espinosa, M.
Solar, G.D.
Coll, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
40
90.00
90.00
90.00
213.400
76.040
50.520
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
O
N
59
N
P
N
60
N
O
N
61
N
O
N
62
N
O
N
63
N
C
N
64
R
C
N
65
N
O
N
66
S
C
N
67
N
O
N
68
N
C
N
69
R
C
Y
70
N
N
Y
71
N
C
Y
72
N
N
Y
73
N
C
Y
74
N
C
N
75
N
N
Y
76
N
N
Y
77
N
C
Y
78
N
N
Y
79
N
C
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
O
N
95
N
P
N
96
N
O
N
97
N
O
N
98
N
O
N
99
N
C
N
100
R
C
N
101
N
O
N
102
S
C
N
103
N
O
N
104
N
C
N
105
R
C
N
106
N
N
N
107
N
C
N
108
N
O
N
109
N
N
N
110
N
C
N
111
N
N
N
112
N
C
N
113
N
C
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
O
N
129
N
P
N
130
N
O
N
131
N
O
N
132
N
O
N
133
N
C
N
134
R
C
N
135
N
O
N
136
S
C
N
137
N
O
N
138
N
C
N
139
R
C
Y
140
N
N
Y
141
N
C
Y
142
N
N
Y
143
N
C
N
144
N
C
N
145
N
O
N
146
N
N
N
147
N
C
N
148
N
N
N
149
N
N
Y
150
N
C
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
O
N
166
N
P
N
167
N
O
N
168
N
O
N
169
N
O
N
170
N
C
N
171
R
C
N
172
N
O
N
173
S
C
N
174
N
O
N
175
N
C
N
176
R
C
N
177
N
N
N
178
N
C
N
179
N
O
N
180
N
N
N
181
N
C
N
182
N
O
N
183
N
C
N
184
N
C
N
185
N
C
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
N
N
202
S
C
N
203
N
C
N
204
N
O
N
205
N
C
N
206
N
C
N
207
N
C
N
208
N
O
N
209
N
N
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
N
N
222
S
C
N
223
N
C
N
224
N
O
N
225
N
C
N
226
N
C
N
227
N
C
N
228
N
O
N
229
N
O
N
230
N
O
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
N
C
N
242
N
C
N
243
N
O
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
O
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
S
C
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
N
N
276
S
C
N
277
N
C
N
278
N
O
N
279
N
C
N
280
N
C
N
281
N
C
N
282
N
C
N
283
N
O
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
N
302
N
C
N
303
N
C
N
304
N
C
N
305
N
N
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
N
327
N
C
N
328
N
S
N
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
N
347
N
O
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
N
N
357
S
C
N
358
N
C
N
359
N
O
N
360
R
C
N
361
N
O
N
362
N
C
N
363
N
O
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
N
384
N
O
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
N
N
398
S
C
N
399
N
C
N
400
N
O
N
401
N
C
N
402
N
C
N
403
N
C
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
Y
78
N
sing
Y
79
N
sing
Y
80
N
doub
N
81
N
sing
Y
82
N
sing
Y
83
N
sing
Y
84
N
doub
N
85
N
sing
Y
86
N
doub
N
87
N
sing
N
88
N
sing
Y
89
N
sing
Y
90
N
doub
N
91
N
sing
Y
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
Y
151
N
sing
Y
152
N
sing
Y
153
N
doub
N
154
N
sing
Y
155
N
sing
N
156
N
sing
Y
157
N
doub
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
doub
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
doub
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
doub
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
Y
377
N
doub
Y
378
N
sing
Y
379
N
sing
N
380
N
sing
Y
381
N
doub
N
382
N
sing
Y
383
N
doub
N
384
N
sing
Y
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
310
403
10.1006/JMBI.2001.4760
11428897
Plasmid Transcriptional Repressor Copg Oligomerises to Render Helical Superstructures Unbound and in Complexes with Oligonucleotides
2001
UK
Embo J.
EMJODG
0897
0261-4189
17
7404
10.1093/EMBOJ/17.24.7404
9857196
The Structure of Plasmid-Encoded Transcriptional Repressor Copg Unliganded and Bound to its Operator
1998
NE
FEBS Lett.
FEBLAL
0165
0014-5793
425
161
10.1016/S0014-5793(98)00219-1
9541028
Overexpression, Purification, Crystallization and Preliminary X-Ray Diffraction Analysis of the Pmv158-Encoded Plasmid Transcriptional Repressor Protein Copg
1998
10.2210/pdb1ea4/pdb
pdb_00001ea4
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110.0
1
IMAGE PLATE
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.0527
1.0
5.2R
ELETTRA
1.0527
SYNCHROTRON
ELETTRA BEAMLINE 5.2R
5124.092
TRANSCRIPTIONAL REPRESSOR COPG
DNA-BINDING PROTEIN
10
man
polymer
6680.344
DNA (5'-D(*TP*AP*AP*CP*CP*GP*TP*GP *CP*AP*CP*TP*CP*AP*AP*TP*GP*CP*AP*AP*TP*C)-3')
22BP SSDNA - FIRST STRAND
3
syn
polymer
6822.412
DNA(5'-D(*AP*GP*AP*TP*TP*GP*CP*AP*TP *TP*GP*AP*GP*TP*GP*CP*AP*CP*GP*GP*TP*T)-3')
22BP SSDNA - SECOND STRAND
3
syn
polymer
18.015
water
101
nat
water
REPA PROTEIN
no
no
MKKRLTITLSESVLENLEKMAREMGLSKSAMISVALENYKKGQEK
MKKRLTITLSESVLENLEKMAREMGLSKSAMISVALENYKKGQEK
A,B,D,E,F,G,H,J,K,L
polypeptide(L)
no
no
(DT)(DA)(DA)(DC)(DC)(DG)(DT)(DG)(DC)(DA)(DC)(DT)(DC)(DA)(DA)(DT)(DG)(DC)(DA)(DA)
(DT)(DC)
TAACCGTGCACTCAATGCAATC
U,W,Y
polydeoxyribonucleotide
no
no
(DA)(DG)(DA)(DT)(DT)(DG)(DC)(DA)(DT)(DT)(DG)(DA)(DG)(DT)(DG)(DC)(DA)(DC)(DG)(DG)
(DT)(DT)
AGATTGCATTGAGTGCACGGTT
V,X,Z
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
PLASMID PMV158
1311
STREPTOCOCCUS AGALACTIAE
562
ESCHERICHIA COLI
PLASMID
PMV158
1
2.23
44.94
ONE COPG DIMER/ 9BP DSDNA MODEL WAS USED AS SEARCHING MODEL.
4.60
MPD, NACL, NAACO, pH 4.60
-7.761
1
19
U
204
V
220
-2.131
U_DC204:DG220_V
1
10.592
-0.276
-0.214
-0.269
-21.349
1
19
U
205
V
219
-0.721
U_DC205:DG219_V
2
-1.438
-0.165
-0.258
0.011
-8.363
U
206
V
218
4.980
U_DG206:DC218_V
3
1.304
0.068
0.653
0.838
2.897
1
20
U
207
V
217
7.906
U_DT207:DA217_V
4
19.711
0.353
-0.135
0.374
-2.007
1
19
U
208
V
216
5.016
U_DG208:DC216_V
5
-9.703
0.638
-0.271
0.156
5.372
1
19
U
209
V
215
6.797
U_DC209:DG215_V
6
-6.276
1.337
-0.416
0.256
8.755
1
20
U
210
V
214
-12.960
U_DA210:DT214_V
7
-1.567
-0.016
-0.778
-0.226
2.032
1
U
211
V
213
11.612
U_DC211:DG213_V
8
12.350
-0.576
0.046
0.760
18.000
U
212
V
212
7.744
U_DT212:DA212_V
9
-7.954
0.331
-0.131
0.617
14.271
1
19
U
213
V
211
4.566
U_DC213:DG211_V
10
-23.093
-0.413
-0.122
0.297
-12.952
1
20
U
214
V
210
-3.590
U_DA214:DT210_V
11
-4.252
-0.152
0.130
0.135
-3.375
1
20
U
215
V
209
