1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Peterson, R.D. Feigon, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 264 863 877 10.1006/jmbi.1996.0683 9000617 Structural change in Rev responsive element RNA of HIV-1 on binding Rev peptide. 1996 10.2210/pdb1ebq/pdb pdb_00001ebq 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 9362.595 HIV-1 REV RESPONSIVE ELEMENT RNA 1 syn polymer no no GGUGGGCGCAGCUUCGGCUGCGGUACACC GGUGGGCGCAGCUUCGGCUGCGGUACACC A polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n -4.567 1 19 A 1 A 29 -2.029 A_G1:C29_A 1 -4.217 -1.018 0.050 -0.453 -0.344 1 19 A 2 A 28 -2.037 A_G2:C28_A 2 -4.998 -0.977 0.026 -0.429 0.452 1 20 A 3 A 27 -1.526 A_U3:A27_A 3 -9.438 0.014 0.121 -0.111 -4.288 1 19 A 4 A 26 -3.024 A_G4:C26_A 4 -13.462 -0.073 0.145 -0.148 1.853 8 A 5 A 25 -18.152 A_G5:A25_A 5 -5.427 -0.083 0.226 1.467 -6.254 3 A 6 A 23 -175.383 A_G6:G23_A 6 3.224 1.212 -0.167 1.661 5.313 1 19 A 7 A 22 -0.843 A_C7:G22_A 7 -5.155 -0.436 0.073 -0.090 -0.647 1 19 A 8 A 21 -1.521 A_G8:C21_A 8 -4.576 -0.422 0.011 -0.174 0.073 1 19 A 9 A 20 -0.745 A_C9:G20_A 9 -6.078 0.777 -0.174 -0.319 7.662 1 20 A 10 A 19 0.565 A_A10:U19_A 10 0.872 0.126 0.213 -0.089 -4.620 1 19 A 11 A 18 -0.894 A_G11:C18_A 11 -0.048 -0.206 -0.463 -0.130 -1.618 1 19 A 12 A 17 -1.781 A_C12:G17_A 12 5.668 0.992 -0.243 -0.461 -1.794 2 A 13 A 16 -107.297 A_U13:G16_A 13 -7.048 0.719 0.166 -4.630 2.755 37.017 A A 1 2 24.036 A A 29 28 3.338 14.826 -0.262 -0.842 AA_G1G2:C28C29_AA 1 -4.220 6.842 33.758 -3.276 -0.143 2.891 40.158 A A 2 3 20.709 A A 28 27 3.316 13.946 -0.103 -0.701 AA_G2U3:A27C28_AA 2 -0.748 1.111 37.745 -2.578 0.066 2.691 39.049 A A 3 4 26.441 A A 27 26 3.337 17.116 0.015 -0.778 AA_U3G4:C26A27_AA 3 0.610 -0.942 35.225 -3.172 0.050 3.222 36.455 A A 4 5 5.341 A A 26 25 3.300 3.335 -0.444 -0.381 AA_G4G5:A25C26_AA 4 2.183 -3.496 36.244 -1.071 1.012 3.039 99.837 A A 5 6 11.426 A A 25 23 3.288 17.407 -1.626 -0.335 AA_G5G6:G23A25_AA 5 13.359 -8.769 98.029 -0.488 1.269 3.650 -44.056 A A 6 7 -21.727 A A 23 22 4.236 15.961 0.486 0.956 AA_G6C7:G22G23_AA 6 -0.789 -1.075 -41.190 -3.155 0.555 2.193 39.056 A A 7 8 38.967 A A 22 21 3.473 24.267 0.184 -0.929 AA_C7G8:C21G22_AA 7 -1.031 1.655 30.819 -4.252 -0.397 2.972 41.022 A A 8 9 20.648 A A 21 20 3.383 14.192 0.136 -0.662 AA_G8C9:G20C21_AA 8 1.465 -2.131 38.562 -2.498 -0.034 2.139 31.551 A A 9 10 26.865 A A 20 19 3.001 14.103 0.119 -1.243 AA_C9A10:U19G20_AA 9 -2.100 4.000 28.219 -4.468 -0.545 