0.004434
0.000000
0.000000
0.000000
0.004434
0.000000
0.000000
0.000000
0.004434
0.00000
0.00000
0.00000
RESIDUE 575 IS A CIS PROLINE.
Mattevi, A.
Hol, W.G.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
96
90.00
90.00
90.00
225.540
225.540
225.540
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C21 H36 N7 O16 P3 S
767.534
COENZYME A
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C8 H17 N O S2
207.357
6,8-DIMERCAPTO-OCTANOIC ACID AMIDE
non-polymer
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
Y
74
N
N
Y
75
N
C
Y
76
N
N
Y
77
N
C
Y
78
N
C
Y
79
N
C
N
80
N
N
Y
81
N
N
Y
82
N
C
Y
83
N
N
N
84
R
C
N
85
R
C
N
86
N
O
N
87
S
C
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
R
C
N
94
N
O
N
95
N
C
N
96
N
O
N
97
S
P
N
98
N
O
N
99
N
O
N
100
N
O
N
101
S
P
N
102
N
O
N
103
N
O
N
104
N
O
N
105
N
C
N
106
N
C
N
107
N
C
N
108
N
C
N
109
R
C
N
110
N
O
N
111
N
C
N
112
N
O
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
C
N
117
N
O
N
118
N
N
N
119
N
C
N
120
N
C
N
121
N
S
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
R
C
N
160
N
C
N
161
N
O
N
162
N
C
N
163
N
S
N
164
N
O
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
N
N
173
S
C
N
174
N
C
N
175
N
O
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
N
N
181
N
O
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
O
N
200
N
O
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
N
N
212
N
C
N
213
N
C
N
214
N
O
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
N
N
222
S
C
N
223
N
C
N
224
N
O
N
225
N
C
Y
226
N
C
Y
227
N
N
Y
228
N
C
Y
229
N
C
Y
230
N
N
N
231
N
O
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
N
N
246
S
C
N
247
N
C
N
248
N
O
N
249
S
C
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
O
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
N
N
268
S
C
N
269
N
C
N
270
N
O
N
271
N
C
N
272
N
C
N
273
N
C
N
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
C
N
290
N
O
N
291
N
N
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
C
N
296
R
C
N
297
N
S
N
298
N
C
N
299
N
C
N
300
N
S
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
N
323
N
C
N
324
N
C
N
325
N
C
N
326
N
N
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
N
C
N
348
N
C
N
349
N
S
N
350
N
C
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
N
391
N
C
N
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
N
408
N
O
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
N
N
418
S
C
N
419
N
C
N
420
N
O
N
421
R
C
N
422
N
O
N
423
N
C
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
N
N
435
S
C
N
436
N
C
N
437
N
O
N
438
N
C
Y
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
N
Y
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
N
448
N
O
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
N
N
462
S
C
N
463
N
C
N
464
N
O
N
465
N
C
Y
466
N
C
Y
467
N
C
Y
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
C
N
472
N
O
N
473
N
O
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
N
N
486
S
C
N
487
N
C
N
488
N
O
N
489
N
C
N
490
N
C
N
491
N
C
N
492
N
O
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
Y
70
N
sing
Y
71
N
doub
Y
72
N
doub
N
73
N
sing
Y
74
N
sing
Y
75
N
doub
Y
76
N
sing
Y
77
N
sing
Y
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
Y
82
N
doub
Y
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
doub
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
Y
226
N
sing
Y
227
N
doub
Y
228
N
doub
N
229
N
sing
Y
230
N
sing
N
231
N
sing
Y
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
Y
362
N
doub
Y
363
N
sing
Y
364
N
sing
N
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
doub
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
doub
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
doub
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
Y
431
N
doub
Y
432
N
sing
Y
433
N
sing
N
434
N
sing
Y
435
N
doub
Y
436
N
sing
Y
437
N
sing
N
438
N
sing
Y
439
N
sing
Y
440
N
doub
N
441
N
sing
Y
442
N
doub
N
443
N
sing
Y
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
doub
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
Y
459
N
doub
Y
460
N
sing
Y
461
N
sing
N
462
N
sing
Y
463
N
doub
N
464
N
sing
Y
465
N
doub
N
466
N
sing
Y
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
doub
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
32
3887
3901
10.1021/bi00066a007
8471601
Crystallographic analysis of substrate binding and catalysis in dihydrolipoyl transacetylase (E2p).