2.670
U_DA215:DT209_V
12
4.135
0.278
-0.115
0.336
12.025
1
20
U
216
V
208
0.581
U_DT216:DA208_V
13
6.029
0.026
-0.737
0.247
-6.135
1
19
U
217
V
207
1.645
U_DG217:DC207_V
14
-7.809
-0.290
-0.776
0.492
6.418
1
19
U
218
V
206
3.459
U_DC218:DG206_V
15
-3.383
-0.921
-0.378
0.343
27.958
1
20
U
219
V
205
6.603
U_DA219:DT205_V
16
1.363
0.035
0.063
0.162
15.233
1
20
U
220
V
204
-10.007
U_DA220:DT204_V
17
-8.364
1.443
1.644
-0.221
13.463
1
20
W
203
X
221
-2.495
W_DA203:DT221_X
18
1.326
0.259
0.523
0.081
22.463
1
19
W
204
X
220
-1.237
W_DC204:DG220_X
19
-8.921
-0.061
-0.738
-0.062
-10.658
1
19
W
205
X
219
2.884
W_DC205:DG219_X
20
-1.978
0.038
-0.373
0.137
-0.654
1
19
W
206
X
218
-5.034
W_DG206:DC218_X
21
-4.245
0.017
0.813
0.071
-0.231
1
20
W
207
X
217
0.733
W_DT207:DA217_X
22
7.413
-0.089
0.939
-0.168
12.547
1
19
W
208
X
216
2.627
W_DG208:DC216_X
23
9.106
0.023
0.320
0.152
-9.137
1
19
W
209
X
215
-2.266
W_DC209:DG215_X
24
9.241
0.088
0.542
0.056
-13.378
1
20
W
210
X
214
-5.195
W_DA210:DT214_X
25
2.137
0.030
-0.741
0.073
12.716
1
19
W
211
X
213
1.683
W_DC211:DG213_X
26
-0.107
0.064
-0.412
0.275
17.356
1
20
W
212
X
212
0.047
W_DT212:DA212_X
27
-3.141
0.010
0.043
0.015
12.530
1
19
W
213
X
211
2.478
W_DC213:DG211_X
28
-15.893
0.090
-0.613
0.011
-14.466
1
20
W
214
X
210
-0.388
W_DA214:DT210_X
29
-12.388
0.194
-0.279
0.115
-4.275
1
20
W
215
X
209
-0.332
W_DA215:DT209_X
30
6.670
0.223
0.122
0.051
11.349
1
20
W
216
X
208
-2.951
W_DT216:DA208_X
31
-5.270
-0.033
-0.969
0.079
-0.499
1
19
W
217
X
207
-1.013
W_DG217:DC207_X
32
-5.444
0.043
-0.206
0.107
-2.514
1
19
W
218
X
206
0.045
W_DC218:DG206_X
33
2.844
0.004
0.508
-0.136
-11.768
1
20
W
219
X
205
4.631
W_DA219:DT205_X
34
14.032
-0.041
-0.118
-0.174
1.448
1
20
W
220
X
204
-9.357
W_DA220:DT204_X
35
-0.199
0.140
0.961
0.011
5.223
1
20
W
221
X
203
-2.742
W_DT221:DA203_X
36
-9.713
0.120
0.160
-0.076
12.474
1
19
W
222
X
202
-0.652
W_DC222:DG202_X
37
-13.542
-0.050
-0.179
-0.003
-5.523
Z
201
Z
221
-17.702
Z_DA201:DT221_Z
38
-10.055
1.107
-1.130
-0.705
-2.819
1
4
Z
202
Z
220
-0.371
Z_DG202:DG220_Z
39
-3.806
0.026
-0.197
-0.067
-12.871
5
Z
203
Z
219
2.812
Z_DA203:DG219_Z
40
-0.987
0.208
-0.076
0.020
-5.383
5
Y
206
Y
220
-1.677
Y_DG206:DA220_Y
41
-1.279
-0.092
0.482
0.246
7.591
1
20
Z
205
Z
217
5.101
Z_DT205:DA217_Z
42
-9.017
-0.033
-1.124
-0.123
3.235
1
20
Y
207
Y
219
5.140
Y_DT207:DA219_Y
43
-5.826
0.003
-0.830
-0.102
4.223
1
19
Z
206
Z
216
0.550
Z_DG206:DC216_Z
44
-1.028
-0.110
-0.389
0.021
1.778
1
19
Y
208
Y
218
0.584
Y_DG208:DC218_Y
45
-2.121
-0.046
-0.420
-0.054
5.009
1
19
Z
207
Z
215
-4.583
Z_DC207:DG215_Z
46
2.360
-0.166
-0.336
-0.063
3.515
1
19
Y
209
Y
217
-4.648
Y_DC209:DG217_Y
47
0.320
-0.185
-0.344
-0.047
-4.903
1
20
Y
210
Y
216
-3.052
Y_DA210:DT216_Y
48
6.429
0.142
-0.721
-0.088
-7.110
1
20
Z
208
Z
214
-3.016
Z_DA208:DT214_Z
49
5.873
0.154
-0.916
-0.072
3.870
1
Y
211
Y
215
3.199
Y_DC211:DA215_Y
50
-10.247
0.268
-0.572
0.040
-5.819
1
Z
209
Z
213
2.137
Z_DT209:DG213_Z
51
-10.705
-0.156
-0.378
-0.045
12.493
1
20
Y
212
Y
214
1.913
Y_DT212:DA214_Y
52
-17.360
0.036
-0.130
-0.094
12.019
1
20
Z
210
Z
212
0.985
Z_DT210:DA212_Z
53
-15.805
0.158
-0.227
-0.073
3.917
34.795
U
U
204
205
-8.192
V
V
220
219
3.871
-4.883
-0.443
-0.670
UU_DC204DC205:DG219DG220_VV
1
0.689
-1.156
34.454
-0.230
0.867
3.012
39.507
U
U
205
206
1.630
V
V
219
218
3.040
1.096
-0.141
-0.060
UU_DC205DG206:DC218DG219_VV
2
-7.533
11.209
38.796
-0.209
-0.619
3.337
35.610
U
U
206
207
-6.990
V
V
218
217
3.270
-4.255
1.212
0.274
UU_DG206DT207:DA217DC218_VV
3
4.411
-7.247
35.096
1.078
-1.328
3.387
36.016
U
U
207
208
13.847
V
V
217
216
3.374
8.455
-0.848
1.151
UU_DT207DG208:DC216DA217_VV
4
5.409
-8.858
34.634
0.593
2.183
2.828
37.735
U
U
208
209
9.636
V
V
216
215
2.879
6.204
-0.445
0.030
UU_DG208DC209:DG215DC216_VV
5
1.529
-2.375
37.210
-0.659
0.861
2.418
29.525
U
U
209
210
24.401
V
V
215
214
3.105
12.001
-0.017
-0.900
UU_DC209DA210:DT214DG215_VV
6
5.895
-11.987
26.384
-4.048
1.155
2.564
26.224
U
U
210
211
25.534
V
V
214
213
3.629
11.079
0.754
-0.943
UU_DA210DC211:DG213DT214_VV
7
-7.016
16.170
22.759
-5.121
-3.589
2.894
37.502
U
U
211
212
6.455
V
V
213
212
2.931
4.136
-0.505
0.383
UU_DC211DT212:DA212DG213_VV
8
3.666
-5.722
37.107
0.112
1.215
3.136
36.829
U
U
212
213
-7.939
V
V
212
211
3.217
-4.998
0.301
0.501
UU_DT212DC213:DG211DA212_VV
9
2.470
-3.924
36.420
1.456
-0.149
3.883
50.205
U
U
213
214
-15.170
V
V
211
210
4.320
-12.740
-0.113
1.306
UU_DC213DA214:DT210DG211_VV
10
-3.231
3.847
48.562
2.710
-0.163
3.020
34.136
U
U
214
215
13.022
V
V
210
209
3.108
7.584
0.136
-0.061
UU_DA214DA215:DT209DT210_VV
11
-0.279
0.478
33.306
-1.243
-0.273
2.658
28.117
U
U
215
216
14.054
V
V
209
208
2.853
6.741
0.354
-0.577
UU_DA215DT216:DA208DT209_VV
12
4.009
-8.358
27.022
-2.548
0.080
2.996
37.039
U
U
216
217
31.264
V
V
208
207
3.618
18.968
-0.991
-0.365
UU_DT216DG217:DC207DA208_VV
13
-1.778
2.931
31.912
-3.358
1.300
2.713
28.110
U
U
217
218
2.258
V
V
207
206
2.822
1.092
0.339
-0.662
UU_DG217DC218:DG206DC207_VV
14
-4.252
8.788
27.772
-1.581
-1.548
3.032
39.036
U
U
218
219
8.151
V
V
206
205
2.851
5.425
0.726
1.207
UU_DC218DA219:DT205DG206_VV
15
3.001
-4.509
38.559
1.214
-0.759
4.314
42.934
U
U
219
220
-1.652
V
V
205
204
4.142
-1.201
-1.334
0.354
UU_DA219DA220:DT204DT205_VV
16
-9.015
12.403
42.004
0.639
0.653
3.137
32.789
W
W
203
204
6.744
X
X
221
220
3.226
3.728
0.296
0.128
WW_DA203DC204:DG220DT221_XX
17
11.028
-19.948
30.706
-0.419
1.385
3.536
36.061
W
W
204
205
23.585
X
X
220
219
4.069
14.228
0.150
-0.575
WW_DC204DC205:DG219DG220_XX
18
-0.330
0.548
33.220
-3.377
-0.299
3.480
36.580
W
W
205
206
-5.643
X
X
219
218
3.426
-3.527
-0.587
-0.231
WW_DC205DG206:DC218DG219_XX
19
-4.940
7.905
36.089
0.148
0.213
3.493
35.056
W
W
206
207
-0.857
X
X
218
217
3.347
-0.516
1.754
-0.046
