1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Peterson, R.D. Feigon, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 264 863 877 10.1006/jmbi.1996.0683 9000617 Structural change in Rev responsive element RNA of HIV-1 on binding Rev peptide. 1996 10.2210/pdb1ebr/pdb pdb_00001ebr 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 9691.801 HIV-1 REV RESPONSIVE ELEMENT RNA 1 syn polymer no no GGUGGGCGCAGCUUCGGCUGACGGUACACC GGUGGGCGCAGCUUCGGCUGACGGUACACC A polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n -0.388 1 19 A 1 A 30 -1.912 A_G1:C30_A 1 -2.454 -0.942 0.253 -0.444 -2.400 1 19 A 2 A 29 -1.124 A_G2:C29_A 2 -6.989 -0.892 -0.098 -0.380 4.097 1 20 A 3 A 28 0.435 A_U3:A28_A 3 -10.433 0.076 -0.050 -0.157 -8.995 1 19 A 4 A 27 -2.111 A_G4:C27_A 4 -16.945 -0.052 -0.084 -0.172 -0.111 8 A 5 A 26 -16.316 A_G5:A26_A 5 -5.917 -0.198 -0.049 1.526 -5.721 3 A 6 A 24 -173.634 A_G6:G24_A 6 4.515 1.118 0.015 1.319 1.622 1 19 A 7 A 23 -1.706 A_C7:G23_A 7 -0.150 1.016 -0.083 -0.461 6.564 1 19 A 8 A 22 -3.836 A_G8:C22_A 8 2.214 -0.511 0.420 -0.274 -5.053 1 19 A 9 A 20 -0.571 A_C9:G20_A 9 0.879 0.821 0.200 -0.355 0.799 1 20 A 10 A 19 -2.995 A_A10:U19_A 10 -6.978 -0.140 0.154 -0.130 -4.285 1 19 A 11 A 18 -0.235 A_G11:C18_A 11 -8.701 -0.081 -0.147 -0.137 -2.028 1 19 A 12 A 17 -1.262 A_C12:G17_A 12 -3.402 0.958 0.169 -0.439 -11.356 2 A 13 A 16 -119.194 A_U13:G16_A 13 -15.720 0.514 0.777 -4.693 2.617 37.423 A A 1 2 27.632 A A 30 29 3.402 17.112 -0.248 -0.978 AA_G1G2:C29C30_AA 1 -0.605 0.976 33.401 -3.723 0.309 2.744 38.543 A A 2 3 18.524 A A 29 28 3.053 12.038 0.021 -0.553 AA_G2U3:A28C29_AA 2 -0.378 0.582 36.682 -2.194 -0.074 2.559 42.684 A A 3 4 34.715 A A 28 27 3.533 23.920 0.007 -0.752 AA_U3G4:C27A28_AA 3 1.253 -1.818 35.593 -3.500 0.120 3.093 35.312 A A 4 5 -0.659 A A 27 26 3.138 -0.399 -0.241 -0.260 AA_G4G5:A26C27_AA 4 4.176 -6.899 35.069 -0.372 0.987 3.076 105.890 A A 5 6 -5.358 A A 26 24 3.130 -8.543 -0.495 1.276 AA_G5G6:G24A26_AA 5 -8.194 5.139 105.425 0.910 0.205 0.811 -33.405 A A 6 7 -38.013 A A 24 23 4.125 19.719 4.845 0.336 AA_G6C7:G23G24_AA 6 13.444 25.916 -23.546 -3.506 10.421 3.018 38.747 A A 7 8 37.879 A A 23 22 3.365 23.486 -0.271 0.499 AA_C7G8:C22G23_AA 7 -2.512 4.052 30.937 -2.401 0.071 3.562 58.936 A A 8 9 21.565 A A 22 20 3.064 20.767 3.660 0.605 AA_G8C9:G20C22_AA 8 8.682 -9.016 54.829 -0.516 -3.247 2.663 30.976 A A 9 10 17.572 A A 20 19 2.942 9.246 -1.183 -0.652 AA_C9A10:U19G20_AA 9 -1.111 2.111 29.575 -2.787 2.027 2.634 36.421 A A 10 11 28.337 A A 19 18 3.416 17.061 0.260 -0.897 AA_A10G11:C18U19_AA 10 0.392 -0.652 32.296 -3.770 -0.362 2.567 42.418 A A 11 12 28.359 A A 18 17 3.237 19.784 0.000 -0.715 