1993
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
230
1200
Three-Dimensional Structure of Lipoamide Dehydrogenase from Pseudomonas Fluorescens at 2.8 Angstroms Resolution. Analysis of Redox and Thermostability Properties
1993
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
230
1183
Refined Crystal Structure of the Catalytic Domain of Dihydrolipoyl Transacetylase (E2P) from Azotobacter Vinelandii at 2.6 Angstroms Resolution
1993
US
Biochemistry
BICHAW
0033
0006-2960
32
3887
Crystallographic Analysis of Substrate Binding and Catalysis in Dihydrolipoyl Transacetylase (E2P)
1993
10.2210/pdb1eab/pdb
pdb_00001eab
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
26241.748
DIHYDROLIPOYL-TRANSACETYLASE
2.3.1.12
1
man
polymer
767.534
COENZYME A
1
syn
non-polymer
207.357
6,8-DIMERCAPTO-OCTANOIC ACID AMIDE
1
syn
non-polymer
18.015
water
42
nat
water
no
no
IPPIPPVDFAKYGEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAKKAGVKLTVLPLLLKAC
AYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGAC
FTISSLGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGDLLADIRA
ILL
IPPIPPVDFAKYGEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAKKAGVKLTVLPLLLKAC
AYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGAC
FTISSLGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGDLLADIRA
ILL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Azotobacter
sample
354
Azotobacter vinelandii
4.55
72.97
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Other
1
0
1993-10-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
SHEET
SHEET A IS ACTUALLY A FOUR-STRANDED SHEET. IT CONTAINS
TWO ADDITIONAL STRANDS
A 3 ILE 409 PRO 413 -1
A 4 THR 566 PHE 568 -1
FROM A THREEFOLD-RELATED SUBUNIT.
Y
BNL
1992-12-16
REL
REL
COA
COENZYME A
LPM
6,8-DIMERCAPTO-OCTANOIC ACID AMIDE
HOH
water
THESE COORDINATES ARE FOR THE TERNARY COMPLEX WITH COA
(RESIDUE 638) AND DIHYDROLIPOAMIDE (RESIDUE 639). FOR A
MORE DETAILED DESCRIPTION SEE REFERENCE 3.
SEQUENCE ADVISORY NOTICE:
DIFFERENCE BETWEEN SWISS-PROT AND PDB SEQUENCE.
SWISS-PROT ENTRY NAME: ODP2_AZOVI
SWISS-PROT RESIDUE PDB SEQRES
NAME NUMBER NAME CHAIN SEQ/INSERT CODE
GLU 458 LYS 458
COA
638
2
COA
COA
638
A
LPM
639
3
LPM
LPM
639
A
HOH
640
4
HOH
HOH
640
A
HOH
641
4
HOH
HOH
641
A
HOH
642
4
HOH
HOH
642
A
HOH
643
4
HOH
HOH
643
A
HOH
644
4
HOH
HOH
644
A
HOH
645
4
HOH
HOH
645
A
HOH
646
4
HOH
HOH
646
A
HOH
647
4
HOH
HOH
647
A
HOH
648
4
HOH
HOH
648
A
HOH
649
4
HOH
HOH
649
A
HOH
650
4
HOH
HOH
650
A
HOH
651
4
HOH
HOH
651
A
HOH
652
4
HOH
HOH
652
A
HOH
653
4
HOH
HOH
653
A
HOH
654
4
HOH
HOH
654
A
HOH
655
4
HOH
HOH
655
A
HOH
656
4
HOH
HOH
656
A
HOH
657
4
HOH
HOH
657
A
HOH
658
4
HOH
HOH
658
A
HOH
659
4
HOH
HOH
659