2.362 31.603 A A 10 11 32.746 A A 19 18 3.847 16.931 -0.037 -1.714 AA_A10G11:C18U19_AA 10 1.730 -3.346 26.727 -6.390 0.399 2.561 39.982 A A 11 12 27.486 A A 18 17 3.404 18.147 -0.357 -1.165 AA_G11C12:G17C18_AA 11 -2.216 3.357 35.711 -3.723 0.276 2.765 99.731 A A 12 13 6.856 A A 17 16 2.867 10.469 0.606 -1.545 AA_C12U13:G16G17_AA 12 6.614 -4.332 99.163 -1.153 -0.306 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1997-07-07 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site ENSEMBLE OF 5 STRUCTURES ENSEMBLE OF 5 STRUCTURES Y BNL 1997-03-20 REL 5 6.0 K BRUNGER refinement X-PLOR 3.1 G 1 n 1 G 1 A G 2 n 2 G 2 A U 3 n 3 U 3 A G 4 n 4 G 4 A G 5 n 5 G 5 A G 6 n 6 G 6 A C 7 n 7 C 7 A G 8 n 8 G 8 A C 9 n 9 C 9 A A 10 n 10 A 10 A G 11 n 11 G 11 A C 12 n 12 C 12 A U 13 n 13 U 13 A U 14 n 14 U 14 A C 15 n 15 C 15 A G 16 n 16 G 16 A G 17 n 17 G 17 A C 18 n 18 C 18 A U 19 n 19 U 19 A G 20 n 20 G 20 A C 21 n 21 C 21 A G 22 n 22 G 22 A G 23 n 23 G 23 A U 24 n 24 U 24 A A 25 n 25 A 25 A C 26 n 26 C 26 A A 27 n 27 A 27 A C 28 n 28 C 28 A C 29 n 29 C 29 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A HO2' N3 C G 15 16 1.37 1 A A O2 H1 U G 13 16 1.38 1 A A HO2' O5' G G 5 6 1.41 1 A A HO2' O6 U G 13 16 1.49 2 A A HO2' O5' G G 5 6 1.35 2 A A HO2' O6 U G 13 16 1.49 2 A A O2 H1 U G 13 16 1.50 2 A A HO2' OP2 U A 24 25 1.51 2 A A HO2' O4' C G 15 16 1.58 2 A A HO2' O5' G C 6 7 1.58 3 A A O2 H1 U G 13 16 1.40 3 A A HO2' O6 U G 13 16 1.46 3 A A HO2' O5' G C 6 7 1.52 3 A A HO2' O4' G G 4 5 1.57 4 A A HO2' O5' U C 14 15 1.47 4 A A HO2' O5' G G 5 6 1.47 4 A A O2 H1 U G 13 16 1.50 4 A A HO2' N3 C G 15 16 1.60 5 A A O2 H1 U G 13 16 1.40 5 A A HO2' O6 U G 13 16 1.43 5 A A HO2' O4' C G 15 16 1.57 1 -3.86 0.50 104.30 100.44 A A A C5 N7 C8 G G G 1 1 1 N 1 7.00 0.50 113.10 120.10 A A A N7 C8 N9 G G G 1 1 1 N 1 -3.87 0.40 106.40 102.53 A A A C8 N9 C4 G G G 1 1 1 N 1 -4.01 0.50 104.30 100.29 A A A C5 N7 C8 G G G 2 2 2 N 1 7.02 0.50 113.10 120.12 A A A N7 C8 N9 G G G 2 2 2 N 1 -3.78 0.40 106.40 102.62 A A A C8 N9 C4 G G G 2 2 2 N 1 -4.02 0.50 104.30 100.28 A A A C5 N7 C8 G G G 4 4 4 N 1 7.04 0.50 113.10 120.14 A A A N7 C8 N9 G G G 4 4 4 N 1 -3.79 0.40 106.40 102.61 A A A C8 N9 C4 G G G 4 4 4 N 1 -3.96 0.50 104.30 100.34 A A A C5 N7 C8 G G G 5 5 5 N 1 7.01 0.50 113.10 120.11 A A A N7 C8 N9 G G G 5 5 5 N 1 -3.79 0.40 106.40 102.61 A A A C8 N9 C4 G G G 5 5 5 N 1 -4.02 0.50 104.30 100.28 A A A C5 N7 C8 G G G 6 6 6 N 1 7.18 0.50 113.10 120.28 A A A N7 