AA_G11C12:G17C18_AA 11 -1.749 2.506 37.672 -2.893 -0.168 2.718 102.673 A A 12 13 5.701 A A 17 16 2.795 8.896 0.038 -1.149 AA_C12U13:G16G17_AA 12 4.097 -2.626 102.337 -0.846 0.026 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1997-07-07 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site ENSEMBLE OF 5 STRUCTURES ENSEMBLE OF 5 STRUCTURES Y BNL 1997-03-20 REL 5 BRUNGER refinement X-PLOR 3.1 G 1 n 1 G 1 A G 2 n 2 G 2 A U 3 n 3 U 3 A G 4 n 4 G 4 A G 5 n 5 G 5 A G 6 n 6 G 6 A C 7 n 7 C 7 A G 8 n 8 G 8 A C 9 n 9 C 9 A A 10 n 10 A 10 A G 11 n 11 G 11 A C 12 n 12 C 12 A U 13 n 13 U 13 A U 14 n 14 U 14 A C 15 n 15 C 15 A G 16 n 16 G 16 A G 17 n 17 G 17 A C 18 n 18 C 18 A U 19 n 19 U 19 A G 20 n 20 G 20 A A 21 n 21 A 21 A C 22 n 22 C 22 A G 23 n 23 G 23 A G 24 n 24 G 24 A U 25 n 25 U 25 A A 26 n 26 A 26 A C 27 n 27 C 27 A A 28 n 28 A 28 A C 29 n 29 C 29 A C 30 n 30 C 30 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A HO2' O5' C G 7 8 1.51 1 A A HO2' O5' C A 9 10 1.51 1 A A O2' H5 G C 20 22 1.52 1 A A HO2' O4' G C 6 7 1.57 2 A A HO2' O5' A C 26 27 1.36 2 A A O2 H21 U G 13 16 1.40 2 A A HO2' O5' C A 9 10 1.43 2 A A HO2' OP2 G G 5 6 1.46 2 A A O2' H5 G C 20 22 1.56 2 A A O2' H6 A C 26 27 1.56 2 A A HO2' O5' C G 7 8 1.57 3 A A HO2' O5' A C 21 22 1.32 3 A A HO2' O5' C A 9 10 1.33 3 A A HO2' O5' C G 15 16 1.39 3 A A HO2' O5' G G 23 24 1.43 3 A A HO2' O5' G U 24 25 1.47 3 A A HO2' O4' G C 8 9 1.50 3 A A HO2' O5' C G 7 8 1.60 3 A A O2 H21 U G 13 16 1.60 4 A A H3 O2' U C 13 15 1.31 4 A A HO2' O5' C G 15 16 1.32 4 A A HO2' O5' G G 23 24 1.35 4 A A HO2' O5' A C 26 27 1.40 4 A A HO2' O4' G C 6 7 1.43 4 A A O2' H6 A C 26 27 1.46 4 A A O2' H5 G C 20 22 1.50 4 A A HO2' O5' C A 9 10 1.52 4 A A HO2' O5' C G 7 8 1.53 4 A A HO2' OP2 G G 5 6 1.53 5 A A HO2' O5' C A 9 10 1.43 5 A A HO2' O5' C G 22 23 1.47 5 A A HO2' O5' G U 24 25 1.55 5 A A HO2' O5' C G 7 8 1.58 1 -3.95 0.50 104.30 100.35 A A A C5 N7 C8 G G G 1 1 1 N 1 6.99 0.50 113.10 120.09 A A A N7 C8 N9 G G G 1 1 1 N 1 -3.85 0.40 106.40 102.55 A A A C8 N9 C4 G G G 1 1 1 N 1 -4.00 0.50 104.30 100.30 A A A C5 N7 C8 G G G 2 2 2 N 1 6.98 0.50 113.10 120.08 A A A N7 C8 N9 G G G 2 2 2 N 1 -3.78 0.40 106.40 102.62 A A A C8 N9 C4 G G G 2 2 2 N 1 -4.00 0.50 104.30 100.30 A A A C5 N7 C8 G G G 4 4 4 N 1 7.01 0.50 113.10 120.11 A A A N7 C8 N9 G G G 4 4 4 N 1 -3.82 0.40 106.40 102.58 A A A C8 N9 C4 G G G 4 4 4 N 1 -3.84 0.50 104.30 100.46 A A A C5 N7 C8 G G G 5 5 5 N 1 7.14 0.50 113.10 120.24 A A A N7 C8 N9 G G G 5 5 5 N 1 -4.05 0.40 106.40 102.35 A A A C8 N9 C4 G G G 5 5 5 N 1 -4.15 0.50 104.30 100.15 A A A C5 N7 C8 G G G 6 6 6 N 1 6.89 0.50 113.10 119.99 A A A N7 C8 N9 G G G 6 6 6 N 1 -3.74 0.40 106.40 