WW_DG206DT207:DA217DC218_XX
20
3.280
-5.453
34.903
0.005
-2.396
2.939
35.222
W
W
207
208
4.159
X
X
217
216
2.918
2.513
-0.189
0.693
WW_DT207DG208:DC216DA217_XX
21
2.511
-4.157
35.048
0.810
0.647
3.320
37.175
W
W
208
209
20.832
X
X
216
215
3.831
13.013
-0.762
-0.926
WW_DG208DC209:DG215DC216_XX
22
-1.700
2.721
34.859
-3.413
0.940
3.067
36.048
W
W
209
210
16.174
X
X
215
214
3.420
9.784
0.521
-0.953
WW_DC209DA210:DT214DG215_XX
23
9.117
-15.070
33.552
-2.970
0.491
2.604
25.626
W
W
210
211
2.090
X
X
214
213
2.617
0.927
-0.143
-0.365
WW_DA210DC211:DG213DT214_XX
24
-0.446
1.006
25.606
-1.033
0.221
3.274
35.514
W
W
211
212
11.067
X
X
213
212
3.332
6.706
-0.490
-0.157
WW_DC211DT212:DA212DG213_XX
25
-2.703
4.461
34.793
-1.258
0.399
3.351
41.737
W
W
212
213
-11.543
X
X
212
211
3.414
-8.126
0.985
0.680
WW_DT212DC213:DG211DA212_XX
26
8.234
-11.698
40.171
1.857
-0.468
3.848
45.391
W
W
213
214
-9.686
X
X
211
210
4.105
-7.444
0.004
1.330
WW_DC213DA214:DT210DG211_XX
27
0.285
-0.371
44.807
2.530
0.026
2.858
33.257
W
W
214
215
17.215
X
X
210
209
3.022
9.686
-0.038
-0.056
WW_DA214DA215:DT209DT210_XX
28
-4.597
8.171
31.528
-1.594
-0.643
2.992
27.942
W
W
215
216
8.509
X
X
209
208
3.075
4.031
0.584
-0.600
WW_DA215DT216:DA208DT209_XX
29
8.509
-17.961
26.337
-2.158
0.724
3.085
35.622
W
W
216
217
23.340
X
X
208
207
3.446
13.868
-0.701
-0.440
WW_DT216DG217:DC207DA208_XX
30
-5.308
8.933
32.470
-2.832
0.338
3.188
33.938
W
W
217
218
4.596
X
X
207
206
3.320
2.677
0.582
-0.865
WW_DG217DC218:DG206DC207_XX
31
-2.748
4.717
33.726
-1.911
-1.437
3.802
37.787
W
W
218
219
23.462
X
X
206
205
3.733
14.780
1.019
0.681
WW_DC218DA219:DT205DG206_XX
32
4.470
-7.095
34.594
-1.248
-0.878
3.450
36.450
W
W
219
220
-9.087
X
X
205
204
3.219
-5.610
-1.992
0.717
WW_DA219DA220:DT204DT205_XX
33
-8.732
14.144
34.989
1.958
1.923
3.395
35.921
W
W
220
221
-2.872
X
X
204
203
3.253
-1.756
0.778
-1.141
WW_DA220DT221:DA203DT204_XX
34
8.023
-13.118
35.000
-1.591
-0.081
2.771
36.727
W
W
221
222
8.700
X
X
203
202
2.840
5.435
0.498
-0.578
WW_DT221DC222:DG202DA203_XX
35
6.551
-10.486
35.760
-1.563
-0.012
2.833
29.031
Z
Z
201
202
21.007
Z
Z
221
220
3.215
10.180
0.814
0.442
ZZ_DA201DG202:DG220DT221_ZZ
36
-7.827
16.152
26.091
-1.305
-3.305
3.583
39.492
Z
Z
202
203
-0.409
Z
Z
220
219
3.565
-0.275
-0.359
-0.375
ZZ_DG202DA203:DG219DG220_ZZ
37
-5.699
8.461
39.094
-0.519
-0.206
3.389
35.739
Z
Y
203
206
-7.004
Z
Y
219
220
3.314
-4.272
-0.455
-0.575
ZY_DA203DG206:DA220DG219_YZ
38
-5.611
9.200
35.058
-0.299
-0.097
3.381
40.023
Y
Z
206
205
-1.655
Y
Z
220
217
3.039
-1.098
1.541
0.861
YZ_DG206DT205:DA217DA220_ZY
39
17.323
-26.112
36.203
1.389
-0.195
-0.013
-2.597
Z
Y
205
207
-47.850
Z
Y
217
219
0.119
1.427
-0.018
0.007
ZY_DT205DT207:DA219DA217_YZ
40
-2.165
-72.561
-0.140
-1.379
-2.257
3.660
34.376
Y
Z
207
206
19.094
Y
Z
219
216
3.304
11.065
-0.781
1.443
YZ_DT207DG206:DC216DA219_ZY
41
-4.397
7.588
32.307
0.540
0.565
-0.014
-1.173
Z
Y
206
208
-88.547
Z
Y
216
218
0.081
1.166
-0.003
0.015
ZY_DG206DG208:DC218DC216_YZ
42
0.123
9.339
-0.020
-3.962
0.197
2.866
34.474
Y
Z
208
207
14.828
Y
Z
218
215
3.109
8.690
-0.554
-0.736
YZ_DG208DC207:DG215DC218_ZY
43
-2.622
4.473
33.293
-2.497
0.555
0.008
0.790
Z
Y
207
209
66.502
Z
Y
215
217
0.032
0.617
0.007
0.001
ZY_DC207DC209:DG217DG215_YZ
44
0.489
-52.702
0.071
-1.993
1.142
3.116
35.148
Y
Y
209
210
19.484
Y
Y
217
216
3.405
11.544
0.988
-0.579
YY_DC209DA210:DT216DG217_YY
45
3.257
-5.498
33.099
-2.733
-1.136
0.007
-1.195
Y
Z
210
208
-62.200
Y
Z
216
214
0.083
0.921
0.005
0.007
YZ_DA210DA208:DT214DT216_ZY
46
0.729
49.231
-0.221
-3.109
2.460
2.824
28.501
Z
Y
208
211
20.052
Z
Y
214
215
3.188
9.678
-0.411
-0.455
ZY_DA208DC211:DA215DT214_YZ
47
1.678
-3.478
26.788
-3.021
1.199
0.129
-4.157
Y
Z
211
209
-54.058
Y
Z
215
213
0.310
3.264
-0.081
0.004
YZ_DC211DT209:DG213DA215_ZY
48
-1.435
-23.772
-2.139
-3.188
-2.492
2.899
34.488
Z
Y
209
212
4.775
Z
Y
213
214
2.881
2.828
-0.154
0.311
ZY_DT209DT212:DA214DG213_YZ
49
-0.512
0.864
34.372
0.136
0.190
0.003
-0.689
Y
Z
212
210
-14.474
Y
Z
214
212
0.016
0.142
0.008
-0.009
YZ_DT212DT210:DA212DA214_ZY
50
0.592
60.330
-0.323
0.559
1.567
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Refinement description
1
0
2001-07-05
1
1
2011-05-08
1
2
2011-07-13
1
3
2023-12-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq.db_align_beg
TRANSCRIPTIONAL REPRESSOR COPG/DEOXYRIBONUCLEIC ACID COMPLEX
TRANSCRIPTIONAL REPRESSOR COPG
PDBE
Y
PDBE
2000-11-05
REL
1
H
O
HOH
2002
6.57
1
Y
O
HOH
2001
6.26
1
Y
O
HOH
2002
6.55
HOH
water
REGULATES THE PLASMID COPY NUMBER BY BINDING TO THE
REPAB PROMOTER THUS CONTROLING THE SYNTHESIS OF THE PLASMID
REPLICATION INITIATOR PROTEIN REPB AND ITS OWN ONE.
1B01
PDB ENTRY 1B01
PDB
experimental model
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2001
4
HOH
HOH
2001
B
HOH
2002
4
HOH
HOH
2002
B
HOH
2003
4
HOH
HOH
2003
B
HOH
2001
4
HOH
HOH
2001
D
HOH
2002
4
HOH
HOH
2002
D
HOH
2003
4
HOH
HOH
2003
D
HOH
2004
4
HOH
HOH
2004
D
HOH
2005
4
HOH
HOH
2005
D
HOH
2006
4
HOH
HOH
2006
D
HOH
2007
4
HOH
HOH
2007
D
HOH
2008
4
HOH
HOH
2008
D
HOH
2001
4
HOH
HOH
2001
E
HOH
2002
4
HOH
HOH
2002
E
HOH
2003
4
HOH
HOH
2003
E
HOH
2004
4
HOH
HOH
2004
E
HOH
2005
4
HOH
HOH
2005
E
HOH
2001
4
HOH
HOH
2001
F
HOH
2002
4
HOH
HOH
2002
F
HOH
2003
4
HOH
HOH
2003
F
HOH
2004
4
HOH
HOH
2004
F
HOH
2005
4
HOH
HOH
2005
F
HOH
2006
4
HOH
HOH
2006
F
HOH
2001
4
HOH
HOH
2001
G
HOH
2002
4
HOH
HOH
2002
G
HOH
2003
4
HOH
HOH
2003
G
HOH
2004
4
HOH
HOH
2004
G
HOH
2005
4
HOH
HOH
2005
G
HOH
2001
4
HOH
HOH
2001
H
HOH
2002
4
HOH
HOH
2002
H
HOH
2003
4
HOH
HOH
2003
H
HOH
2004
4
HOH
HOH
2004
H
HOH
2001
4
HOH
HOH
2001
J
HOH
2002
4
HOH
HOH
2002
J
HOH
2003
4
HOH
HOH
2003
J
HOH
2004
4
HOH
HOH
2004
J
HOH
2005
4
HOH
HOH
2005
J
HOH
2001
4
HOH
HOH
2001
K
HOH
2002
4
HOH
HOH
2002
K
HOH
2003
4
HOH
HOH