C8 N9 G G G 6 6 6 N 1 -3.90 0.40 106.40 102.50 A A A C8 N9 C4 G G G 6 6 6 N 1 -4.02 0.50 104.30 100.28 A A A C5 N7 C8 G G G 8 8 8 N 1 6.91 0.50 113.10 120.01 A A A N7 C8 N9 G G G 8 8 8 N 1 -3.82 0.40 106.40 102.58 A A A C8 N9 C4 G G G 8 8 8 N 1 -3.73 0.50 103.90 100.17 A A A C5 N7 C8 A A A 10 10 10 N 1 6.16 0.50 113.80 119.96 A A A N7 C8 N9 A A A 10 10 10 N 1 -3.34 0.40 105.80 102.46 A A A C8 N9 C4 A A A 10 10 10 N 1 -3.95 0.50 104.30 100.35 A A A C5 N7 C8 G G G 11 11 11 N 1 6.78 0.50 113.10 119.88 A A A N7 C8 N9 G G G 11 11 11 N 1 -3.79 0.40 106.40 102.61 A A A C8 N9 C4 G G G 11 11 11 N 1 -3.95 0.50 104.30 100.35 A A A C5 N7 C8 G G G 16 16 16 N 1 7.10 0.50 113.10 120.20 A A A N7 C8 N9 G G G 16 16 16 N 1 -3.90 0.40 106.40 102.50 A A A C8 N9 C4 G G G 16 16 16 N 1 -3.90 0.50 104.30 100.40 A A A C5 N7 C8 G G G 17 17 17 N 1 6.99 0.50 113.10 120.09 A A A N7 C8 N9 G G G 17 17 17 N 1 -3.86 0.40 106.40 102.54 A A A C8 N9 C4 G G G 17 17 17 N 1 -3.97 0.50 104.30 100.33 A A A C5 N7 C8 G G G 20 20 20 N 1 6.92 0.50 113.10 120.02 A A A N7 C8 N9 G G G 20 20 20 N 1 -3.83 0.40 106.40 102.57 A A A C8 N9 C4 G G G 20 20 20 N 1 -4.07 0.50 104.30 100.23 A A A C5 N7 C8 G G G 22 22 22 N 1 6.86 0.50 113.10 119.96 A A A N7 C8 N9 G G G 22 22 22 N 1 -3.71 0.40 106.40 102.69 A A A C8 N9 C4 G G G 22 22 22 N 1 4.23 0.70 108.50 112.73 A A A O4' C1' N9 G G G 23 23 23 N 1 -3.91 0.50 104.30 100.39 A A A C5 N7 C8 G G G 23 23 23 N 1 7.18 0.50 113.10 120.28 A A A N7 C8 N9 G G G 23 23 23 N 1 -3.98 0.40 106.40 102.42 A A A C8 N9 C4 G G G 23 23 23 N 1 -3.71 0.50 103.90 100.19 A A A C5 N7 C8 A A A 25 25 25 N 1 6.11 0.50 113.80 119.91 A A A N7 C8 N9 A A A 25 25 25 N 1 -3.32 0.40 105.80 102.48 A A A C8 N9 C4 A A A 25 25 25 N 1 -3.74 0.50 103.90 100.16 A A A C5 N7 C8 A A A 27 27 27 N 1 6.21 0.50 113.80 120.01 A A A N7 C8 N9 A A A 27 27 27 N 1 -3.30 0.40 105.80 102.50 A A A C8 N9 C4 A A A 27 27 27 N 2 -3.91 0.50 104.30 100.39 A A A C5 N7 C8 G G G 1 1 1 N 2 6.98 0.50 113.10 120.08 A A A N7 C8 N9 G G G 1 1 1 N 2 -3.87 0.40 106.40 102.53 A A A C8 N9 C4 G G G 1 1 1 N 2 -3.98 0.50 104.30 100.32 A A A C5 N7 C8 G G G 2 2 2 N 2 7.01 0.50 113.10 120.11 A A A N7 C8 N9 G G G 2 2 2 N 2 -3.75 0.40 106.40 102.65 A A A C8 N9 C4 G G G 2 2 2 N 2 -4.01 0.50 104.30 100.29 A A A C5 N7 C8 G G G 4 4 4 N 2 6.98 0.50 113.10 120.08 A A A N7 C8 N9 G G G 4 4 4 N 2 -3.79 0.40 106.40 102.61 A A A C8 N9 C4 G G G 4 4 4 N 2 -3.86 0.50 104.30 100.44 A A A C5 N7 C8 G G G 5 5 5 N 2 7.06 0.50 113.10 120.16 A