102.66 A A A C8 N9 C4 G G G 6 6 6 N 1 -3.95 0.50 104.30 100.35 A A A C5 N7 C8 G G G 8 8 8 N 1 7.16 0.50 113.10 120.26 A A A N7 C8 N9 G G G 8 8 8 N 1 -3.86 0.40 106.40 102.54 A A A C8 N9 C4 G G G 8 8 8 N 1 -3.72 0.50 103.90 100.18 A A A C5 N7 C8 A A A 10 10 10 N 1 6.38 0.50 113.80 120.18 A A A N7 C8 N9 A A A 10 10 10 N 1 -3.41 0.40 105.80 102.39 A A A C8 N9 C4 A A A 10 10 10 N 1 -3.99 0.50 104.30 100.31 A A A C5 N7 C8 G G G 11 11 11 N 1 7.00 0.50 113.10 120.10 A A A N7 C8 N9 G G G 11 11 11 N 1 -3.78 0.40 106.40 102.62 A A A C8 N9 C4 G G G 11 11 11 N 1 -3.87 0.50 104.30 100.43 A A A C5 N7 C8 G G G 16 16 16 N 1 7.04 0.50 113.10 120.14 A A A N7 C8 N9 G G G 16 16 16 N 1 -3.91 0.40 106.40 102.49 A A A C8 N9 C4 G G G 16 16 16 N 1 -4.02 0.50 104.30 100.28 A A A C5 N7 C8 G G G 17 17 17 N 1 7.00 0.50 113.10 120.10 A A A N7 C8 N9 G G G 17 17 17 N 1 -3.72 0.40 106.40 102.68 A A A C8 N9 C4 G G G 17 17 17 N 1 5.00 0.80 101.50 106.50 A A A C3' C2' C1' G G G 20 20 20 N 1 -3.96 0.50 104.30 100.34 A A A C5 N7 C8 G G G 20 20 20 N 1 6.84 0.50 113.10 119.94 A A A N7 C8 N9 G G G 20 20 20 N 1 -3.76 0.40 106.40 102.64 A A A C8 N9 C4 G G G 20 20 20 N 1 -3.62 0.50 103.90 100.28 A A A C5 N7 C8 A A A 21 21 21 N 1 6.28 0.50 113.80 120.08 A A A N7 C8 N9 A A A 21 21 21 N 1 -3.64 0.40 105.80 102.16 A A A C8 N9 C4 A A A 21 21 21 N 1 4.93 0.80 101.50 106.43 A A A C3' C2' C1' C C C 22 22 22 N 1 -3.98 0.50 104.30 100.32 A A A C5 N7 C8 G G G 23 23 23 N 1 6.98 0.50 113.10 120.08 A A A N7 C8 N9 G G G 23 23 23 N 1 -3.73 0.40 106.40 102.67 A A A C8 N9 C4 G G G 23 23 23 N 1 -4.00 0.50 104.30 100.30 A A A C5 N7 C8 G G G 24 24 24 N 1 7.02 0.50 113.10 120.12 A A A N7 C8 N9 G G G 24 24 24 N 1 -4.03 0.40 106.40 102.37 A A A C8 N9 C4 G G G 24 24 24 N 1 -3.82 0.50 103.90 100.08 A A A C5 N7 C8 A A A 26 26 26 N 1 6.04 0.50 113.80 119.84 A A A N7 C8 N9 A A A 26 26 26 N 1 -3.26 0.40 105.80 102.54 A A A C8 N9 C4 A A A 26 26 26 N 1 -3.86 0.50 103.90 100.04 A A A C5 N7 C8 A A A 28 28 28 N 1 6.24 0.50 113.80 120.04 A A A N7 C8 N9 A A A 28 28 28 N 1 -3.31 0.40 105.80 102.49 A A A C8 N9 C4 A A A 28 28 28 N 2 -3.90 0.50 104.30 100.40 A A A C5 N7 C8 G G G 1 1 1 N 2 7.00 0.50 113.10 120.10 A A A N7 C8 N9 G G G 1 1 1 N 2 -3.87 0.40 106.40 102.53 A A A C8 N9 C4 G G G 1 1 1 N 2 -3.90 0.50 104.30 100.40 A A A C5 N7 C8 G G G 2 2 2 N 2 6.92 0.50 113.10 120.02 A A A N7 C8 N9 G G G 2 2 2 N 2 -3.71 0.40 106.40 102.69 A A A C8 N9 C4 G G G 2 2 2 N 2 -4.03 0.50 104.30 100.27 A A A C5 N7 C8 G G G 4 4 4 N 2 7.04 0.50 113.10 120.14 A A A N7 C8 N9 G G G 4 4 4 N 2 -3.74 0.40 106.40 102.66 A A A C8 N9 C4 G G G 4 4 4 N 2 -3.96 0.50 104.30 100.34 A A A C5 N7 C8 G G G 5 5 5 N 2 6.99 0.50 113.10 120.09 A A