A
HOH
660
4
HOH
HOH
660
A
HOH
661
4
HOH
HOH
661
A
HOH
662
4
HOH
HOH
662
A
HOH
663
4
HOH
HOH
663
A
HOH
664
4
HOH
HOH
664
A
HOH
665
4
HOH
HOH
665
A
HOH
666
4
HOH
HOH
666
A
HOH
667
4
HOH
HOH
667
A
HOH
668
4
HOH
HOH
668
A
HOH
669
4
HOH
HOH
669
A
HOH
670
4
HOH
HOH
670
A
HOH
671
4
HOH
HOH
671
A
HOH
672
4
HOH
HOH
672
A
HOH
673
4
HOH
HOH
673
A
HOH
674
4
HOH
HOH
674
A
HOH
675
4
HOH
HOH
675
A
HOH
676
4
HOH
HOH
676
A
HOH
677
4
HOH
HOH
677
A
HOH
678
4
HOH
HOH
678
A
HOH
679
4
HOH
HOH
679
A
HOH
680
4
HOH
HOH
680
A
HOH
681
4
HOH
HOH
681
A
ILE
395
n
1
ILE
395
A
PRO
396
n
2
PRO
396
A
PRO
397
n
3
PRO
397
A
ILE
398
n
4
ILE
398
A
PRO
399
n
5
PRO
399
A
PRO
400
n
6
PRO
400
A
VAL
401
n
7
VAL
401
A
ASP
402
n
8
ASP
402
A
PHE
403
n
9
PHE
403
A
ALA
404
n
10
ALA
404
A
LYS
405
n
11
LYS
405
A
TYR
406
n
12
TYR
406
A
GLY
407
n
13
GLY
407
A
GLU
408
n
14
GLU
408
A
ILE
409
n
15
ILE
409
A
GLU
410
n
16
GLU
410
A
GLU
411
n
17
GLU
411
A
VAL
412
n
18
VAL
412
A
PRO
413
n
19
PRO
413
A
MET
414
n
20
MET
414
A
THR
415
n
21
THR
415
A
ARG
416
n
22
ARG
416
A
LEU
417
n
23
LEU
417
A
MET
418
n
24
MET
418
A
GLN
419
n
25
GLN
419
A
ILE
420
n
26
ILE
420
A
GLY
421
n
27
GLY
421
A
ALA
422
n
28
ALA
422
A
THR
423
n
29
THR
423
A
ASN
424
n
30
ASN
424
A
LEU
425
n
31
LEU
425
A
HIS
426
n
32
HIS
426
A
ARG
427
n
33
ARG
427
A
SER
428
n
34
SER
428
A
TRP
429
n
35
TRP
429
A
LEU
430
n
36
LEU
430
A
ASN
431
n
37
ASN
431
A
VAL
432
n
38
VAL
432
A
PRO
433
n
39
PRO
433
A
HIS
434
n
40
HIS
434
A
VAL
435
n
41
VAL
435
A
THR
436
n
42
THR
436
A
GLN
437
n
43
GLN
437
A
PHE
438
n
44
PHE
438
A
GLU
439
n
45
GLU
439
A
SER
440
n
46
SER
440
A
ALA
441
n
47
ALA
441
A
ASP
442
n
48
ASP
442
A
ILE
443
n
49
ILE
443
A
THR
444
n
50
THR
444
A
GLU
445
n
51
GLU
445
A
LEU
446
n
52
LEU
446
A
GLU
447
n
53
GLU
447
A
ALA
448
n
54
ALA
448
A
PHE
449
n
55
PHE
449
A
ARG
450
n
56
ARG
450
A
VAL
451
n
57
VAL
451
A
ALA
452
n
58
ALA
452
A
GLN
453
n
59
GLN
453
A
LYS
454
n
60
LYS
454
A
ALA
455
n
61
ALA
455
A
VAL
456
n
62
VAL
456
A
ALA
457
n
63
ALA
457
A
LYS
458
n
64
LYS
458
A
LYS
459
n
65
LYS
459
A
ALA
460
n
66
ALA
460
A
GLY
461
n
67
GLY
461
A
VAL
462
n
68
VAL
462
A
LYS
463
n
69
LYS
463
A
LEU
464
n
70
LEU
464
A
THR
465
n
71
THR
465
A
VAL
466
n
72
VAL
466
A
LEU
467
n
73
LEU
467
A
PRO
468
n
74
PRO
468
A
LEU
469
n
75
LEU
469
A
LEU
470
n
76
LEU
470
A
LEU
471
n
77
LEU
471
A
LYS
472
n
78
LYS
472
A
ALA
473
n
79
ALA
473
A
CYS
474
n
80
CYS
474
A
ALA
475
n
81
ALA
475
A
TYR
476
n
82
TYR
476
A
LEU
477
n
83
LEU
477
A
LEU
478
n
84
LEU
478
A
LYS
479
n
85
LYS
479
A
GLU
480
n
86
GLU
480
A
LEU
481
n
87
LEU
481
A
PRO
482
n
88
PRO
482
A
ASP
483
n
89
ASP
483
A
PHE
484
n
90
PHE
484
A
ASN
485
n
91
ASN
485
A
SER
486
n
92
SER
486
A
SER
487
n
93
SER
487
A
LEU
488
n
94