A A N7 C8 N9 G G G 5 5 5 N 2 -3.96 0.40 106.40 102.44 A A A C8 N9 C4 G G G 5 5 5 N 2 4.99 0.80 101.50 106.49 A A A C3' C2' C1' G G G 6 6 6 N 2 -3.97 0.50 104.30 100.33 A A A C5 N7 C8 G G G 6 6 6 N 2 6.93 0.50 113.10 120.03 A A A N7 C8 N9 G G G 6 6 6 N 2 -3.78 0.40 106.40 102.62 A A A C8 N9 C4 G G G 6 6 6 N 2 -3.96 0.50 104.30 100.34 A A A C5 N7 C8 G G G 8 8 8 N 2 6.94 0.50 113.10 120.04 A A A N7 C8 N9 G G G 8 8 8 N 2 -3.77 0.40 106.40 102.63 A A A C8 N9 C4 G G G 8 8 8 N 2 -3.72 0.50 103.90 100.18 A A A C5 N7 C8 A A A 10 10 10 N 2 6.30 0.50 113.80 120.10 A A A N7 C8 N9 A A A 10 10 10 N 2 -3.40 0.40 105.80 102.40 A A A C8 N9 C4 A A A 10 10 10 N 2 -4.06 0.50 104.30 100.24 A A A C5 N7 C8 G G G 11 11 11 N 2 7.04 0.50 113.10 120.14 A A A N7 C8 N9 G G G 11 11 11 N 2 -3.80 0.40 106.40 102.60 A A A C8 N9 C4 G G G 11 11 11 N 2 -4.06 0.50 104.30 100.24 A A A C5 N7 C8 G G G 16 16 16 N 2 7.22 0.50 113.10 120.32 A A A N7 C8 N9 G G G 16 16 16 N 2 -3.88 0.40 106.40 102.52 A A A C8 N9 C4 G G G 16 16 16 N 2 -3.95 0.50 104.30 100.35 A A A C5 N7 C8 G G G 17 17 17 N 2 7.07 0.50 113.10 120.17 A A A N7 C8 N9 G G G 17 17 17 N 2 -3.93 0.40 106.40 102.47 A A A C8 N9 C4 G G G 17 17 17 N 2 -4.13 0.50 104.30 100.17 A A A C5 N7 C8 G G G 20 20 20 N 2 7.12 0.50 113.10 120.22 A A A N7 C8 N9 G G G 20 20 20 N 2 -3.74 0.40 106.40 102.66 A A A C8 N9 C4 G G G 20 20 20 N 2 -4.04 0.50 104.30 100.26 A A A C5 N7 C8 G G G 22 22 22 N 2 7.02 0.50 113.10 120.12 A A A N7 C8 N9 G G G 22 22 22 N 2 -3.82 0.40 106.40 102.58 A A A C8 N9 C4 G G G 22 22 22 N 2 -3.98 0.50 104.30 100.32 A A A C5 N7 C8 G G G 23 23 23 N 2 6.90 0.50 113.10 120.00 A A A N7 C8 N9 G G G 23 23 23 N 2 -3.78 0.40 106.40 102.62 A A A C8 N9 C4 G G G 23 23 23 N 2 -3.74 0.50 103.90 100.16 A A A C5 N7 C8 A A A 25 25 25 N 2 6.07 0.50 113.80 119.87 A A A N7 C8 N9 A A A 25 25 25 N 2 -3.26 0.40 105.80 102.54 A A A C8 N9 C4 A A A 25 25 25 N 2 -3.72 0.50 103.90 100.18 A A A C5 N7 C8 A A A 27 27 27 N 2 6.23 0.50 113.80 120.03 A A A N7 C8 N9 A A A 27 27 27 N 2 -3.36 0.40 105.80 102.44 A A A C8 N9 C4 A A A 27 27 27 N 3 -3.97 0.50 104.30 100.33 A A A C5 N7 C8 G G G 1 1 1 N 3 6.97 0.50 113.10 120.07 A A A N7 C8 N9 G G G 1 1 1 N 3 -3.78 0.40 106.40 102.62 A A A C8 N9 C4 G G G 1 1 1 N 3 -3.99 0.50 104.30 100.31 A A A C5 N7 C8 G G G 2 2 2 N 3 7.02 0.50 113.10 120.12 A A A N7 C8 N9 G G G 2 2 2 N 3 -3.80 0.40 106.40 102.60 A A A C8 N9 C4 G G G 2 2 2 N 3 -4.04 0.50 104.30 100.26 A A A C5 N7 C8 G G G 4 4 4 N 3 7.01 0.50 113.10 