A N7 C8 N9 G G G 5 5 5 N 2 -3.88 0.40 106.40 102.52 A A A C8 N9 C4 G G G 5 5 5 N 2 -4.15 0.50 104.30 100.15 A A A C5 N7 C8 G G G 6 6 6 N 2 6.83 0.50 113.10 119.93 A A A N7 C8 N9 G G G 6 6 6 N 2 -3.78 0.40 106.40 102.62 A A A C8 N9 C4 G G G 6 6 6 N 2 -3.96 0.50 104.30 100.34 A A A C5 N7 C8 G G G 8 8 8 N 2 7.04 0.50 113.10 120.14 A A A N7 C8 N9 G G G 8 8 8 N 2 -3.81 0.40 106.40 102.59 A A A C8 N9 C4 G G G 8 8 8 N 2 -3.69 0.50 103.90 100.21 A A A C5 N7 C8 A A A 10 10 10 N 2 6.17 0.50 113.80 119.97 A A A N7 C8 N9 A A A 10 10 10 N 2 -3.35 0.40 105.80 102.45 A A A C8 N9 C4 A A A 10 10 10 N 2 -3.97 0.50 104.30 100.33 A A A C5 N7 C8 G G G 11 11 11 N 2 7.01 0.50 113.10 120.11 A A A N7 C8 N9 G G G 11 11 11 N 2 -3.82 0.40 106.40 102.58 A A A C8 N9 C4 G G G 11 11 11 N 2 -3.96 0.50 104.30 100.34 A A A C5 N7 C8 G G G 16 16 16 N 2 6.89 0.50 113.10 119.99 A A A N7 C8 N9 G G G 16 16 16 N 2 -3.85 0.40 106.40 102.55 A A A C8 N9 C4 G G G 16 16 16 N 2 -4.00 0.50 104.30 100.30 A A A C5 N7 C8 G G G 17 17 17 N 2 7.03 0.50 113.10 120.13 A A A N7 C8 N9 G G G 17 17 17 N 2 -3.79 0.40 106.40 102.61 A A A C8 N9 C4 G G G 17 17 17 N 2 4.86 0.80 101.50 106.36 A A A C3' C2' C1' G G G 20 20 20 N 2 -3.93 0.50 104.30 100.37 A A A C5 N7 C8 G G G 20 20 20 N 2 6.79 0.50 113.10 119.89 A A A N7 C8 N9 G G G 20 20 20 N 2 -3.69 0.40 106.40 102.71 A A A C8 N9 C4 G G G 20 20 20 N 2 -3.58 0.50 103.90 100.32 A A A C5 N7 C8 A A A 21 21 21 N 2 6.25 0.50 113.80 120.05 A A A N7 C8 N9 A A A 21 21 21 N 2 -3.60 0.40 105.80 102.20 A A A C8 N9 C4 A A A 21 21 21 N 2 4.93 0.80 101.50 106.43 A A A C3' C2' C1' C C C 22 22 22 N 2 -4.09 0.50 104.30 100.21 A A A C5 N7 C8 G G G 23 23 23 N 2 6.90 0.50 113.10 120.00 A A A N7 C8 N9 G G G 23 23 23 N 2 -3.70 0.40 106.40 102.70 A A A C8 N9 C4 G G G 23 23 23 N 2 -3.92 0.50 104.30 100.38 A A A C5 N7 C8 G G G 24 24 24 N 2 7.06 0.50 113.10 120.16 A A A N7 C8 N9 G G G 24 24 24 N 2 -3.99 0.40 106.40 102.41 A A A C8 N9 C4 G G G 24 24 24 N 2 5.10 0.80 101.50 106.60 A A A C3' C2' C1' A A A 26 26 26 N 2 -3.80 0.50 103.90 100.10 A A A C5 N7 C8 A A A 26 26 26 N 2 6.23 0.50 113.80 120.03 A A A N7 C8 N9 A A A 26 26 26 N 2 -3.26 0.40 105.80 102.54 A A A C8 N9 C4 A A A 26 26 26 N 2 -3.74 0.50 103.90 100.16 A A A C5 N7 C8 A A A 28 28 28 N 2 6.31 0.50 113.80 120.11 A A A N7 C8 N9 A A A 28 28 28 N 2 -3.43 0.40 105.80 102.37 A A A C8 N9 C4 A A A 28 28 28 N 3 -3.95 0.50 104.30 100.35 A A A C5 N7 C8 G G G 1 1 1 N 3 7.00 0.50 113.10 120.10 A A A N7 C8 N9 G G G 1 1 1 N 3 -3.83 0.40 106.40 102.57 A A A C8 N9 C4 G G G 1 1 1 N 3 -3.88 0.50 104.30 100.42 A A A C5 N7 C8 G G G 2 2 2 N 3 6.94 0.50 113.10 120.04 A A A N7 C8 N9 G G G 2 2 2 N 3 -3.80 0.40 106.40 102.60 A A A C8 