1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Yeagle, P.L.
Salloum, A.
Chopra, A.
Bhawsar, N.
Ali, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
DK
J.Pept.Res.
JPERFA
2150
1397-002X
55
455
465
10.1034/j.1399-3011.2000.00707.x
10888202
Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin.
2000
10.2210/pdb1eds/pdb
pdb_00001eds
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
3314.697
RHODOPSIN
FIRST INTRADISKAL LOOP (RESIDUES 93-123)
1
syn
polymer
no
no
TTLYTSLHGYFVFGPTGCNLEGFFATLGGEI
TTLYTSLHGYFVFGPTGCNLEGFFATLGGEI
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2000-08-09
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
amino terminal of bovine rhodopsin
Second intradiskal loop of bovine rhodopsin
Third intradiskal loop of bovine rhodopsin
RCSB
Y
RCSB
2000-01-28
REL
REL
bovine sequence
sample
target function
150
1
2D NOESY
DQF-COSY
1
atm
303
K
distance geometry (DIANA)
1
minimized average structure
2 mM peptide
DMSO
data analysis
Felix
refinement
DIANA
600
Bruker
AMX
THR
1
n
1
THR
1
A
THR
2
n
2
THR
2
A
LEU
3
n
3
LEU
3
A
TYR
4
n
4
TYR
4
A
THR
5
n
5
THR
5
A
SER
6
n
6
SER
6
A
LEU
7
n
7
LEU
7
A
HIS
8
n
8
HIS
8
A
GLY
9
n
9
GLY
9
A
TYR
10
n
10
TYR
10
A
PHE
11
n
11
PHE
11
A
VAL
12
n
12
VAL
12
A
PHE
13
n
13
PHE
13
A
GLY
14
n
14
GLY
14
A
PRO
15
n
15
PRO
15
A
THR
16
n
16
THR
16
A
GLY
17
n
17
GLY
17
A
CYS
18
n
18
CYS
18
A
ASN
19
n
19
ASN
19
A
LEU
20
n
20
LEU
20
A
GLU
21
n
21
GLU
21
A
GLY
22
n
22
GLY
22
A
PHE
23
n
23
PHE
23
A
PHE
24
n
24
PHE
24
A
ALA
25
n
25
ALA
25
A
THR
26
n
26
THR
26
A
LEU
27
n
27
LEU
27
A
GLY
28
n
28
GLY
28
A
GLY
29
n
29
GLY
29
A
GLU
30
n
30
GLU
30
A
ILE
31
n
31
ILE
31
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
TYR
10
0.192
SIDE CHAIN
1
A
PHE
24
0.118
SIDE CHAIN
1
A
LEU
3
57.98
-72.67
1
A
THR
5
43.26
76.16
1
A
HIS
8
-53.66
77.18
1
A
TYR
10
-76.04
41.88
1
A
PRO
15
-77.42
-81.43
1
A
THR
16
-84.72
47.30
1
A
THR
26
-72.96
-72.42
1
A
GLU
30
72.31
153.56
minimized average
SOLUTION STRUCTURE OF INTRADISKAL LOOP 1 OF BOVINE RHODOPSIN (RHODOPSIN RESIDUES 92-123)
1
N
N
A
TYR
10
A
TYR
10
HELX_P
A
GLY
14
A
GLY
14
5
1
5
Ion Transport
helix-turn-helix, Ion Transport
OPSD_BOVIN
UNP
1
93
P02699
TTLYTSLHGYFVFGPTGCNLEGFFATLGGEI
93
123
1EDS
1
31
P02699
A
1
1
31
1
P 1