2003
K
HOH
2004
4
HOH
HOH
2004
K
HOH
2005
4
HOH
HOH
2005
K
HOH
2006
4
HOH
HOH
2006
K
HOH
2001
4
HOH
HOH
2001
L
HOH
2002
4
HOH
HOH
2002
L
HOH
2003
4
HOH
HOH
2003
L
HOH
2004
4
HOH
HOH
2004
L
HOH
2005
4
HOH
HOH
2005
L
HOH
2006
4
HOH
HOH
2006
L
HOH
2001
4
HOH
HOH
2001
U
HOH
2002
4
HOH
HOH
2002
U
HOH
2003
4
HOH
HOH
2003
U
HOH
2004
4
HOH
HOH
2004
U
HOH
2005
4
HOH
HOH
2005
U
HOH
2006
4
HOH
HOH
2006
U
HOH
2007
4
HOH
HOH
2007
U
HOH
2008
4
HOH
HOH
2008
U
HOH
2009
4
HOH
HOH
2009
U
HOH
2010
4
HOH
HOH
2010
U
HOH
2011
4
HOH
HOH
2011
U
HOH
2001
4
HOH
HOH
2001
V
HOH
2002
4
HOH
HOH
2002
V
HOH
2003
4
HOH
HOH
2003
V
HOH
2004
4
HOH
HOH
2004
V
HOH
2005
4
HOH
HOH
2005
V
HOH
2006
4
HOH
HOH
2006
V
HOH
2007
4
HOH
HOH
2007
V
HOH
2008
4
HOH
HOH
2008
V
HOH
2009
4
HOH
HOH
2009
V
HOH
2001
4
HOH
HOH
2001
W
HOH
2002
4
HOH
HOH
2002
W
HOH
2001
4
HOH
HOH
2001
X
HOH
2002
4
HOH
HOH
2002
X
HOH
2003
4
HOH
HOH
2003
X
HOH
2004
4
HOH
HOH
2004
X
HOH
2005
4
HOH
HOH
2005
X
HOH
2006
4
HOH
HOH
2006
X
HOH
2007
4
HOH
HOH
2007
X
HOH
2008
4
HOH
HOH
2008
X
HOH
2001
4
HOH
HOH
2001
Y
HOH
2002
4
HOH
HOH
2002
Y
HOH
2003
4
HOH
HOH
2003
Y
HOH
2004
4
HOH
HOH
2004
Y
HOH
2005
4
HOH
HOH
2005
Y
HOH
2006
4
HOH
HOH
2006
Y
HOH
2007
4
HOH
HOH
2007
Y
HOH
2008
4
HOH
HOH
2008
Y
HOH
2009
4
HOH
HOH
2009
Y
HOH
2001
4
HOH
HOH
2001
Z
HOH
2002
4
HOH
HOH
2002
Z
HOH
2003
4
HOH
HOH
2003
Z
n
1
1
A
LYS
2
n
2
LYS
2
A
LYS
3
n
3
LYS
3
A
ARG
4
n
4
ARG
4
A
LEU
5
n
5
LEU
5
A
THR
6
n
6
THR
6
A
ILE
7
n
7
ILE
7
A
THR
8
n
8
THR
8
A
LEU
9
n
9
LEU
9
A
SER
10
n
10
SER
10
A
GLU
11
n
11
GLU
11
A
SER
12
n
12
SER
12
A
VAL
13
n
13
VAL
13
A
LEU
14
n
14
LEU
14
A
GLU
15
n
15
GLU
15
A
ASN
16
n
16
ASN
16
A
LEU
17
n
17
LEU
17
A
GLU
18
n
18
GLU
18
A
LYS
19
n
19
LYS
19
A
MET
20
n
20
MET
20
A
ALA
21
n
21
ALA
21
A
ARG
22
n
22
ARG
22
A
GLU
23
n
23
GLU
23
A
MET
24
n
24
MET
24
A
GLY
25
n
25
GLY
25
A
LEU
26
n
26
LEU
26
A
SER
27
n
27
SER
27
A
LYS
28
n
28
LYS
28
A
SER
29
n
29
SER
29
A
ALA
30
n
30
ALA
30
A
MET
31
n
31
MET
31
A
ILE
32
n
32
ILE
32
A
SER
33
n
33
SER
33
A
VAL
34
n
34
VAL
34
A
ALA
35
n
35
ALA
35
A
LEU
36
n
36
LEU
36
A
GLU
37
n
37
GLU
37
A
ASN
38
n
38
ASN
38
A
TYR
39
n
39
TYR
39
A
LYS
40
n
40
LYS
40
A
LYS
41
n
41
LYS
41
A
GLY
42
n
42
GLY
42
A
GLN
43
n
43
GLN
43
A
n
44
44
A
n
45
45
A
MET
1
n
1
MET
1
B
LYS
2
n
2
LYS
2
B
LYS
3
n
3
LYS
3
B
ARG
4
n
4
ARG
4
B
LEU
5
n
5
LEU
5
B
THR
6
n
6
THR
6
B
ILE
7
n
7
ILE
7
B
THR
8
n
8
THR
8
B
LEU
9
n
9
LEU
9
B
SER
10
n
10
SER
10
B
GLU
11
n
11
GLU
11
B
SER
12
n
12
SER
12
B
VAL
13
n
13
VAL
13
B
LEU
14
n
14
LEU
14
B
GLU
15
n
15
GLU
15
B
ASN
16
n
16
ASN
16
B
LEU
17
n
17
LEU
17
B
GLU
18
n
18
GLU
18
B
LYS
19
n
19
LYS
19
B
MET
20
n
20
MET
20
B
ALA
21
n
21
ALA
21
B
ARG
22
n
22
ARG
22
B
GLU
23
n
23
GLU
23
B
MET
24
n
24
MET
24
B
GLY
25
n
25
GLY
25
B
LEU
26
n
26
LEU
26
B
SER
27
n
27
SER
27
B
LYS
28
n
28
LYS
28
B
SER
29
n
29
SER
29
B
ALA
30
n
30
ALA
30
B
MET
31
n
31
MET
31
B
ILE
32
n
32
ILE
32
B
SER
33
n
33
SER
33
B
VAL
34
n
34
VAL
34
B
ALA
35
n
35
ALA
35
B
LEU
36
n
36
LEU
36
B
GLU
37
n
37
GLU
37
B
ASN
38
n
38
ASN
38
B
TYR
39
n
39
TYR
39
B
LYS
40
n
40
LYS
40
B
LYS
41
n
41
LYS
41
B
n
42
42
B
n
43
43
B
n
44
44
B
n
45
45
B
MET
1
n
1
MET
1
D
LYS
2
n
2
LYS
2
D
LYS
3
n
3
LYS
3
D
ARG
4
n
4
ARG
4
D
LEU
5
n
5
LEU
5
D
THR
6
n
6
THR
6
D
ILE
7
n
7
ILE
7
D
THR
8
n
8
THR
8
D
LEU
9
n
9
LEU
9
D
SER
10
n
10
SER
10
D
GLU
11
n
11
GLU
11
D
SER
12
n
12
SER
12
D
VAL
13
n
13
VAL
13
D
LEU
14
n
14
LEU
14
D
GLU
15
n
15
GLU
15
D
ASN
16
n
16
ASN
16
D
LEU
17
n
17
LEU
17
D
GLU
18
n
18
GLU
18
D
LYS
19
n
19
LYS
19
D
MET
20
n
20
MET
20
D
ALA
21
n
21
ALA
21
D
ARG
22
n
22
ARG
22
D
GLU
23
n
23
GLU
23
D
MET
24
n
24
MET
24
D
GLY
25
n
25
GLY
25
D
LEU
26
n
26
LEU
26
D
SER
27
n
27
SER
27
D
LYS
28
n
28
LYS
28
D
SER
29
n
29
SER
29
D
ALA
30
n
30
ALA
30
D
MET
31
n
31
MET
31
D
ILE
32
n
32
ILE
32
D
SER
33
n
33
SER
33
D
VAL
34
n
34
VAL
34
D
ALA
35
n
35
ALA
35
D
LEU
36
n
36
LEU
36
D
GLU
37
n
37
GLU
37
D
ASN
38
n
38
ASN
38
D
TYR
39
n
39
TYR
39
D
LYS
40
n
40
LYS
40
D
LYS
41
n
41
LYS
41
D
GLY
42
n
42
GLY
42
D
GLN
43
n
43
GLN
43
D
n
44
44
D
n
45
45
D
MET
1
n
1
MET
1
E
LYS
2
n
2
LYS
2
E
LYS
3
n
3
LYS
3
E
ARG
4
n
4
ARG
4
E
LEU
5
n
5
LEU
5
E
THR
6
n
6
THR
6
E
ILE
7
n
7
ILE
7
E
THR
8
n
8
THR
8
E
LEU
9
n
9
LEU
9
E
SER
10
n
10
SER
10
E
GLU
11
n
11
GLU
11
E
SER
12
n
12
SER
12
E
VAL
13
n
13
VAL
13
E
LEU
14
n
14
LEU
14
E
GLU
15
n
15
GLU
15
E
ASN
16
n
16
ASN
16
E
LEU
17
n
17
LEU
17
E
GLU
18
n
18
GLU
18
E
LYS
19
n
19
LYS
19
E
MET
20
n
20
MET
20
E
ALA
21
n
21
ALA
21
E
ARG
22
n
22
ARG
22
E
GLU
23
n
23
GLU
23
E
MET
24
n
24
MET
24
E
GLY
25
n
25
GLY
25
E
LEU
26
n
26
LEU
26
E
SER
27
n
27
SER
27
E
LYS
28
n
28
LYS
28
E
SER
29
n
29
SER
29
E
ALA
30
n
30
ALA
30
E
MET
31
n
31
MET
31
E
ILE
32
n
32
ILE
32
E
SER
33
n
33
SER
33
E
VAL
34
n
34
VAL
34
E
ALA
35
n
35
ALA
35
E
LEU
36
n
36
LEU
36
E
GLU
37
n
37
GLU
37
E
ASN
38
n
38
ASN
38
E
TYR
39
n
39
TYR
39
E
LYS
40
n
40
LYS
40
E
LYS
41
n
41
LYS
41
E
GLY
42
n
42
GLY
42
E
GLN
43
n
43
GLN
43
E
GLU
44
n
44
GLU
44
E
n
45
45
E
MET
1
n
1
MET
1
F
LYS
2
n
2
LYS
2
F
LYS
3
n
3
LYS
3
F
ARG
4
n
4
ARG
4
F
LEU
5
n
5
LEU
5
F
THR
6
n
6
THR
6
F
ILE
7
n
7
ILE
7
F
THR
8
n
8
THR
8
F
LEU
9
n
9
LEU
9
F
SER
10
n
10
SER
10
F
GLU
11
n
11
GLU
11
F
SER
12
n
12
SER
12
F
VAL
13
n
13
VAL
13
F
LEU
14
n
14
LEU
14
F
GLU
15
n
15
GLU
15
F
ASN
16
n
16
ASN
16
F
LEU
17
n
17
LEU
17
F
GLU
18
n
18
GLU
18
F
LYS
19
n
19
LYS
19
F
MET
20
n
20
MET
20
F
ALA
21
n
21
ALA
21
F
ARG
22
n
22
ARG
22
F
GLU
23
n
23
GLU
23
F
MET
24
n
24
MET
24
F
GLY
25
n
25
GLY
25
F
LEU
26
n
26
LEU
26
F
SER
27
n
27
SER
27
F
LYS
28
n
28
LYS
28
F
SER
29
n
29
SER
29
F
ALA
30
n
30
ALA
30
F
MET
31
n
31
MET
31
F
ILE
32
n
32
ILE
32
F
SER
33
n
33
SER
33
F
VAL
34
n
34
VAL
34
F
ALA
35
n
35
ALA
35
F
LEU
36
n
36
LEU
36
F
GLU
37
n
37
GLU
37
F
ASN
38
n
38
ASN
38
F
TYR
39
n
39
TYR
39
F
LYS
40
n
40
LYS
40
F
LYS
41
n
41
LYS
41
F
GLY
42
n
42