N9 C4 G G G 2 2 2 N 3 -4.04 0.50 104.30 100.26 A A A C5 N7 C8 G G G 4 4 4 N 3 7.01 0.50 113.10 120.11 A A A N7 C8 N9 G G G 4 4 4 N 3 -3.81 0.40 106.40 102.59 A A A C8 N9 C4 G G G 4 4 4 N 3 -3.84 0.50 104.30 100.46 A A A C5 N7 C8 G G G 5 5 5 N 3 7.12 0.50 113.10 120.22 A A A N7 C8 N9 G G G 5 5 5 N 3 -4.03 0.40 106.40 102.37 A A A C8 N9 C4 G G G 5 5 5 N 3 -4.14 0.50 104.30 100.16 A A A C5 N7 C8 G G G 6 6 6 N 3 6.95 0.50 113.10 120.05 A A A N7 C8 N9 G G G 6 6 6 N 3 -3.77 0.40 106.40 102.63 A A A C8 N9 C4 G G G 6 6 6 N 3 5.10 0.80 101.50 106.60 A A A C3' C2' C1' C C C 7 7 7 N 3 -4.03 0.50 104.30 100.27 A A A C5 N7 C8 G G G 8 8 8 N 3 6.79 0.50 113.10 119.89 A A A N7 C8 N9 G G G 8 8 8 N 3 -3.61 0.40 106.40 102.79 A A A C8 N9 C4 G G G 8 8 8 N 3 4.94 0.80 101.50 106.44 A A A C3' C2' C1' C C C 9 9 9 N 3 -3.75 0.50 103.90 100.15 A A A C5 N7 C8 A A A 10 10 10 N 3 6.35 0.50 113.80 120.15 A A A N7 C8 N9 A A A 10 10 10 N 3 -3.38 0.40 105.80 102.42 A A A C8 N9 C4 A A A 10 10 10 N 3 -4.01 0.50 104.30 100.29 A A A C5 N7 C8 G G G 11 11 11 N 3 6.97 0.50 113.10 120.07 A A A N7 C8 N9 G G G 11 11 11 N 3 -3.81 0.40 106.40 102.59 A A A C8 N9 C4 G G G 11 11 11 N 3 -3.86 0.50 104.30 100.44 A A A C5 N7 C8 G G G 16 16 16 N 3 7.04 0.50 113.10 120.14 A A A N7 C8 N9 G G G 16 16 16 N 3 -3.96 0.40 106.40 102.44 A A A C8 N9 C4 G G G 16 16 16 N 3 -4.03 0.50 104.30 100.27 A A A C5 N7 C8 G G G 17 17 17 N 3 6.92 0.50 113.10 120.02 A A A N7 C8 N9 G G G 17 17 17 N 3 -3.70 0.40 106.40 102.70 A A A C8 N9 C4 G G G 17 17 17 N 3 -3.99 0.50 104.30 100.31 A A A C5 N7 C8 G G G 20 20 20 N 3 6.93 0.50 113.10 120.03 A A A N7 C8 N9 G G G 20 20 20 N 3 -3.82 0.40 106.40 102.58 A A A C8 N9 C4 G G G 20 20 20 N 3 -3.61 0.50 103.90 100.29 A A A C5 N7 C8 A A A 21 21 21 N 3 6.09 0.50 113.80 119.89 A A A N7 C8 N9 A A A 21 21 21 N 3 -3.46 0.40 105.80 102.34 A A A C8 N9 C4 A A A 21 21 21 N 3 4.88 0.80 101.50 106.38 A A A C3' C2' C1' C C C 22 22 22 N 3 -4.03 0.50 104.30 100.27 A A A C5 N7 C8 G G G 23 23 23 N 3 6.99 0.50 113.10 120.09 A A A N7 C8 N9 G G G 23 23 23 N 3 -3.73 0.40 106.40 102.67 A A A C8 N9 C4 G G G 23 23 23 N 3 -4.04 0.50 104.30 100.26 A A A C5 N7 C8 G G G 24 24 24 N 3 7.10 0.50 113.10 120.20 A A A N7 C8 N9 G G G 24 24 24 N 3 -4.00 0.40 106.40 102.40 A A A C8 N9 C4 G G G 24 24 24 N 3 -3.60 0.50 103.90 100.30 A A A C5 N7 C8 A A A 26 26 26 N 3 6.18 0.50 113.80 119.98 A A A N7 C8 N9 A A A 26 26 26 N 3 -3.49 0.40 105.80 102.31 A A A C8 N9 C4 A A A 26 26 26 N 3 -3.75 0.50 103.90 100.15 A A A C5 N7 C8 A A A 28 28 28 N 3 6.27 0.50 113.80 120.07 A A A N7 C8 N9 A A A 28 28 28 N 3 -3.35 0.40 105.80 102.45 A A A C8 N9 C4 A A A 28 28 28 N 4 -4.02 0.50 104.30 100.28 A A A C5 N7 C8 G G G 1 