0.033990
0.000000
0.000000
0.000000
0.018713
0.000000
0.000000
0.000000
0.024201
0.000000
0.000000
0.000000
Cardin, C.J.
Denny, W.A.
Hobbs, J.R.
Thorpe, J.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
29.420
53.440
41.320
Co 3
58.933
COBALT (III) ION
non-polymer
C17 H17 Br N4 O
373.247
9-BROMO-PHENAZINE-1-CARBOXYLIC ACID (2-DIMETHYLAMINO-ETHYL)-AMIDE
non-polymer
Br -1
79.904
BROMIDE ION
non-polymer
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H13 N2 O8 P
308.182
y
2'-DEOXYURIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
CO
N
2
N
BR
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
N
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
Y
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
C
Y
16
N
N
N
17
N
C
N
18
N
O
N
19
N
N
N
20
N
C
N
21
N
C
N
22
N
N
N
23
N
C
N
24
N
C
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
BR
N
43
N
O
N
44
N
P
N
45
N
O
N
46
N
O
N
47
N
O
N
48
N
C
N
49
R
C
N
50
N
O
N
51
S
C
N
52
N
O
N
53
N
C
N
54
R
C
Y
55
N
N
Y
56
N
C
Y
57
N
N
Y
58
N
C
Y
59
N
C
N
60
N
N
Y
61
N
N
Y
62
N
C
Y
63
N
N
Y
64
N
C
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
O
N
80
N
P
N
81
N
O
N
82
N
O
N
83
N
O
N
84
N
C
N
85
R
C
N
86
N
O
N
87
S
C
N
88
N
O
N
89
N
C
N
90
R
C
N
91
N
N
N
92
N
C
N
93
N
O
N
94
N
N
N
95
N
C
N
96
N
N
N
97
N
C
N
98
N
C
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
O
N
114
N
P
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
O
N
121
S
C
N
122
N
O
N
123
N
C
N
124
R
C
Y
125
N
N
Y
126
N
C
Y
127
N
N
Y
128
N
C
N
129
N
C
N
130
N
O
N
131
N
N
N
132
N
C
N
133
N
N
N
134
N
N
Y
135
N
C
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
O
N
151
N
P
N
152
N
O
N
153
N
O
N
154
N
O
N
155
N
C
N
156
R
C
N
157
N
O
N
158
S
C
N
159
N
O
N
160
N
C
N
161
R
C
N
162
N
N
N
163
N
C
N
164
N
O
N
165
N
N
N
166
N
C
N
167
N
O
N
168
N
C
N
169
N
C
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
O
N
184
N
H
N
185
N
H
N
1
N
sing
Y
2
N
doub
Y
3
N
sing
N
4
N
sing
Y
5
N
sing
N
6
N
sing
Y
7
N
doub
N
8
N
sing
Y
9
N
sing
N
10
N
sing
Y
11
N
doub
Y
12
N
sing
Y
13
N
doub
Y
14
N
sing
N
15
N
sing
Y
16
N
sing
N
17
N
sing
Y
18
N
doub
N
19
N
sing
Y
20
N
sing
Y
21
N
sing
Y
22
N
doub
Y
23
N
doub
Y
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
Y
66
N
sing
Y
67
N
sing
Y
68
N
doub
N
69
N
sing
Y
70
N
sing
Y
71
N
sing
Y
72
N
doub
N
73
N
sing
Y
74
N
doub
N
75
N
sing
N
76
N
sing
Y
77
N
sing
Y
78
N
doub
N
79
N
sing
Y
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
Y
139
N
sing
Y
140
N
sing
Y
141
N
doub
N
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
39
15055
15061
10.1021/bi001749p
11106483
Guanine specific binding at a DNA junction formed by d[CG(5-BrU)ACG](2) with a topoisomerase poison in the presence of Co(2+) ions.