GLY
42
F
GLN
43
n
43
GLN
43
F
GLU
44
n
44
GLU
44
F
LYS
45
n
45
LYS
45
F
MET
1
n
1
MET
1
G
LYS
2
n
2
LYS
2
G
LYS
3
n
3
LYS
3
G
ARG
4
n
4
ARG
4
G
LEU
5
n
5
LEU
5
G
THR
6
n
6
THR
6
G
ILE
7
n
7
ILE
7
G
THR
8
n
8
THR
8
G
LEU
9
n
9
LEU
9
G
SER
10
n
10
SER
10
G
GLU
11
n
11
GLU
11
G
SER
12
n
12
SER
12
G
VAL
13
n
13
VAL
13
G
LEU
14
n
14
LEU
14
G
GLU
15
n
15
GLU
15
G
ASN
16
n
16
ASN
16
G
LEU
17
n
17
LEU
17
G
GLU
18
n
18
GLU
18
G
LYS
19
n
19
LYS
19
G
MET
20
n
20
MET
20
G
ALA
21
n
21
ALA
21
G
ARG
22
n
22
ARG
22
G
GLU
23
n
23
GLU
23
G
MET
24
n
24
MET
24
G
GLY
25
n
25
GLY
25
G
LEU
26
n
26
LEU
26
G
SER
27
n
27
SER
27
G
LYS
28
n
28
LYS
28
G
SER
29
n
29
SER
29
G
ALA
30
n
30
ALA
30
G
MET
31
n
31
MET
31
G
ILE
32
n
32
ILE
32
G
SER
33
n
33
SER
33
G
VAL
34
n
34
VAL
34
G
ALA
35
n
35
ALA
35
G
LEU
36
n
36
LEU
36
G
GLU
37
n
37
GLU
37
G
ASN
38
n
38
ASN
38
G
TYR
39
n
39
TYR
39
G
LYS
40
n
40
LYS
40
G
LYS
41
n
41
LYS
41
G
GLY
42
n
42
GLY
42
G
n
43
43
G
n
44
44
G
n
45
45
G
n
1
1
H
LYS
2
n
2
LYS
2
H
LYS
3
n
3
LYS
3
H
ARG
4
n
4
ARG
4
H
LEU
5
n
5
LEU
5
H
THR
6
n
6
THR
6
H
ILE
7
n
7
ILE
7
H
THR
8
n
8
THR
8
H
LEU
9
n
9
LEU
9
H
SER
10
n
10
SER
10
H
GLU
11
n
11
GLU
11
H
SER
12
n
12
SER
12
H
VAL
13
n
13
VAL
13
H
LEU
14
n
14
LEU
14
H
GLU
15
n
15
GLU
15
H
ASN
16
n
16
ASN
16
H
LEU
17
n
17
LEU
17
H
GLU
18
n
18
GLU
18
H
LYS
19
n
19
LYS
19
H
MET
20
n
20
MET
20
H
ALA
21
n
21
ALA
21
H
ARG
22
n
22
ARG
22
H
GLU
23
n
23
GLU
23
H
MET
24
n
24
MET
24
H
GLY
25
n
25
GLY
25
H
LEU
26
n
26
LEU
26
H
SER
27
n
27
SER
27
H
LYS
28
n
28
LYS
28
H
SER
29
n
29
SER
29
H
ALA
30
n
30
ALA
30
H
MET
31
n
31
MET
31
H
ILE
32
n
32
ILE
32
H
SER
33
n
33
SER
33
H
VAL
34
n
34
VAL
34
H
ALA
35
n
35
ALA
35
H
LEU
36
n
36
LEU
36
H
GLU
37
n
37
GLU
37
H
ASN
38
n
38
ASN
38
H
TYR
39
n
39
TYR
39
H
LYS
40
n
40
LYS
40
H
LYS
41
n
41
LYS
41
H
GLY
42
n
42
GLY
42
H
GLN
43
n
43
GLN
43
H
GLU
44
n
44
GLU
44
H
LYS
45
n
45
LYS
45
H
MET
1
n
1
MET
1
J
LYS
2
n
2
LYS
2
J
LYS
3
n
3
LYS
3
J
ARG
4
n
4
ARG
4
J
LEU
5
n
5
LEU
5
J
THR
6
n
6
THR
6
J
ILE
7
n
7
ILE
7
J
THR
8
n
8
THR
8
J
LEU
9
n
9
LEU
9
J
SER
10
n
10
SER
10
J
GLU
11
n
11
GLU
11
J
SER
12
n
12
SER
12
J
VAL
13
n
13
VAL
13
J
LEU
14
n
14
LEU
14
J
GLU
15
n
15
GLU
15
J
ASN
16
n
16
ASN
16
J
LEU
17
n
17
LEU
17
J
GLU
18
n
18
GLU
18
J
LYS
19
n
19
LYS
19
J
MET
20
n
20
MET
20
J
ALA
21
n
21
ALA
21
J
ARG
22
n
22
ARG
22
J
GLU
23
n
23
GLU
23
J
MET
24
n
24
MET
24
J
GLY
25
n
25
GLY
25
J
LEU
26
n
26
LEU
26
J
SER
27
n
27
SER
27
J
LYS
28
n
28
LYS
28
J
SER
29
n
29
SER
29
J
ALA
30
n
30
ALA
30
J
MET
31
n
31
MET
31
J
ILE
32
n
32
ILE
32
J
SER
33
n
33
SER
33
J
VAL
34
n
34
VAL
34
J
ALA
35
n
35
ALA
35
J
LEU
36
n
36
LEU
36
J
GLU
37
n
37
GLU
37
J
ASN
38
n
38
ASN
38
J
TYR
39
n
39
TYR
39
J
LYS
40
n
40
LYS
40
J
LYS
41
n
41
LYS
41
J
GLY
42
n
42
GLY
42
J
GLN
43
n
43
GLN
43
J
GLU
44
n
44
GLU
44
J
n
45
45
J
MET
1
n
1
MET
1
K
LYS
2
n
2
LYS
2
K
LYS
3
n
3
LYS
3
K
ARG
4
n
4
ARG
4
K
LEU
5
n
5
LEU
5
K
THR
6
n
6
THR
6
K
ILE
7
n
7
ILE
7
K
THR
8
n
8
THR
8
K
LEU
9
n
9
LEU
9
K
SER
10
n
10
SER
10
K
GLU
11
n
11
GLU
11
K
SER
12
n
12
SER
12
K
VAL
13
n
13
VAL
13
K
LEU
14
n
14
LEU
14
K
GLU
15
n
15
GLU
15
K
ASN
16
n
16
ASN
16
K
LEU
17
n
17
LEU
17
K
GLU
18
n
18
GLU
18
K
LYS
19
n
19
LYS
19
K
MET
20
n
20
MET
20
K
ALA
21
n
21
ALA
21
K
ARG
22
n
22
ARG
22
K
GLU
23
n
23
GLU
23
K
MET
24
n
24
MET
24
K
GLY
25
n
25
GLY
25
K
LEU
26
n
26
LEU
26
K
SER
27
n
27
SER
27
K
LYS
28
n
28
LYS
28
K
SER
29
n
29
SER
29
K
ALA
30
n
30
ALA
30
K
MET
31
n
31
MET
31
K
ILE
32
n
32
ILE
32
K
SER
33
n
33
SER
33
K
VAL
34
n
34
VAL
34
K
ALA
35
n
35
ALA
35
K
LEU
36
n
36
LEU
36
K
GLU
37
n
37
GLU
37
K
ASN
38
n
38
ASN
38
K
TYR
39
n
39
TYR
39
K
LYS
40
n
40
LYS
40
K
LYS
41
n
41
LYS
41
K
GLY
42
n
42
GLY
42
K
GLN
43
n
43
GLN
43
K
n
44
44
K
n
45
45
K
MET
1
n
1
MET
1
L
LYS
2
n
2
LYS
2
L
LYS
3
n
3
LYS
3
L
ARG
4
n
4
ARG
4
L
LEU
5
n
5
LEU
5
L
THR
6
n
6
THR
6
L
ILE
7
n
7
ILE
7
L
THR
8
n
8
THR
8
L
LEU
9
n
9
LEU
9
L
SER
10
n
10
SER
10
L
GLU
11
n
11
GLU
11
L
SER
12
n
12
SER
12
L
VAL
13
n
13
VAL
13
L
LEU
14
n
14
LEU
14
L
GLU
15
n
15
GLU
15
L
ASN
16
n
16
ASN
16
L
LEU
17
n
17
LEU
17
L
GLU
18
n
18
GLU
18
L
LYS
19
n
19
LYS
19
L
MET
20
n
20
MET
20
L
ALA
21
n
21
ALA
21
L
ARG
22
n
22
ARG
22
L
GLU
23
n
23
GLU
23
L
MET
24
n
24
MET
24
L
GLY
25
n
25
GLY
25
L
LEU
26
n
26
LEU
26
L
SER
27
n
27
SER
27
L
LYS
28
n
28
LYS
28
L
SER
29
n
29
SER
29
L
ALA
30
n
30
ALA
30
L
MET
31
n
31
MET
31
L
ILE
32
n
32
ILE
32
L
SER
33
n
33
SER
33
L
VAL
34
n
34
VAL
34
L
ALA
35
n
35
ALA
35
L
LEU
36
n
36
LEU
36
L
GLU
37
n
37
GLU
37
L
ASN
38
n
38
ASN
38
L
TYR
39
n
39
TYR
39
L
LYS
40
n
40
LYS
40
L
LYS
41
n
41
LYS
41
L
GLY
42
n
42
GLY
42
L
GLN
43
n
43
GLN
43
L
GLU
44
n
44
GLU
44
L
n
45
45
L
n
1
201
U
DA
202
n
2
DA
202
U
DA
203
n
3
DA
203
U
DC
204
n
4
DC
204
U
DC
205
n
5
DC
205
U
DG
206
n
6
DG
206
U
DT
207
n
7
DT
207
U
DG
208
n
8
DG
208
U
DC
209
n
9
DC
209
U
DA
210
n
10
DA
210
U
DC
211
n
11
DC
211
U
DT
212
n
12
DT
212
U
DC
213
n
13
DC
213
U
DA
214
n
14
DA
214
U
DA
215
n
15
DA
215
U
DT
216
n
16
DT
216
U
DG
217
n
17
DG
217
U
DC
218
n
18
DC
218
U
DA
219
n
19
DA
219
U
DA
220
n
20
DA
220
U
DT
221
n
21
DT
221
U
n
22
222
U
DA
201
n
1
DA
201
V
DG
202
n
2
DG
202
V
DA
203
n
3
DA
203
V
DT
204
n
4
DT
204
V
DT
205
n
5
DT
205
V
DG
206
n
6
DG
206
V
DC
207
n
7
DC
207
V
DA
208
n
8
DA
208
V
DT
209
n
9
DT
209
V
DT
210
n
10
DT
210
V
DG
211
n
11
DG
211
V
DA
212
n
12
DA
212
V
DG
213
n
13
DG
213
V
DT
214
n
14
DT
214
V
DG
215
n
15
DG
215
V
DC
216
n
16
DC
216
V
DA
217
n
17
DA
217
V
DC
218
n
18
DC
218
V
DG
219
n
19
DG
219
V
DG
220
n
20
DG
220
V
DT
221
n
21
DT
221
V
n
22
222
V
DT
201
n
1
DT
201
W
DA
202
n
2
DA
202
W
DA
203
n
3
DA
203
W
DC
204
n
4
DC
204
W
DC
205
n
5
DC
205
W
DG
206
n
6
DG
206
W
DT
207
n
7
DT
207
W
DG
208
n
8
DG
208
W
DC
209
n
9
DC
209
W
DA
210
n
10
DA
210
W
DC
211
n
11
DC
211
W
DT
212
n
12
DT
212
W
DC
213
n
13
DC
213
W
DA
214
n
14
DA
214
W
DA