120.11 A A A N7 C8 N9 G G G 4 4 4 N 3 -3.80 0.40 106.40 102.60 A A A C8 N9 C4 G G G 4 4 4 N 3 -3.97 0.50 104.30 100.33 A A A C5 N7 C8 G G G 5 5 5 N 3 6.90 0.50 113.10 120.00 A A A N7 C8 N9 G G G 5 5 5 N 3 -3.76 0.40 106.40 102.64 A A A C8 N9 C4 G G G 5 5 5 N 3 4.31 0.70 108.50 112.81 A A A O4' C1' N9 G G G 6 6 6 N 3 -3.83 0.50 104.30 100.47 A A A C5 N7 C8 G G G 6 6 6 N 3 6.68 0.50 113.10 119.78 A A A N7 C8 N9 G G G 6 6 6 N 3 -3.78 0.40 106.40 102.62 A A A C8 N9 C4 G G G 6 6 6 N 3 -4.06 0.50 104.30 100.24 A A A C5 N7 C8 G G G 8 8 8 N 3 6.92 0.50 113.10 120.02 A A A N7 C8 N9 G G G 8 8 8 N 3 -3.71 0.40 106.40 102.69 A A A C8 N9 C4 G G G 8 8 8 N 3 -3.75 0.50 103.90 100.15 A A A C5 N7 C8 A A A 10 10 10 N 3 6.32 0.50 113.80 120.12 A A A N7 C8 N9 A A A 10 10 10 N 3 -3.46 0.40 105.80 102.34 A A A C8 N9 C4 A A A 10 10 10 N 3 -4.01 0.50 104.30 100.29 A A A C5 N7 C8 G G G 11 11 11 N 3 6.94 0.50 113.10 120.04 A A A N7 C8 N9 G G G 11 11 11 N 3 -3.81 0.40 106.40 102.59 A A A C8 N9 C4 G G G 11 11 11 N 3 -4.04 0.50 104.30 100.26 A A A C5 N7 C8 G G G 16 16 16 N 3 7.04 0.50 113.10 120.14 A A A N7 C8 N9 G G G 16 16 16 N 3 -3.87 0.40 106.40 102.53 A A A C8 N9 C4 G G G 16 16 16 N 3 -3.88 0.50 104.30 100.42 A A A C5 N7 C8 G G G 17 17 17 N 3 6.91 0.50 113.10 120.01 A A A N7 C8 N9 G G G 17 17 17 N 3 -3.84 0.40 106.40 102.56 A A A C8 N9 C4 G G G 17 17 17 N 3 -4.15 0.50 104.30 100.15 A A A C5 N7 C8 G G G 20 20 20 N 3 7.12 0.50 113.10 120.22 A A A N7 C8 N9 G G G 20 20 20 N 3 -3.85 0.40 106.40 102.55 A A A C8 N9 C4 G G G 20 20 20 N 3 -3.99 0.50 104.30 100.31 A A A C5 N7 C8 G G G 22 22 22 N 3 6.89 0.50 113.10 119.99 A A A N7 C8 N9 G G G 22 22 22 N 3 -3.74 0.40 106.40 102.66 A A A C8 N9 C4 G G G 22 22 22 N 3 -3.94 0.50 104.30 100.36 A A A C5 N7 C8 G G G 23 23 23 N 3 7.21 0.50 113.10 120.31 A A A N7 C8 N9 G G G 23 23 23 N 3 -3.91 0.40 106.40 102.49 A A A C8 N9 C4 G G G 23 23 23 N 3 -3.84 0.50 103.90 100.06 A A A C5 N7 C8 A A A 25 25 25 N 3 6.36 0.50 113.80 120.16 A A A N7 C8 N9 A A A 25 25 25 N 3 -3.39 0.40 105.80 102.41 A A A C8 N9 C4 A A A 25 25 25 N 3 -3.72 0.50 103.90 100.18 A A A C5 N7 C8 A A A 27 27 27 N 3 6.23 0.50 113.80 120.03 A A A N7 C8 N9 A A A 27 27 27 N 3 -3.33 0.40 105.80 102.47 A A A C8 N9 C4 A A A 27 27 27 N 4 -3.99 0.50 104.30 100.31 A A A C5 N7 C8 G G G 1 1 1 N 4 7.03 0.50 113.10 120.13 A A A N7 C8 N9 G G G 1 1 1 N 4 -3.82 0.40 106.40 102.58 A A A C8 N9 C4 G G G 1 1 1 N 4 -3.90 0.50 104.30 100.40 A A A C5 N7 C8 G G G 2 2 2 N 4 6.96 0.50 113.10 