1 1 N 4 7.05 0.50 113.10 120.15 A A A N7 C8 N9 G G G 1 1 1 N 4 -3.87 0.40 106.40 102.53 A A A C8 N9 C4 G G G 1 1 1 N 4 -3.99 0.50 104.30 100.31 A A A C5 N7 C8 G G G 2 2 2 N 4 6.99 0.50 113.10 120.09 A A A N7 C8 N9 G G G 2 2 2 N 4 -3.87 0.40 106.40 102.53 A A A C8 N9 C4 G G G 2 2 2 N 4 -4.03 0.50 104.30 100.27 A A A C5 N7 C8 G G G 4 4 4 N 4 7.00 0.50 113.10 120.10 A A A N7 C8 N9 G G G 4 4 4 N 4 -3.78 0.40 106.40 102.62 A A A C8 N9 C4 G G G 4 4 4 N 4 -3.85 0.50 104.30 100.45 A A A C5 N7 C8 G G G 5 5 5 N 4 7.02 0.50 113.10 120.12 A A A N7 C8 N9 G G G 5 5 5 N 4 -3.95 0.40 106.40 102.45 A A A C8 N9 C4 G G G 5 5 5 N 4 -4.16 0.50 104.30 100.14 A A A C5 N7 C8 G G G 6 6 6 N 4 6.69 0.50 113.10 119.79 A A A N7 C8 N9 G G G 6 6 6 N 4 -3.51 0.40 106.40 102.89 A A A C8 N9 C4 G G G 6 6 6 N 4 4.96 0.80 101.50 106.46 A A A C3' C2' C1' C C C 7 7 7 N 4 -4.04 0.50 104.30 100.26 A A A C5 N7 C8 G G G 8 8 8 N 4 6.97 0.50 113.10 120.07 A A A N7 C8 N9 G G G 8 8 8 N 4 -3.70 0.40 106.40 102.70 A A A C8 N9 C4 G G G 8 8 8 N 4 -3.71 0.50 103.90 100.19 A A A C5 N7 C8 A A A 10 10 10 N 4 6.31 0.50 113.80 120.11 A A A N7 C8 N9 A A A 10 10 10 N 4 -3.41 0.40 105.80 102.39 A A A C8 N9 C4 A A A 10 10 10 N 4 -4.07 0.50 104.30 100.23 A A A C5 N7 C8 G G G 11 11 11 N 4 7.15 0.50 113.10 120.25 A A A N7 C8 N9 G G G 11 11 11 N 4 -3.93 0.40 106.40 102.47 A A A C8 N9 C4 G G G 11 11 11 N 4 -4.04 0.50 104.30 100.26 A A A C5 N7 C8 G G G 16 16 16 N 4 6.92 0.50 113.10 120.02 A A A N7 C8 N9 G G G 16 16 16 N 4 -3.76 0.40 106.40 102.64 A A A C8 N9 C4 G G G 16 16 16 N 4 -3.88 0.50 104.30 100.42 A A A C5 N7 C8 G G G 17 17 17 N 4 7.09 0.50 113.10 120.19 A A A N7 C8 N9 G G G 17 17 17 N 4 -3.71 0.40 106.40 102.69 A A A C8 N9 C4 G G G 17 17 17 N 4 4.97 0.80 101.50 106.47 A A A C3' C2' C1' G G G 20 20 20 N 4 -4.03 0.50 104.30 100.27 A A A C5 N7 C8 G G G 20 20 20 N 4 6.90 0.50 113.10 120.00 A A A N7 C8 N9 G G G 20 20 20 N 4 -3.82 0.40 106.40 102.58 A A A C8 N9 C4 G G G 20 20 20 N 4 -3.74 0.50 103.90 100.16 A A A C5 N7 C8 A A A 21 21 21 N 4 6.37 0.50 113.80 120.17 A A A N7 C8 N9 A A A 21 21 21 N 4 -3.56 0.40 105.80 102.24 A A A C8 N9 C4 A A A 21 21 21 N 4 -3.97 0.50 104.30 100.33 A A A C5 N7 C8 G G G 23 23 23 N 4 6.96 0.50 113.10 120.06 A A A N7 C8 N9 G G G 23 23 23 N 4 -3.83 0.40 106.40 102.57 A A A C8 N9 C4 G G G 23 23 23 N 4 -4.09 0.50 104.30 100.21 A A A C5 N7 C8 G G G 24 24 24 N 4 7.00 0.50 113.10 120.10 A A A N7 C8 N9 G G G 24 24 24 N 4 -3.90 0.40 106.40 102.50 A A A C8 N9 C4 G G G 24 24 24 N 4 -3.84 0.50 103.90 100.06 A A A C5 N7 C8 A A A 26 26 26 N 4 6.32 0.50 113.80 120.12 A A A N7 C8 N9 A A A 26 26 26 N 4 -3.41 0.40 105.80 102.39 A A A C8 N9 C4 A A A 26 26 26 N 4 -3.67 0.50 103.90 