215
n
15
DA
215
W
DT
216
n
16
DT
216
W
DG
217
n
17
DG
217
W
DC
218
n
18
DC
218
W
DA
219
n
19
DA
219
W
DA
220
n
20
DA
220
W
DT
221
n
21
DT
221
W
DC
222
n
22
DC
222
W
DA
201
n
1
DA
201
X
DG
202
n
2
DG
202
X
DA
203
n
3
DA
203
X
DT
204
n
4
DT
204
X
DT
205
n
5
DT
205
X
DG
206
n
6
DG
206
X
DC
207
n
7
DC
207
X
DA
208
n
8
DA
208
X
DT
209
n
9
DT
209
X
DT
210
n
10
DT
210
X
DG
211
n
11
DG
211
X
DA
212
n
12
DA
212
X
DG
213
n
13
DG
213
X
DT
214
n
14
DT
214
X
DG
215
n
15
DG
215
X
DC
216
n
16
DC
216
X
DA
217
n
17
DA
217
X
DC
218
n
18
DC
218
X
DG
219
n
19
DG
219
X
DG
220
n
20
DG
220
X
DT
221
n
21
DT
221
X
DT
222
n
22
DT
222
X
n
1
201
Y
DA
202
n
2
DA
202
Y
DA
203
n
3
DA
203
Y
DC
204
n
4
DC
204
Y
DC
205
n
5
DC
205
Y
DG
206
n
6
DG
206
Y
DT
207
n
7
DT
207
Y
DG
208
n
8
DG
208
Y
DC
209
n
9
DC
209
Y
DA
210
n
10
DA
210
Y
DC
211
n
11
DC
211
Y
DT
212
n
12
DT
212
Y
DC
213
n
13
DC
213
Y
DA
214
n
14
DA
214
Y
DA
215
n
15
DA
215
Y
DT
216
n
16
DT
216
Y
DG
217
n
17
DG
217
Y
DC
218
n
18
DC
218
Y
DA
219
n
19
DA
219
Y
DA
220
n
20
DA
220
Y
DT
221
n
21
DT
221
Y
DC
222
n
22
DC
222
Y
DA
201
n
1
DA
201
Z
DG
202
n
2
DG
202
Z
DA
203
n
3
DA
203
Z
DT
204
n
4
DT
204
Z
DT
205
n
5
DT
205
Z
DG
206
n
6
DG
206
Z
DC
207
n
7
DC
207
Z
DA
208
n
8
DA
208
Z
DT
209
n
9
DT
209
Z
DT
210
n
10
DT
210
Z
DG
211
n
11
DG
211
Z
DA
212
n
12
DA
212
Z
DG
213
n
13
DG
213
Z
DT
214
n
14
DT
214
Z
DG
215
n
15
DG
215
Z
DC
216
n
16
DC
216
Z
DA
217
n
17
DA
217
Z
DC
218
n
18
DC
218
Z
DG
219
n
19
DG
219
Z
DG
220
n
20
DG
220
Z
DT
221
n
21
DT
221
Z
n
22
222
Z
author_and_software_defined_assembly
PQS
32
32-meric
author_and_software_defined_assembly
PQS
6
hexameric
author_and_software_defined_assembly
PQS
6
hexameric
author_and_software_defined_assembly
PQS
8
octameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-x+1,-y+1,z
crystal symmetry operation
213.4000000000
76.0400000000
0.0000000000
A
N
LYS
3
A
N
LYS
3
B
O
LEU
9
B
O
LEU
9
D
N
LYS
3
C
N
LYS
3
E
O
LEU
9
D
O
LEU
9
F
N
LYS
3
E
N
LYS
3
G
O
LEU
9
F
O
LEU
9
H
N
LYS
3
G
N
LYS
3
J
O
LEU
9
H
O
LEU
9
K
N
ILE
7
I
N
ILE
7
L
O
LEU
5
J
O
LEU
5
1
U
P
DA
202
K
P
DA
2
1
Y
1
U
OP1
DA
202
K
OP1
DA
2
1
Y
1
U
OP2
DA
202
K
OP2
DA
2
1
Y
1
U
C5'
DT
221
K
C5'
DT
21
1
Y
1
U
C4'
DT
221
K
C4'
DT
21
1
Y
1
U
O4'
DT
221
K
O4'
DT
21
1
Y
1
U
C3'
DT
221
K
C3'
DT
21
1
Y
1
U
O3'
DT
221
K
O3'
DT
21
1
Y
1
U
C2'
DT
221
K
C2'
DT
21
1
Y
1
U
C1'
DT
221
K
C1'
DT
21
1
Y
1
U
N1
DT
221
K
N1
DT
21
1
Y
1
U
C2
DT
221
K
C2
DT
21
1
Y
1
U
O2
DT
221
K
O2
DT
21
1
Y
1
U
N3
DT
221
K
N3
DT
21
1
Y
1
U
C4
DT
221
K
C4
DT
21
1
Y
1
U
O4
DT
221
K
O4
DT
21
1
Y
1
U
C5
DT
221
K
C5
DT
21
1
Y
1
U
C7
DT
221
K
C7
DT
21
1
Y
1
U
C6
DT
221
K
C6
DT
21
1
Y
1
V
C5'
DT
221
L
C5'
DT
21
1
Y
1
V
C4'
DT
221
L
C4'
DT
21
1
Y
1
V
O4'
DT
221
L
O4'
DT
21
1
Y
1
V
C3'
DT
221
L
C3'
DT
21
1
Y
1
V
O3'
DT
221
L
O3'
DT
21
1
Y
1
V
C2'
DT
221
L
C2'
DT
21
1
Y
1
V
C1'
DT
221
L
C1'
DT
21
1
Y
1
V
N1
DT
221
L
N1
DT
21
1
Y
1
V
C2
DT
221
L
C2
DT
21
1
Y
1
V
O2
DT
221
L
O2
DT
21
1
Y
1
V
N3
DT
221
L
N3
DT
21
1
Y
1
V
C4
DT
221
L
C4
DT
21
1
Y
1
V
O4
DT
221
L
O4
DT
21
1
Y
1
V
C5
DT
221
L
C5
DT
21
1
Y
1
V
C7
DT
221
L
C7
DT
21
1
Y
1
V
C6
DT
221
L
C6
DT
21
1
Y
1
X
C5'
DT
222
N
C5'
DT
22
1
Y
1
X
C4'
DT
222
N
C4'
DT
22
1
Y
1
X
O4'
DT
222
N
O4'
DT
22
1
Y
1
X
C3'
DT
222
N
C3'
DT
22
1
Y
1
X
O3'
DT
222
N
O3'
DT
22
1
Y
1
X
C2'
DT
222
N
C2'
DT
22
1
Y
1
X
C1'
DT
222
N
C1'
DT
22
1
Y
1
X
N1
DT
222
N
N1
DT
22
1
Y
1
X
C2
DT
222
N
C2
DT
22
1
Y
1
X
O2
DT
222
N
O2
DT
22
1
Y
1
X
N3
DT
222
N
N3
DT
22
1
Y
1
X
C4
DT
222
N
C4
DT
22
1
Y
1
X
O4
DT
222
N
O4
DT
22
1
Y
1
X
C5
DT
222
N
C5
DT
22
1
Y
1
X
C7
DT
222
N
C7
DT
22
1
Y
1
X
C6
DT
222
N
C6
DT
22
1
Y
1
Y
P
DA
202
O
P
DA
2
1
Y
1
Y
OP1
DA
202
O
OP1
DA
2
1
Y
1
Y
OP2
DA
202
O
OP2
DA
2
1
Y
1
Y
P
DC
213
O
P
DC
13
1
Y
1
Y
OP1
DC
213
O
OP1
DC
13
1
Y
1
Y
OP2
DC
213
O
OP2
DC
13
1
Y
1
Z
P
DA
212
P
P
DA
12
1
Y
1
Z
OP1
DA
212
P
OP1
DA
12
1
Y
1
Z
OP2
DA
212
P
OP2
DA
12
1
Y
1
A
MET
1
A
MET
1
1
Y
1
A
GLU
44
A
GLU
44
1
Y
1
A
LYS
45
A
LYS
45
1
Y
1
B
GLY
42
B
GLY
42
1
Y
1
B
GLN
43
B
GLN
43
1
Y
1
B
GLU
44
B
GLU
44
1
Y
1
B
LYS
45
B
LYS
45
1
Y
1
D
GLU
44
C
GLU
44
1
Y
1
D
LYS
45
C
LYS
45
1
Y
1
E
LYS
45
D
LYS
45
1
Y
1
G
GLN
43
F
GLN
43
1
Y
1
G
GLU
44
F
GLU
44
1
Y
1
G
LYS
45
F
LYS
45
1
Y
1
H
MET
1
G
MET
1
1
Y
1
J
LYS
45
H
LYS
45
1
Y
1
K
GLU
44
I
GLU
44
1
Y
1
K
LYS
45
I
LYS
45
1
Y
1
L
LYS
45
J
LYS
45
1
Y
1
U
DT
201
K
DT
1
1
Y
1
U
DC
222
K
DC
22
1
Y
1
V
DT
222
L
DT
22
1
Y
1
Y
DT
201
O
DT
1
1
Y
1
Z
DT
222
P
DT
22
1
Y
1
B
B
O
N
TYR
LYS
39
41
2.04
1
1.93
0.30
108.30
110.23
V
V
V
O4'
C1'
N1
DT
DT
DT
214
214
214
N
1
2.53
0.30
108.30
110.83
Z
Z
Z
O4'
C1'
N9
DG
DG
DG
211
211
211
B
B
B
N
1
F
F
CE
NZ
LYS
LYS
45
45
-0.154
0.025
1.486
1.332
N
1
H
H
CE
NZ
LYS
LYS
45
45
-0.153
0.025
1.486
1.333
N
1
Z
Z
N1
C2
DG
DG
211
211
0.052
0.008
1.373
1.425
B
B
N
1
A
LYS
19
-53.06
-71.16
1
B
LYS
40
-64.46
51.08
1
E
GLN
43
-143.29
-31.50
1
F
GLN
43
-144.64
26.42
1
F
GLU
44
-69.93
-114.96
1
G
LYS
2
-178.21
95.67
1
H
GLN
43
-88.47
42.64
1
H
GLU
44
-127.81
-163.12
1
K
LYS
2
-105.94
45.86
1
K
LYS
3
-22.13
143.83
1
K
LYS
19
-58.29
-70.23
1
L
LYS
2
149.48
54.62
1
L
LYS
3
-11.12
140.61
1
L
LYS
19
-51.95
-71.00
1
L
GLN
43
-25.76
-44.20
66.3
NOE RESTRAINTS FOR WATSON & CRICK BASE PAIRING. THE COMPLEX SET UP FOR CRYSTALLIZATION WAS MADE UP BY A COPG DIMER-OF-HOMODIMERS AND A 22-BP DSDNA. THERE ARE 2,5 OF THOSE COMPLEXES IN THE ASYMMETRIC UNIT, DEFG+WX (PROTEIN + DNA), HJKL+UV, AND ABA'B'+YZ. THE LATTER REPRESENTS THE "HALF" COMPLEX. THE OTHER HALF IS CREATED BY A CRYSTALLOGRAPHIC TWOFOLD (RENDERING A' AND B'). THE DNA PART HAS BEEN MODELLED WITH THE TWO OBSERVED ORIENTATIONS, EACH WITH OCCUPANCY 0.5. THERE ARE NCS RESTRAINTS, BUT SO MANY THAT THE MATRICES AND TRANSLATIONS HAVE NOT BEEN INCLUDED IN THIS ENTRY. ESSENTIALLY, ALL PROTEIN CHAINS AND ALL DNA STRANDS HAVE BEEN SUBJECTED TO RESTRAINTS.