120.06 A A A N7 C8 N9 G G G 2 2 2 N 4 -3.82 0.40 106.40 102.58 A A A C8 N9 C4 G G G 2 2 2 N 4 -3.98 0.50 104.30 100.32 A A A C5 N7 C8 G G G 4 4 4 N 4 6.92 0.50 113.10 120.02 A A A N7 C8 N9 G G G 4 4 4 N 4 -3.80 0.40 106.40 102.60 A A A C8 N9 C4 G G G 4 4 4 N 4 -3.92 0.50 104.30 100.38 A A A C5 N7 C8 G G G 5 5 5 N 4 7.12 0.50 113.10 120.22 A A A N7 C8 N9 G G G 5 5 5 N 4 -3.87 0.40 106.40 102.53 A A A C8 N9 C4 G G G 5 5 5 N 4 -4.09 0.50 104.30 100.21 A A A C5 N7 C8 G G G 6 6 6 N 4 6.99 0.50 113.10 120.09 A A A N7 C8 N9 G G G 6 6 6 N 4 -3.81 0.40 106.40 102.59 A A A C8 N9 C4 G G G 6 6 6 N 4 -4.00 0.50 104.30 100.30 A A A C5 N7 C8 G G G 8 8 8 N 4 6.89 0.50 113.10 119.99 A A A N7 C8 N9 G G G 8 8 8 N 4 -3.77 0.40 106.40 102.63 A A A C8 N9 C4 G G G 8 8 8 N 4 -3.80 0.50 103.90 100.10 A A A C5 N7 C8 A A A 10 10 10 N 4 6.20 0.50 113.80 120.00 A A A N7 C8 N9 A A A 10 10 10 N 4 -3.31 0.40 105.80 102.49 A A A C8 N9 C4 A A A 10 10 10 N 4 -3.96 0.50 104.30 100.34 A A A C5 N7 C8 G G G 11 11 11 N 4 6.86 0.50 113.10 119.96 A A A N7 C8 N9 G G G 11 11 11 N 4 -3.77 0.40 106.40 102.63 A A A C8 N9 C4 G G G 11 11 11 N 4 -3.92 0.50 104.30 100.38 A A A C5 N7 C8 G G G 16 16 16 N 4 7.17 0.50 113.10 120.27 A A A N7 C8 N9 G G G 16 16 16 N 4 -3.92 0.40 106.40 102.48 A A A C8 N9 C4 G G G 16 16 16 N 4 -3.95 0.50 104.30 100.35 A A A C5 N7 C8 G G G 17 17 17 N 4 7.07 0.50 113.10 120.17 A A A N7 C8 N9 G G G 17 17 17 N 4 -3.87 0.40 106.40 102.53 A A A C8 N9 C4 G G G 17 17 17 N 4 -4.02 0.50 104.30 100.28 A A A C5 N7 C8 G G G 20 20 20 N 4 7.02 0.50 113.10 120.12 A A A N7 C8 N9 G G G 20 20 20 N 4 -3.81 0.40 106.40 102.59 A A A C8 N9 C4 G G G 20 20 20 N 4 -4.06 0.50 104.30 100.24 A A A C5 N7 C8 G G G 22 22 22 N 4 6.84 0.50 113.10 119.94 A A A N7 C8 N9 G G G 22 22 22 N 4 -3.64 0.40 106.40 102.76 A A A C8 N9 C4 G G G 22 22 22 N 4 4.23 0.70 108.50 112.73 A A A O4' C1' N9 G G G 23 23 23 N 4 -3.92 0.50 104.30 100.38 A A A C5 N7 C8 G G G 23 23 23 N 4 7.12 0.50 113.10 120.22 A A A N7 C8 N9 G G G 23 23 23 N 4 -3.94 0.40 106.40 102.46 A A A C8 N9 C4 G G G 23 23 23 N 4 -3.56 0.50 103.90 100.34 A A A C5 N7 C8 A A A 25 25 25 N 4 6.24 0.50 113.80 120.04 A A A N7 C8 N9 A A A 25 25 25 N 4 -3.46 0.40 105.80 102.34 A A A C8 N9 C4 A A A 25 25 25 N 4 -3.79 0.50 103.90 100.11 A A A C5 N7 C8 A A A 27 27 27 N 4 6.13 0.50 113.80 119.93 A A A N7 C8 N9 A A A 27 27 27 N 4 -3.30 0.40 105.80 102.50 A A A C8 N9 C4 A A A 27 27 27 N 5 -3.97 0.50 104.30 100.33 A A A C5 N7 C8 G G G 1 1 1 N 5 7.00 