LEU
488
A
ALA
489
n
95
ALA
489
A
PRO
490
n
96
PRO
490
A
SER
491
n
97
SER
491
A
GLY
492
n
98
GLY
492
A
GLN
493
n
99
GLN
493
A
ALA
494
n
100
ALA
494
A
LEU
495
n
101
LEU
495
A
ILE
496
n
102
ILE
496
A
ARG
497
n
103
ARG
497
A
LYS
498
n
104
LYS
498
A
LYS
499
n
105
LYS
499
A
TYR
500
n
106
TYR
500
A
VAL
501
n
107
VAL
501
A
HIS
502
n
108
HIS
502
A
ILE
503
n
109
ILE
503
A
GLY
504
n
110
GLY
504
A
PHE
505
n
111
PHE
505
A
ALA
506
n
112
ALA
506
A
VAL
507
n
113
VAL
507
A
ASP
508
n
114
ASP
508
A
THR
509
n
115
THR
509
A
PRO
510
n
116
PRO
510
A
ASP
511
n
117
ASP
511
A
GLY
512
n
118
GLY
512
A
LEU
513
n
119
LEU
513
A
LEU
514
n
120
LEU
514
A
VAL
515
n
121
VAL
515
A
PRO
516
n
122
PRO
516
A
VAL
517
n
123
VAL
517
A
ILE
518
n
124
ILE
518
A
ARG
519
n
125
ARG
519
A
ASN
520
n
126
ASN
520
A
VAL
521
n
127
VAL
521
A
ASP
522
n
128
ASP
522
A
GLN
523
n
129
GLN
523
A
LYS
524
n
130
LYS
524
A
SER
525
n
131
SER
525
A
LEU
526
n
132
LEU
526
A
LEU
527
n
133
LEU
527
A
GLN
528
n
134
GLN
528
A
LEU
529
n
135
LEU
529
A
ALA
530
n
136
ALA
530
A
ALA
531
n
137
ALA
531
A
GLU
532
n
138
GLU
532
A
ALA
533
n
139
ALA
533
A
ALA
534
n
140
ALA
534
A
GLU
535
n
141
GLU
535
A
LEU
536
n
142
LEU
536
A
ALA
537
n
143
ALA
537
A
GLU
538
n
144
GLU
538
A
LYS
539
n
145
LYS
539
A
ALA
540
n
146
ALA
540
A
ARG
541
n
147
ARG
541
A
SER
542
n
148
SER
542
A
LYS
543
n
149
LYS
543
A
LYS
544
n
150
LYS
544
A
LEU
545
n
151
LEU
545
A
GLY
546
n
152
GLY
546
A
ALA
547
n
153
ALA
547
A
ASP
548
n
154
ASP
548
A
ALA
549
n
155
ALA
549
A
MET
550
n
156
MET
550
A
GLN
551
n
157
GLN
551
A
GLY
552
n
158
GLY
552
A
ALA
553
n
159
ALA
553
A
CYS
554
n
160
CYS
554
A
PHE
555
n
161
PHE
555
A
THR
556
n
162
THR
556
A
ILE
557
n
163
ILE
557
A
SER
558
n
164
SER
558
A
SER
559
n
165
SER
559
A
LEU
560
n
166
LEU
560
A
GLY
561
n
167
GLY
561
A
HIS
562
n
168
HIS
562
A
ILE
563
n
169
ILE
563
A
GLY
564
n
170
GLY
564
A
GLY
565
n
171
GLY
565
A
THR
566
n
172
THR
566
A
ALA
567
n
173
ALA
567
A
PHE
568
n
174
PHE
568
A
THR
569
n
175
THR
569
A
PRO
570
n
176
PRO
570
A
ILE
571
n
177
ILE
571
A
VAL
572
n
178
VAL
572
A
ASN
573
n
179
ASN
573
A
ALA
574
n
180
ALA
574
A
PRO
575
n
181
PRO
575
A
GLU
576
n
182
GLU
576
A
VAL
577
n
183
VAL
577
A
ALA
578
n
184
ALA
578
A
ILE
579
n
185
ILE
579
A
LEU
580
n
186
LEU
580
A
GLY
581
n
187
GLY
581
A
VAL
582
n
188
VAL
582
A
SER
583
n
189
SER
583
A
LYS
584
n
190
LYS
584
A
ALA
585
n
191
ALA
585
A
SER
586
n
192
SER
586
A
MET
587
n
193
MET
587
A
GLN
588
n
194
GLN
588
A
PRO
589
n
195
PRO
589
A
VAL
590
n
196
VAL
590
A
TRP
591
n
197
TRP
591
A
ASP
592
n
198
ASP
592
A
GLY
593
n
199
GLY
593
A
LYS
594
n
200
LYS
594
A
ALA
595
n
201
ALA
595
A
PHE
596
n
202
PHE
596
A
GLN
597
n
203
GLN
597
A
PRO
598
n
204
PRO
598
A
ARG
599
n
205
ARG
599
A
LEU
