1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Yeagle, P.L.
Salloum, A.
Chopra, A.
Bhawsar, N.
Ali, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
DK
J.Pept.Res.
JPERFA
2150
1397-002X
55
455
465
10.1034/j.1399-3011.2000.00707.x
10888202
Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin.
2000
10.2210/pdb1edw/pdb
pdb_00001edw
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
2899.299
RHODOPSIN
THIRD INTRADISKAL LOOP (RESIDUES 268-293)
1
syn
polymer
no
no
YAGVAFYIFTHQGSDFGPIFMTIPAF
YAGVAFYIFTHQGSDFGPIFMTIPAF
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2000-08-09
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
amino terminal of bovine rhodopsin
First intradiskal loop of bovine rhodopsin
Second intradiskal loop of bovine rhodopsin
RCSB
Y
RCSB
2000-01-28
REL
REL
bovine rhodopsin
sample
target function
150
1
2D NOESY
DQF-COSY
1
atm
303
K
distance geometry
1
minimized average structure
2 mM peptide
DMSO
data analysis
Felix
structure solution
DIANA
refinement
DIANA
600
Bruker
AMX
TYR
1
n
1
TYR
1
A
ALA
2
n
2
ALA
2
A
GLY
3
n
3
GLY
3
A
VAL
4
n
4
VAL
4
A
ALA
5
n
5
ALA
5
A
PHE
6
n
6
PHE
6
A
TYR
7
n
7
TYR
7
A
ILE
8
n
8
ILE
8
A
PHE
9
n
9
PHE
9
A
THR
10
n
10
THR
10
A
HIS
11
n
11
HIS
11
A
GLN
12
n
12
GLN
12
A
GLY
13
n
13
GLY
13
A
SER
14
n
14
SER
14
A
ASP
15
n
15
ASP
15
A
PHE
16
n
16
PHE
16
A
GLY
17
n
17
GLY
17
A
PRO
18
n
18
PRO
18
A
ILE
19
n
19
ILE
19
A
PHE
20
n
20
PHE
20
A
MET
21
n
21
MET
21
A
THR
22
n
22
THR
22
A
ILE
23
n
23
ILE
23
A
PRO
24
n
24
PRO
24
A
ALA
25
n
25
ALA
25
A
PHE
26
n
26
PHE
26
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ALA
2
58.06
-105.56
1
A
ILE
8
-83.92
-153.74
1
A
THR
10
34.04
43.00
1
A
HIS
11
54.87
17.14
1
A
GLN
12
-114.40
-166.92
1
A
ASP
15
-154.76
-71.32
1
A
ILE
19
64.25
-58.62
1
A
THR
22
-134.68
-56.64
minimized average
SOLUTION STRUCTURE OF THIRD INTRADISKAL LOOP OF BOVINE RHODOPSIN (RESIDUES 268-293)
1
N
N
A
ILE
8
A
ILE
8
HELX_P
A
GLN
12
A
GLN
12
5
1
5
Ion Transport
helix-turn-helix, Ion Transport
OPSD_BOVIN
UNP
1
268
P02699
YAGVAFYIFTHQGSDFGPIFMTIPAF
268
293
1EDW
1
26
P02699
A
1
1
26
1
P 1