0.50 113.10 120.10 A A A N7 C8 N9 G G G 1 1 1 N 5 -3.79 0.40 106.40 102.61 A A A C8 N9 C4 G G G 1 1 1 N 5 -3.98 0.50 104.30 100.32 A A A C5 N7 C8 G G G 2 2 2 N 5 6.95 0.50 113.10 120.05 A A A N7 C8 N9 G G G 2 2 2 N 5 -3.71 0.40 106.40 102.69 A A A C8 N9 C4 G G G 2 2 2 N 5 -3.90 0.50 104.30 100.40 A A A C5 N7 C8 G G G 4 4 4 N 5 6.98 0.50 113.10 120.08 A A A N7 C8 N9 G G G 4 4 4 N 5 -3.88 0.40 106.40 102.52 A A A C8 N9 C4 G G G 4 4 4 N 5 -3.95 0.50 104.30 100.35 A A A C5 N7 C8 G G G 5 5 5 N 5 7.05 0.50 113.10 120.15 A A A N7 C8 N9 G G G 5 5 5 N 5 -3.76 0.40 106.40 102.64 A A A C8 N9 C4 G G G 5 5 5 N 5 4.87 0.80 101.50 106.37 A A A C3' C2' C1' G G G 6 6 6 N 5 -4.01 0.50 104.30 100.29 A A A C5 N7 C8 G G G 6 6 6 N 5 6.98 0.50 113.10 120.08 A A A N7 C8 N9 G G G 6 6 6 N 5 -3.76 0.40 106.40 102.64 A A A C8 N9 C4 G G G 6 6 6 N 5 -3.98 0.50 104.30 100.32 A A A C5 N7 C8 G G G 8 8 8 N 5 6.93 0.50 113.10 120.03 A A A N7 C8 N9 G G G 8 8 8 N 5 -3.79 0.40 106.40 102.61 A A A C8 N9 C4 G G G 8 8 8 N 5 -3.67 0.50 103.90 100.23 A A A C5 N7 C8 A A A 10 10 10 N 5 6.20 0.50 113.80 120.00 A A A N7 C8 N9 A A A 10 10 10 N 5 -3.33 0.40 105.80 102.47 A A A C8 N9 C4 A A A 10 10 10 N 5 -4.04 0.50 104.30 100.26 A A A C5 N7 C8 G G G 11 11 11 N 5 6.92 0.50 113.10 120.02 A A A N7 C8 N9 G G G 11 11 11 N 5 -3.76 0.40 106.40 102.64 A A A C8 N9 C4 G G G 11 11 11 N 5 -4.01 0.50 104.30 100.29 A A A C5 N7 C8 G G G 16 16 16 N 5 7.14 0.50 113.10 120.24 A A A N7 C8 N9 G G G 16 16 16 N 5 -3.84 0.40 106.40 102.56 A A A C8 N9 C4 G G G 16 16 16 N 5 -3.97 0.50 104.30 100.33 A A A C5 N7 C8 G G G 17 17 17 N 5 7.18 0.50 113.10 120.28 A A A N7 C8 N9 G G G 17 17 17 N 5 -3.95 0.40 106.40 102.45 A A A C8 N9 C4 G G G 17 17 17 N 5 -4.15 0.50 104.30 100.15 A A A C5 N7 C8 G G G 20 20 20 N 5 7.01 0.50 113.10 120.11 A A A N7 C8 N9 G G G 20 20 20 N 5 -3.72 0.40 106.40 102.68 A A A C8 N9 C4 G G G 20 20 20 N 5 -3.98 0.50 104.30 100.32 A A A C5 N7 C8 G G G 22 22 22 N 5 6.97 0.50 113.10 120.07 A A A N7 C8 N9 G G G 22 22 22 N 5 -3.82 0.40 106.40 102.58 A A A C8 N9 C4 G G G 22 22 22 N 5 -4.03 0.50 104.30 100.27 A A A C5 N7 C8 G G G 23 23 23 N 5 6.99 0.50 113.10 120.09 A A A N7 C8 N9 G G G 23 23 23 N 5 -3.79 0.40 106.40 102.61 A A A C8 N9 C4 G G G 23 23 23 N 5 -3.72 0.50 103.90 100.18 A A A C5 N7 C8 A A A 25 25 25 N 5 6.22 0.50 113.80 120.02 A A A N7 C8 N9 A A A 25 25 25 N 5 -3.31 0.40 105.80 102.49 A A A C8 N9 C4 A A A 25 25 25 N 5 -3.76 0.50 103.90 100.14 A A A C5 N7 C8 A A A 27 27 27 N 5 6.20 