600
n
206
LEU
600
A
MET
601
n
207
MET
601
A
LEU
602
n
208
LEU
602
A
PRO
603
n
209
PRO
603
A
LEU
604
n
210
LEU
604
A
SER
605
n
211
SER
605
A
LEU
606
n
212
LEU
606
A
SER
607
n
213
SER
607
A
TYR
608
n
214
TYR
608
A
ASP
609
n
215
ASP
609
A
HIS
610
n
216
HIS
610
A
ARG
611
n
217
ARG
611
A
VAL
612
n
218
VAL
612
A
ILE
613
n
219
ILE
613
A
ASN
614
n
220
ASN
614
A
GLY
615
n
221
GLY
615
A
ALA
616
n
222
ALA
616
A
ALA
617
n
223
ALA
617
A
ALA
618
n
224
ALA
618
A
ALA
619
n
225
ALA
619
A
ARG
620
n
226
ARG
620
A
PHE
621
n
227
PHE
621
A
THR
622
n
228
THR
622
A
LYS
623
n
229
LYS
623
A
ARG
624
n
230
ARG
624
A
LEU
625
n
231
LEU
625
A
GLY
626
n
232
GLY
626
A
ASP
627
n
233
ASP
627
A
LEU
628
n
234
LEU
628
A
LEU
629
n
235
LEU
629
A
ALA
630
n
236
ALA
630
A
ASP
631
n
237
ASP
631
A
ILE
632
n
238
ILE
632
A
ARG
633
n
239
ARG
633
A
ALA
634
n
240
ALA
634
A
ILE
635
n
241
ILE
635
A
LEU
636
n
242
LEU
636
A
LEU
637
n
243
LEU
637
A
author_and_software_defined_assembly
PISA,PQS
24
24-meric
153530
-873
206600
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_555
-x,-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
x,-y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
5_555
z,x,y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
6_555
z,-x,-y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
7_555
-z,-x,y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
8_555
-z,x,-y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
9_555
y,z,x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
-1.0000000000
0.0000000000
0.0000000000
10_555
-y,z,-x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
-1.0000000000
0.0000000000
0.0000000000
11_555
y,-z,-x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
1.0000000000
0.0000000000
0.0000000000
12_555
-y,-z,x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
13_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
14_555
-y,-x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
15_555
y,-x,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
16_555
-y,x,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
-1.0000000000
0.0000000000
17_555
x,z,-y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
18_555
-x,z,y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
19_555
-x,-z,-y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
1.0000000000
0.0000000000
20_555
x,-z,y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
21_555
z,y,-x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
-1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
22_555
z,-y,x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
23_555
-z,y,x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
24_555