100.23 A A A C5 N7 C8 A A A 28 28 28 N 4 6.12 0.50 113.80 119.92 A A A N7 C8 N9 A A A 28 28 28 N 4 -3.28 0.40 105.80 102.52 A A A C8 N9 C4 A A A 28 28 28 N 5 -3.96 0.50 104.30 100.34 A A A C5 N7 C8 G G G 1 1 1 N 5 6.98 0.50 113.10 120.08 A A A N7 C8 N9 G G G 1 1 1 N 5 -3.78 0.40 106.40 102.62 A A A C8 N9 C4 G G G 1 1 1 N 5 -4.01 0.50 104.30 100.29 A A A C5 N7 C8 G G G 2 2 2 N 5 7.02 0.50 113.10 120.12 A A A N7 C8 N9 G G G 2 2 2 N 5 -3.76 0.40 106.40 102.64 A A A C8 N9 C4 G G G 2 2 2 N 5 -4.10 0.50 104.30 100.20 A A A C5 N7 C8 G G G 4 4 4 N 5 6.88 0.50 113.10 119.98 A A A N7 C8 N9 G G G 4 4 4 N 5 -3.70 0.40 106.40 102.70 A A A C8 N9 C4 G G G 4 4 4 N 5 -3.86 0.50 104.30 100.44 A A A C5 N7 C8 G G G 5 5 5 N 5 7.10 0.50 113.10 120.20 A A A N7 C8 N9 G G G 5 5 5 N 5 -3.95 0.40 106.40 102.45 A A A C8 N9 C4 G G G 5 5 5 N 5 -4.07 0.50 104.30 100.23 A A A C5 N7 C8 G G G 6 6 6 N 5 6.84 0.50 113.10 119.94 A A A N7 C8 N9 G G G 6 6 6 N 5 -3.68 0.40 106.40 102.72 A A A C8 N9 C4 G G G 6 6 6 N 5 -4.02 0.50 104.30 100.28 A A A C5 N7 C8 G G G 8 8 8 N 5 6.97 0.50 113.10 120.07 A A A N7 C8 N9 G G G 8 8 8 N 5 -3.75 0.40 106.40 102.65 A A A C8 N9 C4 G G G 8 8 8 N 5 -3.77 0.50 103.90 100.13 A A A C5 N7 C8 A A A 10 10 10 N 5 6.31 0.50 113.80 120.11 A A A N7 C8 N9 A A A 10 10 10 N 5 -3.36 0.40 105.80 102.44 A A A C8 N9 C4 A A A 10 10 10 N 5 -3.99 0.50 104.30 100.31 A A A C5 N7 C8 G G G 11 11 11 N 5 7.00 0.50 113.10 120.10 A A A N7 C8 N9 G G G 11 11 11 N 5 -3.86 0.40 106.40 102.54 A A A C8 N9 C4 G G G 11 11 11 N 5 -4.02 0.50 104.30 100.28 A A A C5 N7 C8 G G G 16 16 16 N 5 6.96 0.50 113.10 120.06 A A A N7 C8 N9 G G G 16 16 16 N 5 -3.82 0.40 106.40 102.58 A A A C8 N9 C4 G G G 16 16 16 N 5 -3.99 0.50 104.30 100.31 A A A C5 N7 C8 G G G 17 17 17 N 5 7.02 0.50 113.10 120.12 A A A N7 C8 N9 G G G 17 17 17 N 5 -3.77 0.40 106.40 102.63 A A A C8 N9 C4 G G G 17 17 17 N 5 4.89 0.80 101.50 106.39 A A A C3' C2' C1' G G G 20 20 20 N 5 -4.06 0.50 104.30 100.24 A A A C5 N7 C8 G G G 20 20 20 N 5 7.04 0.50 113.10 120.14 A A A N7 C8 N9 G G G 20 20 20 N 5 -3.84 0.40 106.40 102.56 A A A C8 N9 C4 G G G 20 20 20 N 5 -3.56 0.50 103.90 100.34 A A A C5 N7 C8 A A A 21 21 21 N 5 6.00 0.50 113.80 119.80 A A A N7 C8 N9 A A A 21 21 21 N 5 -3.33 0.40 105.80 102.47 A A A C8 N9 C4 A A A 21 21 21 N 5 -4.08 0.50 104.30 100.22 A A A C5 N7 C8 G G G 23 23 23 N 5 6.90 0.50 113.10 120.00 A A A N7 C8 N9 G G G 23 23 23 N 5 -3.72 0.40 106.40 102.68 A A A C8 N9 C4 G G G 23 23 23 N 5 -3.90 0.50 104.30 100.40 A A A C5 N7 C8 G G G 24 24 24 N 5 7.13 0.50 113.10 120.23 A A A N7 C8 N9 G G G 24 24 24 N 5 -3.98 0.40 106.40 102.42 A A A C8 N9 C4 G G G 24 24 24 N 5 -3.72 0.50 103.90 100.18 A A A C5 N7 C8 A A