2000
10.2210/pdb1eg6/pdb
pdb_00001eg6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
1999-12-06
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.9000
1.0
X31
EMBL/DESY, HAMBURG
0.9000
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X31
1795.191
5'-D(*CP*GP*(BRO)UP*AP*CP*G)-3'
2
syn
polymer
58.933
COBALT (III) ION
2
syn
non-polymer
79.904
BROMIDE ION
2
syn
non-polymer
373.247
9-BROMO-PHENAZINE-1-CARBOXYLIC ACID (2-DIMETHYLAMINO-ETHYL)-AMIDE
1
syn
non-polymer
18.015
water
37
nat
water
no
no
(DC)(DG)(DU)(DA)(DC)(DG)
CGUACG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
1
2.15
42.71
VAPOR DIFFUSION, SITTING DROP
7.5
DROP: SODIUM CACODYLATE BUFFER, MAGNESIUM ACETATE, COBALT CHLORIDE, SPERMINE, MPD RESERVOIR: MPD, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 279K
279
SODIUM CACODYLATE
1
MAGNESIUM ACETATE
1
CoCl3
1
SPERMINE
1
MPD
1
MPD
2
-8.892
1
19
A
2
B
5
9.981
A_DG2:DC5_B
1
3.297
-0.642
-0.246
-0.057
3.861
1
20
A
3
B
4
-0.991
A_DU3:DA4_B
2
2.658
0.071
-0.352
-0.035
-3.117
1
20
A
4
B
3
5.705
A_DA4:DU3_B
3
-0.497
0.047
0.137
0.069
9.797
1
19
A
5
B
2
-0.488
A_DC5:DG2_B
4
9.877
0.344
-0.175
-0.161
2.850
29.341
A
A
2
3
10.908
B
B
5
4
3.025
5.491
-1.174
-0.340
AA_DG2DU3:DA4DC5_BB
1
1.478
-2.937
28.797
-1.743
2.606
3.282
37.581
A
A
3
4
2.412
B
B
4
3
3.364
1.549
0.198
-0.568
AA_DU3DA4:DU3DA4_BB
2
-5.220
8.129
37.199
-1.088
-1.002
3.144
26.215
A
A
4
5
6.583
B
B
3
2
3.209
2.971
0.091
-0.259
AA_DA4DC5:DG2DU3_BB
3
3.556
-7.880
25.810
-1.356
0.740
chem_comp_atom
chem_comp_bond
database_2
diffrn_source
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2001-01-03
1
1
2007-10-16
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-02-14
REL
3CO
COBALT (III) ION
BR
BROMIDE ION
BFA
9-BROMO-PHENAZINE-1-CARBOXYLIC ACID (2-DIMETHYLAMINO-ETHYL)-AMIDE
HOH
water
3CO
40
2
3CO
3CO
40
A
BRO
3
3
BR
BR
41
A
3CO
43
2
3CO
3CO
43
B
BRO
3
3
BR
BR
44
B
BFA
50
4
BFA
BFA
50
B
HOH
41
5
HOH
HOH
42
A
HOH
42
5
HOH
HOH
43
A
HOH
1
5
HOH
HOH
44
A
HOH
2
5
HOH
HOH
45
A
HOH
6
5
HOH
HOH
46
A
HOH
7
5
HOH
HOH
47
A
HOH
9
5
HOH
HOH
48
A
HOH
11
5
HOH
HOH
49
A
HOH
15
5
HOH
HOH
50
A
HOH
16
5
HOH
HOH
51
A
HOH
21
5
HOH
HOH
52
A
HOH
25
5
HOH
HOH
53
A
HOH
29
5
HOH
HOH
54
A
HOH
31
5
HOH
HOH
55
A
HOH
32
5
HOH
HOH
56
A
HOH
33
5
HOH
HOH
57
A
HOH
44
5
HOH
HOH
51
B
HOH
45
5
HOH
HOH
52
B
HOH
46
5
HOH
HOH
53
B
HOH
47
5
HOH
HOH
54
B
HOH
48
5
HOH
HOH
55
B
HOH
3
5
HOH
HOH
56
B
HOH
4
5
HOH
HOH
57
B
HOH
10
5
HOH
HOH
58
B
HOH
12
5
HOH
HOH
59
B
HOH
13
5
HOH
HOH
60
B
HOH
14
5
HOH
HOH
61
B
HOH
17
5
HOH
HOH
62
B
HOH
18
5
HOH
HOH
63
B
HOH
19
5
HOH
HOH
64
B
HOH
20
5
HOH
HOH
65
B
HOH
22
5
HOH
HOH
66
B
HOH
24
5
HOH
HOH
67
B
HOH
26
5
HOH
HOH
68
B
HOH
27
5
HOH
HOH
69
B
HOH
28
5
HOH
HOH
70
B
HOH
30
5
HOH
HOH
71
B
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
U
3
n
3
DU
3
A
A
4
n
4
DA
4
A
C
5
n
5
DC
5
A
G
6
n
6
DG
6
A
n
1
1
B
G
2
n
2
DG
2
B
U
3
n
3
DU
3
B
A
4
n
4
DA
4
B
C
5
n
5
DC
5
B
G
6
n
6
DG
6
B
author_defined_assembly
2
dimeric
A
DG
6
A
N7
DG
6
1_555
A
3CO
40
C
CO
3CO
1_555
A
HOH
42
H
O
HOH
1_555
81.0
A
DG
6
A
N7
DG
6
1_555
A
3CO
40
C
CO
3CO
1_555
A
HOH
43
H
O
HOH
1_555
90.1
A
HOH
42
H
O
HOH
1_555
A
3CO
40
C
CO
3CO
1_555
A
HOH
43
H
O
HOH
1_555
88.0