0.307
0.230
0.230
2.95
40.00
17507
7.00
96.9
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1B01
MAXIMUM LIKELIHOOD
2.95
40.00
101
6013
0
2535
3377
0.009
1.34
1
RESTRAINTS
1
X-RAY DIFFRACTION
80.8
2.920
43.850
1EA4
17592
0.10600
1
5.9000
5.900
93.6
refinement
CNS
1.0
data reduction
MOSFLM
data scaling
SCALA
phasing
AMoRE
TRANSCRIPTIONAL REPRESSOR COPG/22bp dsDNA COMPLEX
1
N
N
1
N
N
1
N
N
1
N
N
1
N
N
1
N
N
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
FUNCTIONAL TETRAMERS (EACH ONE CONTACTING A
22BP DSDNA)ARE DEFG, HJKL, AND ABA'B' (A' AND
B' ARE SYMMETRYEQUIVALENT MOLECULES).TETRAMER DEFG
CONTACTS DSDNA WX, HJKL PAIRS UV, ANDABA'B'
INTERACTS WITH YZ(DOUBLE OCCUPANCY DUE TO
CRYSTALLOGRAPHIC TWOFOLD AXIS)THE BIOMOLECULE 1 IS
THE SUPERHELICAL STRUCTURE AND THETETRAMERS CAN BE
GENERATED USING THE MATRICES GIVENFOR BIOMOLECULES 2
, 3 AND 4
A
GLU
11
A
GLU
11
HELX_P
A
GLY
25
A
GLY
25
1
1
15
A
SER
27
A
SER
27
HELX_P
A
LYS
40
A
LYS
40
1
2
14
B
SER
10
B
SER
10
HELX_P
B
MET
24
B
MET
24
1
3
15
B
SER
27
B
SER
27
HELX_P
B
LYS
40
B
LYS
40
1
4
14
D
GLU
11
C
GLU
11
HELX_P
D
GLY
25
C
GLY
25
1
5
15
D
SER
27
C
SER
27
HELX_P
D
LYS
41
C
LYS
41
1
6
15
E
SER
10
D
SER
10
HELX_P
E
GLY
25
D
GLY
25
1
7
16
E
SER
27
D
SER
27
HELX_P
E
GLY
42
D
GLY
42
1
8
16
F
SER
10
E
SER
10
HELX_P
F
GLY
25
E
GLY
25
1
9
16
F
SER
27
E
SER
27
HELX_P
F
GLY
42
E
GLY
42
1
10
16
G
GLU
11
F
GLU
11
HELX_P
G
GLY
25
F
GLY
25
1
11
15
G
SER
27
F
SER
27
HELX_P
G
LYS
41
F
LYS
41
1
12
15
H
GLU
11
G
GLU
11
HELX_P
H
GLY
25
G
GLY
25
1
13
15
H
SER
27
G
SER
27
HELX_P
H
GLN
43
G
GLN
43
1
14
17
J
SER
10
H
SER
10
HELX_P
J
GLY
25
H
GLY
25
1
15
16
J
SER
27
H
SER
27
HELX_P
J
GLY
42
H
GLY
42
1
16
16
K
SER
10
I
SER
10
HELX_P
K
GLY
25
I
GLY
25
1
17
16
K
SER
27
I
SER
27
HELX_P
K
GLY
42
I
GLY
42
1
18
16
L
SER
10
J
SER
10
HELX_P
L
GLY
25
J
GLY
25
1
19
16
L
SER
27
J
SER
27
HELX_P
L
GLU
44
J
GLU
44
1
20
18
hydrog
WATSON-CRICK
U
DC
204
K
N3
DC
4
1_555
V
DG
220
L
N1
DG
20
1_555
hydrog
WATSON-CRICK
U
DC
204
K
N4
DC
4
1_555
V
DG
220
L
O6
DG
20
1_555
hydrog
WATSON-CRICK
U
DC
204
K
O2
DC
4
1_555
V
DG
220
L
N2
DG
20
1_555
hydrog
WATSON-CRICK
U
DC
205
K
N3
DC
5
1_555
V
DG
219
L
N1
DG
19
1_555
hydrog
WATSON-CRICK
U
DC
205
K
N4
DC
5
1_555
V
DG
219
L
O6
DG
19
1_555
hydrog
WATSON-CRICK
U
DC
205
K
O2
DC
5
1_555
V
DG
219
L
N2
DG
19
1_555
hydrog
DG-DC PAIR
U
DG
206
K
N2
DG
6
1_555
V
DC
218
L
O2
DC
18
1_555
hydrog
WATSON-CRICK
U
DT
207
K
N3
DT
7
1_555
V
DA
217
L
N1
DA
17
1_555
hydrog
WATSON-CRICK
U
DT
207
K
O4
DT
7
1_555
V
DA
217
L
N6
DA
17
1_555
hydrog
WATSON-CRICK
U
DG
208
K
N1
DG
8
1_555
V
DC
216
L
N3
DC
16
1_555
hydrog
WATSON-CRICK
U
DG
208
K
N2
DG
8
1_555
V
DC
216
L
O2
DC
16
1_555
hydrog
WATSON-CRICK
U
DG
208
K
O6
DG
8
1_555
V
DC
216
L
N4
DC
16
1_555
hydrog
WATSON-CRICK
U
DC
209
K
N3
DC
9
1_555
V
DG
215
L
N1
DG
15
1_555
hydrog
WATSON-CRICK
U
DC
209
K
N4
DC
9
1_555
V
DG
215
L
O6
DG
15
1_555
hydrog
WATSON-CRICK
U
DC
209
K
O2
DC
9
1_555
V
DG
215
L
N2
DG
15
1_555
hydrog
WATSON-CRICK
U
DA
210
K
N1
DA
10
1_555
V
DT
214
L
N3
DT
14
1_555
hydrog
WATSON-CRICK
U
DA
210
K
N6
DA
10
1_555
V
DT
214
L
O4
DT
14
1_555
hydrog
DC-DG PAIR
U
DC
211
K
O2
DC
11
1_555
V
DG
213
L
N2
DG
13
1_555
hydrog
DT-DA PAIR
U
DT
212
K
N3
DT
12
1_555
V
DA
212
L
N1
DA
12
1_555
hydrog
WATSON-CRICK
U
DC
213
K
N3
DC
13
1_555
V
DG
211
L
N1
DG
11
1_555
hydrog
WATSON-CRICK
U
DC
213
K
N4
DC
13
1_555
V
DG
211
L
O6
DG
11
1_555
hydrog
WATSON-CRICK
U
DC
213
K
O2
DC
13
1_555
V
DG
211
L
N2
DG
11
1_555
hydrog
WATSON-CRICK
U
DA
214
K
N1
DA
14
1_555
V
DT
210
L
N3
DT
10
1_555
hydrog
WATSON-CRICK
U
DA
214
K
N6
DA
14
1_555
V
DT
210
L
O4
DT
10
1_555
hydrog
WATSON-CRICK
U
DA
215
K
N1
DA
15
1_555
V
DT
209
L
N3
DT
9
1_555
hydrog
WATSON-CRICK
U
DA
215
K
N6
DA
15
1_555
V
DT
209
L
O4
DT
9
1_555
hydrog
WATSON-CRICK
U
DT
216
K
N3
DT
16
1_555
V
DA
208
L
N1
DA
8
1_555
hydrog
WATSON-CRICK
U
DT
216
K
O4
DT
16
1_555
V
DA
208
L
N6
DA
8
1_555
hydrog
WATSON-CRICK
U
DG
217
K
N1
DG
17
1_555
V
DC
207
L
N3
DC
7
1_555
hydrog
WATSON-CRICK
U
DG
217
K
N2
DG
17
1_555
V
DC
207
L
O2
DC
7
1_555
hydrog
WATSON-CRICK
U
DG
217
K
O6
DG
17
1_555
V
DC
207
L
N4
DC
7
1_555
hydrog
WATSON-CRICK
U
DC
218
K
N3
DC
18
1_555
V
DG
206
L
N1
DG
6
1_555
hydrog
WATSON-CRICK
U
DC
218
K
N4
DC
18
1_555
V
DG
206
L
O6
DG
6
1_555
hydrog
WATSON-CRICK
U
DC
218
K
O2
DC
18
1_555
V
DG
206
L
N2
DG
6
1_555
hydrog
WATSON-CRICK
U
DA
219
K
N1
DA
19
1_555
V
DT
205
L
N3
DT
5
1_555
hydrog
WATSON-CRICK
U
DA
219
K
N6
DA
19
1_555
V
DT
205
L
O4
DT
5
1_555
hydrog
TYPE_1_PAIR
U
DA
220
K
N1
DA
20
1_555
V
DA
203
L
N6
DA
3
1_555
hydrog
TYPE_1_PAIR
U
DA
220
K
N6
DA
20
1_555
V
DA
203
L
N1
DA
3
1_555
hydrog
WATSON-CRICK
U
DA
220
K
N1
DA
20
1_555
V
DT
204
L
N3
DT
4
1_555
hydrog
WATSON-CRICK
U
DA
220
K
N6
DA
20
1_555
V
DT
204
L
O4
DT
4
1_555
hydrog
WATSON-CRICK
W
DA
203
M
N1
DA
3
1_555
X
DT
221
N
N3
DT
21
1_555
hydrog
WATSON-CRICK
W
DA
203
M
N6
DA
3
1_555
X
DT
221
N
O4
DT
21
1_555
hydrog
WATSON-CRICK
W
DC
204
M
N3
DC
4
1_555
X
DG
220
N
N1
DG
20
1_555
hydrog
WATSON-CRICK
W
DC
204
M
N4
DC
4
1_555
X
DG
220
N
O6
DG
20
1_555
hydrog
WATSON-CRICK
W
DC
204
M
O2
DC
4
1_555
X
DG
220
N
N2
DG
20
1_555
hydrog
WATSON-CRICK
W
DC
205
M
N3
DC
5
1_555
X
DG
219
N
N1
DG
19
1_555
hydrog
WATSON-CRICK
W
DC
205
M
N4
DC
5
1_555
X
DG
219
N
O6
DG
19
1_555
hydrog
WATSON-CRICK
W
DC
205
M
O2
DC
5
1_555
X
DG
219
N
N2
DG
19
1_555
hydrog
TYPE_8_PAIR
W
DG
206
M
N1
DG
6
1_555
X
DA
217
N
N1
DA
17
1_555
hydrog
TYPE_8_PAIR
W
DG
206
M
O6
DG
6
1_555
X
DA
217
N
N6
DA
17
1_555
hydrog
WATSON-CRICK
W
DG
206
M
N1
DG
6
1_555
X
DC
218
N
N3
DC
18
1_555
hydrog
WATSON-CRICK
W
DG
206
M
N2
DG
6
1_555
X
DC
218
N
O2
DC
18
1_555
hydrog
WATSON-CRICK
W
DG
206
M
O6
DG
6
1_555
X
DC
218
N
N4
DC
18
1_555
hydrog
WATSON-CRICK
W
DT
207
M
N3
DT
7
1_555
X
DA
217
N
N1
DA
17
1_555
hydrog
WATSON-CRICK
W
DT
207
M
O4
DT
7
1_555
X
DA
217
N
N6
DA
17
1_555
hydrog
WATSON-CRICK
W
DG
208
M
N1
DG
8
1_555
X
DC
216
N
N3
DC
16
1_555
hydrog
WATSON-CRICK
W
DG
208
M
N2
DG
8
1_555
X
DC
216
N
O2
DC
16
1_555
hydrog
WATSON-CRICK
W
DG
208
M
O6
DG