A 26 26 26 N 5 6.30 0.50 113.80 120.10 A A A N7 C8 N9 A A A 26 26 26 N 5 -3.34 0.40 105.80 102.46 A A A C8 N9 C4 A A A 26 26 26 N 5 -3.69 0.50 103.90 100.21 A A A C5 N7 C8 A A A 28 28 28 N 5 6.21 0.50 113.80 120.01 A A A N7 C8 N9 A A A 28 28 28 N 5 -3.40 0.40 105.80 102.40 A A A C8 N9 C4 A A A 28 28 28 N model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 STRUCTURE OF RNA (5'-GGUGGGCGCAGCUUCGGCUGCGGUACCAC-3'), NMR, 5 STRUCTURES 1 N N hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 A C 30 A N3 C 30 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 A C 30 A O2 C 30 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 A C 30 A N4 C 30 1_555 hydrog WATSON-CRICK A G 2 A N1 G 2 1_555 A C 29 A N3 C 29 1_555 hydrog WATSON-CRICK A G 2 A N2 G 2 1_555 A C 29 A O2 C 29 1_555 hydrog WATSON-CRICK A G 2 A O6 G 2 1_555 A C 29 A N4 C 29 1_555 hydrog WATSON-CRICK A U 3 A N3 U 3 1_555 A A 28 A N1 A 28 1_555 hydrog WATSON-CRICK A U 3 A O4 U 3 1_555 A A 28 A N6 A 28 1_555 hydrog WATSON-CRICK A G 4 A N1 G 4 1_555 A C 27 A N3 C 27 1_555 hydrog WATSON-CRICK A G 4 A N2 G 4 1_555 A C 27 A O2 C 27 1_555 hydrog WATSON-CRICK A G 4 A O6 G 4 1_555 A C 27 A N4 C 27 1_555 hydrog TYPE_8_PAIR A G 5 A N1 G 5 1_555 A A 26 A N1 A 26 1_555 hydrog TYPE_8_PAIR A G 5 A O6 G 5 1_555 A A 26 A N6 A 26 1_555 hydrog TYPE_3_PAIR A G 6 A N1 G 6 1_555 A G 24 A O6 G 24 1_555 hydrog TYPE_3_PAIR A G 6 A O6 G 6 1_555 A G 24 A N1 G 24 1_555 hydrog WATSON-CRICK A C 7 A N3 C 7 1_555 A G 23 A N1 G 23 1_555 hydrog WATSON-CRICK A C 7 A N4 C 7 1_555 A G 23 A O6 G 23 1_555 hydrog WATSON-CRICK A C 7 A O2 C 7 1_555 A G 23 A N2 G 23 1_555 hydrog WATSON-CRICK A G 8 A N1 G 8 1_555 A C 22 A N3 C 22 1_555 hydrog WATSON-CRICK A G 8 A N2 G 8 1_555 A C 22 A O2 C 22 1_555 hydrog WATSON-CRICK A G 8 A O6 G 8 1_555 A C 22 A N4 C 22 1_555 hydrog WATSON-CRICK A C 9 A N3 C 9 1_555 A G 20 A N1 G 20 1_555 hydrog WATSON-CRICK A C 9 A N4 C 9 1_555 A G 20 A O6 G 20 1_555 hydrog WATSON-CRICK A C 9 A O2 C 9 1_555 A G 20 A N2 G 20 1_555 hydrog WATSON-CRICK A A 10 A N1 A 10 1_555 A U 19 A N3 U 19 1_555 hydrog WATSON-CRICK A A 10 A N6 A 10 1_555 A U 19 A O4 U 19 1_555 hydrog WATSON-CRICK A G 11 A N1 G 11 1_555 A C 18 A N3 C 18 1_555 hydrog WATSON-CRICK A G 11 A N2 G 11 1_555 A C 18 A O2 C 18 1_555 hydrog WATSON-CRICK A G 11 A O6 G 11 1_555 A C 18 A N4 C 18 1_555 hydrog WATSON-CRICK A C 12 A N3 C 12 1_555 A G 17 A N1 G 17 1_555 hydrog WATSON-CRICK A C 12 A N4 C 12 1_555 A G 17 A O6 G 17 1_555 hydrog WATSON-CRICK A C 12 A O2 C 12 1_555 A G 17 A N2 G 17 1_555 hydrog U-G MISPAIR A U 13 A O2 U 13 1_555 A G 16 A N1 G 16 1_555 RNA RIBONUCLEIC ACID, RNA 1EBR PDB 1 1EBR 1 30 1EBR 1 30 1EBR A 1 1 30 1 P 1