1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Yeagle, P.L. Salloum, A. Chopra, A. Bhawsar, N. Ali, L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking DK J.Pept.Res. JPERFA 2150 1397-002X 55 455 465 10.1034/j.1399-3011.2000.00707.x 10888202 Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin. 2000 10.2210/pdb1edv/pdb pdb_00001edv 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 3941.338 RHODOPSIN SECOND INTRADISKAL LOOP (RESIDUES 172-205) 1 syn polymer no no LVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVI LVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVI A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2000-08-09 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name amino terminal of bovine rhodopsin first intradiskal loop of bovine rhodopsin Third intradiskal loop of bovine rhodopsin RCSB Y RCSB 2000-01-28 REL REL bovine rhodopsin sequence sample target function 150 1 2D NOESY DQF-COSY 1 atm 303 K distance geometry 1 minimized average structure 2 mM peptide DMSO data analysis Felix refinement DIANA 600 Bruker AMX LEU 1 n 1 LEU 1 A VAL 2 n 2 VAL 2 A GLY 3 n 3 GLY 3 A TRP 4 n 4 TRP 4 A SER 5 n 5 SER 5 A ARG 6 n 6 ARG 6 A TYR 7 n 7 TYR 7 A ILE 8 n 8 ILE 8 A PRO 9 n 9 PRO 9 A GLU 10 n 10 GLU 10 A GLY 11 n 11 GLY 11 A MET 12 n 12 MET 12 A GLN 13 n 13 GLN 13 A CYS 14 n 14 CYS 14 A SER 15 n 15 SER 15 A CYS 16 n 16 CYS 16 A GLY 17 n 17 GLY 17 A ILE 18 n 18 ILE 18 A ASP 19 n 19 ASP 19 A TYR 20 n 20 TYR 20 A TYR 21 n 21 TYR 21 A THR 22 n 22 THR 22 A PRO 23 n 23 PRO 23 A HIS 24 n 24 HIS 24 A GLU 25 n 25 GLU 25 A GLU 26 n 26 GLU 26 A THR 27 n 27 THR 27 A ASN 28 n 28 ASN 28 A ASN 29 n 29 ASN 29 A GLU 30 n 30 GLU 30 A SER 31 n 31 SER 31 A PHE 32 n 32 PHE 32 A VAL 33 n 33 VAL 33 A ILE 34 n 34 ILE 34 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A TYR 20 0.073 SIDE CHAIN 1 A TYR 21 0.133 SIDE CHAIN 1 A SER 5 -77.33 48.27 1 A ARG 6 -164.31 -43.85 1 A TYR 7 -76.28 -75.56 1 A MET 12 72.08 -51.31 1 A CYS 14 -82.23 44.91 1 A SER 15 -179.41 -150.01 1 A CYS 16 -160.45 -39.53 1 A ILE 18 58.44 90.97 1 A TYR 20 -67.99 -92.32 1 A HIS 24 -177.30 95.00 1 A GLU 26 -75.43 41.76 1 A THR 27 173.07 45.60 1 A ASN 28 -169.67 -58.64 1 A ASN 29 -85.07 -88.37 1 A PHE 32 -167.13 55.16 1 A VAL 33 58.64 174.79 minimized average SOLUTION STRUCTURE OF 2ND INTRADISKAL LOOP OF BOVINE RHODOPSIN (RESIDUES 172-205) 1 N N A TYR 20 A TYR 20 HELX_P A GLU 25 A GLU 25 1 1 6 Ion Transport helix-turn-helix, Ion Transport A PHE 32 A PHE 32 1 A VAL 33 A VAL 33 -24.06 OPSD_BOVIN UNP 1 172 P02699 LVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVI 172 205 1EDV 1 34 P02699 A 1 1 34 1 P 1