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
51
I
O
HOH
1_555
101.0
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
52
I
O
HOH
1_555
100.1
B
HOH
51
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
52
I
O
HOH
1_555
157.6
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
53
I
O
HOH
1_555
175.7
B
HOH
51
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
53
I
O
HOH
1_555
77.8
B
HOH
52
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
53
I
O
HOH
1_555
81.7
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
54
I
O
HOH
1_555
94.7
B
HOH
51
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
54
I
O
HOH
1_555
97.9
B
HOH
52
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
54
I
O
HOH
1_555
87.7
B
HOH
53
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
54
I
O
HOH
1_555
81.5
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
75.2
B
HOH
51
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
99.1
B
HOH
52
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
79.2
B
HOH
53
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
109.0
B
HOH
54
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
161.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
3CO
40
C
3CO
1
B
BFA
50
G
BFA
1
A
HOH
56
H
HOH
1
B
DC
1
B
DC
1
1
Y
1
A
A
C5
BR
DU
BR
3
41
1.96
1
B
B
C5
BR
DU
BR
3
44
1.96
1
9.67
1.40
114.30
123.97
A
A
A
N1
C1'
C2'
DC
DC
DC
1
1
1
N
1
-5.65
0.70
108.00
102.35
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
11.32
1.60
120.90
132.22
A
A
A
P
O5'
C5'
DU
DU
DU
3
3
3
N
1
7.37
1.10
109.80
117.17
A
A
A
C5'
C4'
O4'
DU
DU
DU
3
3
3
N
1
-4.05
0.60
125.90
121.85
A
A
A
C5
C4
O4
DU
DU
DU
3
3
3
N
1
17.67
1.20
119.70
137.37
A
A
A
C3'
O3'
P
DU
DU
DA
3
3
4
Y
1
-4.65
0.70
108.00
103.35
A
A
A
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
14.49
1.40
114.30
128.79
A
A
A
N1
C1'
C2'
DC
DC
DC
5
5
5
N
1
9.03
1.20
119.70
128.73
A
A
A
C3'
O3'
P
DC
DC
DG
5
5
6
Y
1
-7.69
0.70
108.00
100.31
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
1
9.86
1.40
114.30
124.16
B
B
B
N9
C1'
C2'
DG
DG
DG
2
2
2
N
1
-9.52
0.70
108.00
98.48
B
B
B
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
15.75
1.40
114.30
130.05
B
B
B
N1
C1'
C2'
DU
DU
DU
3
3
3
N
1
10.05
1.20
119.70
129.75
B
B
B
C3'
O3'
P
DU
DU
DA
3
3
4
Y
1
8.60
1.40
114.30
122.90
B
B
B
N9
C1'
C2'
DA
DA
DA
4
4
4
N
1
1.86
0.30
108.30
110.16
B
B
B
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
3.33
0.50
110.60
113.93
B
B
B
C2
N3
C4
DA
DA
DA
4
4
4
N
1
15.71
1.20
119.70
135.41
B
B
B
C3'
O3'
P
DA
DA
DC
4
4
5
Y
1
13.40
1.60
120.90
134.30
B
B
B
P
O5'
C5'
DC
DC
DC
5
5
5
N
1
2.74
0.40
120.30
123.04
B
B
B
C6
N1
C2
DC
DC
DC
5
5
5
N
1
9.63
1.60
120.90
130.53
B
B
B
P
O5'
C5'
DG
DG
DG
6
6
6
N
1
A
A
C1'
N9
DG
DG
2
2
0.099
0.013
1.488
1.587
N
1
A
A
O4'
C1'
DU
DU
3
3
0.072
0.011
1.420
1.492
N
1
A
A
O4'
C1'
DA
DA
4
4
0.068
0.011
1.420
1.488
N
1
A
A
O4'
C1'
DG
DG
6
6
0.074
0.011
1.420
1.494
N
1
A
A
C1'
N9
DG
DG
6
6
0.103
0.013
1.488
1.591
N
1
B
B
C1'
N9
DG
DG
2
2
0.079
0.013
1.488
1.567
N
1
B
B
O4'
C1'
DU
DU
3
3
0.066
0.011
1.420
1.486
N
1
B
B
C1'
N9
DG
DG
6
6
0.081
0.013
1.488
1.569
N
0.3469
0.2276
0.2501
0.2276
2.00
15.00
104
2091
1566
6.6
78.81
RANDOM
1
THROUGHOUT
4.