-z,-y,-x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
ARG
416
A
CG
ARG
22
1
Y
1
A
CD
ARG
416
A
CD
ARG
22
1
Y
1
A
NE
ARG
416
A
NE
ARG
22
1
Y
1
A
CZ
ARG
416
A
CZ
ARG
22
1
Y
1
A
NH1
ARG
416
A
NH1
ARG
22
1
Y
1
A
NH2
ARG
416
A
NH2
ARG
22
1
Y
1
A
CG
LYS
454
A
CG
LYS
60
1
Y
1
A
CD
LYS
454
A
CD
LYS
60
1
Y
1
A
CE
LYS
454
A
CE
LYS
60
1
Y
1
A
NZ
LYS
454
A
NZ
LYS
60
1
Y
1
A
CG
LYS
458
A
CG
LYS
64
1
Y
1
A
CD
LYS
458
A
CD
LYS
64
1
Y
1
A
CE
LYS
458
A
CE
LYS
64
1
Y
1
A
NZ
LYS
458
A
NZ
LYS
64
1
Y
1
A
CG
LYS
459
A
CG
LYS
65
1
Y
1
A
CD
LYS
459
A
CD
LYS
65
1
Y
1
A
CE
LYS
459
A
CE
LYS
65
1
Y
1
A
NZ
LYS
459
A
NZ
LYS
65
1
Y
1
A
CG
GLN
493
A
CG
GLN
99
1
Y
1
A
CD
GLN
493
A
CD
GLN
99
1
Y
1
A
OE1
GLN
493
A
OE1
GLN
99
1
Y
1
A
NE2
GLN
493
A
NE2
GLN
99
1
Y
1
A
CG
GLU
538
A
CG
GLU
144
1
Y
1
A
CD
GLU
538
A
CD
GLU
144
1
Y
1
A
OE1
GLU
538
A
OE1
GLU
144
1
Y
1
A
OE2
GLU
538
A
OE2
GLU
144
1
Y
1
A
CG
LYS
544
A
CG
LYS
150
1
Y
1
A
CD
LYS
544
A
CD
LYS
150
1
Y
1
A
CE
LYS
544
A
CE
LYS
150
1
Y
1
A
NZ
LYS
544
A
NZ
LYS
150
1
Y
1
A
C1
LPM
639
C
C1
LPM
0
N
1
A
O
LPM
639
C
O
LPM
0
N
1
A
N
LPM
639
C
N
LPM
0
N
1
-3.11
0.50
120.30
117.19
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
427
427
427
N
1
5.35
0.80
106.30
111.65
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
429
429
429
N
1
-5.17
0.80
107.30
102.13
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
429
429
429
N
1
-14.77
2.20
113.40
98.63
A
A
A
CA
CB
CG
ARG
ARG
ARG
497
497
497
N
1
-3.86
0.50
120.30
116.44
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
519
519
519
N
1
15.39
2.20
113.40
128.79
A
A
A
CA
CB
CG
GLU
GLU
GLU
535
535
535
N
1
3.38
0.50
120.30
123.68
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
541
541
541
N
1
-4.06
0.50
120.30
116.24
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
541
541
541
N
1
-13.55
2.20
111.50
97.95
A
A
A
N
CA
CB
VAL
VAL
VAL
577
577
577
N
1
14.70
2.30
115.30
130.00
A
A
A
CA
CB
CG
LEU
LEU
LEU
580
580
580
N
1
-12.08
1.60
100.20
88.12
A
A
A
CG
SD
CE
MET
MET
MET
587
587
587
N
1
6.34
0.80
106.30
112.64
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
591
591
591
N
1
-5.63
0.80
107.30
101.67
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
591
591
591
N
1
3.09
0.50
120.30
123.39
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
599
599
599
N
1
3.38
0.50
120.30
123.68
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
620
620
620
N
1
3.79
0.50
120.30
124.09
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
624
624
624
N
1
26.17
2.30
115.30
141.47
A
A
A
CA
CB
CG
LEU
LEU
LEU
637
637
637
N
1
A
A
NE2
CD2
HIS
HIS
502
502
-0.082
0.011
1.373
1.291
N
1
A
A
NE2
CD2
HIS
HIS
562
562
-0.069
0.011
1.373
1.304
N
1
A
A
OD1
OD1
ASP
ASP
402
402
1.84
1_555
28_555
1