0.50 113.80 120.00 A A A N7 C8 N9 A A A 27 27 27 N 5 -3.30 0.40 105.80 102.50 A A A C8 N9 C4 A A A 27 27 27 N model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES 1 N N hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 A C 29 A N3 C 29 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 A C 29 A O2 C 29 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 A C 29 A N4 C 29 1_555 hydrog WATSON-CRICK A G 2 A N1 G 2 1_555 A C 28 A N3 C 28 1_555 hydrog WATSON-CRICK A G 2 A N2 G 2 1_555 A C 28 A O2 C 28 1_555 hydrog WATSON-CRICK A G 2 A O6 G 2 1_555 A C 28 A N4 C 28 1_555 hydrog WATSON-CRICK A U 3 A N3 U 3 1_555 A A 27 A N1 A 27 1_555 hydrog WATSON-CRICK A U 3 A O4 U 3 1_555 A A 27 A N6 A 27 1_555 hydrog WATSON-CRICK A G 4 A N1 G 4 1_555 A C 26 A N3 C 26 1_555 hydrog WATSON-CRICK A G 4 A N2 G 4 1_555 A C 26 A O2 C 26 1_555 hydrog WATSON-CRICK A G 4 A O6 G 4 1_555 A C 26 A N4 C 26 1_555 hydrog TYPE_8_PAIR A G 5 A N1 G 5 1_555 A A 25 A N1 A 25 1_555 hydrog TYPE_8_PAIR A G 5 A O6 G 5 1_555 A A 25 A N6 A 25 1_555 hydrog TYPE_3_PAIR A G 6 A N1 G 6 1_555 A G 23 A O6 G 23 1_555 hydrog TYPE_3_PAIR A G 6 A O6 G 6 1_555 A G 23 A N1 G 23 1_555 hydrog WATSON-CRICK A C 7 A N3 C 7 1_555 A G 22 A N1 G 22 1_555 hydrog WATSON-CRICK A C 7 A N4 C 7 1_555 A G 22 A O6 G 22 1_555 hydrog WATSON-CRICK A C 7 A O2 C 7 1_555 A G 22 A N2 G 22 1_555 hydrog WATSON-CRICK A G 8 A N1 G 8 1_555 A C 21 A N3 C 21 1_555 hydrog WATSON-CRICK A G 8 A N2 G 8 1_555 A C 21 A O2 C 21 1_555 hydrog WATSON-CRICK A G 8 A O6 G 8 1_555 A C 21 A N4 C 21 1_555 hydrog WATSON-CRICK A C 9 A N3 C 9 1_555 A G 20 A N1 G 20 1_555 hydrog WATSON-CRICK A C 9 A N4 C 9 1_555 A G 20 A O6 G 20 1_555 hydrog WATSON-CRICK A C 9 A O2 C 9 1_555 A G 20 A N2 G 20 1_555 hydrog WATSON-CRICK A A 10 A N1 A 10 1_555 A U 19 A N3 U 19 1_555 hydrog WATSON-CRICK A A 10 A N6 A 10 1_555 A U 19 A O4 U 19 1_555 hydrog WATSON-CRICK A G 11 A N1 G 11 1_555 A C 18 A N3 C 18 1_555 hydrog WATSON-CRICK A G 11 A N2 G 11 1_555 A C 18 A O2 C 18 1_555 hydrog WATSON-CRICK A G 11 A O6 G 11 1_555 A C 18 A N4 C 18 1_555 hydrog WATSON-CRICK A C 12 A N3 C 12 1_555 A G 17 A N1 G 17 1_555 hydrog WATSON-CRICK A C 12 A N4 C 12 1_555 A G 17 A O6 G 17 1_555 hydrog WATSON-CRICK A C 12 A O2 C 12 1_555 A G 17 A N2 G 17 1_555 hydrog U-G MISPAIR A U 13 A O2 U 13 1_555 A G 16 A N1 G 16 1_555 hydrog U-G MISPAIR A U 13 A O2 U 13 1_555 A G 17 A N1 G 17 1_555 RNA RIBONUCLEIC ACID, RNA 1EBQ PDB 1 1EBQ 1 29 1EBQ 1 29 1EBQ A 1 1 29 1 P 1