2.
0
2.00
15.00
37
309
50
222
0
29.312
2.00
15.00
1EG6
2360
1566
4.
2.
0.059
1
8.35
4.79
78.8
0.026
2.00
1.29
72.6
phasing
SOLVE
refinement
SHELXL-97
data reduction
DENZO
data scaling
CCP4
(SCALA)
CRYSTAL STRUCTURE ANALYSIS OF D(CG(5-BRU)ACG) COMPLEXES TO A PHENAZINE
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
metalc
2.079
A
DG
6
A
N7
DG
6
1_555
A
3CO
40
C
CO
3CO
1_555
metalc
2.059
A
3CO
40
C
CO
3CO
1_555
A
HOH
42
H
O
HOH
1_555
metalc
2.111
A
3CO
40
C
CO
3CO
1_555
A
HOH
43
H
O
HOH
1_555
metalc
2.064
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
metalc
2.118
B
3CO
43
E
CO
3CO
1_555
B
HOH
51
I
O
HOH
1_555
metalc
2.141
B
3CO
43
E
CO
3CO
1_555
B
HOH
52
I
O
HOH
1_555
metalc
2.105
B
3CO
43
E
CO
3CO
1_555
B
HOH
53
I
O
HOH
1_555
metalc
2.131
B
3CO
43
E
CO
3CO
1_555
B
HOH
54
I
O
HOH
1_555
metalc
2.106
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
5
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
5
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
5
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DU
3
A
N3
DU
3
1_555
B
DA
4
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DU
3
A
O4
DU
3
1_555
B
DA
4
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N1
DA
4
1_555
B
DU
3
B
N3
DU
3
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N6
DA
4
1_555
B
DU
3
B
O4
DU
3
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
2
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
2
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
2
B
N2
DG
2
1_555
DNA
DRUG-DNA COMPLEX, INTERCALATION, MAJOR GROOVE BINDING, DOUBLE HELIX, DNA
1EG6
PDB
1
1EG6
1
6
1EG6
1
6
1EG6
A
1
1
6
1
6
1EG6
1
6
1EG6
B
1
1
6
BINDING SITE FOR RESIDUE 3CO A 40
A
3CO
40
Software
6
BINDING SITE FOR RESIDUE 3CO B 43
B
3CO
43
Software
6
BINDING SITE FOR RESIDUE BR A 41
A
BR
41
Software
3
BINDING SITE FOR RESIDUE BR B 44
B
BR
44
Software
2
BINDING SITE FOR RESIDUE BFA B 50
B
BFA
50
Software
8
A
DG
6
A
DG
6
6
1_555
A
DG
6
A
DG
6
6
3_656
A
HOH
42
H
HOH
6
3_656
A
HOH
42
H
HOH
6
1_555
A
HOH
43
H
HOH
6
3_656
A
HOH
43
H
HOH
6
1_555
B
DG
2
B
DG
2
6
1_555
B
HOH
51
I
HOH
6
1_555
B
HOH
52
I
HOH
6
1_555
B
HOH
53
I
HOH
6
1_555
B
HOH
54
I
HOH
6
1_555
B
HOH
55
I
HOH
6
1_555
A
DG
2
A
DG
2
3
1_555
A
DU
3
A
DU
3
3
1_555
A
HOH
49
H
HOH
3
1_555
B
DG
2
B
DG
2
2
1_555
B
DU
3
B
DU
3
2
1_555
A
DC
1
A
DC
1
8
3_555
A
DG
2
A
DG
2
8
1_555
A
DG
2
A
DG
2
8
2_565
A
DA
4
A
DA
4
8
2_565
B
DC
5
B
DC
5
8
1_555
B
DG
6
B
DG
6
8
1_555
B
HOH
62
I
HOH
8
1_555
B
HOH
65
I
HOH
8
1_555
21
orthorhombic
C 2 2 2