A
THR
465
-93.02
-159.81
1
A
LEU
481
-116.78
74.60
1
A
ASN
485
-107.84
53.57
1
A
LYS
543
59.00
16.29
1
A
ALA
567
169.98
163.08
1
A
SER
583
-117.56
-163.90
1
A
LYS
594
-131.99
-41.78
0.1980000
0.1980000
2.6
10.0
1
0.0
2.6
10.0
42
1918
60
0
1816
0.017
3.5
26.3
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
ATOMIC STRUCTURE OF THE CUBIC CORE OF THE PYRUVATE DEHYDROGENASE MULTIENZYME COMPLEX
1
N
N
2
N
N
3
N
N
4
N
N
A
ARG
416
A
ARG
22
HELX_P
A
ASN
431
A
ASN
37
1
1
16
A
THR
444
A
THR
50
HELX_P
A
LYS
459
A
LYS
65
1
2
16
A
VAL
466
A
VAL
72
HELX_P
A
GLU
480
A
GLU
86
1
3
15
A
LEU
526
A
LEU
132
HELX_P
A
ARG
541
A
ARG
147
1
4
16
A
GLY
615
A
GLY
221
HELX_P
A
ALA
630
A
ALA
236
1
5
16
A
ILE
632
A
ILE
238
HELX_P
A
LEU
637
A
LEU
243
5
6
6
DIHYDROLIPOAMIDE ACETYLTRANSFERASE
DIHYDROLIPOAMIDE ACETYLTRANSFERASE
A
ALA
574
A
ALA
180
1
A
PRO
575
A
PRO
181
16.22
ODP2_AZOVI
UNP
1
1
P10802
SEIIRVPDIGGDGEVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEPAAGAAA
APAEAAAVPAAPTQAVDEAEAPSPGASATPAPAAASQEVRVPDIGSAGKARVIEVLVKAGDQVQAEQSLIVLESDKASME
IPSPASGVVESVAIQLNAEVGTGDLILTLRTTGAQAQPTAPAAAAAASPAPAPLAPAAAGPQEVKVPDIGSAGKARVIEV
LVKAGDQVQAEQSLIVLESDKASMEIPSPAAGVVESVAVQLNAEVGTGDQILTLRVAGAAPSGPRARGSPGQAAAAPGAA
PAPAPVGAPSRNGAKVHAGPAVRQLAREFGVELAAINSTGPRGRILKEDVQAYVKAMMQKAKEAPAAGAASGAGIPPIPP
VDFAKYGEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAEKAGVKLTVLPLLLKACAYLLKE
LPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSL
GHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGDLLADIRAILL
395
637
1EAB
395
637
P10802
A
1
1
243
1
GLU
conflict
LYS
458
1EAB
A
P10802
UNP
458
64
2
6
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
A
SER
486
A
SER
92
A
LEU
488
A
LEU
94
A
LEU
495
A
LEU
101
A
LYS
499
A
LYS
105
A
HIS
434
A
HIS
40
A
ASP
442
A
ASP
48
A
PHE
596
A
PHE
202
A
ASP
609
A
ASP
215
A
ALA
578
A
ALA
184
A
TRP
591
A
TRP
197
A
PHE
555
A
PHE
161
A
LEU
560
A
LEU
166
A
ILE
503
A
ILE
109
A
ASP
508
A
ASP
114
A
LEU
513
A
LEU
119
A
ILE
518
A
ILE
124
BINDING SITE FOR RESIDUE COA A 638
A
COA
638
Software
14
BINDING SITE FOR RESIDUE LPM A 639
A
LPM
639
Software
7
A
LYS
463
A
LYS
69
14
5_555
A
THR
465
A
THR
71
14
5_555
A
VAL
466
A
VAL
72
14
5_555
A
LEU
467
A
LEU
73
14
5_555
A
ALA
506
A
ALA
112
14
5_555
A
ALA
537
A
ALA
143
14
5_555
A
ARG
541
A
ARG
147
14
5_555
A
SER
559
A
SER
165
14
5_555
A
GLY
561
A
GLY
167
14
5_555
A
SER
583
A
SER
189
14
5_555
A
LYS
584
A
LYS
190
14
5_555
A
ALA
585
A
ALA
191
14
5_555
A
LEU
602
A
LEU
208
14
5_555
A
HOH
661
D
HOH
14
5_555
A
LEU
425
A
LEU
31
7
5_555
A
LEU
513
A
LEU
119
7
5_555
A
PRO
570
A
PRO
176
7
5_555
A
ILE
571
A
ILE
177
7
5_555
A
ASN
573
A
ASN
179
7
5_555
A
ILE
579
A
ILE
185
7
5_555
A
HIS
610
A
HIS
216
7
1_555
209
F 4 3 2