8
1_555
X
DC
216
N
N4
DC
16
1_555
hydrog
WATSON-CRICK
W
DC
209
M
N3
DC
9
1_555
X
DG
215
N
N1
DG
15
1_555
hydrog
WATSON-CRICK
W
DC
209
M
N4
DC
9
1_555
X
DG
215
N
O6
DG
15
1_555
hydrog
WATSON-CRICK
W
DC
209
M
O2
DC
9
1_555
X
DG
215
N
N2
DG
15
1_555
hydrog
WATSON-CRICK
W
DA
210
M
N1
DA
10
1_555
X
DT
214
N
N3
DT
14
1_555
hydrog
WATSON-CRICK
W
DA
210
M
N6
DA
10
1_555
X
DT
214
N
O4
DT
14
1_555
hydrog
WATSON-CRICK
W
DC
211
M
N3
DC
11
1_555
X
DG
213
N
N1
DG
13
1_555
hydrog
WATSON-CRICK
W
DC
211
M
N4
DC
11
1_555
X
DG
213
N
O6
DG
13
1_555
hydrog
WATSON-CRICK
W
DC
211
M
O2
DC
11
1_555
X
DG
213
N
N2
DG
13
1_555
hydrog
WATSON-CRICK
W
DT
212
M
N3
DT
12
1_555
X
DA
212
N
N1
DA
12
1_555
hydrog
WATSON-CRICK
W
DT
212
M
O4
DT
12
1_555
X
DA
212
N
N6
DA
12
1_555
hydrog
WATSON-CRICK
W
DC
213
M
N3
DC
13
1_555
X
DG
211
N
N1
DG
11
1_555
hydrog
WATSON-CRICK
W
DC
213
M
N4
DC
13
1_555
X
DG
211
N
O6
DG
11
1_555
hydrog
WATSON-CRICK
W
DC
213
M
O2
DC
13
1_555
X
DG
211
N
N2
DG
11
1_555
hydrog
WATSON-CRICK
W
DA
214
M
N1
DA
14
1_555
X
DT
210
N
N3
DT
10
1_555
hydrog
WATSON-CRICK
W
DA
214
M
N6
DA
14
1_555
X
DT
210
N
O4
DT
10
1_555
hydrog
WATSON-CRICK
W
DA
215
M
N1
DA
15
1_555
X
DT
209
N
N3
DT
9
1_555
hydrog
WATSON-CRICK
W
DA
215
M
N6
DA
15
1_555
X
DT
209
N
O4
DT
9
1_555
hydrog
WATSON-CRICK
W
DT
216
M
N3
DT
16
1_555
X
DA
208
N
N1
DA
8
1_555
hydrog
WATSON-CRICK
W
DT
216
M
O4
DT
16
1_555
X
DA
208
N
N6
DA
8
1_555
hydrog
WATSON-CRICK
W
DG
217
M
N1
DG
17
1_555
X
DC
207
N
N3
DC
7
1_555
hydrog
WATSON-CRICK
W
DG
217
M
N2
DG
17
1_555
X
DC
207
N
O2
DC
7
1_555
hydrog
WATSON-CRICK
W
DG
217
M
O6
DG
17
1_555
X
DC
207
N
N4
DC
7
1_555
hydrog
WATSON-CRICK
W
DC
218
M
N3
DC
18
1_555
X
DG
206
N
N1
DG
6
1_555
hydrog
WATSON-CRICK
W
DC
218
M
N4
DC
18
1_555
X
DG
206
N
O6
DG
6
1_555
hydrog
WATSON-CRICK
W
DC
218
M
O2
DC
18
1_555
X
DG
206
N
N2
DG
6
1_555
hydrog
WATSON-CRICK
W
DA
219
M
N1
DA
19
1_555
X
DT
205
N
N3
DT
5
1_555
hydrog
WATSON-CRICK
W
DA
219
M
N6
DA
19
1_555
X
DT
205
N
O4
DT
5
1_555
hydrog
WATSON-CRICK
W
DA
220
M
N1
DA
20
1_555
X
DT
204
N
N3
DT
4
1_555
hydrog
WATSON-CRICK
W
DA
220
M
N6
DA
20
1_555
X
DT
204
N
O4
DT
4
1_555
hydrog
WATSON-CRICK
W
DT
221
M
N3
DT
21
1_555
X
DA
203
N
N1
DA
3
1_555
hydrog
WATSON-CRICK
W
DT
221
M
O4
DT
21
1_555
X
DA
203
N
N6
DA
3
1_555
hydrog
WATSON-CRICK
W
DC
222
M
N3
DC
22
1_555
X
DG
202
N
N1
DG
2
1_555
hydrog
WATSON-CRICK
W
DC
222
M
N4
DC
22
1_555
X
DG
202
N
O6
DG
2
1_555
hydrog
WATSON-CRICK
W
DC
222
M
O2
DC
22
1_555
X
DG
202
N
N2
DG
2
1_555
hydrog
DG-DA MISPAIR
A
A
Y
DG
206
O
N2
DG
6
1_555
Y
DA
220
O
N1
DA
20
1_555
hydrog
WATSON-CRICK
A
A
Y
DT
207
O
N3
DT
7
1_555
Y
DA
219
O
N1
DA
19
1_555
hydrog
WATSON-CRICK
A
A
Y
DT
207
O
O4
DT
7
1_555
Y
DA
219
O
N6
DA
19
1_555
hydrog
WATSON-CRICK
A
A
Y
DG
208
O
N1
DG
8
1_555
Y
DC
218
O
N3
DC
18
1_555
hydrog
WATSON-CRICK
A
A
Y
DG
208
O
N2
DG
8
1_555
Y
DC
218
O
O2
DC
18
1_555
hydrog
WATSON-CRICK
A
A
Y
DG
208
O
O6
DG
8
1_555
Y
DC
218
O
N4
DC
18
1_555
hydrog
WATSON-CRICK
A
A
Y
DC
209
O
N3
DC
9
1_555
Y
DG
217
O
N1
DG
17
1_555
hydrog
WATSON-CRICK
A
A
Y
DC
209
O
N4
DC
9
1_555
Y
DG
217
O
O6
DG
17
1_555
hydrog
WATSON-CRICK
A
A
Y
DC
209
O
O2
DC
9
1_555
Y
DG
217
O
N2
DG
17
1_555
hydrog
WATSON-CRICK
A
A
Y
DA
210
O
N1
DA
10
1_555
Y
DT
216
O
N3
DT
16
1_555
hydrog
WATSON-CRICK
A
A
Y
DA
210
O
N6
DA
10
1_555
Y
DT
216
O
O4
DT
16
1_555
hydrog
DC-DA MISPAIR
A
A
Y
DC
211
O
N3
DC
11
1_555
Y
DA
215
O
N6
DA
15
1_555
hydrog
WATSON-CRICK
A
A
Y
DT
212
O
N3
DT
12
1_555
Y
DA
214
O
N1
DA
14
1_555
hydrog
WATSON-CRICK
A
A
Y
DT
212
O
O4
DT
12
1_555
Y
DA
214
O
N6
DA
14
1_555
hydrog
DA-DT PAIR
B
B
Z
DA
201
P
N1
DA
1
1_555
Z
DT
221
P
N3
DT
21
1_555
hydrog
TYPE_4_PAIR
B
B
Z
DG
202
P
N2
DG
2
1_555
Z
DG
220
P
N3
DG
20
1_555
hydrog
TYPE_4_PAIR
B
B
Z
DG
202
P
N3
DG
2
1_555
Z
DG
220
P
N2
DG
20
1_555
hydrog
DA-DG MISPAIR
B
B
Z
DA
203
P
N3
DA
3
1_555
Z
DG
219
P
N2
DG
19
1_555
hydrog
WATSON-CRICK
B
B
Z
DT
205
P
N3
DT
5
1_555
Z
DA
217
P
N1
DA
17
1_555
hydrog
WATSON-CRICK
B
B
Z
DT
205
P
O4
DT
5
1_555
Z
DA
217
P
N6
DA
17
1_555
hydrog
WATSON-CRICK
B
B
Z
DG
206
P
N1
DG
6
1_555
Z
DC
216
P
N3
DC
16
1_555
hydrog
WATSON-CRICK
B
B
Z
DG
206
P
N2
DG
6
1_555
Z
DC
216
P
O2
DC
16
1_555
hydrog
WATSON-CRICK
B
B
Z
DG
206
P
O6
DG
6
1_555
Z
DC
216
P
N4
DC
16
1_555
hydrog
WATSON-CRICK
B
B
Z
DC
207
P
N3
DC
7
1_555
Z
DG
215
P
N1
DG
15
1_555
hydrog
WATSON-CRICK
B
B
Z
DC
207
P
N4
DC
7
1_555
Z
DG
215
P
O6
DG
15
1_555
hydrog
WATSON-CRICK
B
B
Z
DC
207
P
O2
DC
7
1_555
Z
DG
215
P
N2
DG
15
1_555
hydrog
WATSON-CRICK
B
B
Z
DA
208
P
N1
DA
8
1_555
Z
DT
214
P
N3
DT
14
1_555
hydrog
WATSON-CRICK
B
B
Z
DA
208
P
N6
DA
8
1_555
Z
DT
214
P
O4
DT
14
1_555
hydrog
DT-DG MISPAIR
B
B
Z
DT
209
P
O2
DT
9
1_555
Z
DG
213
P
N2
DG
13
1_555
hydrog
WATSON-CRICK
B
B
Z
DT
210
P
N3
DT
10
1_555
Z
DA
212
P
N1
DA
12
1_555
hydrog
WATSON-CRICK
B
B
Z
DT
210
P
O4
DT
10
1_555
Z
DA
212
P
N6
DA
12
1_555
GENE REGULATION/DNA
TRANSCRIPTIONAL REPRESSOR, DNA-BINDING PROTEIN, PLASMID, PROTEIN-DNA COMPLEX, GENE REGULATION/DNA, GENE REGULATION-DNA complex
REPA_STRPN
UNP
1
P13920
1EA4
PDB
2
1EA4
1EA4
PDB
3
1EA4
1
45
1EA4
1
45
P13920
A
1
1
45
1
45
1EA4
1
45
P13920
B
1
1
45
1
45
1EA4
1
45
P13920
D
1
1
45
1
45
1EA4
1
45
P13920
E
1
1
45
1
45
1EA4
1
45
P13920
F
1
1
45
1
45
1EA4
1
45
P13920
G
1
1
45
1
45
1EA4
1
45
P13920
H
1
1
45
1
45
1EA4
1
45
P13920
J
1
1
45
1
45
1EA4
1
45
P13920
K
1
1
45
1
45
1EA4
1
45
P13920
L
1
1
45
201
222
1EA4
201
222
1EA4
U
2
1
22
201
222
1EA4
201
222
1EA4
V
3
1
22
201
222
1EA4
201
222
1EA4
W
2
1
22
201
222
1EA4
201
222
1EA4
X
3
1
22
202
222
1EA4
202
222
1EA4
Y
2
2
22
201
222
1EA4
201
222
1EA4
Z
3
1
22
2
2
2
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
3
A
LYS
3
A
SER
10
A
SER
10
B
LYS
2
B
LYS
2
B
LEU
9
B
LEU
9
D
LYS
3
C
LYS
3
D
SER
10
C
SER
10
E
LYS
2
D
LYS
2
E
LEU
9
D
LEU
9
F
LYS
2
E
LYS
2
F
LEU
9
E
LEU
9
G
LYS
3
F
LYS
3
G
SER
10
F
SER
10
H
LYS
3
G
LYS
3
H
SER
10
G
SER
10
J
LYS
2
H
LYS
2
J
LEU
9
H
LEU
9
K
ARG
4
I
ARG
4
K
THR
8
I
THR
8
L
ARG
4
J
ARG
4
L
THR
8
J
THR
8
18
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